The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026924	Agrobacterium tumefaciens strain 1D1609 chromosome I, complete sequence	3058772	560995	570139	3058772	tail	Rhizobium_phage(37.5%)	13	NA	NA
AVH40592.1|560995_561439_+	nuclease	NA	G8DH70	Emiliania_huxleyi_virus	49.1	1.4e-25
AVH40593.1|561534_562014_-	hypothetical protein	NA	NA	NA	NA	NA
AVH40594.1|562096_562597_-	hypothetical protein	NA	R9TS95	Rhizobium_phage	55.7	5.6e-42
AVH40595.1|562599_562926_-	hypothetical protein	NA	R9TN87	Rhizobium_phage	83.3	2.9e-39
AVH40596.1|562948_563626_-	peptidoglycan-binding domain 1 protein	NA	R9TRQ2	Rhizobium_phage	94.2	5.1e-123
AVH40597.1|564033_564486_-	hypothetical protein	NA	F8TUT1	EBPR_podovirus	50.0	1.6e-08
AVH40598.1|564485_565451_-|tail	phage tail fiber protein	tail	Q8HA60	Vibrio_phage	34.1	4.9e-10
AVH40599.1|565447_565792_-	hypothetical protein	NA	NA	NA	NA	NA
AVH40600.1|565793_566747_-	hypothetical protein	NA	V5YTB8	Pseudomonas_phage	39.7	1.9e-14
AVH40601.1|566756_567023_-	hypothetical protein	NA	NA	NA	NA	NA
AVH40602.1|567132_567384_+	mRNA interferase RelE	NA	NA	NA	NA	NA
AVH40603.1|567394_567748_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AVH40604.1|568021_570139_-	hypothetical protein	NA	M4QPL5	Sulfitobacter_phage	32.6	4.6e-53
>prophage 2
CP026924	Agrobacterium tumefaciens strain 1D1609 chromosome I, complete sequence	3058772	1003265	1013018	3058772	protease,tail,terminase,head,portal,capsid	Arthrobacter_phage(20.0%)	13	NA	NA
AVH41049.1|1003265_1004525_+|terminase	large terminase phage packaging protein	terminase	A0A0U4IJ26	Arthrobacter_phage	42.3	2.6e-72
AVH41050.1|1004654_1004762_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41051.1|1004972_1005611_+	chitinase	NA	R9U4A9	Rhizobium_phage	44.4	6.2e-38
AVH41052.1|1005654_1005978_+	stress responsive protein	NA	NA	NA	NA	NA
AVH41053.1|1006251_1007418_+|head,portal	phage head portal protein	head,portal	W8ECU7	Geobacillus_phage	38.0	6.6e-62
AVH41054.1|1007613_1007934_+	hypothetical protein	NA	NA	NA	NA	NA
AVH41055.1|1007962_1008535_+|head,protease	phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	44.5	8.9e-28
AVH41056.1|1008565_1009834_+|capsid	phage phi-C31 major capsid gp36-like protein	capsid	Q3HQT0	Burkholderia_phage	42.4	3.0e-76
AVH41057.1|1010012_1010582_+	hypothetical protein	NA	NA	NA	NA	NA
AVH41058.1|1010585_1010921_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
AVH41059.1|1010917_1011313_+	hypothetical protein	NA	NA	NA	NA	NA
AVH41060.1|1011320_1012520_-	MFS permease	NA	NA	NA	NA	NA
AVH41061.1|1012610_1013018_+|tail	tail protein	tail	NA	NA	NA	NA
>prophage 3
CP026924	Agrobacterium tumefaciens strain 1D1609 chromosome I, complete sequence	3058772	1532690	1541860	3058772	integrase,terminase	Ralstonia_phage(16.67%)	11	1528145:1528161	1546772:1546788
1528145:1528161	attL	CGCCCGTTTCGGCGGCT	NA	NA	NA	NA
AVH41578.1|1532690_1533833_+|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	37.3	1.4e-59
AVH41579.1|1534105_1534309_+	hypothetical protein	NA	NA	NA	NA	NA
AVH41580.1|1534626_1535409_+	hypothetical protein	NA	NA	NA	NA	NA
AVH41581.1|1535596_1535854_+	hypothetical protein	NA	NA	NA	NA	NA
AVH41582.1|1535981_1536311_+	hypothetical protein	NA	NA	NA	NA	NA
AVH41583.1|1536467_1538132_+|terminase	terminase	terminase	Q9MCV7	Escherichia_phage	41.6	2.0e-91
AVH41584.1|1538143_1538407_+	hypothetical protein	NA	NA	NA	NA	NA
AVH41585.1|1538679_1539846_+	hypothetical protein	NA	K7XS73	uncultured_Mediterranean_phage	34.1	2.1e-39
AVH41586.1|1539847_1540126_+	hypothetical protein	NA	A0A286S294	Klebsiella_phage	34.4	5.1e-05
AVH41587.1|1540122_1540668_+	primosome assembly protein PriA	NA	A0A2H4J6Z9	uncultured_Caudovirales_phage	45.2	4.2e-27
AVH41588.1|1540651_1541860_+	hypothetical protein	NA	A4JWZ9	Burkholderia_virus	36.1	4.3e-56
1546772:1546788	attR	CGCCCGTTTCGGCGGCT	NA	NA	NA	NA
>prophage 4
CP026924	Agrobacterium tumefaciens strain 1D1609 chromosome I, complete sequence	3058772	1751359	1759912	3058772	tRNA	uncultured_Mediterranean_phage(75.0%)	9	NA	NA
AVH41779.1|1751359_1753003_-	lipoprotein	NA	I3PV24	Clostridium_phage	30.4	1.2e-11
AVH41780.1|1753270_1753924_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1J0MC37	Streptomyces_phage	35.1	1.0e-11
AVH41781.1|1753920_1754691_-	stationary-phase survival protein	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	30.3	1.6e-24
AVH41782.1|1754897_1756181_-|tRNA	seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.8	1.4e-97
AVH41783.1|1756282_1757086_-	sec-independent protein translocase protein TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	39.9	9.9e-41
AVH41784.1|1757082_1757847_-	sec-independent protein translocase protein TatB	NA	NA	NA	NA	NA
AVH41785.1|1758004_1758211_-	sec-independent protein translocase protein TatA	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	69.8	2.1e-08
AVH41786.1|1758339_1759074_-	segregation and condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	47.6	1.3e-39
AVH41787.1|1759063_1759912_-	segregation and condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	34.2	1.1e-34
>prophage 5
CP026924	Agrobacterium tumefaciens strain 1D1609 chromosome I, complete sequence	3058772	1779324	1807326	3058772	terminase	Rhizobium_phage(59.26%)	37	NA	NA
AVH41802.1|1779324_1779582_-	hypothetical protein	NA	W6E8L8	Rhizobium_phage	48.1	1.3e-15
AVH41803.1|1779578_1780658_-	hypothetical protein	NA	W8EHB5	Pseudomonas_phage	41.0	3.1e-29
AVH41804.1|1780750_1781995_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41805.1|1782074_1783943_-	hypothetical protein	NA	B4UTR2	Rhizobium_phage	44.6	5.0e-11
AVH41806.1|1784016_1784385_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41807.1|1784395_1785307_-	hypothetical protein	NA	R9U0V1	Rhizobium_phage	55.8	2.1e-15
AVH41808.1|1785318_1786149_-	hypothetical protein	NA	L7TKX3	Rhizobium_phage	36.2	2.1e-49
AVH41809.1|1786150_1787050_-	hypothetical protein	NA	L7TN06	Rhizobium_phage	46.7	3.5e-71
AVH41810.1|1787046_1787412_-	hypothetical protein	NA	L7TJM2	Rhizobium_phage	59.1	1.9e-31
AVH41811.1|1787408_1788065_-	hypothetical protein	NA	L7TMF3	Rhizobium_phage	42.4	8.9e-32
AVH41812.1|1788064_1788946_-	hypothetical protein	NA	L7TRC2	Rhizobium_phage	60.1	1.9e-101
AVH41813.1|1789254_1789818_-	hypothetical protein	NA	L7TN02	Rhizobium_phage	53.1	9.7e-43
AVH41814.1|1789817_1791455_-	hypothetical protein	NA	A0A068C997	Rhizobium_phage	57.6	6.4e-103
AVH41815.1|1791621_1792080_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41816.1|1792152_1792587_-	hypothetical protein	NA	L7TRB4	Rhizobium_phage	54.5	6.1e-37
AVH41817.1|1792598_1793741_-	hypothetical protein	NA	L7TKV9	Rhizobium_phage	56.9	5.1e-115
AVH41818.1|1793767_1794250_-	hypothetical protein	NA	L7TMZ9	Rhizobium_phage	53.6	8.3e-35
AVH41819.1|1794246_1794579_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41820.1|1794575_1795040_-	hypothetical protein	NA	L7TME2	Rhizobium_phage	63.0	3.4e-46
AVH41821.1|1795039_1795429_-	hypothetical protein	NA	L7TRB1	Rhizobium_phage	50.4	3.3e-26
AVH41822.1|1795428_1795620_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41823.1|1795676_1796138_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41824.1|1796149_1797118_-	hypothetical protein	NA	A0A2H4J526	uncultured_Caudovirales_phage	74.1	4.4e-136
AVH41825.1|1797121_1797601_-	hypothetical protein	NA	A0A2H4J1G1	uncultured_Caudovirales_phage	65.2	1.6e-46
AVH41826.1|1797613_1798765_-	hypothetical protein	NA	A0A059VF71	Pseudomonas_phage	39.1	2.7e-47
AVH41827.1|1798777_1799584_-	hypothetical protein	NA	A0A1B0VMI8	Pseudomonas_phage	41.7	3.3e-36
AVH41828.1|1799619_1799814_+	hypothetical protein	NA	NA	NA	NA	NA
AVH41829.1|1799810_1800467_-	hypothetical protein	NA	A0A2K9V4K7	Staphylococcus_phage	35.8	8.1e-25
AVH41830.1|1800549_1801371_-	hypothetical protein	NA	L7TMD0	Rhizobium_phage	48.9	5.9e-65
AVH41831.1|1801370_1802726_-	hypothetical protein	NA	A0A2H4J4I9	uncultured_Caudovirales_phage	49.4	4.0e-111
AVH41832.1|1802713_1802866_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41833.1|1802869_1804354_-|terminase	terminase	terminase	A0A1P8VVI4	Erythrobacter_phage	43.6	2.8e-97
AVH41834.1|1804310_1804685_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41835.1|1804998_1805259_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41836.1|1805289_1805625_-	hypothetical protein	NA	A0A088F6V5	Sulfitobacter_phage	42.2	1.6e-16
AVH41837.1|1806124_1806895_-	hypothetical protein	NA	A0A141GF38	Brucella_phage	41.0	1.3e-45
AVH41838.1|1806891_1807326_-	hypothetical protein	NA	A0A141GF37	Brucella_phage	70.6	1.7e-55
>prophage 6
CP026924	Agrobacterium tumefaciens strain 1D1609 chromosome I, complete sequence	3058772	1916119	1940732	3058772	holin,tail,terminase,head,capsid	Morganella_phage(20.0%)	31	NA	NA
AVH41964.1|1916119_1916845_-|holin	phosphatidylcholine synthase	holin	NA	NA	NA	NA
AVH41965.1|1917054_1918263_+	2-octaprenyl-6-methoxyphenol hydroxylase	NA	NA	NA	NA	NA
AVH41966.1|1918246_1919185_-	malonate transporter	NA	NA	NA	NA	NA
AVH41967.1|1919219_1919981_-	cytochrome c-type biogenesis protein	NA	NA	NA	NA	NA
AVH41968.1|1920587_1921853_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41969.1|1922009_1922450_-	lactoylglutathione lyase	NA	NA	NA	NA	NA
AVH41970.1|1922642_1923221_+	cold shock protein	NA	A0A1W6JNX5	Morganella_phage	42.4	5.1e-07
AVH41971.1|1923220_1923703_+	signal peptide protein	NA	NA	NA	NA	NA
AVH41972.1|1923763_1924012_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41973.1|1924225_1924495_+	hypothetical protein	NA	NA	NA	NA	NA
AVH41974.1|1924654_1925851_+	UDP-glucose:ceramide glycosyltransferase	NA	NA	NA	NA	NA
AVH41975.1|1926142_1926592_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41976.1|1926598_1927717_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41977.1|1927860_1928187_-	succinoglycan biosynthesis protein ExoI	NA	NA	NA	NA	NA
AVH41978.1|1928293_1928482_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41979.1|1928481_1928937_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41980.1|1929037_1929592_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41981.1|1929789_1930566_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41982.1|1930610_1931042_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41983.1|1931265_1933971_-|tail	tail protein	tail	A0A291AUM6	Sinorhizobium_phage	44.7	6.0e-58
AVH41984.1|1933982_1935617_-|terminase	terminase	terminase	A0A286S1M9	Klebsiella_phage	30.1	5.1e-36
AVH41985.1|1935609_1936020_-|terminase	terminase	terminase	NA	NA	NA	NA
AVH41986.1|1936016_1936334_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
AVH41987.1|1936330_1936762_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41988.1|1936758_1937184_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41989.1|1937173_1937476_-	DNA-packaging protein	NA	NA	NA	NA	NA
AVH41990.1|1937818_1937932_+	hypothetical protein	NA	NA	NA	NA	NA
AVH41991.1|1937893_1938205_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41992.1|1938201_1938543_-	HNH endonuclease	NA	Q38456	Bacillus_phage	47.2	2.2e-18
AVH41993.1|1938539_1939157_-	hypothetical protein	NA	NA	NA	NA	NA
AVH41994.1|1939160_1940732_-|capsid	capsid protein	capsid	A0A141GEW2	Brucella_phage	32.5	2.4e-35
>prophage 1
CP026925	Agrobacterium tumefaciens strain 1D1609 chromosome II, complete sequence	2329227	659880	668523	2329227	transposase	Salmonella_phage(16.67%)	9	NA	NA
AVH43640.1|659880_661785_-	cobyrinic acid synthase	NA	J9Q7G6	Salmonella_phage	30.3	4.3e-18
AVH43641.1|661892_662882_-	cobalamin biosynthesis protein	NA	L7TKP0	Rhizobium_phage	32.5	4.9e-42
AVH43642.1|662950_663586_-	molecular chaperone DnaJ	NA	A0A2P1ELC3	Moumouvirus	42.9	4.0e-05
AVH43643.1|663700_663982_+	stress induced morphogen	NA	NA	NA	NA	NA
AVH43644.1|664094_665159_+|transposase	transposase	transposase	E5E3P6	Burkholderia_phage	30.4	4.4e-28
AVH43645.1|665451_666585_-	3-dehydroquinate synthase	NA	A9YVT7	Ostreococcus_tauri_virus	30.2	2.6e-26
AVH43646.1|666590_667172_-	shikimate kinase	NA	NA	NA	NA	NA
AVH43647.1|667360_667534_+	signal peptide protein	NA	NA	NA	NA	NA
AVH43648.1|667530_668523_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.0	1.8e-36
>prophage 2
CP026925	Agrobacterium tumefaciens strain 1D1609 chromosome II, complete sequence	2329227	1058195	1068774	2329227	tail	Rhizobium_phage(28.57%)	18	NA	NA
AVH44011.1|1058195_1060313_+	hypothetical protein	NA	M4QPL5	Sulfitobacter_phage	31.5	4.0e-49
AVH44012.1|1060567_1060705_+	hypothetical protein	NA	NA	NA	NA	NA
AVH44013.1|1060682_1060997_-	hypothetical protein	NA	NA	NA	NA	NA
AVH44014.1|1061019_1061304_-	hypothetical protein	NA	NA	NA	NA	NA
AVH44015.1|1061428_1061743_+	hypothetical protein	NA	NA	NA	NA	NA
AVH44016.1|1061752_1062706_+	hypothetical protein	NA	V5YTB8	Pseudomonas_phage	39.7	1.9e-14
AVH44017.1|1062707_1063052_+	hypothetical protein	NA	NA	NA	NA	NA
AVH44018.1|1063048_1064014_+|tail	phage tail fiber protein	tail	Q8HA60	Vibrio_phage	33.5	4.9e-10
AVH44019.1|1064013_1064466_+	hypothetical protein	NA	A0A291AUN7	Sinorhizobium_phage	40.8	1.2e-11
AVH44020.1|1064524_1064710_+	hypothetical protein	NA	NA	NA	NA	NA
AVH44021.1|1064867_1065545_+	peptidoglycan-binding domain 1 protein	NA	R9TRQ2	Rhizobium_phage	94.2	1.3e-123
AVH44022.1|1065567_1065894_+	hypothetical protein	NA	R9TN87	Rhizobium_phage	92.6	9.5e-43
AVH44023.1|1065896_1066070_+	hypothetical protein	NA	NA	NA	NA	NA
AVH44024.1|1066131_1066458_+	hypothetical protein	NA	NA	NA	NA	NA
AVH44025.1|1066503_1067058_-	hypothetical protein	NA	NA	NA	NA	NA
AVH44026.1|1067057_1067519_-	hypothetical protein	NA	NA	NA	NA	NA
AVH44027.1|1068130_1068490_-	hypothetical protein	NA	NA	NA	NA	NA
AVH44028.1|1068486_1068774_-	hypothetical protein	NA	A0A141GEY3	Brucella_phage	46.1	5.5e-10
>prophage 3
CP026925	Agrobacterium tumefaciens strain 1D1609 chromosome II, complete sequence	2329227	1442537	1483159	2329227	protease,transposase	Leptospira_phage(33.33%)	33	NA	NA
AVH44338.1|1442537_1445162_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpB	protease	K4FB40	Cronobacter_phage	37.4	1.0e-118
AVH44339.1|1445268_1447215_-	peptidase M24	NA	G9BW84	Planktothrix_phage	43.3	5.2e-19
AVH44340.1|1454596_1454863_+|transposase	transposase	transposase	NA	NA	NA	NA
AVH44341.1|1454883_1455699_+|transposase	transposase	transposase	S5WIU1	Leptospira_phage	39.0	1.1e-44
AVH44342.1|1455608_1455902_-	hypothetical protein	NA	NA	NA	NA	NA
AVH44343.1|1456515_1457226_-	hypothetical protein	NA	NA	NA	NA	NA
AVH44344.1|1457296_1457743_-	hypothetical protein	NA	NA	NA	NA	NA
AVH44345.1|1457848_1458280_+|transposase	transposase	transposase	NA	NA	NA	NA
AVH44346.1|1458399_1458564_-	hypothetical protein	NA	NA	NA	NA	NA
AVH44347.1|1458708_1459278_-	invertase	NA	A0A219YA40	Aeromonas_phage	48.3	4.9e-34
AVH44348.1|1459912_1460167_+	prevent-host-death protein	NA	NA	NA	NA	NA
AVH44349.1|1460758_1461649_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AVH44350.1|1461761_1462934_+	mandelate racemase/muconate lactonizing protein	NA	NA	NA	NA	NA
AVH44351.1|1462944_1463970_-	LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor	NA	NA	NA	NA	NA
AVH44352.1|1464207_1465188_+	MFS transporter	NA	NA	NA	NA	NA
AVH44353.1|1465261_1465741_+	membrane protein	NA	NA	NA	NA	NA
AVH44354.1|1465779_1467279_+	tripartite tricarboxylate transporter TctA	NA	NA	NA	NA	NA
AVH44355.1|1467423_1468083_+	hypothetical protein	NA	NA	NA	NA	NA
AVH44356.1|1468513_1468669_+	hypothetical protein	NA	NA	NA	NA	NA
AVH44357.1|1468675_1469368_-	hypothetical protein	NA	NA	NA	NA	NA
AVH44358.1|1469467_1469707_+	hypothetical protein	NA	NA	NA	NA	NA
AVH44359.1|1469764_1470985_+	DNA-binding protein	NA	NA	NA	NA	NA
AVH44360.1|1470994_1471645_+	glutamine cyclotransferase	NA	NA	NA	NA	NA
AVH44361.1|1471641_1472280_+	hypothetical protein	NA	NA	NA	NA	NA
AVH44362.1|1473717_1474251_+	hypothetical protein	NA	NA	NA	NA	NA
AVH44363.1|1474257_1475187_-	hypothetical protein	NA	NA	NA	NA	NA
AVH44364.1|1475317_1477582_+	type VI secretion system secreted protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	27.3	9.3e-36
AVH44365.1|1477595_1478711_+	DUF2169 family protein	NA	NA	NA	NA	NA
AVH44366.1|1478707_1480150_+	DUF4150 family protein	NA	NA	NA	NA	NA
AVH44367.1|1480146_1480725_+	hypothetical protein	NA	NA	NA	NA	NA
AVH44368.1|1480911_1481649_+	hypothetical protein	NA	NA	NA	NA	NA
AVH44369.1|1482056_1482872_-|transposase	transposase	transposase	S5WIU1	Leptospira_phage	39.0	1.1e-44
AVH44370.1|1482892_1483159_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 4
CP026925	Agrobacterium tumefaciens strain 1D1609 chromosome II, complete sequence	2329227	2242158	2288580	2329227	transposase	Shigella_phage(33.33%)	46	NA	NA
AVH45054.1|2242158_2242560_+|transposase	transposase	transposase	Q76S41	Shigella_phage	59.5	1.1e-29
AVH45055.1|2242556_2243408_+|transposase	transposase	transposase	A0A1B0Z042	Pseudomonas_phage	52.8	5.5e-74
AVH45056.1|2243407_2243680_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45057.1|2243999_2247059_-	FAD-linked oxidase	NA	NA	NA	NA	NA
AVH45058.1|2247090_2248014_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AVH45059.1|2248000_2249287_-	MFS transporter	NA	NA	NA	NA	NA
AVH45060.1|2249505_2249991_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AVH45061.1|2250574_2251372_-|transposase	transposase	transposase	NA	NA	NA	NA
AVH45062.1|2251368_2251731_-|transposase	transposase	transposase	NA	NA	NA	NA
AVH45063.1|2252903_2253593_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45064.1|2253652_2254228_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45065.1|2254386_2255307_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45066.1|2255315_2255585_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45067.1|2255581_2257135_-	hypothetical protein	NA	A0A2K9L3I8	Tupanvirus	24.9	5.2e-22
AVH45068.1|2257131_2257989_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45069.1|2258122_2259298_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AVH45070.1|2259338_2259572_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45071.1|2259654_2260998_-	multidrug transporter MATE	NA	NA	NA	NA	NA
AVH45072.1|2261053_2262133_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45073.1|2262527_2262974_+	nodulation protein N	NA	NA	NA	NA	NA
AVH45074.1|2262998_2264573_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45075.1|2264569_2265403_+	peptidase	NA	NA	NA	NA	NA
AVH45076.1|2265819_2266149_-|transposase	transposase	transposase	U5P429	Shigella_phage	65.4	3.3e-35
AVH45077.1|2266871_2267549_-	permease	NA	NA	NA	NA	NA
AVH45078.1|2267898_2268153_+	prevent-host-death protein	NA	NA	NA	NA	NA
AVH45079.1|2268744_2269635_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AVH45080.1|2269747_2270920_+	mandelate racemase/muconate lactonizing protein	NA	NA	NA	NA	NA
AVH45081.1|2270930_2271956_-	LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor	NA	NA	NA	NA	NA
AVH45082.1|2272193_2273174_+	MFS transporter	NA	NA	NA	NA	NA
AVH45083.1|2273247_2273727_+	membrane protein	NA	NA	NA	NA	NA
AVH45084.1|2273765_2275265_+	tripartite tricarboxylate transporter TctA	NA	NA	NA	NA	NA
AVH45085.1|2275409_2276069_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45086.1|2276418_2276682_-	glutathione S-transferase	NA	NA	NA	NA	NA
AVH45087.1|2277041_2277503_+	membrane protein	NA	NA	NA	NA	NA
AVH45088.1|2277499_2278867_+	mercuric reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	34.8	2.7e-62
AVH45089.1|2279352_2280330_+	non-heme chloroperoxidase	NA	A0A220NRX7	Mycobacterium_phage	30.4	3.6e-13
AVH45090.1|2280428_2280881_+	endoribonuclease L-PSP	NA	NA	NA	NA	NA
AVH45091.1|2280953_2281685_+	cation transport protein ChaC	NA	NA	NA	NA	NA
AVH45092.1|2281671_2282571_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AVH45093.1|2282845_2283370_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45094.1|2283370_2285383_-	ankyrin repeat protein	NA	NA	NA	NA	NA
AVH45095.1|2285643_2286390_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45096.1|2286581_2286782_+	ABC transporter ATPase	NA	NA	NA	NA	NA
AVH45097.1|2286824_2287520_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45098.1|2287516_2287906_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45099.1|2288079_2288580_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 1
CP026927	Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609a, complete sequence	243381	194640	233348	243381	transposase,integrase	Leptospira_phage(28.57%)	31	197271:197285	236323:236337
AVH45478.1|194640_197616_+|transposase	transposase	transposase	A0A1B0V7H9	Salmonella_phage	37.6	6.6e-191
197271:197285	attL	CGGTCTCAACAAGGG	NA	NA	NA	NA
AVH45479.1|197635_198358_-	AcvB	NA	NA	NA	NA	NA
AVH45480.1|198936_201426_-	two-component VirA-like sensor kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	25.1	8.1e-09
AVH45481.1|201984_202692_+|transposase	transposase	transposase	NA	NA	NA	NA
AVH45482.1|202740_203178_-	VirK	NA	NA	NA	NA	NA
AVH45483.1|203449_204625_-	P-450 monooxygenase	NA	NA	NA	NA	NA
AVH45484.1|204861_205044_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45485.1|205629_205899_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45486.1|206189_206696_-|transposase	transposase	transposase	A0A218MNE7	uncultured_virus	35.8	6.9e-24
AVH45487.1|206692_207799_-|transposase	transposase IS66	transposase	S5VTD3	Leptospira_phage	37.2	1.4e-37
AVH45488.1|207840_208194_-|transposase	transposase	transposase	S5VXZ8	Leptospira_phage	39.8	4.8e-16
AVH45489.1|208897_210763_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45490.1|210752_211097_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45491.1|211654_212077_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45492.1|212799_213654_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45493.1|213643_214579_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45494.1|214578_215433_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45495.1|215441_217778_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45496.1|217774_218575_+	hypothetical protein	NA	A0A1S5SBU1	Streptococcus_phage	34.2	1.1e-28
AVH45497.1|218789_219956_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45498.1|219952_220459_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45499.1|220458_222438_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45500.1|222518_223322_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45501.1|223852_224968_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45502.1|225144_225921_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45503.1|226010_226805_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45504.1|226995_228138_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45505.1|228262_230365_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45506.1|230454_231135_-	transcriptional regulator	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	30.4	5.3e-19
AVH45507.1|231137_232091_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45508.1|232214_233348_+|integrase	integrase	integrase	NA	NA	NA	NA
236323:236337	attR	CCCTTGTTGAGACCG	NA	NA	NA	NA
>prophage 1
CP026928	Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence	187640	21716	90336	187640	transposase	Salmonella_phage(30.0%)	60	NA	NA
AVH45536.1|21716_24692_+|transposase	transposase	transposase	A0A1B0V7H9	Salmonella_phage	38.0	2.1e-189
AVH45537.1|24701_25691_-	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA	NA
AVH45538.1|26311_27187_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45539.1|27482_28943_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45540.1|29149_30214_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45541.1|30447_31263_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45542.1|31424_32252_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45543.1|32248_33133_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45544.1|33338_34550_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45545.1|34740_36042_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45546.1|36189_36855_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45547.1|36960_37074_+	DNA polymerase	NA	NA	NA	NA	NA
AVH45548.1|37275_37449_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45549.1|37543_38620_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45550.1|38607_39477_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45551.1|39669_40641_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45552.1|40618_40867_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45553.1|40869_42678_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45554.1|42720_43728_-	hypothetical protein	NA	A0A1S6KZX9	Salmonella_phage	28.5	4.3e-09
AVH45555.1|43756_45070_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45556.1|45141_46554_-	UvrD/REP helicase domain protein	NA	NA	NA	NA	NA
AVH45557.1|46546_48277_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
AVH45558.1|48974_49157_+	helicase	NA	NA	NA	NA	NA
AVH45559.1|49368_50331_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45560.1|50473_51076_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45561.1|51091_51493_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45562.1|51592_56698_+	lactate dehydrogenase	NA	I6WLR1	Burkholderia_virus	43.2	0.0e+00
AVH45563.1|56849_57722_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45564.1|57718_59482_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45565.1|59892_61737_+	plasmid partitioning protein	NA	NA	NA	NA	NA
AVH45566.1|61835_62306_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45567.1|62302_63193_+	hypothetical protein	NA	A0A1X9SH15	Bradyrhizobium_phage	35.9	5.6e-21
AVH45568.1|63189_63570_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45569.1|63960_64560_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45570.1|65158_65626_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45571.1|66167_66320_+	ATPase AAA	NA	NA	NA	NA	NA
AVH45572.1|66599_67232_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AVH45573.1|67329_68406_-	phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	8.1e-30
AVH45574.1|68407_69838_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AVH45575.1|69834_70323_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45576.1|70433_71474_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45577.1|71537_72338_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45578.1|72334_73165_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45579.1|73190_74027_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45580.1|74023_74977_+	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA	NA
AVH45581.1|75817_76291_-	purine-binding chemotaxis protein CheW	NA	NA	NA	NA	NA
AVH45582.1|76290_78084_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	34.6	2.5e-15
AVH45583.1|78117_78231_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45584.1|78383_79115_-	DNA-binding protein	NA	NA	NA	NA	NA
AVH45585.1|79708_80005_+	hypothetical protein	NA	I1ZBF8	Salisaeta_icosahedral_phage	68.6	1.9e-10
AVH45586.1|80546_80843_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45587.1|80928_81456_-	DNA damage-inducible protein DinB	NA	NA	NA	NA	NA
AVH45588.1|81522_82158_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AVH45589.1|82300_82447_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45590.1|82489_82765_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45591.1|82773_84429_-|transposase	transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	46.7	3.5e-101
AVH45592.1|84474_84822_-|transposase	transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	60.7	9.2e-36
AVH45593.1|84818_85217_-|transposase	transposase	transposase	NA	NA	NA	NA
AVH45594.1|85533_86652_-|transposase	transposase	transposase	NA	NA	NA	NA
AVH45595.1|87360_90336_-|transposase	transposase	transposase	A0A1B0V7H9	Salmonella_phage	37.6	6.6e-191
>prophage 1
CP026926	Agrobacterium tumefaciens strain 1D1609 plasmid pTi1D1609, complete sequence	166117	6051	60716	166117	integrase,transposase	Stx2-converting_phage(25.0%)	56	NA	NA
AVH45138.1|6051_7134_-|integrase	integrase	integrase	NA	NA	NA	NA
AVH45139.1|7135_7537_-	plasmid stabilization protein	NA	NA	NA	NA	NA
AVH45140.1|7536_7791_-	prevent-host-death protein	NA	NA	NA	NA	NA
AVH45141.1|8093_11069_-|transposase	transposase	transposase	A0A1B0V7H9	Salmonella_phage	37.6	6.6e-191
AVH45142.1|13044_13764_+	type IV secretion system lytic transglycosylase VirB1	NA	NA	NA	NA	NA
AVH45143.1|13778_14144_+	type IV secretion system protein VirB2	NA	NA	NA	NA	NA
AVH45144.1|14143_14470_+	type IV secretion system protein VirB3	NA	NA	NA	NA	NA
AVH45145.1|14469_16839_+	type IV secretion system protein VirB4	NA	NA	NA	NA	NA
AVH45146.1|16853_17516_+	type IV secretion system protein VirB5	NA	NA	NA	NA	NA
AVH45147.1|17612_18500_+	type IV secretion system protein VirB6	NA	NA	NA	NA	NA
AVH45148.1|18533_18701_+	type IV secretion system protein VirB7	NA	NA	NA	NA	NA
AVH45149.1|18687_19401_+	type IV secretion system protein VirB8	NA	NA	NA	NA	NA
AVH45150.1|19397_20279_+	type IV secretion system protein VirB9	NA	NA	NA	NA	NA
AVH45151.1|20275_21409_+	type IV secretion system protein VirB10	NA	NA	NA	NA	NA
AVH45152.1|21448_22480_+	type IV secretion system protein VirB11	NA	NA	NA	NA	NA
AVH45153.1|22689_23415_+	two-component response regulator VirG	NA	NA	NA	NA	NA
AVH45154.1|23473_23857_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45155.1|23912_24236_-|transposase	transposase	transposase	NA	NA	NA	NA
AVH45156.1|24239_25895_-|transposase	transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	46.8	1.6e-101
AVH45157.1|25940_26288_-|transposase	transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	61.7	1.8e-36
AVH45158.1|26284_26692_-|transposase	transposase	transposase	NA	NA	NA	NA
AVH45159.1|27008_28127_-|transposase	transposase	transposase	NA	NA	NA	NA
AVH45160.1|28275_29256_-|transposase	transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	43.3	2.9e-66
AVH45161.1|29601_30831_+|integrase	integrase	integrase	A0A142K830	Mycobacterium_phage	29.5	1.3e-12
AVH45162.1|30824_31739_+|integrase	integrase	integrase	NA	NA	NA	NA
AVH45163.1|31735_32725_+|integrase	integrase	integrase	A0A2L1IV36	Escherichia_phage	29.1	2.7e-08
AVH45164.1|32732_32924_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45165.1|32874_33267_-|transposase	transposase	transposase	NA	NA	NA	NA
AVH45166.1|33392_34001_-	crown gall tumor protein VirC2	NA	NA	NA	NA	NA
AVH45167.1|34003_34699_-	crown gall tumor protein VirC1	NA	A0A0A8IL09	Aurantimonas_phage	28.4	7.8e-10
AVH45168.1|34967_35411_+	type IV secretion system T-DNA border endonuclease VirD1	NA	NA	NA	NA	NA
AVH45169.1|35444_36719_+	type IV secretion system T-DNA border endonuclease VirD2	NA	NA	NA	NA	NA
AVH45170.1|36738_37344_+	virA/G regulated protein	NA	NA	NA	NA	NA
AVH45171.1|37372_39343_+	type IV secretion system protein VirD4	NA	NA	NA	NA	NA
AVH45172.1|39434_41936_+	virA/G regulated protein	NA	NA	NA	NA	NA
AVH45173.1|42388_42586_+	type IV secretion system chaperone VirE1	NA	NA	NA	NA	NA
AVH45174.1|42590_44192_+	type IV secretion system single-stranded DNA binding protein VirE2	NA	NA	NA	NA	NA
AVH45175.1|44257_46276_+	virA/G regulated protein	NA	NA	NA	NA	NA
AVH45176.1|46523_46718_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45177.1|46887_47196_+	integration host factor beta subunit	NA	E1XTB6	Salmonella_phage	37.2	3.2e-08
AVH45178.1|47246_47612_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45179.1|47625_47928_+	cold shock protein	NA	A0A218MMZ6	uncultured_virus	44.6	8.3e-09
AVH45180.1|48250_48751_+	amino acid transporter	NA	NA	NA	NA	NA
AVH45181.1|50438_50969_+	conjugal transfer protein TraF	NA	NA	NA	NA	NA
AVH45182.1|51006_51261_+	conjugal transfer protein TraB	NA	NA	NA	NA	NA
AVH45183.1|51487_52096_+	VirF	NA	NA	NA	NA	NA
AVH45184.1|52788_53031_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45185.1|53678_54311_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AVH45186.1|54390_54603_+	hypothetical protein	NA	NA	NA	NA	NA
AVH45187.1|54976_55504_+	VirH	NA	NA	NA	NA	NA
AVH45188.1|55587_56526_-|transposase	transposase	transposase	A0A1S7J231	Thermus_phage	26.2	2.2e-07
AVH45189.1|57164_57878_-|transposase	IS21 family transposase	transposase	A0A059NT77	Lactococcus_phage	33.8	1.6e-26
AVH45190.1|57867_58752_-|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	30.5	4.6e-07
AVH45191.1|59017_59695_+|transposase	transposase	transposase	NA	NA	NA	NA
AVH45192.1|59895_60021_-	hypothetical protein	NA	NA	NA	NA	NA
AVH45193.1|60020_60716_-|transposase	transposase	transposase	NA	NA	NA	NA
