The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP012389	Lactobacillus amylovorus strain JBD401 chromosome, complete genome	1946267	870413	954072	1946267	protease,integrase,tRNA,transposase	Virus_Rctr41k(12.5%)	59	889555:889569	953214:953228
AUX15774.1|870413_871730_+|tRNA	methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase	tRNA	NA	NA	NA	NA
AUX15775.1|871729_872638_+	recombinase XerC	NA	A0A1P8DJJ6	Virus_Rctr41k	26.1	5.6e-16
AUX15776.1|872647_873172_+|protease	ATP-dependent protease	protease	NA	NA	NA	NA
AUX15777.1|873183_874581_+|protease	ATP-dependent protease	protease	A0A1B2IB03	Erwinia_phage	24.9	2.6e-28
AUX15778.1|874720_875617_+	aldose epimerase	NA	NA	NA	NA	NA
AUX15779.1|875713_876982_+	PTS lactose transporter subunit IIBC	NA	NA	NA	NA	NA
AUX15780.1|876978_877836_+	acyltransferase	NA	NA	NA	NA	NA
AUX15781.1|877878_878688_-|integrase	integrase	integrase	NA	NA	NA	NA
AUX15782.1|878892_879282_+	chromosome condensation protein CrcB	NA	NA	NA	NA	NA
AUX15783.1|879283_879661_+	camphor resistance protein CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	33.6	7.2e-10
AUX15784.1|879702_881103_-	dipeptidase PepV	NA	NA	NA	NA	NA
AUX15785.1|881281_881770_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15786.1|882333_882531_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15787.1|882566_882881_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15788.1|883045_884518_-	amino acid permease	NA	NA	NA	NA	NA
AUX15789.1|884755_886849_+	ornithine decarboxylase	NA	NA	NA	NA	NA
AUX15790.1|886867_888130_+	aluminum resistance protein	NA	NA	NA	NA	NA
AUX15791.1|888236_888908_-	potassium transporter Trk	NA	NA	NA	NA	NA
AUX15792.1|888900_890241_-	ATP synthase subunit J	NA	NA	NA	NA	NA
889555:889569	attL	CGTTAAAGCAAAACG	NA	NA	NA	NA
AUX15793.1|890352_892119_+	ATP-dependent DNA helicase RecQ	NA	A0A1V0SBK0	Catovirus	41.3	5.7e-81
AUX15794.1|892212_892665_+	transcriptional regulator	NA	NA	NA	NA	NA
AUX15795.1|892807_893791_+	homocysteine methyltransferase	NA	NA	NA	NA	NA
AUX15796.1|894876_896001_+	penicillin-binding protein	NA	A0A1D8EXR7	Mycobacterium_phage	25.9	1.4e-05
AUX15797.1|896903_897461_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15798.1|897536_898742_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15799.1|898983_899337_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15800.1|900014_900185_+	trehalose hydrolase	NA	NA	NA	NA	NA
AUX15801.1|900372_901818_+	amino acid permease	NA	NA	NA	NA	NA
AUX15802.1|902258_903806_+	conjugal transfer protein	NA	NA	NA	NA	NA
AUX15803.1|903881_904994_-	capsule biosynthesis protein	NA	NA	NA	NA	NA
AUX15804.1|905060_905954_+	phospho-beta-glycosidase	NA	NA	NA	NA	NA
AUX15805.1|906001_906445_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15806.1|912097_913006_+	CRISPR-associated protein Cas1	NA	NA	NA	NA	NA
AUX15807.1|912983_913289_+	CRISPR-associated protein Cas2	NA	NA	NA	NA	NA
AUX15808.1|916381_917314_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
AUX15809.1|917447_918092_+	NAD(P)H-dependent quinone reductase	NA	NA	NA	NA	NA
AUX15810.1|918148_918679_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15811.1|926337_926568_+	copper-binding protein	NA	NA	NA	NA	NA
AUX15812.1|926567_927119_+	DNA-binding protein	NA	NA	NA	NA	NA
AUX15813.1|927137_927767_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
AUX15814.1|927893_928646_+	GNAT family acetyltransferase	NA	NA	NA	NA	NA
AUX15815.1|929330_930749_+	ATPase	NA	NA	NA	NA	NA
AUX15816.1|930749_932300_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15817.1|932247_933273_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15818.1|933880_934225_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15819.1|934507_934687_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15820.1|934743_935139_+	hypothetical protein	NA	NA	NA	NA	NA
AUX16661.1|935199_936990_+	ATP-dependent exonuclease	NA	NA	NA	NA	NA
AUX15821.1|940616_941027_-	hypothetical protein	NA	NA	NA	NA	NA
AUX15822.1|941201_942974_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15823.1|943101_944289_+	amidohydrolase	NA	NA	NA	NA	NA
AUX15824.1|946226_946640_-	hypothetical protein	NA	NA	NA	NA	NA
AUX15825.1|946700_947735_-|transposase	transposase	transposase	Q9MBM9	Staphylococcus_prophage	31.8	1.5e-33
AUX15826.1|948302_948635_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15827.1|948653_949703_-|integrase	integrase	integrase	H7BWC8	unidentified_phage	33.7	9.2e-47
AUX15828.1|950179_951298_+	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	NA	A0A218MNE0	uncultured_virus	40.1	3.0e-72
AUX15829.1|951478_951952_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
AUX15830.1|952060_952876_+	HAD family hydrolase	NA	NA	NA	NA	NA
AUX15831.1|952890_954072_+|protease	serine protease	protease	NA	NA	NA	NA
953214:953228	attR	CGTTAAAGCAAAACG	NA	NA	NA	NA
>prophage 2
CP012389	Lactobacillus amylovorus strain JBD401 chromosome, complete genome	1946267	1120262	1160960	1946267	tail,terminase,head,capsid	Lactobacillus_phage(86.49%)	55	NA	NA
AUX15954.1|1120262_1120601_+	enterolysin	NA	Q6SEC2	Lactobacillus_prophage	44.3	1.4e-12
AUX15955.1|1120708_1121236_+	methionine sulfoxide reductase A	NA	NA	NA	NA	NA
AUX15956.1|1121666_1122791_-	lysin	NA	L0P6H6	Lactobacillus_phage	77.0	5.2e-165
AUX16669.1|1122865_1123261_-	hypothetical protein	NA	L0P6Z4	Lactobacillus_phage	71.4	4.8e-41
AUX15957.1|1123275_1123521_-	hypothetical protein	NA	L0P6E4	Lactobacillus_phage	67.6	2.5e-19
AUX15958.1|1123504_1123714_-	hypothetical protein	NA	L0P8N8	Lactobacillus_phage	68.1	4.9e-08
AUX15959.1|1123731_1124136_-	hypothetical protein	NA	NA	NA	NA	NA
AUX15960.1|1124095_1124275_-	hypothetical protein	NA	L0P7C5	Lactobacillus_phage	66.7	7.3e-13
AUX15961.1|1124276_1124876_-	hypothetical protein	NA	L0P6H5	Lactobacillus_phage	88.1	2.1e-88
AUX15962.1|1124975_1125308_-	hypothetical protein	NA	NA	NA	NA	NA
AUX15963.1|1125368_1125743_-	hypothetical protein	NA	NA	NA	NA	NA
AUX15964.1|1126190_1127141_-	hypothetical protein	NA	L0P6E1	Lactobacillus_phage	40.7	1.5e-43
AUX15965.1|1127115_1128243_-	hypothetical protein	NA	L0P6E1	Lactobacillus_phage	74.7	6.6e-75
AUX16670.1|1129964_1130378_-	hypothetical protein	NA	L0P6H1	Lactobacillus_phage	89.1	3.4e-61
AUX16671.1|1130403_1130766_-	hypothetical protein	NA	L0P6Y6	Lactobacillus_phage	90.1	4.3e-52
AUX15966.1|1131789_1132491_-	hypothetical protein	NA	L0P8M9	Lactobacillus_phage	85.6	2.0e-106
AUX16672.1|1132494_1132968_-	hypothetical protein	NA	L0P7B8	Lactobacillus_phage	84.7	2.6e-57
AUX15967.1|1135009_1135249_-	hypothetical protein	NA	L0P6G7	Lactobacillus_phage	98.3	2.0e-13
AUX15968.1|1135497_1135914_-	hypothetical protein	NA	L0P6Y3	Lactobacillus_phage	99.3	4.9e-68
AUX15969.1|1135926_1136403_-|tail	phage tail protein	tail	L0P6D4	Lactobacillus_phage	96.1	7.5e-81
AUX15970.1|1137892_1138093_-	hypothetical protein	NA	L0P7B3	Lactobacillus_phage	65.7	1.5e-14
AUX15971.1|1138061_1138487_-	hypothetical protein	NA	L0P6G4	Lactobacillus_phage	95.7	1.6e-74
AUX15972.1|1138483_1138885_-	hypothetical protein	NA	X2CXN4	Lactobacillus_phage	54.9	3.9e-38
AUX15973.1|1138881_1139244_-	hypothetical protein	NA	A9D9T8	Lactobacillus_prophage	69.2	2.2e-40
AUX15974.1|1139240_1139612_-	hypothetical protein	NA	L0P6D1	Lactobacillus_phage	92.7	8.3e-59
AUX15975.1|1139629_1140706_-|capsid	capsid protein	capsid	L0P8M2	Lactobacillus_phage	95.5	1.8e-191
AUX15976.1|1140720_1141260_-|capsid	phage capsid protein	capsid	L0P7B0	Lactobacillus_phage	93.9	3.0e-86
AUX15977.1|1141580_1141847_-	hypothetical protein	NA	NA	NA	NA	NA
AUX15978.1|1141846_1143229_-|head	phage head protein	head	A9D9S7	Lactobacillus_prophage	60.2	4.8e-120
AUX15979.1|1144633_1145920_-|terminase	terminase	terminase	X2CYF4	Lactobacillus_phage	70.1	1.7e-175
AUX15980.1|1145906_1146389_-	hypothetical protein	NA	L0P6X1	Lactobacillus_phage	85.3	1.7e-67
AUX15981.1|1146461_1147004_-	hypothetical protein	NA	A0A090DC14	Clostridium_phage	27.8	3.1e-06
AUX15982.1|1147072_1147372_-	hypothetical protein	NA	NA	NA	NA	NA
AUX15983.1|1147356_1147920_-	hypothetical protein	NA	NA	NA	NA	NA
AUX15984.1|1148493_1148937_-	hypothetical protein	NA	Q6SEE2	Lactobacillus_prophage	62.9	2.4e-44
AUX15985.1|1149066_1149618_-	hypothetical protein	NA	L0P8Q7	Lactobacillus_phage	59.0	6.0e-05
AUX15986.1|1149604_1149946_-	VRR-NUC domain protein	NA	L0P7E5	Lactobacillus_phage	78.9	1.6e-45
AUX15987.1|1149994_1150177_-	hypothetical protein	NA	NA	NA	NA	NA
AUX15988.1|1150180_1150366_-	hypothetical protein	NA	NA	NA	NA	NA
AUX15989.1|1152220_1152466_+	hypothetical protein	NA	NA	NA	NA	NA
AUX15990.1|1152448_1152706_-	hypothetical protein	NA	NA	NA	NA	NA
AUX15991.1|1152698_1153499_-	DNA primase	NA	U3PBE3	Lactobacillus_phage	65.2	1.3e-88
AUX15992.1|1153500_1153809_-	hypothetical protein	NA	NA	NA	NA	NA
AUX15993.1|1153824_1154412_-	hypothetical protein	NA	U3PDN3	Lactobacillus_phage	48.7	2.6e-43
AUX15994.1|1154414_1155167_-	NTP-binding protein	NA	U3PIS9	Lactobacillus_phage	60.0	1.1e-73
AUX15995.1|1155168_1155357_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AUX15996.1|1155434_1155752_+	hypothetical protein	NA	E9LUT2	Lactobacillus_phage	29.0	2.4e-06
AUX15997.1|1155748_1155931_-	hypothetical protein	NA	NA	NA	NA	NA
AUX15998.1|1155927_1157199_-	DEAD/DEAH box helicase	NA	U3PFS7	Lactobacillus_phage	58.0	1.3e-135
AUX15999.1|1157316_1157676_-	hypothetical protein	NA	NA	NA	NA	NA
AUX16000.1|1157678_1157909_-	hypothetical protein	NA	NA	NA	NA	NA
AUX16001.1|1157905_1158289_-	hypothetical protein	NA	NA	NA	NA	NA
AUX16002.1|1158288_1158765_-	hypothetical protein	NA	A0A0A1EL06	Lactobacillus_phage	41.5	1.5e-25
AUX16003.1|1159038_1159347_-	hypothetical protein	NA	NA	NA	NA	NA
AUX16004.1|1160177_1160960_-	antirepressor	NA	L0P8P6	Lactobacillus_phage	69.0	5.7e-94
>prophage 3
CP012389	Lactobacillus amylovorus strain JBD401 chromosome, complete genome	1946267	1614963	1623731	1946267		Prochlorococcus_phage(33.33%)	9	NA	NA
AUX16347.1|1614963_1615560_-	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	34.1	7.4e-25
AUX16348.1|1615569_1616607_-	phosphoribosylaminoimidazole synthetase	NA	Q58MH8	Prochlorococcus_phage	41.2	5.5e-60
AUX16349.1|1616608_1618060_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.2	1.6e-60
AUX16350.1|1618035_1620264_-	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	39.7	2.7e-144
AUX16351.1|1620260_1620932_-	phosphoribosylformylglycinamidine synthase	NA	NA	NA	NA	NA
AUX16352.1|1620928_1621183_-	phosphoribosylformylglycinamidine synthase	NA	NA	NA	NA	NA
AUX16353.1|1621183_1621900_-	phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	38.7	1.3e-39
AUX16354.1|1622104_1623280_-	phosphoribosylaminoimidazole carboxylase	NA	NA	NA	NA	NA
AUX16355.1|1623245_1623731_-	N5-carboxyaminoimidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.8	1.4e-21
