assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_002952975.1_ASM295297v1	CP026327	Salmonella enterica subsp. enterica serovar Kentucky strain PU131 chromosome, complete genome	1	84628-84722	1	CRISPRCasFinder	no		cas3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	Orphan	ACCGGGTCTACTGGCTCAGGGTCTAC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	NA|31aa|up_5|CP026327.1_79705_79798_+,NA|160aa|up_4|CP026327.1_79998_80478_+,NA|38aa|up_2|CP026327.1_82004_82118_+,NA|155aa|up_0|CP026327.1_83038_83503_+,NA	NA|310aa|up_9|CP026327.1_73662_74592_+	PRK09956, PRK09956, ISNCY family transposase	NA|301aa|up_8|CP026327.1_74634_75537_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|232aa|up_7|CP026327.1_76042_76738_+	PRK15385, PRK15385, MgtC family protein	NA|909aa|up_6|CP026327.1_76957_79684_+	PRK15122, PRK15122, magnesium-transporting ATPase; Provisional	NA|31aa|up_5|CP026327.1_79705_79798_+	NA	NA|160aa|up_4|CP026327.1_79998_80478_+	NA	NA|227aa|up_3|CP026327.1_80706_81387_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|38aa|up_2|CP026327.1_82004_82118_+	NA	NA|286aa|up_1|CP026327.1_82170_83028_+	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|155aa|up_0|CP026327.1_83038_83503_+	NA	NA|235aa|down_0|CP026327.1_85275_85980_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|235aa|down_1|CP026327.1_86736_87441_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|235aa|down_2|CP026327.1_88176_88881_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|131aa|down_3|CP026327.1_89340_89733_-	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|235aa|down_4|CP026327.1_92078_92783_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|272aa|down_5|CP026327.1_92972_93788_-	cd05150, APH, Aminoglycoside 3'-phosphotransferase	NA|235aa|down_6|CP026327.1_93938_94643_+	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|186aa|down_7|CP026327.1_96366_96924_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|287aa|down_8|CP026327.1_97106_97967_+	PRK15442, PRK15442, beta-lactamase TEM; Provisional	NA|131aa|down_9|CP026327.1_99157_99550_+	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle
GCA_002952975.1_ASM295297v1	CP026327	Salmonella enterica subsp. enterica serovar Kentucky strain PU131 chromosome, complete genome	3	1030992-1033095	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	Type I-E	GTATTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTNTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	33,34,34	34	TypeI-E	cas3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	NA,NA|57aa|down_2|CP026327.1_1034368_1034539_+,NA|116aa|down_6|CP026327.1_1039435_1039783_+	NA|179aa|up_9|CP026327.1_1019534_1020071_-	PRK15260, PRK15260, fimbrial protein SteF; Provisional	NA|157aa|up_8|CP026327.1_1020067_1020538_-	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional	NA|169aa|up_7|CP026327.1_1020552_1021059_-	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional	NA|258aa|up_6|CP026327.1_1021078_1021852_-	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional	NA|900aa|up_5|CP026327.1_1021864_1024564_-	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein	NA|196aa|up_4|CP026327.1_1024643_1025231_-	PRK15261, PRK15261, fimbrial protein SteA; Provisional	NA|267aa|up_3|CP026327.1_1025841_1026642_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_2|CP026327.1_1026869_1028507_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_1|CP026327.1_1028589_1029888_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_0|CP026327.1_1030023_1030695_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|down_0|CP026327.1_1033192_1033990_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|down_1|CP026327.1_1034077_1034440_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|57aa|down_2|CP026327.1_1034368_1034539_+	NA	NA|600aa|down_3|CP026327.1_1034863_1036663_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_4|CP026327.1_1036662_1038375_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_5|CP026327.1_1038450_1039185_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|116aa|down_6|CP026327.1_1039435_1039783_+	NA	NA|318aa|down_7|CP026327.1_1040360_1041314_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|900aa|down_8|CP026327.1_1041697_1044397_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|512aa|down_9|CP026327.1_1044754_1046290_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1
GCA_002952975.1_ASM295297v1	CP026327	Salmonella enterica subsp. enterica serovar Kentucky strain PU131 chromosome, complete genome	4	1050727-1052707	2,4,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	32,32,32	32	TypeI-E	cas3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	NA|116aa|up_9|CP026327.1_1039435_1039783_+,NA	NA|116aa|up_9|CP026327.1_1039435_1039783_+	NA	NA|318aa|up_8|CP026327.1_1040360_1041314_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|900aa|up_7|CP026327.1_1041697_1044397_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|512aa|up_6|CP026327.1_1044754_1046290_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|201aa|up_5|CP026327.1_1046306_1046909_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|355aa|up_4|CP026327.1_1046925_1047990_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|242aa|up_3|CP026327.1_1047999_1048725_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|235aa|up_2|CP026327.1_1048724_1049429_+	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas1|306aa|up_1|CP026327.1_1049428_1050346_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|CP026327.1_1050348_1050642_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|349aa|down_0|CP026327.1_1052721_1053768_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|CP026327.1_1054018_1054927_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|CP026327.1_1054936_1056376_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|CP026327.1_1056362_1056968_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|119aa|down_4|CP026327.1_1056985_1057342_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|CP026327.1_1057532_1057844_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|CP026327.1_1057862_1058573_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|CP026327.1_1058572_1059052_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|CP026327.1_1059048_1060098_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|CP026327.1_1060078_1060840_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
