assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003015715.1_ASM301571v1	CP028127	Xanthomonas vasicola pv. vasculorum strain SAM119 chromosome, complete genome	2	4333469-4336200	2,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	cas3,DEDDh,WYL,DinG,RT,cas5,cas8c,cas7,cas4,cas1,cas2	Type I-U, Type I-U?,Type I-C	GTCGCGCCCTCACGGGCGCGTGGATTGAAAC,GTCGCGCCCTCACGGGCGCGTGGATTGAAAC,GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	31,31,31	2	2	4333500-4333533|4334284-4334318	CP028127.1_4326921-4326888|CP028127.1_2459963-2459929	I-C:I-C:I-C	40,40,41	41	TypeI-U,TypeI-U?,TypeI-C	cas3,DEDDh,WYL,DinG,RT,cas5,cas8c,cas7,cas4,cas1,cas2	NA,NA	NA|316aa|up_9|CP028127.1_4319438_4320386_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|744aa|up_8|CP028127.1_4320815_4323047_-	pfam03971, IDH, Monomeric isocitrate dehydrogenase	NA|567aa|up_7|CP028127.1_4323250_4324951_+	COG4715, COG4715, Uncharacterized conserved protein [Function unknown]	cas3|765aa|up_6|CP028127.1_4325114_4327409_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|225aa|up_5|CP028127.1_4327894_4328569_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|615aa|up_4|CP028127.1_4328565_4330410_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|293aa|up_3|CP028127.1_4330406_4331285_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|211aa|up_2|CP028127.1_4331304_4331937_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|345aa|up_1|CP028127.1_4331939_4332974_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|CP028127.1_4332989_4333280_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|347aa|down_0|CP028127.1_4336267_4337308_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|267aa|down_1|CP028127.1_4337307_4338108_+	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|185aa|down_2|CP028127.1_4339749_4340304_-	PRK10856, PRK10856, cytoskeleton protein RodZ	NA|98aa|down_3|CP028127.1_4340409_4340703_-	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional	NA|272aa|down_4|CP028127.1_4340803_4341619_-	PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional	NA|439aa|down_5|CP028127.1_4341777_4343094_-	cd05667, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|415aa|down_6|CP028127.1_4343352_4344597_+	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA|1083aa|down_7|CP028127.1_4344691_4347940_+	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA|1043aa|down_8|CP028127.1_4348055_4351184_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|110aa|down_9|CP028127.1_4352091_4352421_+	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only]
GCA_003015715.1_ASM301571v1	CP028127	Xanthomonas vasicola pv. vasculorum strain SAM119 chromosome, complete genome	3	4338146-4339620	2,2,3	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	cas3,DEDDh,WYL,DinG,RT,cas5,cas8c,cas7,cas4,cas1,cas2	Type I-U, Type I-U?,Type I-C	GTCGCGCCCTCACGGGCGCGTGGATTGAAAC,GTCGCGCCCTCACGGGCGCGTGGATTGAAAC,GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	31,31,31	0	0	NA	NA	I-C:I-C:I-C	22,22,20	22	TypeI-U,TypeI-U?,TypeI-C	cas3,DEDDh,WYL,DinG,RT,cas5,cas8c,cas7,cas4,cas1,cas2	NA,NA|88aa|down_9|CP028127.1_4353852_4354116_+	NA|567aa|up_9|CP028127.1_4323250_4324951_+	COG4715, COG4715, Uncharacterized conserved protein [Function unknown]	cas3|765aa|up_8|CP028127.1_4325114_4327409_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|225aa|up_7|CP028127.1_4327894_4328569_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|615aa|up_6|CP028127.1_4328565_4330410_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|293aa|up_5|CP028127.1_4330406_4331285_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|211aa|up_4|CP028127.1_4331304_4331937_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|345aa|up_3|CP028127.1_4331939_4332974_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_2|CP028127.1_4332989_4333280_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|347aa|up_1|CP028127.1_4336267_4337308_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|267aa|up_0|CP028127.1_4337307_4338108_+	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|185aa|down_0|CP028127.1_4339749_4340304_-	PRK10856, PRK10856, cytoskeleton protein RodZ	NA|98aa|down_1|CP028127.1_4340409_4340703_-	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional	NA|272aa|down_2|CP028127.1_4340803_4341619_-	PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional	NA|439aa|down_3|CP028127.1_4341777_4343094_-	cd05667, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily	NA|415aa|down_4|CP028127.1_4343352_4344597_+	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA|1083aa|down_5|CP028127.1_4344691_4347940_+	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA|1043aa|down_6|CP028127.1_4348055_4351184_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|110aa|down_7|CP028127.1_4352091_4352421_+	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only]	NA|456aa|down_8|CP028127.1_4352467_4353835_-	cd16348, VOC_YdcJ_like, uncharacterized metal-dependent enzyme similar to Shigella flexneri YdcJ	NA|88aa|down_9|CP028127.1_4353852_4354116_+	NA
GCA_003015715.1_ASM301571v1	CP028127	Xanthomonas vasicola pv. vasculorum strain SAM119 chromosome, complete genome	4	4813327-4813432	3	CRISPRCasFinder	no		cas3,DEDDh,WYL,DinG,RT,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	GGGCACCTTCTCCCGATGGGAGAAGG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,WYL,DinG,RT,cas5,cas8c,cas7,cas4,cas1,cas2	NA,NA|69aa|down_1|CP028127.1_4815828_4816035_-	NA|185aa|up_9|CP028127.1_4791989_4792544_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|659aa|up_8|CP028127.1_4792632_4794609_-	TIGR01074, ATP-dependent_DNA_helicase_Rep, ATP-dependent DNA helicase Rep	NA|210aa|up_7|CP028127.1_4794817_4795447_+	PRK04296, PRK04296, thymidine kinase; Provisional	NA|415aa|up_6|CP028127.1_4795907_4797152_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|534aa|up_5|CP028127.1_4797318_4798920_-	PRK13273, mdoD, glucan biosynthesis protein D; Provisional	NA|368aa|up_4|CP028127.1_4798988_4800092_-	pfam14315, DUF4380, Domain of unknown function (DUF4380)	NA|272aa|up_3|CP028127.1_4800637_4801453_-	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|626aa|up_2|CP028127.1_4809274_4811152_-	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]	NA|198aa|up_1|CP028127.1_4811175_4811769_-	cd19166, HemeO-bac, heme oxygenase found in pathogenic bacteria	NA|422aa|up_0|CP028127.1_4811868_4813134_-	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|721aa|down_0|CP028127.1_4813489_4815652_-	TIGR02283, Membrane-bound_lytic_murein_transglycosylase_B, lytic murein transglycosylase	NA|69aa|down_1|CP028127.1_4815828_4816035_-	NA	NA|130aa|down_2|CP028127.1_4816253_4816643_-	PRK04233, PRK04233, hypothetical protein; Provisional	NA|274aa|down_3|CP028127.1_4816988_4817810_+	PRK10621, PRK10621, hypothetical protein; Provisional	NA|1339aa|down_4|CP028127.1_4817885_4821902_-	COG4913, COG4913, Uncharacterized protein conserved in bacteria [Function unknown]	NA|235aa|down_5|CP028127.1_4822176_4822881_-	pfam13835, DUF4194, Domain of unknown function (DUF4194)	NA|490aa|down_6|CP028127.1_4822867_4824337_-	pfam11855, DUF3375, Protein of unknown function (DUF3375)	NA|210aa|down_7|CP028127.1_4824356_4824986_-	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|151aa|down_8|CP028127.1_4825087_4825540_+	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional	NA|73aa|down_9|CP028127.1_4825629_4825848_+	pfam07869, DUF1656, Protein of unknown function (DUF1656)
