assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_003006175.1_ASM300617v1	CP024429	Klebsiella pneumoniae strain DA48896 chromosome, complete genome	1	1019657-1019796	1	CRISPRCasFinder	no	DEDDh	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	CTGCTGCTTCAGTTTTGTAGGCCGGGTAAGGCGCCAGCCGCCACCCGGCA	50	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|70aa|up_7|CP024429.1_1013402_1013612_-,NA	NA|256aa|up_9|CP024429.1_1011678_1012446_+	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|247aa|up_8|CP024429.1_1012416_1013157_-	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|70aa|up_7|CP024429.1_1013402_1013612_-	NA	NA|448aa|up_6|CP024429.1_1013568_1014912_+	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional	NA|413aa|up_5|CP024429.1_1014915_1016154_+	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional	NA|265aa|up_4|CP024429.1_1016146_1016941_+	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional	NA|213aa|up_3|CP024429.1_1016933_1017572_+	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated	NA|199aa|up_2|CP024429.1_1017578_1018175_+	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional	NA|408aa|up_1|CP024429.1_1018187_1019411_+	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional	NA|72aa|up_0|CP024429.1_1019413_1019629_+	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown]	NA|287aa|down_0|CP024429.1_1019851_1020712_-	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins	NA|352aa|down_1|CP024429.1_1020871_1021927_+	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|151aa|down_2|CP024429.1_1021929_1022382_+	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|486aa|down_3|CP024429.1_1022424_1023882_-	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|153aa|down_4|CP024429.1_1024139_1024598_+	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|415aa|down_5|CP024429.1_1024703_1025948_+	PRK05077, frsA, esterase FrsA	NA|133aa|down_6|CP024429.1_1026005_1026404_+	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|231aa|down_7|CP024429.1_1026489_1027182_-	PRK11534, PRK11534, DNA-binding transcriptional regulator CsiR; Provisional	NA|467aa|down_8|CP024429.1_1027227_1028628_-	PRK10197, PRK10197, GABA permease	NA|428aa|down_9|CP024429.1_1028777_1030061_-	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase
GCA_003006175.1_ASM300617v1	CP024429	Klebsiella pneumoniae strain DA48896 chromosome, complete genome	2	4291402-4294051	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	43,43,42	43	TypeI-E	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|674aa|up_0|CP024429.1_4289299_4291321_+,NA	NA|237aa|up_9|CP024429.1_4280856_4281567_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|106aa|up_8|CP024429.1_4281586_4281904_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|109aa|up_7|CP024429.1_4282044_4282371_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_6|CP024429.1_4282421_4283027_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_5|CP024429.1_4283026_4284454_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_4|CP024429.1_4284463_4285372_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|472aa|up_3|CP024429.1_4285381_4286797_-	PRK10637, cysG, siroheme synthase CysG	NA|352aa|up_2|CP024429.1_4287034_4288090_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|396aa|up_1|CP024429.1_4288125_4289313_+	pfam11340, DUF3142, Protein of unknown function (DUF3142)	NA|674aa|up_0|CP024429.1_4289299_4291321_+	NA	cas2|98aa|down_0|CP024429.1_4294147_4294441_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|CP024429.1_4294440_4295361_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|CP024429.1_4295357_4296008_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|CP024429.1_4295989_4296736_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|CP024429.1_4296746_4297802_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|181aa|down_5|CP024429.1_4297820_4298363_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|519aa|down_6|CP024429.1_4298359_4299916_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|888aa|down_7|CP024429.1_4299927_4302591_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|245aa|down_8|CP024429.1_4302797_4303532_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_9|CP024429.1_4303630_4305343_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
GCA_003006175.1_ASM300617v1	CP024432	Klebsiella pneumoniae strain DA48896 plasmid p48896_3, complete sequence	1	91-185	1	CRISPRCasFinder	no			Orphan	GTGGGTGGACAGGCTGGACAAAGTGGACA	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|86aa|down_0|CP024432.1_588_846_+,NA|221aa|down_3|CP024432.1_1788_2451_-,NA|70aa|down_5|CP024432.1_3321_3531_+,NA|99aa|down_6|CP024432.1_3530_3827_+,NA|98aa|down_7|CP024432.1_3823_4117_+,NA|108aa|down_8|CP024432.1_4252_4576_+,NA|99aa|down_9|CP024432.1_4568_4865_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|86aa|down_0|CP024432.1_588_846_+	NA	NA|87aa|down_1|CP024432.1_1095_1356_+	COG3077, RelB, DNA-damage-inducible protein J [DNA replication, recombination, and repair]	NA|92aa|down_2|CP024432.1_1359_1635_+	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ	NA|221aa|down_3|CP024432.1_1788_2451_-	NA	NA|176aa|down_4|CP024432.1_2783_3311_+	PHA03095, PHA03095, ankyrin-like protein; Provisional	NA|70aa|down_5|CP024432.1_3321_3531_+	NA	NA|99aa|down_6|CP024432.1_3530_3827_+	NA	NA|98aa|down_7|CP024432.1_3823_4117_+	NA	NA|108aa|down_8|CP024432.1_4252_4576_+	NA	NA|99aa|down_9|CP024432.1_4568_4865_+	NA
GCA_003006175.1_ASM300617v1	CP024432	Klebsiella pneumoniae strain DA48896 plasmid p48896_3, complete sequence	2	45075-45169	2	CRISPRCasFinder	no			Orphan	TGTCCACTTTGTCCAGTCTGTCCACCCAC	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,DinG,csa3,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|101aa|up_8|CP024432.1_41381_41684_+,NA|129aa|up_7|CP024432.1_41788_42175_+,NA|102aa|up_6|CP024432.1_42220_42526_+,NA|92aa|up_5|CP024432.1_42516_42792_+,NA|64aa|up_4|CP024432.1_42908_43100_+,NA|100aa|up_3|CP024432.1_43113_43413_+,NA|73aa|up_2|CP024432.1_43412_43631_+,NA|195aa|up_1|CP024432.1_43652_44237_+,NA|86aa|up_0|CP024432.1_44413_44671_-,NA	NA|235aa|up_9|CP024432.1_40620_41325_+	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|101aa|up_8|CP024432.1_41381_41684_+	NA	NA|129aa|up_7|CP024432.1_41788_42175_+	NA	NA|102aa|up_6|CP024432.1_42220_42526_+	NA	NA|92aa|up_5|CP024432.1_42516_42792_+	NA	NA|64aa|up_4|CP024432.1_42908_43100_+	NA	NA|100aa|up_3|CP024432.1_43113_43413_+	NA	NA|73aa|up_2|CP024432.1_43412_43631_+	NA	NA|195aa|up_1|CP024432.1_43652_44237_+	NA	NA|86aa|up_0|CP024432.1_44413_44671_-	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
