assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_002951875.1_ASM295187v1	CP019651	Paenibacillus larvae subsp. larvae strain ERIC_I chromosome, complete genome	3	2033614-2034052	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no		cas14j,csa3,c2c10_CAS-V-U3,cas3,DEDDh,cas2,cas1,cas4,cas5,cas7b,cas8b1,WYL,DinG,cmr3gr5,cas10,cmr1gr7,PD-DExK	Orphan	GTCGCATCCTACGCGGATGCGTGGATTGAAAT,GTCGCATCCTACGCGGATGCGTGGATTGAAAT,GTCGCATCCTACGCGGATGNCGTGGATTGAAAT	32,32,33	0	0	NA	NA	I-C:I-C:NA	4,5,6	6	Orphan	cas14j,csa3,c2c10_CAS-V-U3,cas3,DEDDh,cas2,cas1,cas4,cas5,cas7b,cas8b1,WYL,DinG,cmr3gr5,cas10,cmr1gr7,PD-DExK	NA|64aa|up_3|CP019651.1_2032019_2032211_+,NA|142aa|up_2|CP019651.1_2032372_2032798_+,NA|65aa|up_1|CP019651.1_2032826_2033021_+,NA|48aa|up_0|CP019651.1_2033136_2033280_+,NA	NA|194aa|up_9|CP019651.1_2026513_2027095_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|289aa|up_8|CP019651.1_2027189_2028056_+	cd13713, PBP2_Cystine_like_1, Substrate binding domain of putative ABC transporters involved in cystine import; the type 2 periplasmic binding protein fold	NA|249aa|up_7|CP019651.1_2028757_2029504_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|141aa|up_6|CP019651.1_2029548_2029971_+	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones]	NA|70aa|up_5|CP019651.1_2030255_2030465_+	PRK02866, PRK02866, cyanate hydratase; Validated	NA|48aa|up_4|CP019651.1_2030713_2030857_-	pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily	NA|64aa|up_3|CP019651.1_2032019_2032211_+	NA	NA|142aa|up_2|CP019651.1_2032372_2032798_+	NA	NA|65aa|up_1|CP019651.1_2032826_2033021_+	NA	NA|48aa|up_0|CP019651.1_2033136_2033280_+	NA	NA|187aa|down_0|CP019651.1_2034332_2034893_-	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|211aa|down_1|CP019651.1_2035162_2035795_+	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family	NA|97aa|down_2|CP019651.1_2036787_2037078_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|107aa|down_3|CP019651.1_2037668_2037989_-	pfam13518, HTH_28, Helix-turn-helix domain	NA|100aa|down_4|CP019651.1_2038046_2038346_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|209aa|down_5|CP019651.1_2038436_2039063_-	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|119aa|down_6|CP019651.1_2039475_2039832_-	cd10451, GIY-YIG_LuxR_like, GIY-YIG domain of LuxR and ArsR family transcriptional regulators, and uncharacterized hypothetical proteins found in bacteria	NA|253aa|down_7|CP019651.1_2039852_2040611_-	pfam09860, DUF2087, Uncharacterized protein conserved in bacteria (DUF2087)	NA|185aa|down_8|CP019651.1_2041199_2041754_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|983aa|down_9|CP019651.1_2043253_2046202_+	COG3383, COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only]
GCA_002951875.1_ASM295187v1	CP019651	Paenibacillus larvae subsp. larvae strain ERIC_I chromosome, complete genome	4	2036300-2036665	2,4,2	CRT,CRISPRCasFinder,PILER-CR	no		cas14j,csa3,c2c10_CAS-V-U3,cas3,DEDDh,cas2,cas1,cas4,cas5,cas7b,cas8b1,WYL,DinG,cmr3gr5,cas10,cmr1gr7,PD-DExK	Orphan	TGTCGCATCCTACGCGGATGCGTGGATTGAAAT,GTCGCATCCTACGCGGATGCGTGGATTGAAAT,TGTCGCATCCTACGCGGATGCGTGGATTGAAAT	33,32,33	2	2	2036399-2036433|2036399-2036434	CP019651.1_2650347-2650313|CP019651.1_2650347-2650312	I-C:I-C:I-C	5,5,3	5	Orphan	cas14j,csa3,c2c10_CAS-V-U3,cas3,DEDDh,cas2,cas1,cas4,cas5,cas7b,cas8b1,WYL,DinG,cmr3gr5,cas10,cmr1gr7,PD-DExK	NA|64aa|up_5|CP019651.1_2032019_2032211_+,NA|142aa|up_4|CP019651.1_2032372_2032798_+,NA|65aa|up_3|CP019651.1_2032826_2033021_+,NA|48aa|up_2|CP019651.1_2033136_2033280_+,NA	NA|249aa|up_9|CP019651.1_2028757_2029504_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|141aa|up_8|CP019651.1_2029548_2029971_+	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones]	NA|70aa|up_7|CP019651.1_2030255_2030465_+	PRK02866, PRK02866, cyanate hydratase; Validated	NA|48aa|up_6|CP019651.1_2030713_2030857_-	pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily	NA|64aa|up_5|CP019651.1_2032019_2032211_+	NA	NA|142aa|up_4|CP019651.1_2032372_2032798_+	NA	NA|65aa|up_3|CP019651.1_2032826_2033021_+	NA	NA|48aa|up_2|CP019651.1_2033136_2033280_+	NA	NA|187aa|up_1|CP019651.1_2034332_2034893_-	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|211aa|up_0|CP019651.1_2035162_2035795_+	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family	NA|97aa|down_0|CP019651.1_2036787_2037078_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|107aa|down_1|CP019651.1_2037668_2037989_-	pfam13518, HTH_28, Helix-turn-helix domain	NA|100aa|down_2|CP019651.1_2038046_2038346_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|209aa|down_3|CP019651.1_2038436_2039063_-	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|119aa|down_4|CP019651.1_2039475_2039832_-	cd10451, GIY-YIG_LuxR_like, GIY-YIG domain of LuxR and ArsR family transcriptional regulators, and uncharacterized hypothetical proteins found in bacteria	NA|253aa|down_5|CP019651.1_2039852_2040611_-	pfam09860, DUF2087, Uncharacterized protein conserved in bacteria (DUF2087)	NA|185aa|down_6|CP019651.1_2041199_2041754_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|983aa|down_7|CP019651.1_2043253_2046202_+	COG3383, COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only]	NA|164aa|down_8|CP019651.1_2046204_2046696_+	COG2427, COG2427, Uncharacterized conserved protein [Function unknown]	NA|268aa|down_9|CP019651.1_2046712_2047516_+	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD
GCA_002951875.1_ASM295187v1	CP019651	Paenibacillus larvae subsp. larvae strain ERIC_I chromosome, complete genome	5	2969951-2970243	5,3,3	CRISPRCasFinder,CRT,PILER-CR	no	csa3,cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1	cas14j,csa3,c2c10_CAS-V-U3,cas3,DEDDh,cas2,cas1,cas4,cas5,cas7b,cas8b1,WYL,DinG,cmr3gr5,cas10,cmr1gr7,PD-DExK	 Type I-B?,Type I-B,Type I-A	AGTTTCAATACACCATGTGTTACTGTCAAAC,AGTTTCAATACACCATGTGTTACTGTCAAAC,AGTTTCAATACACCATGTGTTACTGTCAAAC	31,31,31	0	0	NA	NA	NA:NA:NA	4,4,4	4	TypeI-B?,TypeI-B,TypeI-A	cas14j,csa3,c2c10_CAS-V-U3,cas3,DEDDh,cas2,cas1,cas4,cas5,cas7b,cas8b1,WYL,DinG,cmr3gr5,cas10,cmr1gr7,PD-DExK	NA|111aa|up_7|CP019651.1_2963514_2963847_-,NA|99aa|up_2|CP019651.1_2967915_2968212_+,cas8b1|636aa|down_6|CP019651.1_2976814_2978722_-,NA|235aa|down_7|CP019651.1_2978742_2979447_-,NA|41aa|down_8|CP019651.1_2980389_2980512_+,NA|121aa|down_9|CP019651.1_2981230_2981593_-	NA|196aa|up_9|CP019651.1_2962208_2962796_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|94aa|up_8|CP019651.1_2963045_2963327_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|111aa|up_7|CP019651.1_2963514_2963847_-	NA	NA|90aa|up_6|CP019651.1_2964165_2964435_+	COG2336, MazE, Growth regulator [Signal transduction mechanisms]	NA|111aa|up_5|CP019651.1_2964428_2964761_+	PRK09907, PRK09907, endoribonuclease MazF	csa3|97aa|up_4|CP019651.1_2965012_2965303_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|837aa|up_3|CP019651.1_2965299_2967810_+	TIGR03385, Coenzyme_A_disulfide_reductase, CoA-disulfide reductase	NA|99aa|up_2|CP019651.1_2967915_2968212_+	NA	NA|96aa|up_1|CP019651.1_2968728_2969016_+	pfam01527, HTH_Tnp_1, Transposase	NA|272aa|up_0|CP019651.1_2969063_2969879_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|94aa|down_0|CP019651.1_2970420_2970702_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|337aa|down_1|CP019651.1_2970709_2971720_-	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas4|165aa|down_2|CP019651.1_2971739_2972234_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|893aa|down_3|CP019651.1_2972230_2974909_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|267aa|down_4|CP019651.1_2975022_2975823_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|321aa|down_5|CP019651.1_2975859_2976822_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|636aa|down_6|CP019651.1_2976814_2978722_-	NA	NA|235aa|down_7|CP019651.1_2978742_2979447_-	NA	NA|41aa|down_8|CP019651.1_2980389_2980512_+	NA	NA|121aa|down_9|CP019651.1_2981230_2981593_-	NA
GCA_002951875.1_ASM295187v1	CP019651	Paenibacillus larvae subsp. larvae strain ERIC_I chromosome, complete genome	6	2979794-2980022	6	CRISPRCasFinder	no	csa3,cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1	cas14j,csa3,c2c10_CAS-V-U3,cas3,DEDDh,cas2,cas1,cas4,cas5,cas7b,cas8b1,WYL,DinG,cmr3gr5,cas10,cmr1gr7,PD-DExK	 Type I-B?,Type I-B,Type I-A	GTTTCAATACACCTCGTGTTACTATCAAAC	30	0	0	NA	NA	NA	3	3	TypeI-B?,TypeI-B,TypeI-A	cas14j,csa3,c2c10_CAS-V-U3,cas3,DEDDh,cas2,cas1,cas4,cas5,cas7b,cas8b1,WYL,DinG,cmr3gr5,cas10,cmr1gr7,PD-DExK	cas8b1|636aa|up_1|CP019651.1_2976814_2978722_-,NA|235aa|up_0|CP019651.1_2978742_2979447_-,NA|41aa|down_0|CP019651.1_2980389_2980512_+,NA|121aa|down_1|CP019651.1_2981230_2981593_-,NA|39aa|down_3|CP019651.1_2982522_2982639_-,NA|84aa|down_5|CP019651.1_2983679_2983931_-	NA|96aa|up_9|CP019651.1_2968728_2969016_+	pfam01527, HTH_Tnp_1, Transposase	NA|272aa|up_8|CP019651.1_2969063_2969879_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|94aa|up_7|CP019651.1_2970420_2970702_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|337aa|up_6|CP019651.1_2970709_2971720_-	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas4|165aa|up_5|CP019651.1_2971739_2972234_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas3|893aa|up_4|CP019651.1_2972230_2974909_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|267aa|up_3|CP019651.1_2975022_2975823_-	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas7b|321aa|up_2|CP019651.1_2975859_2976822_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|636aa|up_1|CP019651.1_2976814_2978722_-	NA	NA|235aa|up_0|CP019651.1_2978742_2979447_-	NA	NA|41aa|down_0|CP019651.1_2980389_2980512_+	NA	NA|121aa|down_1|CP019651.1_2981230_2981593_-	NA	NA|84aa|down_2|CP019651.1_2982039_2982291_+	PRK03103, PRK03103, DNA polymerase IV; Reviewed	NA|39aa|down_3|CP019651.1_2982522_2982639_-	NA	NA|96aa|down_4|CP019651.1_2983329_2983617_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|84aa|down_5|CP019651.1_2983679_2983931_-	NA	NA|338aa|down_6|CP019651.1_2984288_2985302_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|170aa|down_7|CP019651.1_2985305_2985815_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|551aa|down_8|CP019651.1_2986132_2987785_+	COG3664, XynB, Beta-xylosidase [Carbohydrate transport and metabolism]	NA|389aa|down_9|CP019651.1_2987969_2989136_+	cd08021, M20_Acy1_YhaA-like, M20 Peptidase aminoacylase 1 subfamily, includes Bacillus subtilis YhaA and Staphylococcus aureus amidohydrolase, SACOL0085
