The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027570	Megasphaera elsdenii DSM 20460 strain ATCC 25940 chromosome, complete genome	2478942	1462155	1503409	2478942	portal,terminase,capsid,protease,tRNA,integrase,tail	Faecalibacterium_phage(17.65%)	57	1475871:1475886	1492951:1492966
AVO74676.1|1462155_1462893_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AVO74677.1|1462889_1463462_+	RNA methyltransferase	NA	NA	NA	NA	NA
AVO74678.1|1463476_1464211_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AVO74679.1|1464503_1464746_+	DUF1858 domain-containing protein	NA	NA	NA	NA	NA
AVO74680.1|1464771_1465365_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74681.1|1465387_1465948_+	hemerythrin	NA	NA	NA	NA	NA
AVO74682.1|1466422_1466914_+	sel1 repeat family protein	NA	NA	NA	NA	NA
AVO74683.1|1467090_1468710_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74684.1|1468862_1469141_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74685.1|1469179_1470490_+	radical SAM protein	NA	NA	NA	NA	NA
AVO74686.1|1471441_1472122_+	EcsC family protein	NA	NA	NA	NA	NA
AVO74687.1|1472136_1472343_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74688.1|1472365_1472728_+	hypothetical protein	NA	NA	NA	NA	NA
AVO75609.1|1472774_1473764_+	WYL domain-containing transcriptional regulator	NA	NA	NA	NA	NA
AVO74689.1|1475465_1476995_+	methylmalonyl-CoA carboxyltransferase	NA	NA	NA	NA	NA
1475871:1475886	attL	ATCCAGGAAGGCGTCG	NA	NA	NA	NA
AVO74690.1|1477007_1477493_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74691.1|1477528_1477936_+	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA	NA
AVO74692.1|1478311_1479388_-|integrase	site-specific integrase	integrase	A0A2H4JCB7	uncultured_Caudovirales_phage	33.5	4.1e-42
AVO75610.1|1479431_1479644_-	nuclease	NA	NA	NA	NA	NA
AVO74693.1|1479664_1480498_-	DNA damage-inducible protein D	NA	A0A1W6JPJ7	Morganella_phage	66.7	2.0e-76
AVO74694.1|1480712_1481267_-	hypothetical protein	NA	Q4ZA70	Staphylococcus_virus	30.4	1.8e-17
AVO74695.1|1481371_1482802_-	DUF4041 domain-containing protein	NA	M1NRY5	Streptococcus_phage	52.7	1.5e-68
AVO74696.1|1482838_1483453_-	XRE family transcriptional regulator	NA	A0A139ZPI6	Marinitoga_camini_virus	32.2	3.1e-18
AVO74697.1|1483628_1483829_+	XRE family transcriptional regulator	NA	A0A1B0T6B2	Bacillus_phage	45.6	2.8e-05
AVO75611.1|1483964_1484198_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74698.1|1484197_1484452_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74699.1|1484481_1484697_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74700.1|1484696_1485233_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AVO74701.1|1485484_1485745_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74702.1|1485760_1486042_+	LysM domain-containing protein	NA	NA	NA	NA	NA
AVO74703.1|1486058_1486265_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74704.1|1486266_1486542_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74705.1|1486544_1486766_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74706.1|1486919_1487663_+	ParA family protein	NA	H7BUL8	unidentified_phage	34.2	5.9e-24
AVO74707.1|1487659_1488754_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74708.1|1488740_1489292_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74709.1|1489304_1489742_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74710.1|1489981_1490824_+	hypothetical protein	NA	I2E8X7	Clostridium_phage	32.0	1.6e-28
AVO74711.1|1491049_1491241_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74712.1|1491250_1491445_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74713.1|1491441_1491897_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74714.1|1491893_1492337_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74715.1|1492536_1492725_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74716.1|1492857_1493376_+	hypothetical protein	NA	A0A0C5AN04	Bacteriophage	35.7	1.7e-14
1492951:1492966	attR	ATCCAGGAAGGCGTCG	NA	NA	NA	NA
AVO74717.1|1493372_1495283_+|terminase	terminase	terminase	A0A2K9V3X4	Faecalibacterium_phage	43.1	7.1e-138
AVO74718.1|1495291_1495510_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74719.1|1495522_1497115_+|portal	phage portal protein	portal	A0A2K9V452	Faecalibacterium_phage	40.3	1.2e-103
AVO74720.1|1497104_1498175_+|protease	Clp protease ClpP	protease	A0A067ZG37	Vibrio_phage	35.2	7.5e-36
AVO74721.1|1498174_1498510_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74722.1|1498522_1499575_+|capsid	phage capsid protein	capsid	A0A0K2FHW2	Achromobacter_phage	24.9	1.2e-06
AVO74723.1|1499586_1499829_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74724.1|1499825_1500152_+	hypothetical protein	NA	A0A0C5AJ53	Bacteriophage	35.6	2.0e-08
AVO74725.1|1500160_1500676_+	hypothetical protein	NA	A0A067ZG41	Vibrio_phage	33.3	6.2e-12
AVO74726.1|1500680_1501190_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74727.1|1501182_1501419_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74728.1|1501420_1502866_+|tail	phage tail protein	tail	A0A059WKP9	Vibrio_phage	50.4	8.1e-126
AVO74729.1|1502878_1503409_+|tail	phage tail protein	tail	A0A2K9V323	Faecalibacterium_phage	37.6	2.3e-22
>prophage 2
CP027570	Megasphaera elsdenii DSM 20460 strain ATCC 25940 chromosome, complete genome	2478942	1507455	1523236	2478942	plate,tail	Vibrio_phage(31.25%)	22	NA	NA
AVO74731.1|1507455_1507659_+|tail	phage tail protein	tail	A0A2K9V482	Faecalibacterium_phage	50.0	1.2e-11
AVO74732.1|1507663_1508830_+	transcriptional regulator	NA	A0A0C5AJ59	Bacteriophage	32.0	3.6e-44
AVO74733.1|1508819_1509284_+|plate	baseplate assembly protein	plate	A0A067ZIM2	Vibrio_phage	28.2	3.0e-10
AVO74734.1|1509292_1509763_+	hypothetical protein	NA	A0A0C5AN08	Bacteriophage	32.3	7.1e-15
AVO74735.1|1509773_1510088_+	hypothetical protein	NA	A0A067ZJ13	Vibrio_phage	46.1	5.1e-17
AVO74736.1|1510074_1511190_+|plate	baseplate assembly protein	plate	A0A0C5AEG2	Bacteriophage	47.0	7.4e-87
AVO74737.1|1511186_1512494_+|tail	phage tail protein I	tail	A0A2K9V471	Faecalibacterium_phage	38.7	1.6e-19
AVO74738.1|1512493_1514149_+	hypothetical protein	NA	G3MAG1	Bacillus_virus	22.4	1.6e-05
AVO74739.1|1514170_1514620_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74740.1|1514625_1515696_+	hypothetical protein	NA	Q8H9N0	Vibrio_phage	38.7	3.6e-62
AVO75612.1|1515804_1516104_+	diversity-generating retroelement protein Avd	NA	D4HTV8	Vibrio_phage	46.3	1.1e-18
AVO74741.1|1516037_1516304_+	hypothetical protein	NA	D4HTV9	Vibrio_phage	74.4	2.1e-08
AVO74742.1|1516425_1517502_+	RNA-dependent DNA polymerase	NA	A0A0N7AE80	Bacillus_phage	52.4	1.0e-104
AVO75613.1|1517501_1517945_+	hypothetical protein	NA	M9Q253	Clostridium_phage	47.2	1.6e-21
AVO74743.1|1517941_1518511_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A142F1B8	Bacillus_phage	37.1	1.7e-15
AVO74744.1|1518529_1518808_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74745.1|1519117_1519837_-	hypothetical protein	NA	H7BW64	unidentified_phage	46.8	2.2e-07
AVO74746.1|1520006_1520204_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74747.1|1520298_1520733_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74748.1|1520814_1521003_+	hypothetical protein	NA	NA	NA	NA	NA
AVO74749.1|1521085_1521322_+	hypothetical protein	NA	NA	NA	NA	NA
AVO75614.1|1521778_1523236_+	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	37.9	9.5e-50
>prophage 3
CP027570	Megasphaera elsdenii DSM 20460 strain ATCC 25940 chromosome, complete genome	2478942	1579020	1586230	2478942	protease	Agrobacterium_phage(16.67%)	7	NA	NA
AVO74806.1|1579020_1579617_+	ATP-dependent Clp endopeptidase, proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.7	3.1e-55
AVO74807.1|1579634_1580873_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	61.5	2.1e-143
AVO74808.1|1580945_1583279_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	43.4	5.6e-177
AVO74809.1|1583278_1583914_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
AVO74810.1|1584110_1584482_+	thioredoxin	NA	A0A2I2L415	Orpheovirus	30.4	2.1e-09
AVO74811.1|1584518_1585445_+	glycosyltransferase	NA	S5FKN0	Shigella_phage	39.7	9.6e-56
AVO74812.1|1585486_1586230_+	hypothetical protein	NA	A0A1S5SEZ8	Streptococcus_phage	34.4	9.5e-22
>prophage 4
CP027570	Megasphaera elsdenii DSM 20460 strain ATCC 25940 chromosome, complete genome	2478942	1987743	1995530	2478942	transposase	uncultured_phage(14.29%)	12	NA	NA
AVO75144.1|1987743_1988193_+	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA	S4U059	uncultured_phage	44.8	1.3e-29
AVO75145.1|1988203_1988893_+	site-specific DNA-methyltransferase	NA	A0A1C9C5F8	Heterosigma_akashiwo_virus	26.2	3.0e-14
AVO75146.1|1988915_1989134_+	hypothetical protein	NA	NA	NA	NA	NA
AVO75147.1|1989137_1989344_+	hypothetical protein	NA	H7BV51	unidentified_phage	48.5	1.2e-11
AVO75148.1|1989537_1989840_+	DUF3310 domain-containing protein	NA	W5R8R5	Staphylococcus_phage	42.3	5.0e-06
AVO75149.1|1989844_1990342_+	hypothetical protein	NA	NA	NA	NA	NA
AVO75150.1|1990334_1990787_+	hypothetical protein	NA	NA	NA	NA	NA
AVO75151.1|1990792_1991332_+	hypothetical protein	NA	NA	NA	NA	NA
AVO75152.1|1991192_1991576_+	hypothetical protein	NA	NA	NA	NA	NA
AVO75153.1|1991575_1992193_+	hypothetical protein	NA	A0A060AN10	Cronobacter_phage	41.5	3.5e-38
AVO75154.1|1992466_1994200_+	hypothetical protein	NA	Q332F0	Clostridium_botulinum_C_phage	36.0	3.2e-97
AVO75155.1|1994615_1995530_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	35.0	1.5e-40
>prophage 5
CP027570	Megasphaera elsdenii DSM 20460 strain ATCC 25940 chromosome, complete genome	2478942	2339508	2346567	2478942		Synechococcus_phage(33.33%)	6	NA	NA
AVO75437.1|2339508_2340114_-	IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	53.9	2.0e-49
AVO75438.1|2340133_2340748_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.3	1.7e-24
AVO75439.1|2340740_2341805_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D8KLC2	Synechococcus_phage	41.3	9.3e-63
AVO75440.1|2341785_2343213_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.0	4.9e-59
AVO75441.1|2343257_2343752_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	48.4	6.5e-27
AVO75442.1|2344035_2346567_+	exonuclease	NA	S5M596	Bacillus_phage	23.0	1.1e-21
