The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026197	Enterobacteriaceae bacterium ENNIH3 chromosome, complete genome	5904433	141410	205603	5904433	holin,head,capsid,tail,integrase,tRNA,plate,portal,terminase	Escherichia_phage(27.27%)	68	163416:163465	205784:205833
AUU87705.1|141410_142424_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.9	1.0e-106
AUU87706.1|142660_142876_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
AUU87707.1|143115_144861_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	38.5	4.6e-75
AUU87708.1|145019_146867_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.7	8.4e-35
AUU87709.1|147440_147644_+	hypothetical protein	NA	NA	NA	NA	NA
AUU87710.1|147722_148874_+	capsule biosynthesis protein	NA	NA	NA	NA	NA
AUU87711.1|148908_150585_+	polysialic acid transporter	NA	NA	NA	NA	NA
AUU92844.1|150698_152723_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AUU87712.1|152749_154012_+	capsular biosynthesis protein	NA	NA	NA	NA	NA
AUU87713.1|154237_155104_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87714.1|155170_156349_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87715.1|157125_159699_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87716.1|159764_160757_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
AUU87717.1|160780_161446_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.4	1.8e-08
AUU92845.1|161442_162219_-	ABC transporter permease	NA	NA	NA	NA	NA
163416:163465	attL	ACTCATAATCGCTTGGTCGCTGGTTCAAACCCAGCAGGGGCCACCAAATT	NA	NA	NA	NA
AUU87718.1|163604_163823_-	transcriptional regulator	NA	A0A2I8TV89	Erwinia_phage	84.5	3.0e-32
AUU87719.1|163916_164324_+	hypothetical protein	NA	NA	NA	NA	NA
AUU87720.1|164363_165548_-	hypothetical protein	NA	Q7Y4C6	Escherichia_virus	77.5	1.7e-161
AUU87721.1|165547_166024_-|tail	phage tail protein	tail	A0A0F7LDE8	Escherichia_phage	71.3	3.9e-61
AUU87722.1|166035_168507_-|tail	phage tail tape measure protein	tail	Q7Y4C8	Escherichia_virus	64.2	3.2e-255
AUU87723.1|168499_168619_-|tail	GpE family phage tail protein	tail	A0A0F7LCR6	Escherichia_phage	92.3	1.2e-14
AUU87724.1|168651_168927_-|tail	phage tail assembly protein	tail	A0A0F7LDQ8	Escherichia_phage	87.9	1.5e-36
AUU87725.1|168987_169506_-|tail	phage major tail tube protein	tail	A0A0F7LDZ1	Escherichia_phage	93.6	3.1e-88
AUU87726.1|169518_170709_-|tail	phage tail protein	tail	A0A0F7LBW9	Escherichia_phage	89.1	2.1e-204
AUU87727.1|170838_171384_-|tail	phage tail protein	tail	U5N0T1	Enterobacteria_phage	45.1	9.4e-35
AUU87728.1|173340_173871_-|tail	phage tail protein I	tail	Q858V5	Yersinia_virus	90.3	1.6e-95
AUU87729.1|173863_174772_-|plate	baseplate assembly protein	plate	A0A0F7LCQ9	Escherichia_phage	84.8	2.1e-140
AUU87730.1|174776_175124_-|plate	baseplate assembly protein	plate	A0A0F7LDQ1	Escherichia_phage	79.1	1.7e-45
AUU87731.1|175120_175762_-|plate	phage baseplate assembly protein V	plate	Q6K1H6	Salmonella_virus	84.5	4.5e-97
AUU87732.1|175827_176280_-	phage virion morphogenesis protein	NA	O80313	Escherichia_phage	67.8	6.5e-50
AUU87733.1|176272_176740_-|tail	phage tail protein	tail	A0A0F7LA33	Escherichia_phage	81.3	7.9e-67
AUU87734.1|176702_176948_-|holin	holin	holin	S4TNY4	Salmonella_phage	77.8	2.0e-29
AUU87735.1|176847_177270_-	protein lysB	NA	Q7Y4E2	Escherichia_virus	65.2	1.6e-42
AUU87736.1|177254_177686_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87737.1|177682_178195_-	glycoside hydrolase	NA	A0A218M4K3	Erwinia_phage	80.0	8.7e-75
AUU87738.1|178178_178415_-|holin	holin	holin	A0A218M4L5	Erwinia_phage	51.7	1.5e-10
AUU87739.1|178405_178609_-|tail	phage tail protein	tail	A0A0F7LCN2	Escherichia_phage	79.1	4.7e-24
AUU87740.1|178608_179115_-|head	head completion/stabilization protein	head	M1SNN6	Escherichia_phage	79.8	2.8e-73
AUU87741.1|179211_179970_-|terminase	terminase	terminase	Q94MI7	Enterobacteria_phage	65.9	2.7e-80
AUU87742.1|179973_181122_-|capsid	phage major capsid protein, P2 family	capsid	A0A0M4R4W2	Salmonella_phage	61.2	8.4e-126
AUU87743.1|181158_182016_-|capsid	GPO family capsid scaffolding protein	capsid	Q6K1I7	Salmonella_virus	73.7	1.3e-115
AUU87744.1|182192_183962_+	oxidoreductase	NA	A0A0M4RE51	Salmonella_phage	85.1	3.6e-301
AUU87745.1|183961_184999_+|portal	phage portal protein	portal	Q6K1J0	Salmonella_virus	76.7	7.5e-158
AUU87746.1|185028_185238_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87747.1|185406_186420_+	hypothetical protein	NA	NA	NA	NA	NA
AUU87748.1|186409_187468_+	hypothetical protein	NA	NA	NA	NA	NA
AUU87749.1|187478_188156_+	hypothetical protein	NA	NA	NA	NA	NA
AUU87750.1|188238_188679_-	DinI family protein	NA	A0A218M4I0	Erwinia_phage	75.9	1.2e-51
AUU87751.1|188797_191020_-	replication protein	NA	A0A218M4H2	Erwinia_phage	90.4	0.0e+00
AUU87752.1|191021_191243_-	hypothetical protein	NA	A0A0M4S5Q7	Salmonella_phage	89.0	3.3e-31
AUU87753.1|191242_191470_-	DUF2732 domain-containing protein	NA	A0A0M3UL87	Salmonella_phage	98.7	2.0e-31
AUU87754.1|191537_191876_-	hypothetical protein	NA	A0A218M4I7	Erwinia_phage	94.6	1.6e-53
AUU87755.1|191839_192040_-	DUF2724 domain-containing protein	NA	Q6K1F7	Salmonella_virus	95.5	1.3e-31
AUU87756.1|192047_192557_-	hypothetical protein	NA	Q6K1F8	Salmonella_virus	86.4	1.9e-77
AUU87757.1|192587_192851_-	hypothetical protein	NA	A0A218M4I5	Erwinia_phage	88.5	1.2e-40
AUU87758.1|192981_193554_+	phage repressor protein CI	NA	A0A218M4J1	Erwinia_phage	88.9	1.9e-94
AUU87759.1|193553_194570_+|integrase	integrase	integrase	A0A218M4I3	Erwinia_phage	96.2	4.1e-193
AUU87760.1|194802_197142_-|tail	phage tail tape measure protein	tail	A0A2D1GPC9	Escherichia_phage	44.1	3.1e-151
AUU87761.1|197548_199465_-	peptidase	NA	K7PKX4	Enterobacterial_phage	57.4	3.4e-212
AUU87762.1|199461_199653_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87763.1|200055_201855_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	48.8	3.2e-132
AUU87764.1|201851_202151_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87765.1|202155_202356_-	hypothetical protein	NA	A0A286SGR4	Klebsiella_phage	43.6	1.3e-05
AUU92846.1|202348_202519_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
AUU87766.1|202806_203115_+	hypothetical protein	NA	NA	NA	NA	NA
AUU87767.1|203233_203440_-	DNA-binding protein	NA	NA	NA	NA	NA
AUU87768.1|203537_204182_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87769.1|204178_205603_-|integrase	integrase	integrase	NA	NA	NA	NA
205784:205833	attR	ACTCATAATCGCTTGGTCGCTGGTTCAAACCCAGCAGGGGCCACCAAATT	NA	NA	NA	NA
>prophage 2
CP026197	Enterobacteriaceae bacterium ENNIH3 chromosome, complete genome	5904433	352610	424992	5904433	head,capsid,protease,tail,integrase,tRNA,portal,terminase	uncultured_Caudovirales_phage(52.17%)	75	389498:389515	405440:405457
AUU87907.1|352610_353108_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	54.9	1.5e-26
AUU87908.1|353112_353751_-	stringent starvation protein A	NA	NA	NA	NA	NA
AUU87909.1|354065_354458_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
AUU87910.1|354473_354902_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
AUU87911.1|355188_356313_-	cell division protein ZapE	NA	NA	NA	NA	NA
AUU87912.1|356502_356901_+	hypothetical protein	NA	NA	NA	NA	NA
AUU87913.1|357071_358442_+|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	27.7	1.9e-23
AUU92850.1|358532_359600_+|protease	serine endoprotease DegS	protease	NA	NA	NA	NA
AUU87914.1|359686_360625_-	malate dehydrogenase	NA	NA	NA	NA	NA
AUU87915.1|361029_361500_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
AUU87916.1|361861_362125_+	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
AUU87917.1|362220_362484_+	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
AUU87918.1|362545_362812_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87919.1|362857_364312_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AUU87920.1|364395_366363_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA	NA
AUU87921.1|366368_367301_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA	NA
AUU87922.1|367308_367512_-	protein AaeX	NA	NA	NA	NA	NA
AUU87923.1|367685_368609_+	transcriptional regulator	NA	NA	NA	NA	NA
AUU87924.1|368657_370103_-|protease	metalloprotease TldD	protease	NA	NA	NA	NA
AUU87925.1|370189_373999_-	AsmA2 domain-containing protein	NA	NA	NA	NA	NA
AUU87926.1|374040_375510_-	ribonuclease G	NA	NA	NA	NA	NA
AUU87927.1|375499_376093_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AUU87928.1|376101_376590_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
AUU87929.1|376589_377594_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
AUU87930.1|377659_378703_-	rod shape-determining protein	NA	F2Y0P3	Organic_Lake_phycodnavirus	22.3	6.7e-05
AUU87931.1|379012_380953_-	RNase E specificity factor CsrD	NA	NA	NA	NA	NA
AUU87932.1|381233_382235_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
AUU87933.1|382235_382835_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
AUU87934.1|383340_383817_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AUU87935.1|383827_385177_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AUU87936.1|385291_385534_+	hypothetical protein	NA	NA	NA	NA	NA
AUU87937.1|385523_386975_+	sodium/panthothenate symporter	NA	NA	NA	NA	NA
AUU87938.1|386986_387868_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
AUU87939.1|388226_389192_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AUU87940.1|389215_389512_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
389498:389515	attL	TACGGCATGAACTGATAG	NA	NA	NA	NA
AUU87941.1|389665_389857_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87942.1|389859_391521_-|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	98.4	0.0e+00
AUU87943.1|391504_391861_-|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	99.2	5.5e-60
AUU87944.1|391818_392010_-|terminase	terminase	terminase	NA	NA	NA	NA
AUU87945.1|392136_392580_-	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	83.0	3.5e-72
AUU87946.1|392579_392870_-	hypothetical protein	NA	A0A2H4JD08	uncultured_Caudovirales_phage	80.0	2.3e-40
AUU87947.1|392866_393205_-|head,tail	head-tail adaptor protein	head,tail	A0A2H4JHK5	uncultured_Caudovirales_phage	82.9	1.7e-47
AUU87948.1|393201_394428_-|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	88.3	9.3e-216
AUU87949.1|394429_394990_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	97.8	6.5e-100
AUU87950.1|395041_396208_-|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	93.0	1.5e-202
AUU87951.1|396484_396955_+	hypothetical protein	NA	NA	NA	NA	NA
AUU87952.1|397002_397338_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87953.1|397680_399816_-	DNA primase	NA	A0A1W6JPG0	Morganella_phage	62.4	3.4e-205
AUU87954.1|399815_400196_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87955.1|400192_400561_-	hypothetical protein	NA	A0A2H4JCX7	uncultured_Caudovirales_phage	85.2	6.1e-54
AUU87956.1|400557_400785_-	aminotransferase	NA	A0A2H4JBA1	uncultured_Caudovirales_phage	87.8	7.8e-28
AUU87957.1|400777_400963_-	hypothetical protein	NA	A0A2H4JFH8	uncultured_Caudovirales_phage	90.2	1.5e-21
AUU92851.1|400955_401156_-	host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	46.7	2.2e-05
AUU92852.1|401289_401481_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
AUU87958.1|401751_402531_-	hypothetical protein	NA	Q8HA02	Enterobacteria_phage	50.9	4.8e-40
AUU87959.1|402539_402824_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
AUU87960.1|403005_403947_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87961.1|404039_405266_-|integrase	site-specific integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	62.4	1.6e-151
AUU87962.1|405612_405777_+	DUF2556 domain-containing protein	NA	NA	NA	NA	NA
405440:405457	attR	TACGGCATGAACTGATAG	NA	NA	NA	NA
AUU87963.1|405918_407997_+	bifunctional diguanylate cyclase/phosphodiesterase	NA	G3MA91	Bacillus_virus	38.2	7.5e-24
AUU87964.1|408362_408584_+	hypothetical protein	NA	NA	NA	NA	NA
AUU87965.1|409060_410086_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	40.7	6.9e-71
AUU87966.1|410156_411338_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AUU87967.1|411347_412451_+	ABC transporter permease	NA	NA	NA	NA	NA
AUU87968.1|412458_413217_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.8	2.6e-19
AUU87969.1|418775_418994_+	hypothetical protein	NA	NA	NA	NA	NA
AUU87970.1|419070_419619_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
AUU87971.1|419600_419858_-	DUF1488 domain-containing protein	NA	NA	NA	NA	NA
AUU87972.1|419854_420673_-	shikimate dehydrogenase	NA	NA	NA	NA	NA
AUU87973.1|420677_421250_-	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA	NA
AUU87974.1|421239_421797_-	hypothetical protein	NA	NA	NA	NA	NA
AUU87975.1|421823_422297_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
AUU87976.1|422268_423393_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
AUU87977.1|423520_424030_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	41.1	5.1e-19
AUU87978.1|424044_424992_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	32.0	4.9e-07
>prophage 3
CP026197	Enterobacteriaceae bacterium ENNIH3 chromosome, complete genome	5904433	1330848	1373426	5904433	holin,tail,integrase,tRNA,portal,terminase	Enterobacteria_phage(34.04%)	53	1330068:1330083	1372477:1372492
1330068:1330083	attL	TTGCGCCGATGCTCGA	NA	NA	NA	NA
AUU88772.1|1330848_1331283_+	hypothetical protein	NA	A0A0S2SYH1	Pseudomonas_phage	52.4	1.1e-38
AUU88773.1|1331309_1331582_-	pyocin activator protein PrtN	NA	K7PGU0	Enterobacteria_phage	84.3	1.1e-36
AUU88774.1|1331611_1331902_-	hypothetical protein	NA	K7PKM4	Enterobacterial_phage	54.2	1.3e-19
AUU88775.1|1331901_1332165_-	hypothetical protein	NA	G8C7S3	Escherichia_phage	53.5	6.1e-16
AUU88776.1|1332168_1332396_-	hypothetical protein	NA	A0A2R2Z310	Escherichia_phage	49.2	2.1e-09
AUU88777.1|1332401_1332722_-	hypothetical protein	NA	A0A222YY67	Escherichia_phage	70.8	1.0e-36
AUU88778.1|1332718_1333213_-	hypothetical protein	NA	NA	NA	NA	NA
AUU88779.1|1333209_1334049_-	chromosome partitioning protein ParB	NA	K7PKM7	Enterobacterial_phage	74.6	3.7e-107
AUU88780.1|1334038_1334701_-	hypothetical protein	NA	NA	NA	NA	NA
AUU88781.1|1334691_1335228_-	hypothetical protein	NA	A0A192Y8M4	Salmonella_phage	77.0	8.8e-78
AUU88782.1|1335315_1336233_-	hypothetical protein	NA	A0A1W6JP69	Morganella_phage	40.5	4.1e-51
AUU88783.1|1337117_1337384_-	hypothetical protein	NA	NA	NA	NA	NA
AUU88784.1|1337584_1338466_+	NAD-dependent DNA ligase	NA	A0A0U4J8W4	Pseudomonas_phage	33.9	1.5e-18
AUU88785.1|1338457_1339144_-	helix-turn-helix transcriptional regulator	NA	A0A0N7C1P9	Escherichia_phage	42.6	1.2e-39
AUU88786.1|1339280_1339508_+	cytoplasmic chaperone TorD	NA	NA	NA	NA	NA
AUU88787.1|1339552_1340122_+	DNA-binding protein	NA	A0A1C9II13	Salmonella_phage	61.0	3.5e-56
AUU88788.1|1340304_1340496_+	DUF4222 domain-containing protein	NA	S5M7S5	Escherichia_phage	57.9	3.6e-10
AUU88789.1|1341501_1341942_+	hypothetical protein	NA	U5P0U0	Shigella_phage	34.2	4.3e-14
AUU88790.1|1341944_1342604_+	DNA methyltransferase	NA	I6PDF5	Cronobacter_phage	80.1	1.9e-98
AUU88791.1|1342600_1343086_+	hypothetical protein	NA	A0A1C9IIA0	Salmonella_phage	78.7	2.1e-54
AUU92886.1|1343097_1343976_+	hypothetical protein	NA	F1C5A3	Cronobacter_phage	47.9	4.5e-63
AUU88792.1|1344238_1345228_+	hypothetical protein	NA	A0A291AWV9	Escherichia_phage	67.5	3.1e-137
AUU88793.1|1345245_1345617_+	antitermination protein Q	NA	A5LH77	Enterobacteria_phage	70.0	1.2e-44
AUU88794.1|1345653_1346103_-	hypothetical protein	NA	A5LH78	Enterobacteria_phage	48.4	2.6e-22
AUU88795.1|1346122_1347067_-	hypothetical protein	NA	A5LH79	Enterobacteria_phage	45.5	2.0e-69
AUU88796.1|1347330_1347642_+|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	84.5	2.0e-42
AUU88797.1|1347638_1348268_+	endolysin	NA	A0A193GYJ3	Enterobacter_phage	68.1	5.7e-76
AUU88798.1|1348264_1348480_+	hypothetical protein	NA	A0A2P9HXL2	Yersinia_phage	36.6	2.2e-08
AUU88799.1|1348479_1348746_+	hypothetical protein	NA	G8C7W1	Escherichia_phage	48.9	5.1e-10
AUU88800.1|1348696_1348888_+	hypothetical protein	NA	K7PM01	Enterobacterial_phage	80.0	8.1e-18
AUU88801.1|1349011_1349785_+	hypothetical protein	NA	NA	NA	NA	NA
AUU88802.1|1350071_1350611_+|terminase	terminase	terminase	A5LH26	Enterobacteria_phage	63.2	1.9e-51
AUU88803.1|1350610_1352728_+	DNA packaging protein	NA	K7PH52	Enterobacterial_phage	77.5	0.0e+00
AUU88804.1|1352724_1352940_+	hypothetical protein	NA	A5LH28	Enterobacteria_phage	74.3	7.9e-22
AUU88805.1|1352939_1354448_+|portal	phage portal protein	portal	K7PHM5	Enterobacterial_phage	78.1	6.9e-229
AUU88806.1|1354371_1356405_+	peptidase S14	NA	K7PKX4	Enterobacterial_phage	80.6	3.7e-312
AUU88807.1|1356483_1356807_+	DUF2190 domain-containing protein	NA	Q9EYD5	Enterobacteria_phage	53.3	1.4e-22
AUU88808.1|1356799_1357075_+	ATP-binding protein	NA	K7PH55	Enterobacterial_phage	52.5	1.3e-16
AUU88809.1|1357084_1357642_+|tail	phage tail protein	tail	K7P7A8	Enterobacteria_phage	84.0	5.6e-67
AUU88810.1|1357638_1358037_+|tail	phage tail protein	tail	K7PHM6	Enterobacterial_phage	66.7	7.0e-48
AUU88811.1|1358044_1358776_+|tail	phage tail protein	tail	K7PKX6	Enterobacterial_phage	69.4	4.7e-90
AUU88812.1|1358787_1359198_+|tail	phage minor tail protein G	tail	M9NZD7	Enterobacteria_phage	42.1	6.4e-20
AUU88813.1|1359194_1359524_+|tail	phage tail assembly protein T	tail	A0A0K2FJB3	Enterobacteria_phage	48.1	3.0e-20
AUU88814.1|1359504_1362078_+|tail	phage tail tape measure protein	tail	K7PKR0	Enterobacteria_phage	38.0	1.8e-136
AUU88815.1|1362080_1362428_+|tail	phage tail protein	tail	K7PJT2	Enterobacteria_phage	60.9	1.0e-34
AUU88816.1|1362424_1363180_+|tail	phage minor tail protein L	tail	K7PGX3	Enterobacteria_phage	79.7	1.0e-119
AUU88817.1|1363181_1363892_+	peptidase P60	NA	K7PLS6	Enterobacteria_phage	83.7	7.7e-122
AUU88818.1|1364578_1365193_+|tail	phage tail protein	tail	K7PM69	Enterobacteria_phage	67.8	4.5e-70
AUU88819.1|1369403_1370579_+	hypothetical protein	NA	A0A2I6PID3	Escherichia_phage	51.1	4.5e-42
AUU88820.1|1370682_1370922_+	hypothetical protein	NA	K7P7E2	Enterobacteria_phage	55.1	6.3e-20
AUU88821.1|1370921_1371206_+	hypothetical protein	NA	K7PGV5	Enterobacterial_phage	43.3	8.1e-14
AUU88822.1|1371209_1372301_-|integrase	integrase	integrase	S5MDN5	Escherichia_phage	82.5	2.9e-176
AUU88823.1|1372388_1373426_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
1372477:1372492	attR	TTGCGCCGATGCTCGA	NA	NA	NA	NA
>prophage 4
CP026197	Enterobacteriaceae bacterium ENNIH3 chromosome, complete genome	5904433	1489121	1496245	5904433		uncultured_Caudovirales_phage(100.0%)	9	NA	NA
AUU88925.1|1489121_1489844_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	73.0	1.8e-97
AUU88926.1|1490142_1490640_-	phosphatase	NA	NA	NA	NA	NA
AUU88927.1|1490779_1491289_-	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	37.8	6.5e-22
AUU88928.1|1491361_1491790_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	70.7	1.8e-49
AUU88929.1|1491847_1493137_-	arsenical efflux pump membrane protein ArsB	NA	A0A2H4J144	uncultured_Caudovirales_phage	72.5	3.3e-171
AUU88930.1|1493177_1494944_-	arsenical pump-driving ATPase	NA	NA	NA	NA	NA
AUU88931.1|1494967_1495333_-	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA	NA
AUU88932.1|1495355_1495835_-	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	51.3	1.8e-34
AUU88933.1|1495891_1496245_-	transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	47.2	5.9e-22
>prophage 6
CP026197	Enterobacteriaceae bacterium ENNIH3 chromosome, complete genome	5904433	2982809	3030346	5904433	holin,head,tail,lysis,integrase,transposase	uncultured_Caudovirales_phage(29.79%)	62	2985547:2985606	3030498:3030599
AUU90224.1|2982809_2983469_-	transmembrane protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	54.4	3.4e-47
AUU90225.1|2983745_2985374_+	oligopeptide ABC transporter substrate-binding protein OppA	NA	NA	NA	NA	NA
2985547:2985606	attL	CCGGTCTTGAAAACCGGCGACCCGAAAGGGTTCCAGAGTTCGAATCTCTGCGCTTCCGCC	NA	NA	NA	NA
AUU90226.1|2985690_2986701_-|integrase	integrase	integrase	A0A192Y7M7	Salmonella_phage	49.8	1.8e-84
AUU90227.1|2986700_2986919_-	hypothetical protein	NA	H9C153	Pectobacterium_phage	71.0	5.2e-21
AUU90228.1|2986881_2987082_-	hypothetical protein	NA	H9C154	Pectobacterium_phage	52.3	6.1e-08
AUU90229.1|2987131_2987314_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90230.1|2987316_2987877_-	hypothetical protein	NA	H9C156	Pectobacterium_phage	59.6	6.2e-50
AUU90231.1|2987873_2990156_-	hypothetical protein	NA	H9C157	Pectobacterium_phage	34.1	1.2e-104
AUU90232.1|2990193_2990523_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90233.1|2991552_2992017_-	transcriptional regulator	NA	A0A0U2QW76	Escherichia_phage	49.0	8.8e-34
AUU90234.1|2992116_2992350_+	transcriptional regulator	NA	A0A0U2S629	Escherichia_phage	50.0	9.5e-13
AUU90235.1|2992419_2992866_+	hypothetical protein	NA	H9C162	Pectobacterium_phage	53.2	8.2e-29
AUU90236.1|2992885_2993098_+	hypothetical protein	NA	H9C163	Pectobacterium_phage	48.5	6.4e-08
AUU90237.1|2993100_2994111_+	helix-turn-helix domain-containing protein	NA	H9C164	Pectobacterium_phage	72.2	2.3e-39
AUU90238.1|2994107_2995499_+	replicative DNA helicase	NA	I6R0N4	Salmonella_phage	48.0	6.8e-106
AUU90239.1|2995540_2996239_+	hypothetical protein	NA	NA	NA	NA	NA
AUU90240.1|2996242_2996488_+	hypothetical protein	NA	NA	NA	NA	NA
AUU90241.1|2996484_2996931_+	hypothetical protein	NA	NA	NA	NA	NA
AUU92969.1|2996945_2997167_+	hypothetical protein	NA	S4TVX5	Salmonella_phage	58.5	5.7e-15
AUU90242.1|2997163_2997424_+	hypothetical protein	NA	NA	NA	NA	NA
AUU90243.1|2997420_2999283_+	DNA cytosine methyltransferase	NA	H9C171	Pectobacterium_phage	51.0	7.1e-191
AUU90244.1|3001212_3001404_+	hypothetical protein	NA	NA	NA	NA	NA
AUU90245.1|3001470_3002067_+	hypothetical protein	NA	H9C173	Pectobacterium_phage	68.7	3.1e-76
AUU90246.1|3002063_3002357_+	DUF1364 domain-containing protein	NA	A0A0U2KD41	Escherichia_phage	64.2	5.7e-31
AUU90247.1|3002353_3002659_+	hypothetical protein	NA	A0A0U2S606	Escherichia_phage	41.8	8.1e-20
AUU92970.1|3002734_3003941_+|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	62.7	2.6e-101
AUU90248.1|3003962_3004283_+	hypothetical protein	NA	NA	NA	NA	NA
AUU90249.1|3004494_3005040_+	hypothetical protein	NA	NA	NA	NA	NA
AUU90250.1|3005193_3005409_+|holin	holin	holin	Q9ZWW2	Enterobacteria_phage	78.9	5.3e-26
AUU90251.1|3005408_3005945_+	lysozyme	NA	H6WRZ4	Salmonella_phage	85.9	6.1e-87
AUU90252.1|3005941_3006400_+|lysis	lysis protein	lysis	M9NYX9	Enterobacteria_phage	58.3	1.4e-39
AUU90253.1|3006490_3006799_+	hypothetical protein	NA	NA	NA	NA	NA
AUU90254.1|3006898_3007531_+	hypothetical protein	NA	F1C5D5	Cronobacter_phage	79.8	8.2e-99
AUU90255.1|3007561_3008035_+	hypothetical protein	NA	F1C5D6	Cronobacter_phage	71.2	3.0e-53
AUU90256.1|3008271_3009885_+	TerL protein	NA	A0A0M5M1R6	Salmonella_phage	83.1	6.8e-275
AUU90257.1|3009888_3011343_+	hypothetical protein	NA	A0A0M4S6U1	Salmonella_phage	68.3	3.9e-189
AUU92971.1|3011395_3011944_+	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	52.8	7.7e-45
AUU90258.1|3011982_3012261_+	hypothetical protein	NA	NA	NA	NA	NA
AUU90259.1|3012329_3013532_+	hypothetical protein	NA	A0A0M4R5A6	Salmonella_phage	53.7	1.1e-107
AUU90260.1|3013535_3014030_+	hypothetical protein	NA	A0A2H4JHM9	uncultured_Caudovirales_phage	63.8	2.5e-50
AUU90261.1|3014041_3014983_+	DUF2184 domain-containing protein	NA	A0A2H4J191	uncultured_Caudovirales_phage	77.1	1.3e-137
AUU90262.1|3015023_3015305_+	hypothetical protein	NA	NA	NA	NA	NA
AUU90263.1|3015273_3015693_+	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	62.2	3.9e-41
AUU90264.1|3015689_3016199_+	hypothetical protein	NA	A0A2H4J488	uncultured_Caudovirales_phage	42.7	1.4e-21
AUU90265.1|3016198_3016603_+|head,tail	head-tail adaptor	head,tail	A0A2H4J1A4	uncultured_Caudovirales_phage	70.2	1.4e-43
AUU90266.1|3016595_3017144_+	hypothetical protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	52.2	4.7e-50
AUU90267.1|3017147_3018293_+	hypothetical protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	73.5	3.1e-157
AUU90268.1|3018302_3018743_+	DUF3277 domain-containing protein	NA	A0A0M5M1K6	Salmonella_phage	75.3	1.4e-57
AUU90269.1|3018746_3019190_+	hypothetical protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	56.2	3.9e-31
AUU90270.1|3019189_3019381_+	NTP pyrophosphohydrolase	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	74.5	2.4e-14
AUU92972.1|3019757_3021707_+	lytic transglycosylase	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	47.3	2.4e-149
AUU90271.1|3021706_3022276_+	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	72.4	6.7e-68
AUU90272.1|3022272_3022575_+	hypothetical protein	NA	A0A0M4R5B7	Salmonella_phage	58.0	1.7e-25
AUU90273.1|3022577_3023609_+	hypothetical protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	53.8	3.2e-100
AUU90274.1|3023605_3023956_+	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	55.2	4.5e-30
AUU90275.1|3024087_3024828_+	hypothetical protein	NA	NA	NA	NA	NA
AUU90276.1|3024808_3025204_+	hypothetical protein	NA	NA	NA	NA	NA
AUU90277.1|3025259_3026012_+	translation initiation factor IF-2	NA	A0A0M5M1K7	Salmonella_phage	69.4	1.3e-79
AUU90278.1|3026011_3026365_+	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	81.2	7.9e-51
AUU90279.1|3026365_3027565_+	hypothetical protein	NA	A0A2H4J5T1	uncultured_Caudovirales_phage	74.6	4.4e-162
AUU90280.1|3027561_3028242_+	DUF2612 domain-containing protein	NA	A0A0M5M1K4	Salmonella_phage	81.9	2.0e-111
AUU92973.1|3029917_3030346_+|tail	phage tail protein	tail	U5P083	Shigella_phage	50.7	6.7e-28
3030498:3030599	attR	CCGGTCTTGAAAACCGGCGACCCGAAAGGGTTCCAGAGTTCGAATCTCTGCGCTTCCGCCAGATTAAACAAGGGCTTACCATTTGGTAAGCCCTTTGTTTTT	NA	NA	NA	NA
>prophage 7
CP026197	Enterobacteriaceae bacterium ENNIH3 chromosome, complete genome	5904433	3390509	3425428	5904433	head,tail,plate,transposase	Pseudomonas_phage(38.71%)	48	NA	NA
AUU90606.1|3390509_3390947_-|tail	phage tail protein	tail	U5P083	Shigella_phage	49.3	7.5e-27
AUU90607.1|3392454_3393027_-|tail	phage tail protein	tail	F6MIL7	Haemophilus_phage	43.5	3.9e-39
AUU90608.1|3393023_3394085_-|tail	phage tail protein	tail	F6MIL6	Haemophilus_phage	47.0	5.4e-79
AUU90609.1|3394084_3394441_-	hypothetical protein	NA	A0A0M3LQK5	Mannheimia_phage	48.3	2.0e-22
AUU90610.1|3394503_3395085_-|plate	phage baseplate assembly protein V	plate	F6MIL4	Haemophilus_phage	55.1	4.9e-42
AUU90611.1|3395068_3396280_-|tail	phage tail protein	tail	A0A2H4J9E6	uncultured_Caudovirales_phage	37.3	3.8e-76
AUU90612.1|3396263_3397685_-	multidrug DMT transporter permease	NA	A0A2H4JGT4	uncultured_Caudovirales_phage	30.6	9.0e-45
AUU93004.1|3397684_3400222_-|tail	phage tail tape measure protein	tail	A0A0M3LPB6	Mannheimia_phage	32.2	6.3e-65
AUU90613.1|3400341_3400740_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90614.1|3400736_3401111_-|tail	phage tail protein	tail	A0A0M3LRV6	Mannheimia_phage	55.9	4.9e-27
AUU90615.1|3401122_3402541_-|tail	phage tail protein	tail	B7SDP8	Haemophilus_phage	49.0	7.2e-103
AUU93005.1|3402540_3402792_-	hypothetical protein	NA	A0A0M3LQM9	Mannheimia_phage	56.5	4.2e-06
AUU90616.1|3402781_3403438_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90617.1|3403434_3403863_-	DUF1320 domain-containing protein	NA	NA	NA	NA	NA
AUU90618.1|3404328_3405237_-|head	head protein	head	A0A2H4J778	uncultured_Caudovirales_phage	61.9	1.4e-104
AUU90619.1|3405248_3405644_-	hypothetical protein	NA	J9RWG0	Pseudomonas_phage	47.7	3.6e-20
AUU90620.1|3405636_3406725_-	hypothetical protein	NA	A0A2D1GNS3	Pseudomonas_phage	42.8	5.2e-53
AUU90621.1|3406959_3407502_-	phage virion morphogenesis protein	NA	A0A2H4J9E5	uncultured_Caudovirales_phage	40.2	8.5e-20
AUU90622.1|3407491_3408763_-|head	phage head morphogenesis protein	head	A0A0M4UTA3	Ralstonia_phage	40.7	6.5e-63
AUU90623.1|3408755_3410324_-	hypothetical protein	NA	A0A125RNC0	Pseudomonas_phage	47.0	6.5e-129
AUU90624.1|3410323_3412024_-	hypothetical protein	NA	H6V8N6	Pseudomonas_phage	62.1	1.5e-195
AUU90625.1|3412028_3412226_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90626.1|3412218_3412719_-	DNA-binding protein	NA	A0A0A1IX73	Pseudomonas_phage	54.8	3.4e-47
AUU90627.1|3412718_3413021_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90628.1|3413017_3413263_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90629.1|3413259_3413895_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90630.1|3413884_3414133_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90631.1|3414123_3414768_-	glycoside hydrolase family 19	NA	A0A2D1GNI0	Pseudomonas_phage	61.5	3.5e-65
AUU93006.1|3414847_3415195_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90632.1|3415197_3415638_-	hypothetical protein	NA	A0A2D1GNW5	Pseudomonas_phage	44.7	1.7e-26
AUU90633.1|3415582_3416059_-	regulatory protein GemA	NA	A0A2D1GNN4	Pseudomonas_phage	60.6	1.5e-41
AUU90634.1|3416118_3416334_-	hypothetical protein	NA	A0A2D1GNS9	Pseudomonas_phage	68.6	3.9e-21
AUU93007.1|3417021_3417210_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90635.1|3417209_3417425_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90636.1|3417417_3417780_-	hypothetical protein	NA	A0A0K1LK36	Vibrio_phage	56.7	3.5e-22
AUU90637.1|3417776_3417977_-	hypothetical protein	NA	NA	NA	NA	NA
AUU93008.1|3417973_3418276_-	hypothetical protein	NA	I3UM56	Rhodobacter_phage	46.6	9.5e-13
AUU90638.1|3418497_3419217_-	hypothetical protein	NA	A0A0S4L2R2	Pseudomonas_phage	30.5	1.4e-14
AUU90639.1|3419227_3419443_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90640.1|3419521_3419713_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90641.1|3419693_3419936_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90642.1|3419937_3420597_-	sulfate transporter	NA	A4JWM8	Burkholderia_virus	67.5	8.9e-72
AUU90643.1|3420586_3420784_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90644.1|3421015_3421306_-	hypothetical protein	NA	NA	NA	NA	NA
AUU90645.1|3421316_3422210_-	ATPase	NA	A0A2D1GNS0	Pseudomonas_phage	59.7	1.8e-96
AUU90646.1|3422217_3424266_-|transposase	transposase	transposase	A0A2D1GNK9	Pseudomonas_phage	48.3	1.1e-173
AUU90647.1|3424265_3424523_-	transcriptional regulator	NA	M1PVU4	Vibrio_phage	64.6	2.1e-16
AUU90648.1|3424657_3425428_+	phage repressor protein C	NA	A0A2I7S9A5	Vibrio_phage	37.1	3.0e-39
>prophage 8
CP026197	Enterobacteriaceae bacterium ENNIH3 chromosome, complete genome	5904433	4338702	4353085	5904433	tRNA	Pandoravirus(11.11%)	16	NA	NA
AUU93051.1|4338702_4339749_+	3-deoxy-7-phosphoheptulonate synthase	NA	A0A0B5IW14	Pandoravirus	45.9	7.5e-81
AUU91443.1|4339884_4340076_+	hemin uptake protein HemP	NA	NA	NA	NA	NA
AUU91444.1|4340080_4341523_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	37.0	5.5e-58
AUU91445.1|4341584_4342295_-	EAL domain-containing protein	NA	NA	NA	NA	NA
AUU91446.1|4342619_4343081_-	endopeptidase	NA	A0A217EQL1	Bacillus_phage	35.3	2.9e-13
AUU91447.1|4343157_4343907_-	vitamin B12 ABC transporter ATP-binding protein BtuD	NA	A0A2R8FG22	Brazilian_cedratvirus	31.9	1.6e-08
AUU91448.1|4343903_4344455_-	glutathione peroxidase	NA	NA	NA	NA	NA
AUU91449.1|4344674_4345655_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA	NA
AUU91450.1|4345754_4346054_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	7.2e-13
AUU91451.1|4346058_4348446_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	25.0	4.7e-06
AUU91452.1|4348460_4349444_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	43.2	3.8e-34
AUU93052.1|4349569_4349614_-|tRNA	phenylalanyl--tRNA ligase operon leader peptide	tRNA	NA	NA	NA	NA
AUU91453.1|4349860_4350217_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AUU91454.1|4350316_4350514_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AUU91455.1|4350610_4351153_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	32.9	2.2e-15
AUU91456.1|4351156_4353085_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.9	6.7e-128
>prophage 9
CP026197	Enterobacteriaceae bacterium ENNIH3 chromosome, complete genome	5904433	4778353	4784693	5904433		Enterobacteria_phage(66.67%)	6	NA	NA
AUU91858.1|4778353_4778902_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	59.9	3.9e-49
AUU91859.1|4778906_4779797_-	dTDP-4-dehydrorhamnose reductase	NA	A0A140G5S3	Enterobacteria_phage	34.7	9.9e-26
AUU91860.1|4779821_4780694_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	67.7	6.4e-110
AUU91861.1|4780712_4781801_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	52.0	3.8e-96
AUU91862.1|4782210_4783104_-	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	39.9	2.8e-44
AUU91863.1|4783286_4784693_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	31.8	1.3e-19
>prophage 10
CP026197	Enterobacteriaceae bacterium ENNIH3 chromosome, complete genome	5904433	5033313	5123246	5904433	head,terminase,protease,tail,lysis,integrase,tRNA,transposase,portal,capsid	Enterobacteria_phage(21.15%)	91	5038555:5038614	5111333:5112668
AUU92069.1|5033313_5034126_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AUU92070.1|5034125_5035139_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AUU92071.1|5035202_5036339_-	4-phosphoerythronate dehydrogenase PdxB	NA	A0A1M7XU89	Cedratvirus	28.6	3.0e-19
AUU92072.1|5036452_5037460_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA	NA
5038555:5038614	attL	TGATGTAGCCCCCTGAAACACCAGACAGTAGCTGTATCTCCAGATAAGAGATAGGCTTGA	NA	NA	NA	NA
AUU93083.1|5038645_5039852_+|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	62.7	2.6e-101
AUU92073.1|5040522_5041704_-	MFS transporter	NA	NA	NA	NA	NA
AUU92074.1|5041922_5043137_-	beta-ketoacyl-[acyl-carrier-protein] synthase I	NA	NA	NA	NA	NA
AUU92075.1|5043236_5045297_+|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	tRNA	NA	NA	NA	NA
AUU92076.1|5045528_5045807_-	YfcL family protein	NA	NA	NA	NA	NA
AUU92077.1|5045820_5046369_-	elongation factor P hydroxylase	NA	NA	NA	NA	NA
AUU92078.1|5046365_5047178_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92079.1|5047177_5047999_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA	NA
AUU92080.1|5048002_5049088_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	48.0	1.1e-90
AUU92081.1|5049123_5050056_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AUU92082.1|5050219_5050771_+	endonuclease SmrB	NA	NA	NA	NA	NA
AUU92083.1|5050836_5051322_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA	NA
AUU92084.1|5051531_5053679_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA	NA
AUU92085.1|5053678_5054989_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA	NA
AUU92086.1|5055151_5055436_-	DUF406 domain-containing protein	NA	NA	NA	NA	NA
AUU92087.1|5055537_5055771_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92088.1|5055800_5057135_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA	NA
AUU92089.1|5057183_5057936_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA	NA
AUU92090.1|5058251_5059178_+	hypothetical protein	NA	E7DYY8	Enterobacteria_phage	84.7	1.8e-139
AUU92091.1|5059590_5060358_+	hypothetical protein	NA	NA	NA	NA	NA
AUU92092.1|5060347_5060752_+	hypothetical protein	NA	NA	NA	NA	NA
AUU92093.1|5060846_5061131_-	hypothetical protein	NA	K7PGV5	Enterobacterial_phage	39.1	2.6e-12
AUU92094.1|5061130_5061370_-	hypothetical protein	NA	K7P7N3	Enterobacteria_phage	60.3	9.8e-21
AUU92095.1|5061473_5062649_-	hypothetical protein	NA	A0A220NRP2	Escherichia_phage	57.4	3.7e-44
AUU92096.1|5062698_5063652_-	hypothetical protein	NA	I6PBN9	Cronobacter_phage	39.8	2.8e-50
AUU92097.1|5063651_5067434_-	host specificity protein	NA	Q9MCU0	Escherichia_phage	71.6	0.0e+00
AUU92098.1|5067485_5068100_-|tail	phage tail protein	tail	K7PHE5	Enterobacteria_phage	69.6	1.4e-71
AUU92099.1|5068150_5068828_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92100.1|5068860_5069571_-	peptidase P60	NA	K7PGR2	Enterobacteria_phage	83.9	4.8e-124
AUU92101.1|5069572_5070328_-|tail	phage minor tail protein L	tail	K7PKU0	Enterobacteria_phage	79.7	1.5e-120
AUU92102.1|5070324_5070663_-|tail	phage tail protein	tail	K7PKL8	Enterobacterial_phage	75.9	3.9e-47
AUU92103.1|5070662_5074211_-|tail	phage tail tape measure protein	tail	K7P7L6	Enterobacteria_phage	44.5	5.3e-203
AUU92104.1|5074246_5074504_-|tail	phage tail protein	tail	K7PLY6	Enterobacterial_phage	71.3	1.2e-27
AUU92105.1|5074515_5074911_-|tail	phage tail protein	tail	A0A220NRP3	Escherichia_phage	59.5	1.4e-32
AUU92106.1|5074954_5075431_-|tail	phage tail protein	tail	A0A220NRQ0	Escherichia_phage	82.1	2.6e-65
AUU92107.1|5075488_5075836_-	hypothetical protein	NA	K7PM93	Enterobacterial_phage	48.7	1.5e-22
AUU92108.1|5075832_5076279_-	hypothetical protein	NA	F1C579	Cronobacter_phage	68.5	1.0e-50
AUU92109.1|5076275_5076617_-|head,tail	head-tail adaptor	head,tail	F1C580	Cronobacter_phage	58.6	7.4e-30
AUU93084.1|5076616_5076934_-	hypothetical protein	NA	Q77W99	Escherichia_phage	63.0	1.1e-32
AUU92110.1|5076969_5078130_-|capsid	phage major capsid protein	capsid	F1C582	Cronobacter_phage	86.7	2.7e-188
AUU92111.1|5078132_5078813_-|head,protease	HK97 family phage prohead protease	head,protease	Q9MCV5	Escherichia_phage	80.1	8.5e-102
AUU92112.1|5078829_5080104_-|portal	phage portal protein	portal	F1C584	Cronobacter_phage	84.9	1.1e-216
AUU92113.1|5080103_5081840_-|terminase	phage terminase small subunit P27 family	terminase	A0A0U2C138	Paracoccus_phage	46.7	3.9e-143
AUU92114.1|5081793_5082261_-|terminase	phage terminase small subunit P27 family	terminase	Q9B019	Phage_GMSE-1	58.4	1.6e-43
AUU92115.1|5082459_5082822_-	HNH endonuclease	NA	F1C587	Cronobacter_phage	73.0	3.3e-44
AUU92116.1|5082818_5083409_-	hypothetical protein	NA	S4TR53	Salmonella_phage	69.2	9.1e-76
AUU92117.1|5083390_5084848_-	glycosyltransferase	NA	K7PKP3	Enterobacterial_phage	81.9	2.7e-246
AUU92118.1|5084850_5085465_-	hypothetical protein	NA	M9NZE9	Enterobacteria_phage	47.8	1.3e-21
AUU92119.1|5085629_5085872_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92120.1|5086135_5086588_-|lysis	lysis protein	lysis	A0A2H4JHL8	uncultured_Caudovirales_phage	49.0	2.4e-28
AUU92121.1|5086584_5087121_-	lysozyme	NA	H6WRZ4	Salmonella_phage	87.6	6.5e-89
AUU92122.1|5087123_5087378_-|lysis	lysis protein	lysis	NA	NA	NA	NA
AUU92123.1|5087587_5087851_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92124.1|5087952_5088366_-	antitermination protein	NA	Q8W638	Enterobacteria_phage	50.8	1.7e-28
AUU92125.1|5088435_5088744_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92126.1|5088746_5090618_-	bifunctional DNA primase/helicase	NA	I6S1U6	Salmonella_phage	59.0	4.9e-224
AUU92127.1|5090721_5091750_-	hypothetical protein	NA	V5URT9	Shigella_phage	57.1	9.7e-49
AUU92128.1|5091750_5091951_-	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
AUU92129.1|5091952_5092168_-	XRE family transcriptional regulator	NA	A0A0N7C2U7	Escherichia_phage	47.7	4.4e-12
AUU92130.1|5092280_5092946_+	phage repressor	NA	C6ZR47	Salmonella_phage	57.0	3.4e-71
AUU92131.1|5093147_5093363_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93085.1|5094007_5094193_+	hypothetical protein	NA	NA	NA	NA	NA
AUU92132.1|5094179_5094533_+	hypothetical protein	NA	NA	NA	NA	NA
AUU92133.1|5094522_5094756_+	hypothetical protein	NA	A0A286SGR4	Klebsiella_phage	53.0	5.2e-11
AUU92134.1|5094986_5095400_+	hypothetical protein	NA	A0A286S1S2	Klebsiella_phage	70.6	2.5e-48
AUU92135.1|5095399_5095681_+	hypothetical protein	NA	NA	NA	NA	NA
AUU92136.1|5095677_5096430_+	hypothetical protein	NA	A0A1B5FPC0	Escherichia_phage	76.1	1.0e-100
AUU92137.1|5096429_5096771_+	hypothetical protein	NA	A0A1B5FPL8	Escherichia_phage	70.8	6.4e-42
AUU92138.1|5096771_5096996_+	hypothetical protein	NA	A0A286S2B3	Klebsiella_phage	50.0	5.0e-11
AUU92139.1|5096992_5097229_+	hypothetical protein	NA	A0A286S2B6	Klebsiella_phage	52.6	1.5e-13
AUU92140.1|5098215_5098398_+	hypothetical protein	NA	G3CFG7	Escherichia_phage	71.7	6.9e-19
AUU92141.1|5098381_5099596_-|integrase	integrase	integrase	E7DYQ7	Enterobacteria_phage	80.4	9.9e-202
AUU92142.1|5099996_5101196_+|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	59.6	3.3e-133
AUU92143.1|5101414_5102582_+|transposase	IS3-like element ISEc52 family transposase	transposase	Q716C2	Shigella_phage	96.1	3.6e-177
AUU92144.1|5103049_5104132_+	lac repressor	NA	C6ZCU4	Enterobacteria_phage	98.1	6.5e-189
AUU92145.1|5104253_5107328_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	96.7	0.0e+00
AUU92146.1|5107379_5108633_+	MFS transporter	NA	NA	NA	NA	NA
AUU92147.1|5108689_5108860_+	galactoside O-acetyltransferase	NA	NA	NA	NA	NA
AUU92148.1|5109768_5110998_+	HDOD domain-containing protein	NA	NA	NA	NA	NA
AUU93086.1|5111423_5112630_+|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	62.7	2.6e-101
AUU93087.1|5114313_5114595_+	DNA-binding protein	NA	NA	NA	NA	NA
5111333:5112668	attR	TGATGTAGCCCCCTGAAACACCAGACAGTAGCTGTATCTCCAGATAAGAGATAGGCTTGAATATATGTCTAACACTAACACCAATTTTGAGATGACCGGGATCCTGTTAGGGCAAGAAGTCCGTAAACGTAAAACTCCTCAGGAGAAGATCGCCATTATCCAGCAGACGATGGAGCCGGGTATGAATGTCTCCCATGTCGCCCGCCTGCATGGTATCCAGCCCAGCCTGCTGTTTAAGTGGAAGAAGCAATATCAGGAAGGCAGCCTCACCGCCGTTGCGGCTGGAGAGGAAGTCGTTCCTGCTTCTGAGCTTACTGCTGCTCTGAAGCAGGTCCGGGAGCTTCAGCGCCTTCTGGGCAAGAAGACGATGGAAGTTGAGATCCTGAAAGAAGCCGTGGAGTACGGTCAGTCGCGAAAATGGATAGCGCACGCGCCCTTGTTGCCAAAGGACGGGGAATAGCCATGGTCAGCCGGACCATGGGCGTGTCGCGTGCGCAACTGTCACTGCGGATTAACCGTTCTGCCGACTGGCAGGACAGGCGCTGTAACCGGCGTAATGAAGAAGCAGACGCAGAAATACTGTCGGCTATCCTCAACATTATCAGCGATATGCCGAGTTATGGTTATCGACGCGTGTGGGGCATCCTGCGCAAGCAACGTCGCACAGAGGGACAGCCACCTGTGAATGCCAAACGGCTTTACAGGATAATGAGCGAGCATAACCTGTTGTTGTTGCATCACAAACCAGAGCGACCGAAGCGTGAACATAAGGGCAAGATAGCGGTGGCAGAAAGCGATATGCGCTGGTGTTCAGATGGCTTCGAGTTCGGCTGCGACAACGGCGAAAAACTGCGGGTAACGTTCGCGCTGGACTGCTGCGACCGTGAGGCCATAGACTGGGCAGCAAGCACGGGAGGCTATGACAGTTCGACCGTGCAGGATGTGATGCTGAGGTCGGTGGAAAAGCGCTTCGGCGACAGGCTGCCCGACACAGCGGTGCAGTGGCTGACGGACAACGGTTCAGCATATACCGCGCATGAAACGCGGAGGTTCGCCAAAGAGCTGAATCTGGAGCCATGTACAACAGCGGTGAGCAGCCCGCAGAGCAATGGCATGGCCGAACGGTTCGTGAAGACGATGAAGGAAGACTATATCGCGTTCATGCCGAAACCGGATGTGAGAACAGCCCTGCGAAACCTTGCAGCGGCGTTCACGCATTACAATGAAAATCACCCGCATAGTGCGCTGGGATATCACTCTCCGAGAGAATACCGGCGGCAGCGGGCATCGTTAACTTAAGATACAAAAGCTGTCCGGAAATGGCGGGTCAAGATCA	NA	NA	NA	NA
AUU92149.1|5114629_5115199_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
AUU92150.1|5115304_5118100_+|protease	Clp protease ClpC	protease	K4FB40	Cronobacter_phage	41.0	5.2e-129
AUU92151.1|5118099_5118297_+	hypothetical protein	NA	NA	NA	NA	NA
AUU92152.1|5118534_5119284_+	diguanylate cyclase	NA	NA	NA	NA	NA
AUU92153.1|5119270_5120233_+|protease	Zn-dependent protease	protease	NA	NA	NA	NA
AUU92154.1|5122125_5123246_-|transposase	IS3-like element ISSen4 family transposase	transposase	S5WIU1	Leptospira_phage	42.8	1.7e-51
>prophage 11
CP026197	Enterobacteriaceae bacterium ENNIH3 chromosome, complete genome	5904433	5334968	5420606	5904433	head,holin,tail,integrase,tRNA,terminase	Salmonella_phage(20.0%)	103	5363432:5363446	5421280:5421294
AUU92322.1|5334968_5335703_-|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	tRNA	NA	NA	NA	NA
AUU92323.1|5335820_5336624_+	inositol-1-monophosphatase	NA	NA	NA	NA	NA
AUU92324.1|5336676_5337657_-	nickel transporter	NA	NA	NA	NA	NA
AUU92325.1|5337647_5338286_-	DUF1007 domain-containing protein	NA	NA	NA	NA	NA
AUU92326.1|5338410_5339688_+	PRD domain-containing protein	NA	NA	NA	NA	NA
AUU92327.1|5339684_5340824_-	3-phenylpropionate MFS transporter	NA	NA	NA	NA	NA
AUU93099.1|5340922_5341195_-	transcriptional repressor RcnR	NA	NA	NA	NA	NA
AUU92328.1|5341337_5342231_+	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA	NA
AUU92329.1|5342281_5343535_-	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	53.1	1.9e-99
AUU92330.1|5343853_5345044_+	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
AUU92331.1|5345087_5345426_-	nitrogen regulatory protein P-II	NA	NA	NA	NA	NA
AUU92332.1|5345500_5346838_-	two-component system response regulator GlrR	NA	W8CYM9	Bacillus_phage	37.3	2.0e-09
AUU92333.1|5346834_5347569_-	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA	NA
AUU92334.1|5347565_5349002_-	two component system sensor histidine kinase QseE/GlrK	NA	W8CYF6	Bacillus_phage	23.7	1.1e-10
AUU92335.1|5349508_5351209_-	RNA-directed DNA polymerase	NA	NA	NA	NA	NA
AUU92336.1|5351527_5353150_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92337.1|5353139_5356154_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92338.1|5356278_5360166_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	57.3	4.0e-127
AUU92339.1|5360422_5361982_+	membrane-bound lytic murein transglycosylase MltF	NA	NA	NA	NA	NA
AUU92340.1|5361974_5362478_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
AUU92341.1|5362540_5363176_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA	NA
AUU92342.1|5363179_5364538_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
5363432:5363446	attL	TTCGCCAATCCCCAG	NA	NA	NA	NA
AUU92343.1|5364548_5365442_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA	NA
AUU92344.1|5365559_5366408_+	SIS domain-containing protein	NA	NA	NA	NA	NA
AUU93100.1|5366466_5366727_+	4Fe-4S dicluster domain-containing protein	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	52.3	6.5e-18
AUU92345.1|5366862_5367243_-	holo-ACP synthase	NA	NA	NA	NA	NA
AUU92346.1|5367242_5367974_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
AUU93101.1|5368074_5368782_-	DNA repair protein RecO	NA	NA	NA	NA	NA
AUU92347.1|5368914_5369826_-	GTPase Era	NA	NA	NA	NA	NA
AUU93102.1|5369822_5370503_-	ribonuclease III	NA	A0A2P0VNZ5	Tetraselmis_virus	39.0	9.6e-21
AUU92348.1|5370770_5371745_-	signal peptidase I	NA	NA	NA	NA	NA
AUU92349.1|5371761_5373561_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	26.5	3.2e-23
AUU92350.1|5373715_5374003_-	hypothetical protein	NA	K7PGV5	Enterobacterial_phage	43.5	3.1e-13
AUU92351.1|5374026_5375292_-	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	86.7	1.3e-217
AUU92352.1|5375303_5375723_-	DNA polymerase V subunit UmuD	NA	A0A1W6JNS2	Morganella_phage	60.6	2.9e-36
AUU92353.1|5375916_5377077_-	hypothetical protein	NA	A0A2I6PID3	Escherichia_phage	52.2	2.0e-42
AUU92354.1|5377141_5381221_-	hypothetical protein	NA	Q5G8W0	Enterobacteria_phage	81.6	0.0e+00
AUU92355.1|5381233_5381761_-|tail	phage tail protein	tail	H6WRW3	Salmonella_phage	60.9	3.2e-48
AUU92356.1|5381703_5382423_-|tail	phage tail protein	tail	A0A1V0E5M9	Salmonella_phage	73.4	5.4e-107
AUU92357.1|5382422_5383130_-|tail	phage minor tail protein L	tail	A0A1V0E5N2	Salmonella_phage	85.1	1.1e-117
AUU92358.1|5383166_5383520_-|tail	phage tail protein	tail	A0A1V0E5N3	Salmonella_phage	82.9	1.1e-49
AUU92359.1|5383576_5383798_-	hypothetical protein	NA	NA	NA	NA	NA
AUU93103.1|5383832_5386187_-|tail	tail protein (tape measure)	tail	Q5G8W8	Enterobacteria_phage	50.8	2.0e-121
AUU92360.1|5386448_5386922_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92361.1|5387014_5387542_-	hypothetical protein	NA	B8K1H1	Salmonella_phage	86.9	1.3e-81
AUU92362.1|5387746_5388424_-	hypothetical protein	NA	F1C5E8	Cronobacter_phage	52.3	3.5e-55
AUU92363.1|5388481_5389225_-	DNA breaking-rejoining protein	NA	F1C5E5	Cronobacter_phage	85.0	4.5e-72
AUU92364.1|5389288_5389672_-	hypothetical protein	NA	F1C5E4	Cronobacter_phage	66.1	2.3e-43
AUU92365.1|5389668_5390109_-	hypothetical protein	NA	A0A291AXD9	Shigella_phage	52.1	8.4e-34
AUU92366.1|5390110_5390467_-	hypothetical protein	NA	G0ZNE2	Cronobacter_phage	63.2	3.6e-35
AUU92367.1|5390470_5390641_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
AUU92368.1|5390637_5391021_-	hypothetical protein	NA	A0A0M3LQS8	Mannheimia_phage	42.1	1.9e-18
AUU92369.1|5391023_5391248_-	hypothetical protein	NA	A0A0M3LR32	Mannheimia_phage	73.3	5.4e-13
AUU92370.1|5391287_5392319_-	encapsulating for peroxidase	NA	A0A0M3LQZ1	Mannheimia_phage	52.6	5.2e-95
AUU92371.1|5392330_5392765_-	hypothetical protein	NA	A0A0M3LPQ2	Mannheimia_phage	46.4	6.3e-26
AUU92372.1|5392764_5394150_-	DUF2213 domain-containing protein	NA	F1C5D9	Cronobacter_phage	56.1	8.5e-141
AUU92373.1|5394161_5394344_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92374.1|5394404_5395097_-	HNH endonuclease	NA	S5M802	Pseudoalteromonas_phage	38.7	8.8e-38
AUU93104.1|5395198_5396194_-|head	phage head morphogenesis protein	head	F1C5D8	Cronobacter_phage	66.0	2.1e-109
AUU92375.1|5396129_5397581_-	DUF1073 domain-containing protein	NA	F1C5D7	Cronobacter_phage	53.4	4.2e-122
AUU92376.1|5397593_5399162_-|terminase	terminase	terminase	G8C7P3	Escherichia_phage	88.1	5.4e-293
AUU92377.1|5399158_5399647_-	hypothetical protein	NA	H9C190	Pectobacterium_phage	79.5	1.7e-51
AUU92378.1|5399677_5400325_-	hypothetical protein	NA	I6S676	Salmonella_phage	76.9	9.2e-98
AUU92379.1|5400446_5400707_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92380.1|5400703_5401234_-	hypothetical protein	NA	K7P6W1	Enterobacteria_phage	55.8	5.7e-29
AUU92381.1|5401233_5401746_-	glycoside hydrolase	NA	I6PBN2	Cronobacter_phage	59.1	3.8e-46
AUU92382.1|5401745_5401961_-|holin	holin	holin	Q9ZWW2	Enterobacteria_phage	80.3	2.4e-26
AUU92383.1|5402494_5403184_-	antiterminator	NA	I6PDF8	Cronobacter_phage	46.3	3.7e-52
AUU92384.1|5403299_5403896_-	protein NinG	NA	A0A1P8DTE0	Proteus_phage	66.1	2.8e-56
AUU92385.1|5403888_5404059_-	hypothetical protein	NA	G8C7V4	Escherichia_phage	69.6	4.3e-15
AUU92386.1|5404051_5404501_-	recombination protein NinB	NA	Q8VNP6	Enterobacteria_phage	51.7	5.2e-39
AUU92387.1|5404878_5405088_-	hypothetical protein	NA	K7P6F8	Enterobacteria_phage	63.1	2.4e-15
AUU92388.1|5405835_5406069_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92389.1|5406041_5406500_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92390.1|5406492_5406837_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92391.1|5406833_5407037_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92392.1|5407033_5407810_-	hypothetical protein	NA	F1C5B6	Cronobacter_phage	51.7	1.2e-06
AUU92393.1|5407806_5408088_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92394.1|5408087_5408804_-	Replication protein P	NA	A0A0M3ULE2	Salmonella_phage	63.1	1.8e-78
AUU92395.1|5408787_5409663_-	hypothetical protein	NA	G8C7U5	Escherichia_phage	76.9	1.9e-122
AUU92396.1|5409662_5409950_-	hypothetical protein	NA	NA	NA	NA	NA
AUU92397.1|5410007_5410340_-	hypothetical protein	NA	A0A088F856	Sulfitobacter_phage	48.2	5.7e-11
AUU92398.1|5410460_5410781_-	hypothetical protein	NA	A0A0M4RU01	Salmonella_phage	65.1	6.1e-34
AUU92399.1|5410827_5411049_-	transcriptional regulator	NA	A0A2H4FNF3	Salmonella_phage	67.1	6.9e-21
AUU93105.1|5411153_5411864_+	phage repressor protein C	NA	M9NZE3	Enterobacteria_phage	68.1	1.3e-84
AUU92400.1|5411938_5412520_+	hypothetical protein	NA	NA	NA	NA	NA
AUU92401.1|5412530_5412737_-	hypothetical protein	NA	K7P7I0	Enterobacteria_phage	94.1	1.3e-29
AUU92402.1|5413021_5413219_+	hypothetical protein	NA	NA	NA	NA	NA
AUU92403.1|5413218_5413416_+	DUF1482 domain-containing protein	NA	NA	NA	NA	NA
AUU92404.1|5413497_5413893_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93106.1|5414086_5414446_+	HNH endonuclease	NA	Q6WYF0	Enterobacteria_phage	50.0	2.4e-23
AUU92405.1|5414449_5415112_+	exodeoxyribonuclease X	NA	A0A1W5PTR6	Pseudoalteromonas_phage	36.0	1.4e-21
AUU92406.1|5415113_5415782_+	ATP-binding protein	NA	G9L667	Escherichia_phage	45.2	3.7e-49
AUU92407.1|5415792_5416473_+	hypothetical protein	NA	A0A088C400	Shewanella_sp._phage	43.5	1.9e-29
AUU92408.1|5416456_5416639_+	hypothetical protein	NA	NA	NA	NA	NA
AUU92409.1|5416631_5417186_+	phage N-6-adenine-methyltransferase	NA	E5AGF8	Erwinia_phage	59.4	5.2e-57
AUU92410.1|5417182_5417404_+	hypothetical protein	NA	NA	NA	NA	NA
AUU92411.1|5417400_5417616_+	hypothetical protein	NA	NA	NA	NA	NA
AUU92412.1|5417615_5418323_+	hypothetical protein	NA	H2BDG4	Pseudomonas_virus	46.4	1.2e-45
AUU92413.1|5418396_5418729_+	hypothetical protein	NA	M1FQT7	Enterobacteria_phage	57.1	3.5e-16
AUU92414.1|5418725_5419076_+	hypothetical protein	NA	I3PV00	Vibrio_phage	53.6	9.6e-25
AUU93107.1|5419111_5419399_+	excisionase	NA	H6WRW8	Salmonella_phage	72.6	3.0e-32
AUU92415.1|5419376_5420606_-|integrase	integrase	integrase	H6WRW7	Salmonella_phage	92.2	1.6e-231
5421280:5421294	attR	TTCGCCAATCCCCAG	NA	NA	NA	NA
>prophage 1
CP026198	Enterobacteriaceae bacterium ENNIH3 plasmid pKPC-c606, complete sequence	174695	10940	129868	174695	integrase,transposase	Escherichia_phage(20.51%)	121	47067:47080	134468:135814
AUU93146.1|10940_11729_+|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	84.3	7.4e-49
AUU93147.1|11747_13082_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93148.1|13148_13859_-	RepB family plasmid replication initiator protein	NA	I3WF20	Macacine_betaherpesvirus	31.8	3.9e-25
AUU93300.1|14731_15937_+	ParA family protein	NA	A0A077SL49	Escherichia_phage	68.1	4.5e-162
AUU93149.1|15936_16902_+	chromosome partitioning protein ParB	NA	A0A1B0V750	Salmonella_phage	51.1	6.9e-81
AUU93150.1|17122_18397_-	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.3	1.9e-150
AUU93151.1|18396_18825_-	peptidase	NA	A0A1W6JNS2	Morganella_phage	52.4	4.6e-29
AUU93152.1|19238_19496_-	hypothetical protein	NA	NA	NA	NA	NA
AUU93153.1|19908_20865_+	recombinase	NA	A0A222YXF2	Escherichia_phage	56.6	1.4e-97
AUU93301.1|20869_21268_+	plasmid stability protein	NA	NA	NA	NA	NA
AUU93154.1|21268_21517_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93155.1|21888_22161_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93156.1|22160_22982_+	N-6 DNA methylase	NA	H7BVT3	unidentified_phage	34.5	2.4e-10
AUU93157.1|23287_23506_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93158.1|23818_24511_+	DNA methylase	NA	A0A2K9VH43	Faecalibacterium_phage	37.7	2.6e-29
AUU93159.1|24507_24729_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93160.1|24667_25201_+	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
AUU93161.1|25612_26044_+	antirestriction protein	NA	NA	NA	NA	NA
AUU93162.1|26088_26289_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93163.1|26397_26808_+	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
AUU93302.1|27554_27812_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93164.1|28044_30069_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93165.1|30113_30542_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
AUU93166.1|30538_31270_+	protein PsiA	NA	NA	NA	NA	NA
AUU93167.1|31274_31592_+	theronine dehydrogenase	NA	NA	NA	NA	NA
AUU93168.1|31831_31990_+	Hok/Gef family protein	NA	NA	NA	NA	NA
AUU93303.1|32193_32451_-	DUF2767 domain-containing protein	NA	NA	NA	NA	NA
AUU93169.1|33016_33595_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93170.1|33666_33969_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93171.1|34746_35049_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93172.1|35059_35881_+	DUF945 domain-containing protein	NA	A0A2C9CYF8	Yersinia_phage	38.5	9.8e-44
AUU93304.1|35897_36443_-	lytic transglycosylase	NA	NA	NA	NA	NA
AUU93173.1|37490_38126_-	DNA-binding protein	NA	NA	NA	NA	NA
AUU93174.1|38675_38978_+	type IV conjugative transfer system protein TraL	NA	NA	NA	NA	NA
AUU93175.1|38982_39249_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93176.1|41415_41574_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93177.1|41649_41922_+	plasmid replication protein	NA	NA	NA	NA	NA
AUU93178.1|41918_42131_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93179.1|42127_42511_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93180.1|42981_43215_-	hypothetical protein	NA	NA	NA	NA	NA
AUU93181.1|43705_44074_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93182.1|45161_46559_+	hypothetical protein	NA	NA	NA	NA	NA
47067:47080	attL	CCGGGCCAGATCCC	NA	NA	NA	NA
AUU93183.1|49663_50632_+|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	27.9	3.0e-15
47067:47080	attL	CCGGGCCAGATCCC	NA	NA	NA	NA
AUU93184.1|51891_52974_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93305.1|52976_53840_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93185.1|53856_54846_-|integrase	integrase	integrase	A0A1P8DJ76	Virus_Rctr85	39.7	9.3e-49
AUU93186.1|56762_57116_+	transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	50.0	4.1e-23
AUU93187.1|57163_57526_+	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA	NA
AUU93188.1|57543_59295_+	arsenical pump-driving ATPase	NA	NA	NA	NA	NA
AUU93189.1|59343_60633_+	arsenical efflux pump membrane protein ArsB	NA	A0A2H4J144	uncultured_Caudovirales_phage	73.5	2.5e-171
AUU93190.1|60910_62078_+|transposase	IS3-like element ISEc52 family transposase	transposase	Q716C2	Shigella_phage	96.1	3.6e-177
AUU93306.1|62101_62323_+	arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	65.3	5.3e-21
AUU93191.1|62353_62758_-	arsenical pump-driving ATPase	NA	NA	NA	NA	NA
AUU93192.1|62766_63339_-	recombinase	NA	Q1MVP4	Enterobacteria_phage	89.0	2.0e-83
AUU93193.1|64453_66169_-|integrase	integrase	integrase	NA	NA	NA	NA
AUU93194.1|66278_69308_+|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
AUU93195.1|69414_70440_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	50.3	1.4e-87
69810:69823	attR	CCGGGCCAGATCCC	NA	NA	NA	NA
AUU93196.1|70436_71216_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	61.8	2.5e-89
69810:69823	attR	CCGGGCCAGATCCC	NA	NA	NA	NA
AUU93197.1|71602_72484_+	carbapenem-hydrolyzing class A beta-lactamase KPC-2	NA	A0A1B0VBP7	Salmonella_phage	52.2	2.2e-73
AUU93198.1|72733_74053_-|transposase	IS1182 family transposase ISKpn6	transposase	Q9MBP7	Staphylococcus_prophage	24.2	1.9e-12
AUU93199.1|78070_78604_-	phospholipase D family protein	NA	A0A1B2LRT6	Wolbachia_phage	33.9	5.8e-21
AUU93200.1|78603_79599_-	conjugal transfer protein TraG	NA	NA	NA	NA	NA
AUU93201.1|79640_80801_-	conjugal transfer protein TraF	NA	NA	NA	NA	NA
AUU93307.1|80800_81622_-	conjugal transfer protein TraO	NA	NA	NA	NA	NA
AUU93202.1|81695_82394_-	type IV secretion system protein VirB8	NA	NA	NA	NA	NA
AUU93203.1|82383_82530_-	conjugal transfer protein TraN	NA	NA	NA	NA	NA
AUU93204.1|83596_84601_+|transposase	IS110-like element IS4321 family transposase	transposase	NA	NA	NA	NA
AUU93205.1|85393_85609_-	hypothetical protein	NA	NA	NA	NA	NA
AUU93206.1|85527_86364_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA	NA
AUU93207.1|86363_87167_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA	NA
AUU93208.1|87227_88043_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	A0A0B5J4J5	Pandoravirus	27.6	5.9e-09
AUU93209.1|88372_88549_+	DUF4102 domain-containing protein	NA	T1S9J3	Salmonella_phage	68.6	1.0e-06
AUU93210.1|88730_89735_-|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
AUU93211.1|91631_92336_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUU93212.1|92908_93274_-	FipA	NA	NA	NA	NA	NA
AUU93213.1|93273_96510_-	conjugative relaxase	NA	U5J9B0	Bacillus_phage	27.3	2.4e-05
AUU93214.1|96509_98039_-	DUF87 domain-containing protein	NA	NA	NA	NA	NA
AUU93215.1|98040_98457_-	traK protein	NA	NA	NA	NA	NA
AUU93308.1|99229_99367_+	StbA	NA	NA	NA	NA	NA
AUU93216.1|99375_100092_+	StdB protein	NA	NA	NA	NA	NA
AUU93217.1|100093_100462_+	StbC	NA	NA	NA	NA	NA
AUU93309.1|100754_100988_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93218.1|101098_101419_-	CcgAII protein	NA	NA	NA	NA	NA
AUU93219.1|101473_101653_-	cobalamin biosynthesis protein CbiX	NA	NA	NA	NA	NA
AUU93220.1|102379_102889_-	antirestriction protein	NA	NA	NA	NA	NA
AUU93221.1|104241_104574_-	hypothetical protein	NA	NA	NA	NA	NA
AUU93222.1|104782_105067_-	cobalamin biosynthesis protein CbiX	NA	NA	NA	NA	NA
AUU93223.1|105135_105495_-	hypothetical protein	NA	NA	NA	NA	NA
AUU93224.1|105491_105788_-	cobalamin biosynthesis protein CbiX	NA	NA	NA	NA	NA
AUU93225.1|106673_106913_-	cobalamin biosynthesis protein CbiX	NA	NA	NA	NA	NA
AUU93226.1|106922_107327_-	antirestriction protein ArdR	NA	NA	NA	NA	NA
AUU93227.1|107384_107810_-	hypothetical protein	NA	NA	NA	NA	NA
AUU93228.1|108224_108665_+	peptidase	NA	A0A1W6JNS2	Morganella_phage	48.8	1.2e-27
AUU93229.1|108652_109918_+	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	53.8	2.2e-119
AUU93310.1|110068_110860_+	sprT domain-containing protein	NA	NA	NA	NA	NA
AUU93230.1|110874_111216_-	ArdK family transcriptional regulator	NA	NA	NA	NA	NA
AUU93231.1|111775_112495_+	RepB family plasmid replication initiator protein	NA	I3WF20	Macacine_betaherpesvirus	28.9	8.6e-20
AUU93232.1|112879_114100_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93233.1|114451_115021_-	recombinase family protein	NA	E5FFF9	Burkholderia_phage	43.2	5.2e-36
AUU93234.1|115160_115457_-|transposase	transposase	transposase	NA	NA	NA	NA
AUU93235.1|115466_116171_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUU93236.1|117138_117456_-	type IV secretion system protein VirB3	NA	NA	NA	NA	NA
AUU93237.1|117505_117799_-	conjugal transfer protein TraM	NA	NA	NA	NA	NA
AUU93311.1|117808_118090_-	transcriptional regulator	NA	NA	NA	NA	NA
AUU93238.1|118098_118833_-	traL protein	NA	NA	NA	NA	NA
AUU93312.1|118896_119247_+	KorB	NA	NA	NA	NA	NA
AUU93239.1|119262_119607_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93240.1|119603_119918_+	IncN plasmid KikA protein	NA	NA	NA	NA	NA
AUU93241.1|119953_120265_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93313.1|120473_120962_+	restriction endonuclease	NA	NA	NA	NA	NA
AUU93242.1|120966_121173_+	hypothetical protein	NA	NA	NA	NA	NA
AUU93243.1|121554_122988_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	50.6	7.0e-106
AUU93244.1|123021_124230_-	restriction endonuclease	NA	E5E3X4	Burkholderia_phage	42.5	1.2e-34
AUU93245.1|124242_124455_-	resolvase	NA	NA	NA	NA	NA
AUU93246.1|124496_125261_-|transposase	IS6 family transposase IS6100	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
AUU93247.1|125403_125670_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
AUU93248.1|125890_126373_-	trimethoprim-resistant dihydrofolate reductase DfrA14	NA	G3MBI7	Bacillus_virus	28.9	6.6e-16
AUU93249.1|126519_127533_+|integrase	integron integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
AUU93250.1|127603_128308_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUU93314.1|128337_128889_+	DNA invertase	NA	A0A0C4UR34	Shigella_phage	63.7	2.9e-52
AUU93251.1|128908_129868_+	cation transporter	NA	A0A1V0SED0	Indivirus	25.3	4.5e-08
134468:135814	attR	GCTTAGCGTGCTTTATTTAATGAGATGGTCACTCCCTCCTTCCCGGTACTATGCTGAGGACAGGCTTTCATTCGGAGAACTATCATGGAAAACATTGCGCTCATTGGTATCGATCTGGGTAAAAACTCTTTCCATATTCATTGCCAGGATCGTCGCGGGAAGGCTGTTTACCGTAAAAAATTTACCCGGCCAAAGTTGATCGAATTTTTGGCGACATGCCCCGCTACAACCATCGCAATGGAAGCCTGTGGCGGTTCTCACTTTATGGCACGCAAGTTGGAAGAGTTGGGGCATTCCCCAAAGCTGATATCACCACAATTTGTCCGCCCGTTCGTTAAAAGCAATAAAAACGACTTTGTCGACGCCGAAGCTATTTGTGAAGCTGCATCGCGTCCGTCTATGCGTTTTGTGCAGCCCAGAACGGAATCTCAGCAGGCAATGCGGGCTCTGCATCGTGTCCGTGAATCCCTGGTTCAGGATAAGGTAAAAACAACCAATCAAATGCATGCTTTTCTGCTGGAATTTGGCATTAGCGTTCCCCGAGGAGCTGCCGTTATTAGCCGACTGAGTACCATTCTTGAGGATAATAGTTTGCCTCTTTACCTCAGCCAGTTATTGCTGAAATTACAACAGCATTATCACTATCTTGTTGAGCAGATTAAAGATTTGGAATCCCAGTTGAAACGAAAGTTGGACGAAGATGAGGTTGGACAGCGCTTGCTGAGCATTCCCTGCGTCGGAACACTGACAGCGAGTACTATTTCAACTGAGATTGGCGACGGGAAGCAGTACGCCAGCAGCCGTGACTTTGCGGCGGCAACAGGGCTTGTACCTCGGCAGTACAGCACGGGAGGTAGGACGACATTGCTGGGAATTAGTAAGCGAGGTAATAAAAAGATCCGAACTTTGTTGGTTCAATGTGCCAGGGTATTCATACAAAAACTGGAACACCAGTCTGGCAAATTGGCCGATTGGGTCAGGGATTTACTGTGCCGGAAAAGCAACTTTGTCGTCACTTGTGCTCTGGCAAACAAGCTGGCCAGAATAGCCTGGGCCCTAACGGCACGACAGCAAACTTATGTAGCATAACGGCAGAAATACACCGGTTTAAAGAATTACTGATCTGGTTTTGCGAATACTGATATTGATGATACTAACGGCCCACCGGCCTGTTGAGGAACCTGTAAAACGGAAAGGCTCATTGAAGCCGTATATTTTCTGGAGGTTCATCAGGCGCGGAACTCATCAAGGCGCGGGAATAAAATCCCATTCAGACGCCGGATAGATTCAAGCAAGCCAACTTGTCGTCAAAATCGGTGTTGCAAAAACGGGAGTGACCATAGATTC	NA	NA	NA	NA
