The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026614	Clostridioides difficile strain R2 chromosome, complete genome	4093145	277442	293625	4093145		Synechococcus_phage(23.08%)	14	NA	NA
AVD40142.1|277442_277955_-	nitroreductase family protein	NA	A0A1V0E011	Clostridioides_phage	87.6	1.7e-83
AVD40143.1|278404_278881_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.8	3.1e-26
AVD40144.1|278886_279585_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	43.9	1.5e-45
AVD40145.1|279596_280964_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.0	1.2e-49
AXL65752.1|280957_282034_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	42.8	2.9e-64
AVD40146.1|282027_282621_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.9	3.6e-24
AVD40147.1|282613_284146_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	E3SNU8	Prochlorococcus_phage	49.7	2.3e-38
AVD40148.1|284156_285407_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
AVD40149.1|285431_289238_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	24.1	1.2e-30
AVD40150.1|289441_290314_+	dTDP-4-dehydrorhamnose reductase	NA	H9NCE8	Sphingomonas_phage	29.0	3.3e-13
AVD40151.1|290422_291292_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	61.5	6.2e-97
AVD40152.1|291340_291898_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.6	7.5e-48
AVD40153.1|291935_292919_+	dTDP-glucose 4,6-dehydratase	NA	A0A291LAD7	Escherichia_phage	47.1	3.8e-79
AVD40154.1|292956_293625_+	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	46.9	4.1e-24
>prophage 2
CP026614	Clostridioides difficile strain R2 chromosome, complete genome	4093145	572224	646296	4093145	transposase,coat,protease,tRNA	Streptococcus_phage(25.0%)	60	NA	NA
AVD40389.1|572224_572941_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
AVD40390.1|573019_574330_+	methylase	NA	NA	NA	NA	NA
AVD40391.1|574429_574966_+	signal peptidase I	NA	NA	NA	NA	NA
AVD40392.1|575131_575668_+	signal peptidase I	NA	NA	NA	NA	NA
AVD40393.1|575677_576433_+	endonuclease	NA	NA	NA	NA	NA
AVD40394.1|576506_578174_+	nucleoside kinase	NA	NA	NA	NA	NA
AVD40395.1|578755_579685_+	glutaminase	NA	NA	NA	NA	NA
AVD40396.1|579782_580346_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AVD40397.1|580828_581665_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.5	2.8e-30
AVD40398.1|581947_582943_+	aldo/keto reductase	NA	NA	NA	NA	NA
AVD40399.1|583176_583581_-	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA	NA
AVD40400.1|584338_585253_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
AVD40401.1|585358_587596_+	ATP-binding protein	NA	A0A2H4UU76	Bodo_saltans_virus	33.7	6.9e-07
AVD41349.1|588033_588651_+	endonuclease III	NA	NA	NA	NA	NA
AVD40402.1|588844_589315_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
AVD40403.1|589349_590198_+	DegV family protein	NA	NA	NA	NA	NA
AVD40404.1|590485_591490_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVD40405.1|592597_593716_+|transposase	transposase	transposase	A0A0H3UZC2	Geobacillus_virus	52.7	1.4e-109
AVD40406.1|594764_595526_+	hypothetical protein	NA	NA	NA	NA	NA
AVD40407.1|595528_596347_+	hypothetical protein	NA	NA	NA	NA	NA
AVD40408.1|596525_597128_+	DUF445 family protein	NA	NA	NA	NA	NA
AVD40409.1|597920_599840_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	39.9	1.8e-144
AVD40410.1|600564_601656_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
AVD40411.1|602003_602201_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AVD40412.1|602560_603901_+	ATP-binding protein	NA	X5JAC0	Clostridium_phage	39.7	1.4e-79
AVD40413.1|604242_604812_-	hydrolase	NA	NA	NA	NA	NA
AVD40414.1|604972_606223_-	MFS transporter	NA	NA	NA	NA	NA
AVD40415.1|606231_606465_-	hypothetical protein	NA	NA	NA	NA	NA
AVD40416.1|606515_607103_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AVD40417.1|607394_608855_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AVD40418.1|609223_609829_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXL65753.1|609831_612399_+	pyruvate, phosphate dikinase	NA	A0A1V0SGR7	Hokovirus	39.2	3.5e-47
AVD40419.1|612391_612556_+	hypothetical protein	NA	NA	NA	NA	NA
AVD40420.1|612658_614743_-	EAL domain-containing protein	NA	G3MA91	Bacillus_virus	26.6	2.9e-07
AVD41350.1|614790_616020_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AVD40421.1|616021_617203_-	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	26.0	6.6e-09
AVD40422.1|618329_618605_+	hypothetical protein	NA	NA	NA	NA	NA
AVD40423.1|618624_618912_+	hypothetical protein	NA	NA	NA	NA	NA
AVD40424.1|619331_621848_+	ATP-binding protein	NA	NA	NA	NA	NA
AVD40425.1|621862_627073_+	hypothetical protein	NA	NA	NA	NA	NA
AVD40426.1|627585_627777_-	hypothetical protein	NA	NA	NA	NA	NA
AVD40427.1|627970_628159_+	hypothetical protein	NA	NA	NA	NA	NA
AVD40428.1|628328_628769_-	DUF3788 domain-containing protein	NA	NA	NA	NA	NA
AVD40429.1|629103_630417_+	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	41.5	3.3e-94
AVD40430.1|630434_630971_+	chromosome partitioning protein ParB	NA	A0A220GKT8	Streptococcus_phage	69.7	2.1e-63
AVD40431.1|631468_631690_+|coat	spore coat associated protein CotJA	coat	NA	NA	NA	NA
AVD40432.1|631689_631953_+|coat	spore coat protein CotJB	coat	NA	NA	NA	NA
AVD40433.1|632016_632589_+	manganese catalase family protein	NA	NA	NA	NA	NA
AVD40434.1|633380_634034_+	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA	NA
AVD40435.1|634195_634729_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	49.4	5.9e-34
AVD40436.1|636531_636945_+	DUF3795 domain-containing protein	NA	NA	NA	NA	NA
AVD40437.1|637018_637555_+	GrpB family protein	NA	NA	NA	NA	NA
AVD40438.1|637715_639290_+	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA	NA
AVD40439.1|639978_640551_-	urea carboxylase-associated family protein	NA	NA	NA	NA	NA
AVD40440.1|640954_641524_+	GrpB family protein	NA	NA	NA	NA	NA
AVD40441.1|641860_643033_-	ATP-binding protein	NA	X5JAC0	Clostridium_phage	25.3	4.0e-14
AVD40442.1|643428_643605_-	hypothetical protein	NA	NA	NA	NA	NA
AVD40443.1|643708_644290_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AVD40444.1|644412_645237_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AVD40445.1|645402_646296_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 3
CP026614	Clostridioides difficile strain R2 chromosome, complete genome	4093145	1337332	1400240	4093145	portal,protease,plate,tail,tRNA,transposase	Clostridium_phage(42.86%)	61	NA	NA
AVD41036.1|1337332_1338067_+|protease	Clp protease	protease	NA	NA	NA	NA
AVD41037.1|1338189_1340598_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	50.4	3.3e-92
AVD41038.1|1340600_1341659_+|tRNA	tRNA 2-selenouridine(34) synthase MnmH	tRNA	NA	NA	NA	NA
AVD41039.1|1341652_1342987_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
AVD41040.1|1342973_1343516_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
AVD41041.1|1343782_1344829_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	65.8	7.1e-124
AVD41368.1|1345004_1346546_+	ribonuclease Y	NA	NA	NA	NA	NA
AVD41042.1|1346855_1349192_+	diguanylate cyclase	NA	G3MA91	Bacillus_virus	29.8	3.8e-16
AVD41043.1|1350097_1351216_+|transposase	transposase	transposase	A0A0H3UZC2	Geobacillus_virus	53.0	2.4e-109
AVD41044.1|1351280_1351496_+	hypothetical protein	NA	NA	NA	NA	NA
AVD41045.1|1351547_1353329_+	DNA helicase	NA	NA	NA	NA	NA
AVD41046.1|1353408_1353939_-	signal peptidase I	NA	NA	NA	NA	NA
AVD41047.1|1353978_1354803_-	undecaprenyl-diphosphatase	NA	NA	NA	NA	NA
AVD41048.1|1355059_1355971_+	recombinase	NA	NA	NA	NA	NA
AVD41049.1|1356109_1357555_+	adenylosuccinate lyase	NA	NA	NA	NA	NA
AVD41050.1|1357855_1358308_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AVD41051.1|1358526_1359723_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
AVD41052.1|1360107_1361058_+	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
AVD41053.1|1361178_1361931_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	44.4	1.6e-56
AVD41054.1|1362022_1362799_-	exonuclease	NA	NA	NA	NA	NA
AVD41055.1|1363113_1365012_+	glutamine synthetase	NA	NA	NA	NA	NA
AVD41369.1|1365139_1366261_-	galactosyldiacylglycerol synthase	NA	NA	NA	NA	NA
AVD41056.1|1366459_1366792_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AVD41057.1|1366778_1367837_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
AVD41058.1|1367829_1368900_+	hypothetical protein	NA	NA	NA	NA	NA
AVD41059.1|1369001_1369538_+	hypothetical protein	NA	NA	NA	NA	NA
AVD41060.1|1369657_1370365_+	lantibiotic protection ABC transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	49.8	2.3e-57
AVD41061.1|1370366_1371086_+	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	NA	NA	NA	NA
AVD41062.1|1371087_1371858_+	lantibiotic immunity ABC transporter MutG family permease subunit	NA	NA	NA	NA	NA
AVD41370.1|1371991_1373383_+	sensor histidine kinase	NA	NA	NA	NA	NA
AVD41063.1|1373458_1374280_-	pyridoxamine kinase	NA	NA	NA	NA	NA
AVD41064.1|1374530_1375685_+	amidase domain-containing protein	NA	NA	NA	NA	NA
AVD41065.1|1375867_1376068_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	66.2	2.7e-16
AVD41066.1|1376488_1376917_+	CBS domain-containing protein	NA	NA	NA	NA	NA
AVD41067.1|1377059_1377815_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AVD41068.1|1377935_1378352_-	hypothetical protein	NA	NA	NA	NA	NA
AVD41069.1|1378515_1379022_-	hypothetical protein	NA	A0A0A8WEK1	Clostridium_phage	67.7	1.1e-56
AVD41070.1|1379103_1379424_-	XRE family transcriptional regulator	NA	A0A0A8WE28	Clostridium_phage	55.5	9.7e-24
AVD41071.1|1379592_1379790_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AVD41072.1|1379893_1380334_+	hypothetical protein	NA	A0A090EUN5	Clostridium_phage	47.9	1.1e-28
AVD41073.1|1380582_1381026_+	hypothetical protein	NA	A0A1V0DZX9	Clostridioides_phage	36.7	2.0e-19
AVD41074.1|1381030_1382095_+|tail	phage tail sheath protein	tail	A0A1V0DZX4	Clostridioides_phage	53.1	5.8e-97
AVD41075.1|1382108_1382537_+|portal	phage portal protein	portal	A0A1V0DZX1	Clostridioides_phage	51.8	2.8e-34
AVD41076.1|1382650_1383097_+|portal	phage portal protein	portal	A0A090EUD0	Clostridium_phage	36.0	8.2e-13
AVD41077.1|1383123_1383291_+	hypothetical protein	NA	NA	NA	NA	NA
AVD41078.1|1383290_1385744_+	hypothetical protein	NA	A0A1V0DZX3	Clostridioides_phage	58.4	1.4e-16
AVD41079.1|1385743_1386166_+	hypothetical protein	NA	A0A090DBR9	Clostridium_phage	71.1	1.7e-52
AVD41080.1|1386447_1387977_+	cell wall hydrolase	NA	A0A1V0DZX6	Clostridioides_phage	81.1	1.3e-243
AVD41081.1|1387992_1388319_+	DUF2577 domain-containing protein	NA	J9QE86	Clostridium_phage	92.6	3.9e-52
AVD41082.1|1388318_1388747_+	DUF2634 domain-containing protein	NA	A0A0A8WJ32	Clostridium_phage	81.0	3.7e-63
AVD41083.1|1388739_1389792_+|plate	baseplate J/gp47 family protein	plate	A0A0A8WFP3	Clostridium_phage	70.4	3.5e-139
AVD41084.1|1389788_1390487_+	DUF2313 domain-containing protein	NA	A0A090D815	Clostridium_phage	56.9	9.5e-48
AVD41085.1|1390487_1391474_+|tail	phage tail protein	tail	A0A2H4J039	uncultured_Caudovirales_phage	45.8	7.6e-59
AVD41086.1|1391495_1396673_+	chromosome condensation regulator	NA	A0A0A8WEY5	Clostridium_phage	27.2	2.6e-81
AVD41087.1|1396689_1397043_+	hypothetical protein	NA	A0A0A8WJF2	Clostridium_phage	42.1	5.5e-12
AVD41088.1|1397305_1397566_+	hypothetical protein	NA	E2ELK7	Clostridium_phage	90.6	9.9e-35
AVD41089.1|1397776_1398232_-	hypothetical protein	NA	NA	NA	NA	NA
AVD41090.1|1398459_1398879_-	XRE family transcriptional regulator	NA	S5MUV6	Brevibacillus_phage	35.9	1.6e-05
AVD41091.1|1399174_1399384_+	XRE family transcriptional regulator	NA	Q5YAA3	Bacillus_phage	47.2	5.9e-06
AVD41092.1|1399403_1399625_+	hypothetical protein	NA	NA	NA	NA	NA
AVD41093.1|1399841_1400240_-	helix-turn-helix domain-containing protein	NA	A0A059T669	Listeria_phage	34.5	1.0e-06
>prophage 4
CP026614	Clostridioides difficile strain R2 chromosome, complete genome	4093145	1478700	1488429	4093145		Pandoravirus(37.5%)	11	NA	NA
AVD41156.1|1478700_1479285_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	53.2	2.5e-57
AVD41157.1|1479277_1480636_+	aminodeoxychorismate synthase component I	NA	S4VNU7	Pandoravirus	41.6	7.8e-38
AVD41158.1|1480625_1481369_+	aminodeoxychorismate lyase	NA	NA	NA	NA	NA
AVD41159.1|1481402_1482104_+	hypothetical protein	NA	NA	NA	NA	NA
AVD41160.1|1482129_1482702_+	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	51.6	2.3e-44
AVD41161.1|1482755_1483559_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	30.0	1.1e-23
AVD41162.1|1483569_1483935_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AVD41163.1|1483927_1484434_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	S4VNV0	Pandoravirus	33.9	4.2e-13
AVD41164.1|1484414_1485200_+	3-deoxy-7-phosphoheptulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	27.9	1.7e-13
AVD41165.1|1485454_1487245_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	32.6	1.2e-51
AVD41166.1|1487256_1488429_+	RNA polymerase sigma factor RpoD	NA	M4SMP8	Cyanophage	36.8	9.7e-37
>prophage 5
CP026614	Clostridioides difficile strain R2 chromosome, complete genome	4093145	1581353	1601924	4093145	integrase	Streptococcus_phage(94.44%)	24	1578546:1578561	1605802:1605817
1578546:1578561	attL	TTCACTTGCTTGTCCT	NA	NA	NA	NA
AVD41246.1|1581353_1582121_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	3.4e-30
AVD41247.1|1582107_1584045_+	ABC transporter permease	NA	NA	NA	NA	NA
AVD41248.1|1584260_1584380_+	hypothetical protein	NA	NA	NA	NA	NA
AVD41249.1|1584402_1584717_+	DUF961 domain-containing protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
AVD41250.1|1584732_1585119_+	DUF961 domain-containing protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
AVD41251.1|1585147_1586533_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
AVD41252.1|1586535_1586688_+	conjugal transfer protein	NA	NA	NA	NA	NA
AVD41253.1|1586710_1587916_+	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
AVD41254.1|1587958_1588180_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
AVD41255.1|1588296_1588794_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
AVD41256.1|1588768_1589275_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
AVD41257.1|1589258_1591706_+	ATP/GTP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
AXL65760.1|1591708_1593886_+	YtxH domain-containing protein	NA	A0A1S5SF30	Streptococcus_phage	99.2	0.0e+00
AVD37838.1|1594879_1595812_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
AVD37839.1|1596086_1596173_+	tetracycline resistance protein	NA	NA	NA	NA	NA
AVD37840.1|1596188_1598108_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.4	0.0e+00
AVD37841.1|1598208_1598394_+	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	67.9	3.9e-17
AVD37842.1|1598453_1598807_-	XRE family transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
AVD41258.1|1599011_1599083_+	hypothetical protein	NA	NA	NA	NA	NA
AVD37843.1|1599311_1599734_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
AVD37844.1|1599730_1599961_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
AVD37845.1|1600186_1600438_-	hypothetical protein	NA	NA	NA	NA	NA
AVD37846.1|1600421_1600625_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
AVD37847.1|1600706_1601924_+|integrase	site-specific integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
1605802:1605817	attR	AGGACAAGCAAGTGAA	NA	NA	NA	NA
>prophage 6
CP026614	Clostridioides difficile strain R2 chromosome, complete genome	4093145	2727268	2748563	4093145	integrase	Streptococcus_phage(90.0%)	25	2726237:2726252	2746446:2746461
2726237:2726252	attL	AAAATATTTTTTATAA	NA	NA	NA	NA
AVD38818.1|2727268_2727583_+	DUF961 domain-containing protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
AVD38819.1|2727598_2727985_+	DUF961 domain-containing protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
AVD38820.1|2728013_2729399_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
AVD38821.1|2729401_2729554_+	conjugal transfer protein	NA	NA	NA	NA	NA
AVD38822.1|2729576_2730782_+	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
AVD38823.1|2730824_2731046_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
AVD38824.1|2731162_2731660_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
AVD38825.1|2731634_2732141_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
AVD38826.1|2732124_2734572_+	ATP/GTP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
AVD38827.1|2734574_2736752_+	YtxH domain-containing protein	NA	A0A1S5SF30	Streptococcus_phage	99.2	0.0e+00
AVD38828.1|2736748_2737750_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
AVD38829.1|2737746_2738679_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
AVD38830.1|2738953_2739040_+	tetracycline resistance protein	NA	NA	NA	NA	NA
AVD38831.1|2739055_2740975_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.4	0.0e+00
AVD38832.1|2741075_2741261_+	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	67.9	3.9e-17
AVD38833.1|2741320_2741674_-	XRE family transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
AVD41301.1|2741878_2741950_+	hypothetical protein	NA	NA	NA	NA	NA
AVD38834.1|2742178_2742601_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
AVD38835.1|2742597_2742828_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
AVD38836.1|2743053_2743305_-	hypothetical protein	NA	NA	NA	NA	NA
AVD38837.1|2743288_2743492_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
AVD38838.1|2743573_2744791_+|integrase	site-specific integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
AVD38839.1|2745095_2746205_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	Q6GZ03	Mycoplasma_phage	33.3	1.1e-21
AVD38840.1|2746234_2747002_+	PucR family transcriptional regulator	NA	NA	NA	NA	NA
2746446:2746461	attR	AAAATATTTTTTATAA	NA	NA	NA	NA
AVD38841.1|2747189_2748563_-	MFS transporter	NA	S4TR35	Salmonella_phage	22.0	2.5e-07
>prophage 7
CP026614	Clostridioides difficile strain R2 chromosome, complete genome	4093145	3130149	3139101	4093145		Catovirus(50.0%)	8	NA	NA
AVD39149.1|3130149_3132063_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.8	1.1e-26
AVD39150.1|3132145_3133237_-	glycosyltransferase family 4 protein	NA	A0A1V0SL50	Klosneuvirus	26.2	1.0e-16
AVD41307.1|3133242_3134538_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	43.4	1.4e-89
AVD39151.1|3134563_3135316_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	40.5	3.5e-16
AVD39152.1|3135363_3136272_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AVD39153.1|3136293_3137043_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	38.8	1.2e-16
AVD39154.1|3137071_3138262_-	glycerophosphotransferase	NA	NA	NA	NA	NA
AVD39155.1|3138261_3139101_-	glycosyltransferase family 2 protein	NA	A0A2P1ELT8	Moumouvirus	25.9	1.8e-05
