The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP024809	Staphylococcus haemolyticus strain 83131A chromosome, complete genome	2593983	1101975	1143860	2593983	tRNA,transposase	Staphylococcus_phage(90.0%)	35	NA	NA
AUV67160.1|1101975_1103292_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	33.3	1.6e-43
AUV67161.1|1105170_1106565_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	61.6	7.9e-171
AUV67162.1|1106566_1107574_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	52.6	8.4e-98
AUV67163.1|1107570_1107807_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	74.7	2.4e-32
AUV67164.1|1107873_1108347_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	57.1	5.4e-47
AUV67165.1|1108327_1109098_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	67.5	6.7e-95
AUV67166.1|1109161_1110754_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	86.6	5.2e-275
AUV67167.1|1111144_1112341_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	87.2	5.5e-197
AUV67168.1|1112434_1113343_+	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	80.2	1.3e-108
AUV67169.1|1113621_1114458_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	74.7	6.3e-123
AUV67170.1|1114522_1114876_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	30.8	2.2e-05
AUV67171.1|1114872_1115238_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	59.3	6.9e-34
AUV67172.1|1115330_1115636_-	hypothetical protein	NA	NA	NA	NA	NA
AUV67173.1|1115899_1116613_+	transaldolase	NA	M1PR54	Cyanophage	35.0	5.0e-20
AUV67174.1|1116833_1117304_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	41.2	1.7e-16
AUV67175.1|1117287_1117734_-	competence protein ComK	NA	NA	NA	NA	NA
AUV67176.1|1117735_1118212_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	47.4	3.6e-30
AUV67177.1|1118468_1118690_+	hypothetical protein	NA	NA	NA	NA	NA
AUV67178.1|1118897_1119749_+	autolysin	NA	A0A1J0MFB0	Staphylococcus_phage	36.9	1.7e-35
AUV67179.1|1119955_1121272_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	32.0	1.2e-43
AUV67180.1|1121582_1123073_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	80.7	9.8e-18
AUV67181.1|1123507_1124551_+	riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	62.4	6.2e-128
AUV67182.1|1124557_1125190_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	68.1	5.5e-79
AUV67183.1|1125205_1126387_+	riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	73.5	4.7e-172
AUV67184.1|1126398_1126857_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	85.3	7.8e-59
AUV67185.1|1126908_1127910_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	71.2	2.5e-134
AUV67186.1|1128134_1128962_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AUV67187.1|1129403_1130576_+|transposase	IS256 family transposase IS256	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
AUV67188.1|1130762_1131164_+	transcriptional regulator	NA	NA	NA	NA	NA
AUV67189.1|1131303_1131864_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	72.4	3.3e-75
AUV67190.1|1131860_1132820_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	85.4	1.0e-68
AUV67191.1|1132930_1134118_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	79.2	3.9e-179
AUV67192.1|1134416_1136831_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	86.2	0.0e+00
AUV67193.1|1136851_1137163_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	72.8	2.8e-36
AUV67194.1|1137389_1143860_+	YSIRK signal domain/LPXTG anchor domain surface protein	NA	A0A2H4PQU6	Staphylococcus_phage	29.6	2.0e-11
>prophage 2
CP024809	Staphylococcus haemolyticus strain 83131A chromosome, complete genome	2593983	1412377	1424414	2593983		uncultured_Mediterranean_phage(25.0%)	13	NA	NA
AUV67438.1|1412377_1413286_-	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	31.7	3.4e-05
AUV67439.1|1413367_1413910_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AUV67440.1|1414014_1414461_+	transcriptional repressor	NA	NA	NA	NA	NA
AUV67441.1|1414560_1415448_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	30.7	3.6e-36
AUV67442.1|1415550_1416072_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
AUV67443.1|1416165_1416897_+	segregation and condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	24.4	1.2e-08
AUV67444.1|1416889_1417429_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	31.2	1.2e-10
AUV67445.1|1418313_1419039_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	41.3	4.1e-46
AUV67446.1|1419019_1420777_+	two-component sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	32.3	3.7e-24
AUV67447.1|1421116_1421659_+	ECF transporter S component	NA	NA	NA	NA	NA
AUV67448.1|1421730_1421979_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	49.3	5.8e-16
AUV67449.1|1422088_1423042_+	hypothetical protein	NA	NA	NA	NA	NA
AUV67450.1|1423034_1424414_+	ATP-dependent DNA helicase RecQ	NA	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	33.3	3.8e-56
>prophage 3
CP024809	Staphylococcus haemolyticus strain 83131A chromosome, complete genome	2593983	1607692	1678006	2593983	portal,head,integrase,terminase,tail,tRNA,capsid,holin,transposase,protease	Staphylococcus_phage(67.27%)	82	1645408:1645467	1679975:1681301
AUV68524.1|1607692_1608052_-	hypothetical protein	NA	A0A1J0MFV1	Staphylococcus_phage	44.8	9.2e-23
AUV67605.1|1608146_1608899_-	hypothetical protein	NA	Q4ZE35	Staphylococcus_virus	61.6	4.1e-73
AUV67606.1|1609068_1609248_-	hypothetical protein	NA	NA	NA	NA	NA
AUV67607.1|1609514_1609727_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	62.3	6.4e-16
AUV67608.1|1610110_1610842_-	hypothetical protein	NA	A7YGY5	Staphylococcus_virus	36.4	6.7e-36
AUV67609.1|1610848_1611622_-	hypothetical protein	NA	Q4ZAU0	Staphylococcus_virus	41.0	5.6e-49
AUV67610.1|1611803_1612721_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6JNM6	Staphylococcus_phage	61.5	1.5e-64
AUV68525.1|1612767_1613151_-|holin	holin	holin	H9A0W5	Staphylococcus_phage	38.6	3.1e-16
AUV67611.1|1613212_1614490_-	DUF2479 domain-containing protein	NA	A0A1J0MFQ3	Staphylococcus_phage	57.2	2.6e-136
AUV67612.1|1614507_1615536_-	SGNH/GDSL hydrolase family protein	NA	Q8LTH0	Staphylococcus_virus	56.1	2.3e-98
AUV67613.1|1615546_1616128_-	hypothetical protein	NA	A0A1J0MFH9	Staphylococcus_phage	50.0	5.9e-27
AUV67614.1|1616108_1616327_-	hypothetical protein	NA	A0A1J0MF94	Staphylococcus_phage	69.4	1.8e-05
AUV67615.1|1616323_1617484_-	peptidase	NA	A0A0K1LL06	Staphylococcus_phage	42.1	2.4e-112
AUV67616.1|1617494_1618322_-|tail	phage tail family protein	tail	A0A2I6PDE7	Staphylococcus_phage	60.1	2.0e-97
AUV67617.1|1618321_1624270_-|tail	phage tail tape measure protein	tail	A0A2I6PDS2	Staphylococcus_phage	59.7	0.0e+00
AUV67618.1|1624287_1624461_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	46.4	8.4e-06
AUV67619.1|1624511_1624853_-	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	71.2	9.6e-38
AUV67620.1|1624896_1625127_-|tail	phage tail protein	tail	W5RA14	Staphylococcus_phage	39.2	1.6e-07
AUV67621.1|1625142_1625898_-|tail	phage tail protein	tail	A0A2K9VBP7	Staphylococcus_phage	70.6	1.2e-85
AUV67622.1|1625937_1626333_-	hypothetical protein	NA	A0A0K1LKC0	Staphylococcus_phage	58.0	2.7e-39
AUV67623.1|1626329_1626737_-	hypothetical protein	NA	A0A2I6PF54	Staphylococcus_phage	57.1	5.0e-33
AUV67624.1|1626733_1627066_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	55.0	1.8e-28
AUV67625.1|1627075_1627354_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	64.1	2.1e-27
AUV67626.1|1627424_1628579_-|capsid	phage major capsid protein	capsid	A0A2I6PDD7	Staphylococcus_phage	70.0	1.9e-149
AUV67627.1|1628591_1629311_-|protease	Clp protease ClpP	protease	M1TAZ4	Staphylococcus_phage	67.3	4.3e-88
AUV67628.1|1629267_1630533_-|portal	phage portal protein	portal	A0A2I6PF26	Staphylococcus_phage	79.7	5.1e-193
AUV67629.1|1630537_1632229_-|terminase	terminase large subunit	terminase	M9QX14	Staphylococcus_phage	84.2	1.5e-288
AUV67630.1|1632218_1632527_-|terminase	phage terminase small subunit P27 family	terminase	U5U414	Staphylococcus_phage	82.4	5.4e-40
AUV67631.1|1632666_1632981_-	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	74.0	3.0e-38
AUV67632.1|1633132_1633567_-	transcriptional regulator	NA	A7TWI7	Staphylococcus_phage	77.6	4.1e-57
AUV67633.1|1633587_1634241_-	hypothetical protein	NA	NA	NA	NA	NA
AUV67634.1|1634287_1634752_-	hypothetical protein	NA	NA	NA	NA	NA
AUV67635.1|1634835_1635321_+	hypothetical protein	NA	NA	NA	NA	NA
AUV67636.1|1635327_1635639_-	hypothetical protein	NA	A0A2H4JF73	uncultured_Caudovirales_phage	78.6	2.5e-40
AUV67637.1|1635639_1636086_-	hypothetical protein	NA	NA	NA	NA	NA
AUV67638.1|1636082_1636766_-	hypothetical protein	NA	A0A2H4JEF6	uncultured_Caudovirales_phage	75.2	4.0e-99
AUV68526.1|1636768_1637092_-	DUF3310 domain-containing protein	NA	A0A1W6JQJ4	Staphylococcus_phage	71.4	7.5e-40
AUV67639.1|1637220_1637445_-	hypothetical protein	NA	A0A1W6JQG7	Staphylococcus_phage	43.8	3.4e-07
AUV67640.1|1637428_1637614_-	hypothetical protein	NA	A0A2H4JG42	uncultured_Caudovirales_phage	69.4	6.8e-14
AUV67641.1|1637614_1638019_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A2H4J5E6	uncultured_Caudovirales_phage	79.1	7.1e-56
AUV67642.1|1638031_1638274_-	hypothetical protein	NA	A0A2H4J5E3	uncultured_Caudovirales_phage	79.7	4.3e-32
AUV67643.1|1638263_1638428_-	hypothetical protein	NA	A0A2H4JD60	uncultured_Caudovirales_phage	75.9	1.9e-15
AUV67644.1|1638424_1639231_-	DNA replication protein DnaC	NA	A0A2I6PDV5	Staphylococcus_phage	69.3	6.3e-96
AUV67645.1|1640059_1640848_+	hypothetical protein	NA	NA	NA	NA	NA
AUV67646.1|1640837_1641518_-	hypothetical protein	NA	A0A2H4J6I4	uncultured_Caudovirales_phage	82.0	9.1e-104
AUV67647.1|1641518_1642067_-	HNH endonuclease	NA	A0A1W6JNF8	Staphylococcus_phage	82.4	4.9e-84
AUV67648.1|1642079_1642514_-	single-stranded DNA-binding protein	NA	I1W659	Staphylococcus_phage	63.7	5.3e-49
AUV67649.1|1642510_1643185_-	single-stranded DNA-binding protein	NA	Q4ZCA1	Staphylococcus_virus	70.5	4.1e-80
AUV67650.1|1643185_1643671_-	hypothetical protein	NA	H9A0R4	Staphylococcus_phage	82.6	1.4e-66
AUV67651.1|1643654_1643918_-	hypothetical protein	NA	A0A1W6JP63	Staphylococcus_phage	48.2	4.0e-15
AUV67652.1|1643986_1644166_-	hypothetical protein	NA	A0A2H4JAZ6	uncultured_Caudovirales_phage	59.3	5.4e-08
AUV67653.1|1644178_1644457_-	hypothetical protein	NA	NA	NA	NA	NA
AUV67654.1|1644515_1644707_-	XRE family transcriptional regulator	NA	A0A2I6PEL6	Staphylococcus_phage	69.8	8.6e-20
AUV67655.1|1644869_1645211_+	XRE family transcriptional regulator	NA	A0A2I6PEN2	Staphylococcus_phage	59.6	4.5e-27
1645408:1645467	attL	AGTCAAGTCCAGACTCCTGTGTAAAATGCTATACAATGTTTTTACCATTTCTACTTATCA	NA	NA	NA	NA
AUV67656.1|1645457_1646630_-|transposase	IS256 family transposase IS256	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
AUV67657.1|1647078_1647768_+	VanZ family protein	NA	NA	NA	NA	NA
AUV67658.1|1647834_1648959_+|integrase	site-specific integrase	integrase	A0A0C5AN64	Paenibacillus_phage	29.7	2.7e-36
AUV67659.1|1649102_1650443_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AUV67660.1|1650463_1650829_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AUV67661.1|1651031_1652270_-	hypothetical protein	NA	NA	NA	NA	NA
AUV67662.1|1652289_1653528_-	GTPase HflX	NA	NA	NA	NA	NA
AUV67663.1|1653637_1654114_+	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	42.0	1.1e-26
AUV67664.1|1654306_1654549_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
AUV67665.1|1654502_1655501_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AUV67666.1|1655516_1656440_-	lysophospholipase	NA	NA	NA	NA	NA
AUV67667.1|1656732_1658406_-	aerobic glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AUV67668.1|1658558_1660058_-	glycerol kinase	NA	NA	NA	NA	NA
AUV67669.1|1660188_1661007_-	aquaporin	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.7	1.6e-30
AUV67670.1|1661233_1661767_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
AUV67671.1|1661782_1663810_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	38.6	1.5e-53
AUV67672.1|1663822_1666474_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	25.8	5.6e-40
AUV67673.1|1666740_1667232_-	energy coupling factor transporter S component ThiW	NA	NA	NA	NA	NA
AUV67674.1|1667253_1667619_-	hypothetical protein	NA	NA	NA	NA	NA
AUV67675.1|1667619_1669164_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AUV67676.1|1669462_1669759_-	hypothetical protein	NA	NA	NA	NA	NA
AUV67677.1|1669819_1670431_-	hypothetical protein	NA	A0A0D3MVF0	Staphylococcus_phage	43.3	3.0e-42
AUV67678.1|1670657_1671524_-	2-oxoacid ferredoxin oxidoreductase	NA	NA	NA	NA	NA
AUV67679.1|1671524_1673285_-	2-oxoacid:acceptor oxidoreductase subunit alpha	NA	NA	NA	NA	NA
AUV67680.1|1673419_1674214_-	metallophosphoesterase	NA	NA	NA	NA	NA
AUV67681.1|1674372_1674588_+	hypothetical protein	NA	NA	NA	NA	NA
AUV67682.1|1674859_1676419_-	ribonuclease Y	NA	NA	NA	NA	NA
AUV67683.1|1676833_1678006_+|transposase	IS256 family transposase IS256	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
1679975:1681301	attR	AGTCAAGTCCAGACTCCTGTGTAAAATGCTATACAATGTTTTTACCATTTCTACTTATCAAAATTGATGTATTTTCTTGAAGAATAAATCCATTCATCATGTAGGTCCATAAGAACGGCTCCAATTAAGCGATTGGCTGATGTTTGATTGGGGAAGATGCGAATAATCTTTTCTCTTCTGCGTACTTCTTGATTCAGTCGTTCAATTAGATTGGTACTCTTTAGTCGATTGTGGGAATTTCCTTGTACGGTATATTGAAAGGCGTCTTCGAATCCATCATCCAATGATGCGCAAGCTTTTGAATATTTTGGTTGATCGATATAATCATGAATCAATCGATTTTTAGCCTCACGCGCTAAGTTAATATCTGTGAACTTAAAAATTCCTTTAACAGCTTCTCTGAAAGATTTTGAATTTTTTTTAGGAATGGTGGTAAAGATATTTCTTAGGAAGTGAACTTGGCATCTTTGCCAACTTACGTTGGTGAAGGATTTTCTAATGGCAGAGACTAATCCTTTGTGCGCATCAGAAATAACGAGTTCCGTACCTTGTAAACCGCGTTCTTTTAGGTATTCAAAAAATGTTGTCCAGGTCTCTTCGCTTTCGCCACTTTGAATCATGAAGCCGATAATTTCACGGTCGCCATCTTTGGTTATTCCAATCGCTATATGACAGCTTTTTGAGAGTACTCGATTTTCTTCTCGTACTTTTATATAGAGTACATCGGTCATTAAGTAAGGATAATTTTTTTCTGATAATAAACGATTCTGCCACTCGTTAACCATAGGTTCTAGCTGTTCTGTTAAGCTAGAAACGAAGGACTTAGAGACGGATTTACCACAAAGTTCTTCCACAATTTTTGATACTTTACGAGTTGAAACGCCTGATACATACATTTCCAACATTGAAGCCATGAGGGCTTTTTCGTTTCGTTGATAACGTTCAAACACTGTGGGTGAAAAATGGCCATCACGTGTTCTGGGTACTTTTAATTCTAGCGTGCCTACACGTGTCGTAAAGCTGCGCTCATAATAGCCATTTCGTTGACTTTGTCGGTTTTCTGTTCGTTCATATTCTTTTGCTTGAATATATTCTGTTCGTTGATTTTCCATTAGTTGATTAAATACCGTTGTTAAAATATTTTTAGAAACGTCATCCTTTACAGAATATTCAATAATGCTTTGAATCTCTTCGCTTTTCAGTGTAAAATGTACTTGGGTCATGTAAAAGTCCTCCTGGGTATGTTTTTGTCGTTAAAAACATTGTACCGTAAAAGGACTGTTATATGGCCTTTTTACTTTTACACAATTATACGGACTTTATCTTA	NA	NA	NA	NA
>prophage 4
CP024809	Staphylococcus haemolyticus strain 83131A chromosome, complete genome	2593983	1888139	1896609	2593983		Synechococcus_phage(33.33%)	9	NA	NA
AUV67871.1|1888139_1888706_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.3	4.7e-29
AUV67872.1|1888705_1889737_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	45.5	1.7e-69
AUV67873.1|1889729_1891214_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.6	7.7e-47
AUV67874.1|1891192_1893382_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.5	8.2e-138
AUV67875.1|1893374_1894046_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
AUV67876.1|1894047_1894308_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
AUV67877.1|1894307_1895012_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	42.5	2.8e-47
AUV67878.1|1895015_1896140_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AUV67879.1|1896126_1896609_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	46.0	8.0e-22
>prophage 5
CP024809	Staphylococcus haemolyticus strain 83131A chromosome, complete genome	2593983	2123038	2136971	2593983		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
AUV68088.1|2123038_2123821_-	iron ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	29.6	1.4e-15
AUV68089.1|2123817_2124777_-	iron ABC transporter permease	NA	A0A2H4J116	uncultured_Caudovirales_phage	72.0	5.7e-11
AUV68090.1|2124766_2125735_-	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	88.5	1.7e-151
AUV68091.1|2125984_2126953_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	94.7	1.4e-177
AUV68092.1|2127080_2129186_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	94.0	0.0e+00
AUV68093.1|2129148_2129547_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	75.8	1.9e-53
AUV68094.1|2130320_2131220_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AUV68095.1|2131225_2131726_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	70.8	1.7e-51
AUV68096.1|2132026_2133532_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.7	1.9e-61
AUV68536.1|2134208_2135135_+	lipid kinase	NA	NA	NA	NA	NA
AUV68097.1|2135207_2135741_-	5'(3')-deoxyribonucleotidase	NA	A0A0A0PKY7	Bacillus_phage	39.0	8.0e-31
AUV68098.1|2135915_2136971_-	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	26.7	2.8e-19
>prophage 6
CP024809	Staphylococcus haemolyticus strain 83131A chromosome, complete genome	2593983	2151267	2159415	2593983	transposase	Pandoravirus(12.5%)	9	NA	NA
AUV68110.1|2151267_2152413_-	aminodeoxychorismate synthase component I	NA	S4VNU7	Pandoravirus	34.9	5.4e-24
AUV68111.1|2152396_2152990_-	type 1 glutamine amidotransferase	NA	A0A0P0IKJ1	Acinetobacter_phage	40.1	7.1e-36
AUV68112.1|2153352_2154024_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	55.4	4.1e-64
AUV68113.1|2154025_2154445_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	26.9	2.2e-07
AUV68114.1|2154444_2155161_+	7-carboxy-7-deazaguanine synthase QueE	NA	E7DN68	Pneumococcus_phage	41.9	1.6e-50
AUV68115.1|2155265_2155877_+	hypothetical protein	NA	NA	NA	NA	NA
AUV68116.1|2155927_2156917_-	glycosyltransferase	NA	A8CG95	Salmonella_phage	41.2	5.3e-60
AUV68117.1|2157205_2158522_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	32.0	5.4e-44
AUV68118.1|2158575_2159415_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	44.4	3.6e-62
>prophage 7
CP024809	Staphylococcus haemolyticus strain 83131A chromosome, complete genome	2593983	2222018	2273299	2593983	tRNA,transposase,integrase	Staphylococcus_phage(42.86%)	51	2221918:2221977	2269618:2270941
2221918:2221977	attL	GATAAAGTCCGTATAATTGTGTAAAAGTAAAAAGGCCATATAACAGTCCTTTTACGGTAC	NA	NA	NA	NA
AUV68177.1|2222018_2223191_+|transposase	IS256 family transposase IS256	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
AUV68178.1|2223298_2224591_+	DUF1958 domain-containing protein	NA	NA	NA	NA	NA
AUV68179.1|2224845_2225244_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	38.5	6.0e-15
AUV68180.1|2225342_2226407_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	37.6	5.6e-07
AUV68181.1|2226403_2227492_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
AUV68182.1|2227601_2228414_-	ABC transporter permease	NA	NA	NA	NA	NA
AUV68183.1|2228740_2229535_+	teichoic acid export protein ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	27.3	9.9e-09
AUV68184.1|2229631_2230396_-	glycosyltransferase	NA	NA	NA	NA	NA
AUV68185.1|2230616_2231360_+	hypothetical protein	NA	NA	NA	NA	NA
AUV68186.1|2231440_2232757_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	33.3	1.6e-43
AUV68537.1|2232927_2233575_-	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
AUV68187.1|2233747_2235790_-	sodium:proton antiporter	NA	NA	NA	NA	NA
AUV68188.1|2236169_2237411_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AUV68189.1|2237509_2237749_+	DUF3923 domain-containing protein	NA	NA	NA	NA	NA
AUV68190.1|2238154_2238544_+	hypothetical protein	NA	NA	NA	NA	NA
AUV68191.1|2238608_2239124_-	cation:proton antiporter	NA	NA	NA	NA	NA
AUV68192.1|2239098_2239401_-	cation:proton antiporter	NA	NA	NA	NA	NA
AUV68193.1|2239397_2239880_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
AUV68194.1|2239876_2241376_-	Na+/H+ antiporter subunit D	NA	NA	NA	NA	NA
AUV68195.1|2241365_2241716_-	antiporter	NA	NA	NA	NA	NA
AUV68196.1|2241712_2242138_-	Na(+)/H(+) antiporter subunit B	NA	NA	NA	NA	NA
AUV68197.1|2242124_2244527_-	cation:proton antiporter	NA	NA	NA	NA	NA
AUV68198.1|2244555_2245113_-|integrase	integrase	integrase	A0A141E172	Streptococcus_phage	37.0	2.4e-25
AUV68199.1|2245255_2245462_+	hypothetical protein	NA	NA	NA	NA	NA
AUV68200.1|2245496_2245718_+	DUF2922 domain-containing protein	NA	NA	NA	NA	NA
AUV68201.1|2246019_2246946_+	hypothetical protein	NA	NA	NA	NA	NA
AUV68202.1|2247095_2248022_+	HlyD family secretion protein	NA	NA	NA	NA	NA
AUV68203.1|2248345_2248720_+	transcriptional regulator	NA	NA	NA	NA	NA
AUV68204.1|2248941_2250258_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	32.0	5.4e-44
AUV68205.1|2250459_2251269_-	alpha/beta hydrolase	NA	A0A2K9KZN8	Tupanvirus	34.0	5.5e-07
AUV68206.1|2251545_2252262_-	hypothetical protein	NA	NA	NA	NA	NA
AUV68207.1|2252445_2252952_-	hypothetical protein	NA	NA	NA	NA	NA
AUV68208.1|2253105_2253900_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AUV68209.1|2253901_2254606_-	HAD family hydrolase	NA	NA	NA	NA	NA
AUV68210.1|2254705_2255659_-	iron ABC transporter permease	NA	NA	NA	NA	NA
AUV68211.1|2255960_2256872_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUV68212.1|2257054_2257552_-	DUF805 domain-containing protein	NA	NA	NA	NA	NA
AUV68213.1|2257617_2258382_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AUV68214.1|2258480_2259119_-	endonuclease III	NA	NA	NA	NA	NA
AUV68215.1|2259203_2260865_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AUV68216.1|2260861_2261290_-	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
AUV68217.1|2263534_2263753_+	hypothetical protein	NA	NA	NA	NA	NA
AUV68218.1|2264211_2264370_+	hypothetical protein	NA	NA	NA	NA	NA
AUV68219.1|2264420_2264669_+	hypothetical protein	NA	NA	NA	NA	NA
AUV68220.1|2265212_2266385_+|transposase	IS256 family transposase IS256	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
AUV68538.1|2266441_2266834_+	N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	6.9e-72
AUV68221.1|2266834_2268274_+	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	NA	A0A1X9I6C2	Streptococcus_phage	100.0	3.8e-285
AUV68222.1|2268403_2269576_-|transposase	IS256 family transposase IS256	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
AUV68223.1|2269829_2270600_-	hypothetical protein	NA	NA	NA	NA	NA
AUV68224.1|2270601_2271297_-	lantibiotic ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	39.0	8.8e-38
2269618:2270941	attR	GTACCGTAAAAGGACTGTTATATGGCCTTTTTACTTTTACACAATTATACGGACTTTATCGAAAAAATAGGCGACAATAGCCACACCTACAAAAATCCCCTCACTATTTGCGGTAGTGAGGGGATTGGTGTATCCATGTTGGATTCTTTGTTACGTGTATTATAACATCATAGTGTAGAGAAATGCAAAATTATAAAGTGTGTTGAGTTAGATTAGACATTTTTCTTTTTAAAGACAAATACTACGAGGATTAAGAAAATAATAATATAAACAATATTACCAATAAATAATTCATGCAGTTCTAATTTTGTGAATTTTTTCATGTTTTTATCAACAATTTGAACCATAATATTCATCATACTAATAGGGTTCCATTTTAACCATTCCCATTTATCTACAACAATTGTTAATATACCTGACAAAATTGAAGTGGCGAAATACAATACAATACCGACAGCAATAGAGACACCGGGACTTTTCATTGCACATGAAATTAATAAGGTGATACTTAAGACTAACCATGTTCCAACATATGTACCTAGTCCAGTTAATAACATTTTACTTAATAACGATAACGCATCACCCTTACTTTCAAGGAGATTGATATCGTTGAAGAAAATAGCCCATAGAATAATTCCTACAACAATACTAATAATAAAATACAGTAGTGAAAAAAGTATTAATGTAATAATTTTACTAATAATAATGCTTGTTCTCGTATATTTTCGATAGAGAAGATTTTTAATTGTACCATGATAAAACTCCATTGAAATAATGGTGCTGGCTTGAATAATTAATAAAAAGATAAACCATGAAAAACCACTAAATGCTGATTCAATAGATGATTGTGGAGAAAAAATATCATCATAGTTTTTAGATATTATAGCTTGAACAACCATTAATAACATAATGATAATTGGTATAATAAACGTCGATTTCTTTTTAAACAATTTAAAACATTCTTGCTTAATTAAAGTGCCCATTTTACGATTGATCCTCCTTATCAATGATACTTAATAATACATTTTCTAAATCGTTATCTTTATATTGGTTTAATTCTTCTTCGGTAGTTTCAGTAACAATTTTACCTTTGTTGATGATAAGGATAGAATTGGTGATTTTTACTAACTCACTTAATATATGGCTAGAAATTAAAAAGGTAATGCCCTCTTCCGCTTTTTTTACAATGAGTTCTCTAACATCTCTTACAGCCCTAGGATCTAACCCATTCATAGGTTCATCTAAAATAATTAATTGGGGTTGATTTAAGAAGGCTATTGCAATACCTAATTTTTGTTTCATACCCAAGGAATATGTTTTTGCT	NA	NA	NA	NA
AUV68225.1|2271832_2273299_+	ABC-F type ribosomal protection protein Msr(A)	NA	A0A2I4R674	Erysipelothrix_phage	37.9	3.9e-67
>prophage 8
CP024809	Staphylococcus haemolyticus strain 83131A chromosome, complete genome	2593983	2497518	2542604	2593983	transposase,integrase,terminase	Staphylococcus_phage(26.32%)	47	2501587:2501646	2545823:2546612
AUV68406.1|2497518_2497788_-	hypothetical protein	NA	A0A2H4JBE4	uncultured_Caudovirales_phage	94.4	1.0e-42
AUV68407.1|2497793_2498366_-|terminase	terminase small subunit	terminase	A0A2H4JBF3	uncultured_Caudovirales_phage	95.3	2.1e-98
AUV68408.1|2498367_2498706_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JEH8	uncultured_Caudovirales_phage	82.1	8.9e-44
AUV68409.1|2498702_2499152_-	pathogenicity island protein	NA	A0A2H4JBD6	uncultured_Caudovirales_phage	86.4	3.9e-63
AUV68410.1|2499374_2500049_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.7	4.4e-127
AUV68411.1|2500069_2500804_-	RepB family plasmid replication initiator protein	NA	NA	NA	NA	NA
AUV68412.1|2501315_2501405_-	erm Leader peptide	NA	NA	NA	NA	NA
2501587:2501646	attL	CGGTTCTGTTGCAAAGTTGAATTTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATG	NA	NA	NA	NA
AUV68413.1|2501643_2502318_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.7	4.4e-127
AUV68414.1|2502358_2502547_-	hypothetical protein	NA	A0A1B0RXM3	Streptococcus_phage	98.2	4.3e-24
AUV68415.1|2502570_2502786_-	WYL domain-containing protein	NA	E4ZFP5	Streptococcus_phage	98.6	3.4e-33
AUV68416.1|2503418_2504213_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
AUV68417.1|2504305_2504848_-	streptothricin N-acetyltransferase Sat4	NA	A0A1B0RXL7	Streptococcus_phage	99.4	2.6e-93
AUV68418.1|2505607_2505886_-	hypothetical protein	NA	NA	NA	NA	NA
AUV68419.1|2505888_2506320_-	ParA family protein	NA	NA	NA	NA	NA
AUV68420.1|2506351_2507026_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.7	4.4e-127
AUV68421.1|2507135_2507792_+	replication protein RepB	NA	NA	NA	NA	NA
AUV68422.1|2508473_2508797_-	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AUV68423.1|2508901_2509576_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	1.5e-127
AUV68424.1|2510042_2510888_-	penicillin-hydrolyzing class A beta-lactamase PC1	NA	A0A1B0VBP7	Salmonella_phage	34.0	1.5e-31
AUV68425.1|2510994_2512752_+	beta-lactam sensor/signal transducer BlaR1	NA	NA	NA	NA	NA
AUV68426.1|2512741_2513122_+	penicillinase repressor BlaI	NA	NA	NA	NA	NA
AUV68427.1|2513385_2513964_+	transposon DNA-invertase	NA	A0A0A7NPV4	Enterobacteria_phage	51.7	6.4e-42
AUV68428.1|2514552_2516046_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AUV68429.1|2516395_2517526_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
AUV68430.1|2517727_2518150_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AUV68431.1|2518793_2519396_-	hypothetical protein	NA	NA	NA	NA	NA
AUV68432.1|2519607_2520300_-	nucleotidyltransferase	NA	NA	NA	NA	NA
AUV68433.1|2521496_2521880_-	transcriptional regulator	NA	NA	NA	NA	NA
AUV68434.1|2522119_2522650_-	N-acetyltransferase	NA	A0A1P8CWJ6	Bacillus_phage	59.3	5.7e-53
AUV68541.1|2523253_2523379_-	Rep protein	NA	NA	NA	NA	NA
AUV68435.1|2524628_2524862_-	hypothetical protein	NA	NA	NA	NA	NA
AUV68436.1|2525308_2525938_+	LysE family translocator	NA	NA	NA	NA	NA
AUV68437.1|2525961_2526540_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
AUV68438.1|2526639_2527266_-	hypothetical protein	NA	NA	NA	NA	NA
AUV68439.1|2527606_2529130_-	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.4	7.1e-40
AUV68440.1|2529144_2529714_-	peroxiredoxin	NA	NA	NA	NA	NA
AUV68441.1|2530134_2530914_-	2-keto-4-pentenoate hydratase	NA	NA	NA	NA	NA
AUV68442.1|2531071_2531827_+	oxygen-insensitive NADPH nitroreductase	NA	NA	NA	NA	NA
AUV68443.1|2531910_2533299_-	L-cystine transporter	NA	NA	NA	NA	NA
AUV68542.1|2533586_2534237_-	DNA-binding protein	NA	NA	NA	NA	NA
AUV68444.1|2534355_2535024_-	hypothetical protein	NA	NA	NA	NA	NA
AUV68445.1|2535171_2535579_-	hypothetical protein	NA	NA	NA	NA	NA
AUV68446.1|2536157_2536739_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
AUV68447.1|2536735_2538004_+	purine permease	NA	NA	NA	NA	NA
AUV68448.1|2538042_2539509_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	39.0	2.7e-92
AUV68449.1|2539682_2541224_+	GMP synthase (glutamine-hydrolyzing)	NA	A0A1V0SH76	Hokovirus	32.6	7.2e-24
AUV68450.1|2541389_2542604_-|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	46.1	1.4e-91
2545823:2546612	attR	CATACAGAAGACTCCTTTTTGTTAAAATTATACTATAAATTCAACTTTGCAACAGAACCGAAAAATTAAATTCAGGAACGACAGAAATATTTGAACAACGTATGCCTAACCGTCAAGTGTTAAGCCATATTGGTTATATGGGGCAGAGTGATGCACTCTACGAATCATTATCCGCTAAAGAGAATCTTATCTTTTTTGGTCATCTAGCGGGAATAAAAGGCAAACAGTTAATAAGTAGTATTAATCATAATATGGGGCTAGTTAATTTGGAAGAGAAATTGAATAAGACTGTTAATACATTTTCAGGTGGTATGAAACGTCGTTTATCATTAGCAATCACACTTTTATCTGACCCAAGTCTCATCATACTAGATGAACCTACAGTAGGTATTGACCCTAAATTAAGACAACAAATATGGAATCAATTAAAGTATCTAACTAAACAAGGTAAAGCGGTTATCGTTACGACACATGTCATGGATGAAGCTGAACGTTGTGATAAAATCGGCCTCATTGTAGAGGGTCGACTCTTCGCAATAGGTACACCAAATGAATTAAAACAAAAATTCAATGTTGAAACAATAGAAGAAGTCTTTATTAAAGGTGAGGAGGTTAAAAATCAATGAAACTTTTAGCAATGATTCAACGTGTCATCATTGAATTATTAAAAGATAAACGTACACTAGCACTTATGTTTTTAGCACCTTTATTAGTCCTTACATTAATGTATTTTATTTTTAATTCAGATGAAGATACAACATTAACTATTGGTATTGACAACTCTGTATCA	NA	NA	NA	NA
