assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_002966875.1_ASM296687v1	CP025211	Klebsiella pneumoniae strain HZW25 chromosome, complete genome	1	72181-73242	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,RT,cas3,DEDDh,DinG,WYL	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	4	4	72515-72546|72576-72607|72881-72912|73064-73095	CP025211.1_1015130-1015161|CP025211.1_2911680-2911711|CP025211.1_725473-725442|CP025212.1_130377-130408	I-E:I-E:I-E	15,17,16	17	TypeI-E	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,RT,cas3,DEDDh,DinG,WYL	NA,NA	NA|600aa|up_9|CP025211.1_59090_60890_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_8|CP025211.1_60889_62602_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_7|CP025211.1_62700_63435_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas8e|519aa|up_6|CP025211.1_66315_67872_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|181aa|up_5|CP025211.1_67868_68411_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|CP025211.1_68429_69485_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|CP025211.1_69495_70242_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|CP025211.1_70223_70874_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|CP025211.1_70870_71791_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|CP025211.1_71790_72084_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|674aa|down_0|CP025211.1_73322_75344_-	cd18422, BTB_POZ_KCNG3, BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium voltage-gated channel subfamily G member 3 (KCNG3)	NA|396aa|down_1|CP025211.1_75330_76518_-	pfam11340, DUF3142, Protein of unknown function (DUF3142)	NA|352aa|down_2|CP025211.1_76553_77609_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|472aa|down_3|CP025211.1_77846_79262_+	PRK10637, cysG, siroheme synthase CysG	NA|303aa|down_4|CP025211.1_79271_80180_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_5|CP025211.1_80189_81617_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_6|CP025211.1_81616_82222_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|109aa|down_7|CP025211.1_82272_82599_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|106aa|down_8|CP025211.1_82739_83057_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_9|CP025211.1_83076_83787_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase
GCA_002966875.1_ASM296687v1	CP025211	Klebsiella pneumoniae strain HZW25 chromosome, complete genome	2	3166694-3166833	2	CRISPRCasFinder	no	DEDDh	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,RT,cas3,DEDDh,DinG,WYL	Unclear	TGCCGGGTGGCGGCTGGCGCCTTACCCGGCCTACAAAACCGAAGCAGCAG	50	0	0	NA	NA	NA	1	1	Orphan	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,RT,cas3,DEDDh,DinG,WYL	NA,NA|70aa|down_6|CP025211.1_3172878_3173088_+	NA|428aa|up_9|CP025211.1_3155105_3156389_+	PRK08088, PRK08088, 4-aminobutyrate--2-oxoglutarate transaminase	NA|467aa|up_8|CP025211.1_3156538_3157939_+	PRK10197, PRK10197, GABA permease	NA|231aa|up_7|CP025211.1_3157984_3158677_+	PRK11534, PRK11534, DNA-binding transcriptional regulator CsiR; Provisional	NA|133aa|up_6|CP025211.1_3158762_3159161_-	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|415aa|up_5|CP025211.1_3159218_3160463_-	PRK05077, frsA, esterase FrsA	NA|153aa|up_4|CP025211.1_3160568_3161027_-	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|151aa|up_3|CP025211.1_3162783_3163236_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|352aa|up_2|CP025211.1_3163238_3164294_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|407aa|up_1|CP025211.1_3164387_3165608_+	pfam01610, DDE_Tnp_ISL3, Transposase	NA|287aa|up_0|CP025211.1_3165777_3166638_+	cd08580, GDPD_Rv2277c_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins	NA|72aa|down_0|CP025211.1_3166860_3167076_-	COG2991, COG2991, Uncharacterized protein conserved in bacteria [Function unknown]	NA|408aa|down_1|CP025211.1_3167078_3168302_-	PRK05464, PRK05464, Na(+)-translocating NADH-quinone reductase subunit F; Provisional	NA|213aa|down_2|CP025211.1_3168918_3169557_-	PRK09292, PRK09292, Na(+)-translocating NADH-quinone reductase subunit D; Validated	NA|265aa|down_3|CP025211.1_3169549_3170344_-	PRK05346, PRK05346, Na(+)-translocating NADH-quinone reductase subunit C; Provisional	NA|413aa|down_4|CP025211.1_3170336_3171575_-	PRK05349, PRK05349, Na(+)-translocating NADH-quinone reductase subunit B; Provisional	NA|448aa|down_5|CP025211.1_3171578_3172922_-	PRK05352, PRK05352, Na(+)-translocating NADH-quinone reductase subunit A; Provisional	NA|70aa|down_6|CP025211.1_3172878_3173088_+	NA	NA|247aa|down_7|CP025211.1_3173333_3174074_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|256aa|down_8|CP025211.1_3174044_3174812_-	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|194aa|down_9|CP025211.1_3174886_3175468_-	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase
GCA_002966875.1_ASM296687v1	CP025211	Klebsiella pneumoniae strain HZW25 chromosome, complete genome	3	3383909-3384003	3	CRISPRCasFinder	no		cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,RT,cas3,DEDDh,DinG,WYL	Orphan	ACTATGGTTTTTATGGTTTTTATT	24	0	0	NA	NA	NA	1	1	Orphan	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,RT,cas3,DEDDh,DinG,WYL	NA|63aa|up_1|CP025211.1_3382238_3382427_+,NA|46aa|down_9|CP025211.1_3395023_3395161_-	NA|282aa|up_9|CP025211.1_3370124_3370970_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|570aa|up_8|CP025211.1_3371307_3373017_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_7|CP025211.1_3373027_3374530_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|up_6|CP025211.1_3374667_3375363_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|786aa|up_5|CP025211.1_3375538_3377896_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|up_4|CP025211.1_3378083_3380990_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|up_3|CP025211.1_3381002_3381662_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|180aa|up_2|CP025211.1_3381736_3382276_-	TIGR03124, citrate_citX, holo-ACP synthase CitX	NA|63aa|up_1|CP025211.1_3382238_3382427_+	NA	NA|455aa|up_0|CP025211.1_3382455_3383820_-	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family	NA|542aa|down_0|CP025211.1_3384144_3385770_+	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|233aa|down_1|CP025211.1_3385759_3386458_+	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|276aa|down_2|CP025211.1_3386490_3387318_-	PRK09430, djlA, co-chaperone DjlA	NA|429aa|down_3|CP025211.1_3389963_3391250_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_4|CP025211.1_3391255_3392245_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_5|CP025211.1_3392241_3393063_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|126aa|down_6|CP025211.1_3393065_3393443_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|283aa|down_7|CP025211.1_3393447_3394296_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|down_8|CP025211.1_3394547_3395027_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|46aa|down_9|CP025211.1_3395023_3395161_-	NA
GCA_002966875.1_ASM296687v1	CP025215	Klebsiella pneumoniae strain HZW25 plasmid unnamed4, complete sequence	1	4102-4196	1	CRISPRCasFinder	no			Orphan	AAAAATCTTCTCACCTTACGTGAAAAATC	29	1	1	4131-4167	CP025215.1_49364-49400	NA	1	1	Orphan	cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,RT,cas3,DEDDh,DinG,WYL	NA|62aa|up_1|CP025215.1_918_1104_-,NA|62aa|up_0|CP025215.1_1013_1199_+,NA|60aa|down_1|CP025215.1_7605_7785_+,NA|182aa|down_2|CP025215.1_8615_9161_+,NA|83aa|down_7|CP025215.1_15913_16162_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|62aa|up_1|CP025215.1_918_1104_-	NA	NA|62aa|up_0|CP025215.1_1013_1199_+	NA	NA|81aa|down_0|CP025215.1_7109_7352_+	TIGR03830, transcriptional_regulator_XRE_family, putative zinc finger/helix-turn-helix protein, YgiT family	NA|60aa|down_1|CP025215.1_7605_7785_+	NA	NA|182aa|down_2|CP025215.1_8615_9161_+	NA	NA|170aa|down_3|CP025215.1_10677_11187_+	cd09894, NGN_SP_AnfA1, N-Utilization Substance G (NusG) N-terminal domain in the NusG Specialized Paralog (SP), AnFA1	NA|215aa|down_4|CP025215.1_11418_12063_+	cd16892, LT_VirB1-like, VirB1-like subfamily	NA|97aa|down_5|CP025215.1_12046_12337_+	pfam04956, TrbC, TrbC/VIRB2 family	NA|257aa|down_6|CP025215.1_15125_15896_+	pfam07996, T4SS, Type IV secretion system proteins	NA|83aa|down_7|CP025215.1_15913_16162_+	NA	NA|352aa|down_8|CP025215.1_16173_17229_+	pfam04610, TrbL, TrbL/VirB6 plasmid conjugal transfer protein	NA|243aa|down_9|CP025215.1_17423_18152_+	cd16424, VirB8, periplasmic domain of VirB8 protein
