The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026647	Vibrio cholerae O1 biovar El Tor strain HC1037 chromosome I, complete sequence	3015116	92125	154224	3015116	integrase,transposase	Escherichia_phage(16.67%)	60	152759:152772	154475:154488
AVH50843.1|92125_95104_+|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
AVH50844.1|95218_95410_+	hypothetical protein	NA	A0A2I7RTF0	Vibrio_phage	50.0	1.8e-09
AVH50845.1|95521_97015_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
AVH50846.1|97045_97930_+	DUF3363 domain-containing protein	NA	NA	NA	NA	NA
AVH50847.1|98146_99361_+	chloramphenicol/florfenicol efflux MFS transporter FloR	NA	S4TR35	Salmonella_phage	28.7	4.2e-19
AVH50848.1|99388_99694_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AVH50849.1|99805_100345_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
AVH50850.1|100316_101153_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA	NA
AVH50851.1|101152_101956_-	APH(3'') family aminoglycoside O-phosphotransferase	NA	Q75ZG1	Hepacivirus	34.3	3.8e-24
AVH50852.1|102016_102832_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA	NA
AVH50853.1|104646_105858_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	51.4	4.2e-51
AVH50854.1|107444_108215_+	hypothetical protein	NA	NA	NA	NA	NA
AVH50855.1|108249_109065_+	abortive phage resistance protein	NA	NA	NA	NA	NA
AVH50856.1|109186_111337_+	phosphohydrolase	NA	NA	NA	NA	NA
AVH50857.1|111385_113206_+	conjugal transfer protein	NA	NA	NA	NA	NA
AVH50858.1|113215_113776_+	conjugative transfer protein	NA	NA	NA	NA	NA
AVH50859.1|113762_114398_+	DUF4400 domain-containing protein	NA	NA	NA	NA	NA
AVH50860.1|114424_115012_-	plasmid-related protein	NA	NA	NA	NA	NA
AVH50861.1|115025_115265_-	hypothetical protein	NA	NA	NA	NA	NA
AVH50862.1|115300_115582_+	type IV conjugative transfer system protein TraL	NA	NA	NA	NA	NA
AVH50863.1|115578_116205_+	pilus assembly protein	NA	NA	NA	NA	NA
AVH53419.1|116188_117085_+	hypothetical protein	NA	NA	NA	NA	NA
AVH50864.1|117087_118377_+	conjugal transfer protein TraB	NA	NA	NA	NA	NA
AVH50865.1|118373_119024_+	conjugal transfer protein TraV	NA	NA	NA	NA	NA
AVH50866.1|119020_119407_+	hypothetical protein	NA	NA	NA	NA	NA
AVH53420.1|119627_120419_+	hypothetical protein	NA	NA	NA	NA	NA
AVH50867.1|120411_121350_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
AVH50868.1|121481_122174_+	DsbC family protein	NA	NA	NA	NA	NA
AVH50869.1|122173_124573_+	type IV secretion system protein TraC	NA	NA	NA	NA	NA
AVH50870.1|124565_124913_+	plasmid-related protein	NA	NA	NA	NA	NA
AVH53421.1|124989_125409_+	S26 family signal peptidase	NA	NA	NA	NA	NA
AVH50871.1|125419_126544_+	pilus assembly protein	NA	NA	NA	NA	NA
AVH50872.1|126527_127556_+	conjugal transfer protein TraU	NA	NA	NA	NA	NA
AVH50873.1|127558_131251_+	conjugal transfer protein TraN	NA	NA	NA	NA	NA
AVH53422.1|131341_132907_-	ATPase	NA	NA	NA	NA	NA
AVH50874.1|133037_133793_-	ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	36.9	5.5e-33
AVH53423.1|133782_135282_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
AVH50875.1|135389_136406_-	hypothetical protein	NA	NA	NA	NA	NA
AVH50876.1|136636_137320_-	deoxyribonuclease I	NA	NA	NA	NA	NA
AVH50877.1|137428_138031_-	hypothetical protein	NA	NA	NA	NA	NA
AVH50878.1|138398_138725_+	plasmid-related protein	NA	NA	NA	NA	NA
AVH50879.1|138740_139160_+	single-stranded DNA-binding protein	NA	A0A0R6PHK0	Moraxella_phage	41.4	1.9e-19
AVH50880.1|139239_140058_+	phage recombination protein Bet	NA	A0A0N7C1T0	Escherichia_phage	53.5	1.4e-53
AVH50881.1|140343_141360_+	endonuclease	NA	U6C712	Ralstonia_phage	37.4	5.3e-07
AVH50882.1|141569_142529_+	CbbQ/NirQ/NorQ/GpvN family protein	NA	L7TKP0	Rhizobium_phage	35.0	6.5e-31
AVH50883.1|142528_143296_+	hypothetical protein	NA	NA	NA	NA	NA
AVH50884.1|143394_144348_+	DUF3150 domain-containing protein	NA	NA	NA	NA	NA
AVH50885.1|144409_144850_+	hypothetical protein	NA	NA	NA	NA	NA
AVH50886.1|144919_146575_+	VWA domain-containing protein	NA	L7TNG1	Rhizobium_phage	30.2	4.9e-10
AVH50887.1|146659_147157_+	DNA repair protein RadC	NA	NA	NA	NA	NA
AVH50888.1|147156_147498_+	plasmid-related protein	NA	NA	NA	NA	NA
AVH50889.1|147588_148662_+	DNA primase	NA	NA	NA	NA	NA
AVH50890.1|148751_149459_+	hypothetical protein	NA	NA	NA	NA	NA
AVH50891.1|149730_150135_+	glyoxalase	NA	NA	NA	NA	NA
AVH50892.1|150131_150833_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AVH53424.1|150932_151229_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
AVH50893.1|151365_151776_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AVH50894.1|151973_152369_-	hypothetical protein	NA	NA	NA	NA	NA
AVH50895.1|152503_152977_-	trimethoprim-resistant dihydrofolate reductase DfrA1	NA	A0A140HLG8	Bacillus_phage	34.4	1.6e-19
152759:152772	attL	GTTCTCATTGTCAG	NA	NA	NA	NA
AVH50896.1|153264_154224_+|integrase	integron integrase	integrase	R4TQT9	Mycobacterium_phage	45.0	7.0e-09
AVH50896.1|153264_154224_+|integrase	integron integrase	integrase	R4TQT9	Mycobacterium_phage	45.0	7.0e-09
154475:154488	attR	CTGACAATGAGAAC	NA	NA	NA	NA
>prophage 2
CP026647	Vibrio cholerae O1 biovar El Tor strain HC1037 chromosome I, complete sequence	3015116	262444	269637	3015116		Faustovirus(16.67%)	9	NA	NA
AVH50986.1|262444_263659_+	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	30.5	1.1e-32
AVH50987.1|263695_264079_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.2	5.4e-53
AVH50988.1|264139_264463_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	50.5	3.0e-25
AVH50989.1|264511_265027_+	co-chaperone protein HscB	NA	NA	NA	NA	NA
AVH50990.1|265050_266901_+	chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.1	5.3e-106
AVH50991.1|266914_267253_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
AVH50992.1|267301_267496_+	Fe-S assembly protein IscX	NA	NA	NA	NA	NA
AVH50993.1|267715_269005_+	peptidase B	NA	Q6GYZ8	Mycoplasma_phage	34.3	1.7e-34
AVH50994.1|269208_269637_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	38.4	1.0e-20
>prophage 3
CP026647	Vibrio cholerae O1 biovar El Tor strain HC1037 chromosome I, complete sequence	3015116	1024987	1040277	3015116	transposase	Vibrio_phage(42.11%)	22	NA	NA
AVH51637.1|1024987_1025362_-	cholera enterotoxin subunit B	NA	B9V4E7	Vibrio_virus	100.0	1.0e-64
AVH51638.1|1025358_1026135_-	enterotoxin	NA	A0A142I6Y0	Vibrio_phage	100.0	1.3e-151
AVH51639.1|1026240_1027440_-	Zona occludens toxin	NA	A0A142I6Z1	Vibrio_phage	100.0	5.3e-240
AVH51640.1|1027436_1027730_-	hypothetical protein	NA	A0A0F6YNQ7	Vibrio_phage	100.0	3.7e-46
AVH51641.1|1027726_1029010_-	hypothetical protein	NA	A0A142I701	Vibrio_phage	100.0	9.1e-222
AVH51642.1|1029020_1029269_-	colonization factor	NA	A0A0N7F140	Vibrio_phage	100.0	8.8e-33
AVH51643.1|1029404_1029785_-	hypothetical protein	NA	A0A0N9HJ67	Vibrio_phage	100.0	4.0e-69
AVH51644.1|1029762_1030842_-	replication initiation factor family protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
AVH51645.1|1030967_1031306_+	transcriptional regulator	NA	U5TNA1	Satellite_phage	100.0	7.3e-54
AVH51646.1|1031646_1031799_+	lipoate--protein ligase	NA	B1B6U1	Vibrio_virus	100.0	4.0e-20
AVH51647.1|1031817_1032042_-	RstC protein	NA	U5TMI6	Satellite_phage	100.0	1.1e-34
AVH51648.1|1032135_1032510_-	hypothetical protein	NA	B9V3G5	Vibrio_virus	100.0	1.2e-68
AVH51649.1|1032487_1033567_-	replication initiation factor family protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
AVH51650.1|1033692_1034031_+	transcriptional regulator	NA	U5TNA1	Satellite_phage	100.0	7.3e-54
AVH51651.1|1034371_1034524_+	lipoate--protein ligase	NA	B1B6U1	Vibrio_virus	98.0	2.0e-19
AVH51652.1|1034520_1035105_-	DNA-binding protein	NA	E3U9I9	Vibrio_phage	100.0	6.4e-114
AVH51653.1|1035097_1035265_-	helicase	NA	E3U9J0	Vibrio_phage	100.0	2.3e-13
AVH51654.1|1035342_1036035_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AVH51655.1|1036164_1036449_-	hypothetical protein	NA	NA	NA	NA	NA
AVH51656.1|1036453_1038019_-	replication protein	NA	A7BJY2	Enterobacteria_phage	32.3	3.9e-57
AVH51657.1|1038180_1038747_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AVH51658.1|1039055_1040277_+|transposase	IS3-like element ISVch4 family transposase	transposase	Q716C2	Shigella_phage	65.1	1.5e-117
>prophage 4
CP026647	Vibrio cholerae O1 biovar El Tor strain HC1037 chromosome I, complete sequence	3015116	1390952	1397852	3015116	tail,transposase	Vibrio_phage(83.33%)	11	NA	NA
AVH51955.1|1390952_1391159_-	AlpA family transcriptional regulator	NA	A0A1V0E8E5	Vibrio_phage	51.9	1.9e-09
AVH51956.1|1391272_1391749_+	DNA repair protein RadC	NA	NA	NA	NA	NA
AVH51957.1|1391978_1392674_-	chemotaxis protein	NA	A0A2I7S9D9	Vibrio_phage	35.4	1.2e-18
AVH51958.1|1392670_1393848_-|transposase	IS3-like element ISVch4 family transposase	transposase	Q716C2	Shigella_phage	65.1	1.5e-117
AVH51959.1|1393890_1394931_-|tail	phage tail tape measure protein	tail	A0A2I7S9D9	Vibrio_phage	72.5	2.6e-126
AVH51960.1|1395065_1395425_-	hypothetical protein	NA	A0A2I7S9E0	Vibrio_phage	67.8	3.7e-40
AVH51961.1|1395473_1395851_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
AVH51962.1|1395905_1396484_-	glyoxalase	NA	NA	NA	NA	NA
AVH51963.1|1396502_1396823_-	transcriptional regulator	NA	NA	NA	NA	NA
AVH51964.1|1396809_1397184_-	transcriptional regulator	NA	NA	NA	NA	NA
AVH51965.1|1397585_1397852_-	regulator of ribonuclease activity A	NA	M1Q554	Vibrio_phage	33.8	1.4e-07
>prophage 5
CP026647	Vibrio cholerae O1 biovar El Tor strain HC1037 chromosome I, complete sequence	3015116	1876678	1883295	3015116		Staphylococcus_phage(66.67%)	7	NA	NA
AVH52405.1|1876678_1877149_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.7	6.8e-34
AVH52406.1|1877413_1878523_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.8	6.7e-64
AVH52407.1|1878563_1879217_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	38.2	1.2e-31
AVH52408.1|1879221_1880325_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.1	1.3e-43
AVH52409.1|1880350_1880800_-	transcriptional regulator NrdR	NA	NA	NA	NA	NA
AVH52410.1|1880899_1882153_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	49.5	5.0e-100
AVH52411.1|1882161_1883295_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.4e-64
>prophage 6
CP026647	Vibrio cholerae O1 biovar El Tor strain HC1037 chromosome I, complete sequence	3015116	2957091	2964354	3015116		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
AVH53361.1|2957091_2957883_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.6	8.4e-69
AVH53362.1|2957875_2958502_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	2.0e-36
AVH53363.1|2958501_2959437_+	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	34.7	7.8e-05
AVH53364.1|2959510_2960518_+	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.2	6.0e-35
AVH53365.1|2960610_2963199_-	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.0	2.2e-33
AVH53366.1|2963466_2964354_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	41.1	4.1e-56
