assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	1	123593-123864	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Type I-E	GGAACAGCCCCGCGTGCGCGGGGAAGAC,GGAACAGCCCCGCGTGCGCGGGGAAGAC,GGAACAGCCCCGCGTGCGCGGGGAAGAC	28,28,28	0	0	NA	NA	NA:NA:NA	4,4,4	4	TypeI-E	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|61aa|up_8|CP025990.1_116785_116968_-,NA	NA|136aa|up_9|CP025990.1_116016_116424_+	TIGR03667, Rv3369, PPOX class probable F420-dependent enzyme, Rv3369 family	NA|61aa|up_8|CP025990.1_116785_116968_-	NA	NA|239aa|up_7|CP025990.1_118032_118749_-	cd08899, SRPBCC_CalC_Aha1-like_6, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	NA|189aa|up_6|CP025990.1_118939_119506_-	pfam01243, Putative_PNPOx, Pyridoxamine 5'-phosphate oxidase	NA|157aa|up_5|CP025990.1_119565_120036_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|175aa|up_4|CP025990.1_120032_120557_+	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme	NA|207aa|up_3|CP025990.1_120678_121299_-	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|224aa|up_2|CP025990.1_121295_121967_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|284aa|up_1|CP025990.1_122307_123159_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|114aa|up_0|CP025990.1_123194_123536_-	pfam01527, HTH_Tnp_1, Transposase	cas2|120aa|down_0|CP025990.1_123904_124264_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|332aa|down_1|CP025990.1_124260_125256_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|222aa|down_2|CP025990.1_125252_125918_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|239aa|down_3|CP025990.1_125917_126634_-	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5)	cas7|379aa|down_4|CP025990.1_126630_127767_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|211aa|down_5|CP025990.1_127763_128396_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|543aa|down_6|CP025990.1_128392_130021_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|912aa|down_7|CP025990.1_130007_132743_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|284aa|down_8|CP025990.1_134076_134928_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|114aa|down_9|CP025990.1_134963_135305_-	pfam01527, HTH_Tnp_1, Transposase
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	2	133484-134003	2,2	PILER-CR,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Type I-E	GGAACAGCCCCGCGTGCGCGGGGAGGAC,GGAACAGCCCCGCGTGCGCGGGGAGGAC	28,28	0	0	NA	NA	NA:NA	4,8	8	TypeI-E	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA,NA	NA|284aa|up_9|CP025990.1_122307_123159_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|114aa|up_8|CP025990.1_123194_123536_-	pfam01527, HTH_Tnp_1, Transposase	cas2|120aa|up_7|CP025990.1_123904_124264_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|332aa|up_6|CP025990.1_124260_125256_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|222aa|up_5|CP025990.1_125252_125918_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|239aa|up_4|CP025990.1_125917_126634_-	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5)	cas7|379aa|up_3|CP025990.1_126630_127767_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|211aa|up_2|CP025990.1_127763_128396_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|543aa|up_1|CP025990.1_128392_130021_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|912aa|up_0|CP025990.1_130007_132743_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|284aa|down_0|CP025990.1_134076_134928_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|114aa|down_1|CP025990.1_134963_135305_-	pfam01527, HTH_Tnp_1, Transposase	NA|260aa|down_2|CP025990.1_135948_136728_-	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|316aa|down_3|CP025990.1_136724_137672_-	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|348aa|down_4|CP025990.1_137668_138712_-	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|380aa|down_5|CP025990.1_138711_139851_-	cd01162, IBD, Isobutyryl-CoA dehydrogenase	NA|500aa|down_6|CP025990.1_139860_141360_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|246aa|down_7|CP025990.1_142393_143131_-	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|359aa|down_8|CP025990.1_143127_144204_-	TIGR01686, modular_polyketide_synthase, FkbH-like domain	NA|384aa|down_9|CP025990.1_144200_145352_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	3	135362-135695	3,2,3	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Type I-E	GGAACAGCCCCGCGTGCGCGGGGAGGAC,GGAACAGCCCCGCGTGCGCGGGGAGGAC,GGAACAGCCCCGCGTGCGCGGGGAGGAC	28,28,28	0	0	NA	NA	NA:NA:NA	5,5,5	5	TypeI-E	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA,NA	cas2|120aa|up_9|CP025990.1_123904_124264_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|332aa|up_8|CP025990.1_124260_125256_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|222aa|up_7|CP025990.1_125252_125918_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|239aa|up_6|CP025990.1_125917_126634_-	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5)	cas7|379aa|up_5|CP025990.1_126630_127767_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|211aa|up_4|CP025990.1_127763_128396_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|543aa|up_3|CP025990.1_128392_130021_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|912aa|up_2|CP025990.1_130007_132743_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|284aa|up_1|CP025990.1_134076_134928_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|114aa|up_0|CP025990.1_134963_135305_-	pfam01527, HTH_Tnp_1, Transposase	NA|260aa|down_0|CP025990.1_135948_136728_-	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|316aa|down_1|CP025990.1_136724_137672_-	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase	NA|348aa|down_2|CP025990.1_137668_138712_-	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|380aa|down_3|CP025990.1_138711_139851_-	cd01162, IBD, Isobutyryl-CoA dehydrogenase	NA|500aa|down_4|CP025990.1_139860_141360_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|246aa|down_5|CP025990.1_142393_143131_-	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|359aa|down_6|CP025990.1_143127_144204_-	TIGR01686, modular_polyketide_synthase, FkbH-like domain	NA|384aa|down_7|CP025990.1_144200_145352_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|87aa|down_8|CP025990.1_145355_145616_-	pfam00550, PP-binding, Phosphopantetheine attachment site	NA|289aa|down_9|CP025990.1_145643_146510_-	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	4	207411-208352	4,4,3	CRT,PILER-CR,CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	NNNNGGAACAGCCCCGCGTGCGCGGGGACGAC,GGAACAGCCCCGCGTGCGCGGGGACGAC,GGAACAGCCCCGCGTGCGCGGGGACGAC	32,28,28	0	0	NA	NA	NA:NA:NA	15,14,14	15	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA,NA|97aa|down_6|CP025990.1_214564_214855_+	NA|1190aa|up_9|CP025990.1_146506_150076_-	cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations	NA|3107aa|up_8|CP025990.1_150087_159408_-	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|2204aa|up_7|CP025990.1_159523_166135_-	cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations	NA|2114aa|up_6|CP025990.1_166167_172509_-	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|3769aa|up_5|CP025990.1_172563_183870_-	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|2091aa|up_4|CP025990.1_183894_190167_-	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|4113aa|up_3|CP025990.1_190183_202522_-	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|448aa|up_2|CP025990.1_202448_203792_+	TIGR04444, hypothetical_protein_ThecoDRAFT_3161, chorismatase, FkbO/Hyg5 family	NA|383aa|up_1|CP025990.1_203863_205012_+	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family	NA|730aa|up_0|CP025990.1_205027_207217_-	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain	NA|408aa|down_0|CP025990.1_209082_210306_-	COG3629, DnrI, DNA-binding transcriptional activator of the SARP family [Signal transduction mechanisms]	NA|230aa|down_1|CP025990.1_210512_211202_+	pfam11361, DUF3159, Protein of unknown function (DUF3159)	NA|332aa|down_2|CP025990.1_211595_212591_-	PRK02901, PRK02901, O-succinylbenzoate synthase; Provisional	NA|101aa|down_3|CP025990.1_212590_212893_-	PRK14072, PRK14072, diphosphate--fructose-6-phosphate 1-phosphotransferase	NA|77aa|down_4|CP025990.1_213185_213416_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|296aa|down_5|CP025990.1_213442_214330_-	pfam13560, HTH_31, Helix-turn-helix domain	NA|97aa|down_6|CP025990.1_214564_214855_+	NA	NA|953aa|down_7|CP025990.1_215352_218211_-	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|841aa|down_8|CP025990.1_218255_220778_-	pfam13191, AAA_16, AAA ATPase domain	NA|927aa|down_9|CP025990.1_220774_223555_-	pfam13191, AAA_16, AAA ATPase domain
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	6	408215-409095	5,5,5	PILER-CR,CRISPRCasFinder,CRT	no	cas7,cas5,cas3,cas4,cas1,cas2	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	GTCCTCATCGCTCCTACGAGGAGTTCCAAC,GTCCTCATCGCTCCTACGAGGAGTTCCAAC,GTCCTCATCGCTCCTACGAGGAGTTCCAAC	30,30,30	0	0	NA	NA	NA:NA:NA	9,13,13	13	Unclear	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA,NA|480aa|down_1|CP025990.1_410712_412152_+,NA|142aa|down_8|CP025990.1_418868_419294_+	NA|275aa|up_9|CP025990.1_392495_393320_+	cd05233, SDR_c, classical (c) SDRs	NA|256aa|up_8|CP025990.1_393440_394208_+	PRK07231, FabG-like, SDR family oxidoreductase	NA|407aa|up_7|CP025990.1_394413_395634_+	cd01155, ACAD_FadE2, Acyl-CoA dehydrogenases similar to fadE2	NA|228aa|up_6|CP025990.1_395850_396534_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|369aa|up_5|CP025990.1_396678_397785_-	cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase	NA|476aa|up_4|CP025990.1_397852_399280_-	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like	NA|408aa|up_3|CP025990.1_399432_400656_-	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|921aa|up_2|CP025990.1_401573_404336_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|397aa|up_1|CP025990.1_404739_405930_+	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain	NA|428aa|up_0|CP025990.1_406505_407789_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|242aa|down_0|CP025990.1_409990_410716_+	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|480aa|down_1|CP025990.1_410712_412152_+	NA	cas7|341aa|down_2|CP025990.1_412148_413171_+	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP	cas5|220aa|down_3|CP025990.1_413167_413827_+	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas3|794aa|down_4|CP025990.1_413823_416205_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas4|166aa|down_5|CP025990.1_416201_416699_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|327aa|down_6|CP025990.1_416698_417679_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|88aa|down_7|CP025990.1_417681_417945_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|142aa|down_8|CP025990.1_418868_419294_+	NA	NA|534aa|down_9|CP025990.1_419692_421294_-	cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	7	418057-418284	6,6,6	PILER-CR,CRISPRCasFinder,CRT	no	cas7,cas5,cas3,cas4,cas1,cas2	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	GTCCTCATCGCTCCTACGAGGAGTTCCAAC,GTCCTCATCGCTCCTACGAGGAGTTCCAAC,GTCCTCATCGCTCCTACGAGGAGTTCCAAC	30,30,30	0	0	NA	NA	NA:NA:NA	3,3,3	3	Unclear	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|480aa|up_6|CP025990.1_410712_412152_+,NA|142aa|down_0|CP025990.1_418868_419294_+,NA|193aa|down_8|CP025990.1_428825_429404_+	NA|397aa|up_9|CP025990.1_404739_405930_+	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain	NA|428aa|up_8|CP025990.1_406505_407789_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|242aa|up_7|CP025990.1_409990_410716_+	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|480aa|up_6|CP025990.1_410712_412152_+	NA	cas7|341aa|up_5|CP025990.1_412148_413171_+	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP	cas5|220aa|up_4|CP025990.1_413167_413827_+	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas3|794aa|up_3|CP025990.1_413823_416205_+	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3	cas4|166aa|up_2|CP025990.1_416201_416699_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|327aa|up_1|CP025990.1_416698_417679_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|88aa|up_0|CP025990.1_417681_417945_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|142aa|down_0|CP025990.1_418868_419294_+	NA	NA|534aa|down_1|CP025990.1_419692_421294_-	cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD	NA|155aa|down_2|CP025990.1_421290_421755_-	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit	NA|253aa|down_3|CP025990.1_421941_422700_-	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs	NA|384aa|down_4|CP025990.1_422776_423928_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|303aa|down_5|CP025990.1_424190_425099_-	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|614aa|down_6|CP025990.1_425490_427332_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|273aa|down_7|CP025990.1_427442_428261_-	cd00519, Lipase_3, Lipase (class 3)	NA|193aa|down_8|CP025990.1_428825_429404_+	NA	NA|543aa|down_9|CP025990.1_429373_431002_-	PRK09255, PRK09255, malate synthase; Validated
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	8	478656-479050	7,7,7	CRISPRCasFinder,PILER-CR,CRT	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	CGGCTCACCCCCGCTTGCGCGGGGCTTTC,GGCTCACCCCCGCTTGCGCGGGGCTTTC,GGCTCACCCCCGCTTGCGCGGGGCTTTC	29,28,28	0	0	NA	NA	NA:NA:NA	6,6,6	6	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|92aa|up_6|CP025990.1_471619_471895_-,NA|107aa|down_3|CP025990.1_481247_481568_-,NA|287aa|down_4|CP025990.1_482600_483461_+	NA|335aa|up_9|CP025990.1_466121_467126_-	pfam01370, Epimerase, NAD dependent epimerase/dehydratase family	NA|408aa|up_8|CP025990.1_467157_468381_-	pfam08484, Methyltransf_14, C-methyltransferase C-terminal domain	NA|939aa|up_7|CP025990.1_468541_471358_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|92aa|up_6|CP025990.1_471619_471895_-	NA	NA|373aa|up_5|CP025990.1_471864_472983_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|263aa|up_4|CP025990.1_472979_473768_-	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel	NA|429aa|up_3|CP025990.1_474013_475300_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|278aa|up_2|CP025990.1_475179_476013_-	cd03142, GATase1_ThuA, Type 1 glutamine amidotransferase (GATase1)-like domain found in Sinorhizobium meliloti Rm1021 ThuA (SmThuA)	NA|211aa|up_1|CP025990.1_476420_477053_-	TIGR00026, Hypothetical_protein_Rv1261c/MT1299/Mb1292c	NA|166aa|up_0|CP025990.1_477632_478130_-	cd04685, Nudix_Hydrolase_26, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|258aa|down_0|CP025990.1_479125_479899_-	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein	NA|245aa|down_1|CP025990.1_479895_480630_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|188aa|down_2|CP025990.1_480626_481190_-	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator	NA|107aa|down_3|CP025990.1_481247_481568_-	NA	NA|287aa|down_4|CP025990.1_482600_483461_+	NA	NA|439aa|down_5|CP025990.1_483484_484801_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|259aa|down_6|CP025990.1_484958_485735_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|347aa|down_7|CP025990.1_485718_486759_-	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]	NA|280aa|down_8|CP025990.1_486800_487640_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|247aa|down_9|CP025990.1_487636_488377_-	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	9	481652-482209	8,8,8	CRISPRCasFinder,CRT,PILER-CR	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	GTTGGAACTCCTCGTAGGAGCGATGAGGAC,GTTGGAACTCCTCGTAGGAGCGATGAGGACC,GTCCTCATCGCTCCTACGAGGAGTTCCAAC	30,31,30	0	0	NA	NA	NA:NA:NA	8,8,7	8	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|107aa|up_0|CP025990.1_481247_481568_-,NA|287aa|down_0|CP025990.1_482600_483461_+,NA|162aa|down_9|CP025990.1_491322_491808_+	NA|373aa|up_9|CP025990.1_471864_472983_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|263aa|up_8|CP025990.1_472979_473768_-	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel	NA|429aa|up_7|CP025990.1_474013_475300_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|278aa|up_6|CP025990.1_475179_476013_-	cd03142, GATase1_ThuA, Type 1 glutamine amidotransferase (GATase1)-like domain found in Sinorhizobium meliloti Rm1021 ThuA (SmThuA)	NA|211aa|up_5|CP025990.1_476420_477053_-	TIGR00026, Hypothetical_protein_Rv1261c/MT1299/Mb1292c	NA|166aa|up_4|CP025990.1_477632_478130_-	cd04685, Nudix_Hydrolase_26, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|258aa|up_3|CP025990.1_479125_479899_-	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein	NA|245aa|up_2|CP025990.1_479895_480630_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|188aa|up_1|CP025990.1_480626_481190_-	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator	NA|107aa|up_0|CP025990.1_481247_481568_-	NA	NA|287aa|down_0|CP025990.1_482600_483461_+	NA	NA|439aa|down_1|CP025990.1_483484_484801_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|259aa|down_2|CP025990.1_484958_485735_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|347aa|down_3|CP025990.1_485718_486759_-	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]	NA|280aa|down_4|CP025990.1_486800_487640_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|247aa|down_5|CP025990.1_487636_488377_-	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|231aa|down_6|CP025990.1_488823_489516_+	cd17767, UP_EcUdp-like, uridine phosphorylases similar to Escherichia coli Udp and related phosphorylases	NA|337aa|down_7|CP025990.1_489512_490523_+	cd04740, DHOD_1B_like, Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain	NA|268aa|down_8|CP025990.1_490519_491323_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|162aa|down_9|CP025990.1_491322_491808_+	NA
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	10	554773-555412	9,9,9	CRT,PILER-CR,CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	GGAACAGCCCCGCGTGCGCGGGGACGAC,GGAACAGCCCCGCGTGCGCGGGGACGAC,GGAACAGCCCCGCGTGCGCGGGGACGAC	28,28,28	0	0	NA	NA	NA:NA:NA	10,9,9	10	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|94aa|up_6|CP025990.1_545981_546263_-,NA|289aa|up_5|CP025990.1_546956_547823_-,NA|76aa|up_0|CP025990.1_554369_554597_-,NA	NA|427aa|up_9|CP025990.1_542200_543481_+	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|307aa|up_8|CP025990.1_543581_544502_+	pfam14100, PmoA, Methane oxygenase PmoA	NA|422aa|up_7|CP025990.1_544645_545911_+	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed	NA|94aa|up_6|CP025990.1_545981_546263_-	NA	NA|289aa|up_5|CP025990.1_546956_547823_-	NA	NA|430aa|up_4|CP025990.1_547819_549109_-	COG3864, COG3864, Uncharacterized protein conserved in bacteria [Function unknown]	NA|364aa|up_3|CP025990.1_549156_550248_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|392aa|up_2|CP025990.1_550716_551892_-	TIGR01426, Glycosyl_transferase, glycosyltransferase, MGT family	NA|384aa|up_1|CP025990.1_552542_553694_-	pfam06441, EHN, Epoxide hydrolase N-terminus	NA|76aa|up_0|CP025990.1_554369_554597_-	NA	NA|68aa|down_0|CP025990.1_555786_555990_-	COG1846, MarR, Transcriptional regulators [Transcription]	NA|210aa|down_1|CP025990.1_556245_556875_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|234aa|down_2|CP025990.1_557026_557728_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|368aa|down_3|CP025990.1_557983_559087_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|454aa|down_4|CP025990.1_559195_560557_-	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases	NA|297aa|down_5|CP025990.1_560757_561648_-	PRK06224, PRK06224, citryl-CoA lyase	NA|408aa|down_6|CP025990.1_561644_562868_-	pfam02515, CoA_transf_3, CoA-transferase family III	NA|502aa|down_7|CP025990.1_563207_564713_-	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|214aa|down_8|CP025990.1_564712_565354_-	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family	NA|329aa|down_9|CP025990.1_565350_566337_-	COG3181, COG3181, Uncharacterized protein conserved in bacteria [Function unknown]
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	11	711658-712113	10,10,10	PILER-CR,CRISPRCasFinder,CRT	no	WYL,csa3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Type I-A	GGAACAGCCCCGCGTGCGCGGGGAGGAC,GGAACAGCCCCGCGTGCGCGGGGAGGAC,GGAACAGCCCCGCGTGCGCGGGGAGGAC	28,28,28	0	0	NA	NA	NA:NA:NA	7,7,7	7	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|72aa|up_9|CP025990.1_696824_697040_-,NA|114aa|down_7|CP025990.1_724589_724931_+,NA|132aa|down_8|CP025990.1_725184_725580_+	NA|72aa|up_9|CP025990.1_696824_697040_-	NA	NA|273aa|up_8|CP025990.1_697747_698566_+	pfam13560, HTH_31, Helix-turn-helix domain	NA|64aa|up_7|CP025990.1_698587_698779_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|248aa|up_6|CP025990.1_699310_700054_+	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|527aa|up_5|CP025990.1_700486_702067_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|358aa|up_4|CP025990.1_703152_704226_-	COG2518, Pcm, Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|748aa|up_3|CP025990.1_704556_706800_-	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair]	WYL|320aa|up_2|CP025990.1_706862_707822_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|631aa|up_1|CP025990.1_708078_709971_-	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|324aa|up_0|CP025990.1_710497_711469_-	PRK11453, PRK11453, O-acetylserine/cysteine exporter	csa3|138aa|down_0|CP025990.1_712483_712897_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|266aa|down_1|CP025990.1_713372_714170_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|330aa|down_2|CP025990.1_714162_715152_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|239aa|down_3|CP025990.1_715242_715959_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|265aa|down_4|CP025990.1_716773_717568_-	cd05152, MPH2', Macrolide 2'-Phosphotransferase	NA|650aa|down_5|CP025990.1_719760_721710_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|861aa|down_6|CP025990.1_721826_724409_+	pfam13472, Lipase_GDSL_2, GDSL-like Lipase/Acylhydrolase family	NA|114aa|down_7|CP025990.1_724589_724931_+	NA	NA|132aa|down_8|CP025990.1_725184_725580_+	NA	NA|701aa|down_9|CP025990.1_726889_728992_+	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	12	718127-718684	11,11,11	CRT,PILER-CR,CRISPRCasFinder	no	WYL,csa3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Type I-A	GGTCCTCATCGCTCCTACGAGGAGT,GTCCTCATCGCTCCTACGAGGAGTTCCAAC,GTCCTCATCGCTCCTACGAGGAGTTCCAAC	25,30,30	0	0	NA	NA	NA:NA:NA	8,7,8	8	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA,NA|114aa|down_2|CP025990.1_724589_724931_+,NA|132aa|down_3|CP025990.1_725184_725580_+	NA|358aa|up_9|CP025990.1_703152_704226_-	COG2518, Pcm, Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]	NA|748aa|up_8|CP025990.1_704556_706800_-	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair]	WYL|320aa|up_7|CP025990.1_706862_707822_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|631aa|up_6|CP025990.1_708078_709971_-	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|324aa|up_5|CP025990.1_710497_711469_-	PRK11453, PRK11453, O-acetylserine/cysteine exporter	csa3|138aa|up_4|CP025990.1_712483_712897_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|266aa|up_3|CP025990.1_713372_714170_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|330aa|up_2|CP025990.1_714162_715152_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|239aa|up_1|CP025990.1_715242_715959_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|265aa|up_0|CP025990.1_716773_717568_-	cd05152, MPH2', Macrolide 2'-Phosphotransferase	NA|650aa|down_0|CP025990.1_719760_721710_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|861aa|down_1|CP025990.1_721826_724409_+	pfam13472, Lipase_GDSL_2, GDSL-like Lipase/Acylhydrolase family	NA|114aa|down_2|CP025990.1_724589_724931_+	NA	NA|132aa|down_3|CP025990.1_725184_725580_+	NA	NA|701aa|down_4|CP025990.1_726889_728992_+	pfam13385, Laminin_G_3, Concanavalin A-like lectin/glucanases superfamily	NA|821aa|down_5|CP025990.1_730121_732584_-	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]	NA|350aa|down_6|CP025990.1_732651_733701_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|377aa|down_7|CP025990.1_733697_734828_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|291aa|down_8|CP025990.1_734827_735700_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|332aa|down_9|CP025990.1_735777_736773_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	13	791846-792836	12,12,12	PILER-CR,CRISPRCasFinder,CRT	no	cas6,WYL	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	GTTG-------CACCGGCCCTCCGGGGCCGGTGAGGATCGCAAC,GTTGCACCGGCCCTCCGGGGCCGGTGAGGATCGCAACG,GTTGCACCGGCCCTCCGGGGCCGGTGAGGATCGCAAC	44,38,37	0	0	NA	NA	NA:I-C,III-B:I-C,III-B	13,13,13	13	Unclear	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|932aa|up_1|CP025990.1_786688_789484_-,NA|140aa|down_0|CP025990.1_792855_793275_+	NA|1023aa|up_9|CP025990.1_775857_778926_+	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain	NA|294aa|up_8|CP025990.1_779255_780137_+	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain	NA|74aa|up_7|CP025990.1_780348_780570_+	pfam03621, MbtH, MbtH-like protein	NA|279aa|up_6|CP025990.1_780743_781580_+	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	cas6|230aa|up_5|CP025990.1_782300_782990_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|456aa|up_4|CP025990.1_783581_784949_-	pfam00743, FMO-like, Flavin-binding monooxygenase-like	NA|434aa|up_3|CP025990.1_784802_786104_+	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR	NA|211aa|up_2|CP025990.1_786000_786633_+	pfam17928, TetR_C_22, Tetracyclin repressor-like, C-terminal domain	NA|932aa|up_1|CP025990.1_786688_789484_-	NA	NA|591aa|up_0|CP025990.1_789480_791253_-	PRK14083, PRK14083, HSP90 family protein; Provisional	NA|140aa|down_0|CP025990.1_792855_793275_+	NA	NA|248aa|down_1|CP025990.1_793319_794063_-	cd03146, GAT1_Peptidase_E, Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E	NA|172aa|down_2|CP025990.1_794461_794977_+	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme	NA|383aa|down_3|CP025990.1_795589_796738_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|486aa|down_4|CP025990.1_797205_798663_+	cd18822, GH43_CtGH43-like, Glycosyl hydrolase family 43 protein such as Clostridium thermocellum exo-beta-1,3-galactanase (Ct1,3Gal43A or CtGH43)	NA|473aa|down_5|CP025990.1_798853_800272_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	WYL|333aa|down_6|CP025990.1_800335_801334_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|154aa|down_7|CP025990.1_801448_801910_-	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|248aa|down_8|CP025990.1_802929_803673_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|268aa|down_9|CP025990.1_803951_804755_+	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	14	1142119-1142806	13,13,13	PILER-CR,CRISPRCasFinder,CRT	no	WYL	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	GTCCTCATCGCCCCTAAGAGGGGTCACAAC,GTCCTCATCGCCCCTAAGAGGGGTCACAAC,GTCCTCATCGCCCCTAAGAGGGGTCACAAC	30,30,30	0	0	NA	NA	NA:NA:NA	9,10,10	10	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA,NA|176aa|down_0|CP025990.1_1142825_1143353_-	NA|116aa|up_9|CP025990.1_1131269_1131617_-	pfam12680, SnoaL_2, SnoaL-like domain	WYL|326aa|up_8|CP025990.1_1131692_1132670_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|172aa|up_7|CP025990.1_1132855_1133371_+	PRK11433, PRK11433, aldehyde oxidoreductase 2Fe-2S subunit; Provisional	NA|331aa|up_6|CP025990.1_1133367_1134360_+	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|704aa|up_5|CP025990.1_1134356_1136468_+	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|319aa|up_4|CP025990.1_1136707_1137664_-	pfam00296, Bac_luciferase, Luciferase-like monooxygenase	NA|420aa|up_3|CP025990.1_1137707_1138967_-	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters	NA|189aa|up_2|CP025990.1_1139551_1140118_+	COG3226, COG3226, Uncharacterized protein conserved in bacteria [Function unknown]	NA|138aa|up_1|CP025990.1_1140217_1140631_+	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|324aa|up_0|CP025990.1_1140817_1141789_+	cd02558, PSRA_1, Pseudouridine synthase, a subgroup of the RluA family	NA|176aa|down_0|CP025990.1_1142825_1143353_-	NA	NA|207aa|down_1|CP025990.1_1144088_1144709_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|449aa|down_2|CP025990.1_1144705_1146052_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|249aa|down_3|CP025990.1_1146058_1146805_-	pfam01061, ABC2_membrane, ABC-2 type transporter	NA|312aa|down_4|CP025990.1_1146822_1147758_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|150aa|down_5|CP025990.1_1148039_1148489_+	pfam01527, HTH_Tnp_1, Transposase	NA|290aa|down_6|CP025990.1_1148524_1149394_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|287aa|down_7|CP025990.1_1149461_1150322_-	COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]	NA|207aa|down_8|CP025990.1_1150318_1150939_-	pfam04961, FTCD_C, Formiminotransferase-cyclodeaminase	NA|264aa|down_9|CP025990.1_1151888_1152680_+	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	15	1148002-1148090	14	CRISPRCasFinder	no	WYL	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	GTCGTTCCCGCGCACGCGGGGCTGTTCC	28	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|176aa|up_4|CP025990.1_1142825_1143353_-,NA|142aa|down_7|CP025990.1_1158703_1159129_+,NA|61aa|down_9|CP025990.1_1161169_1161352_+	NA|319aa|up_9|CP025990.1_1136707_1137664_-	pfam00296, Bac_luciferase, Luciferase-like monooxygenase	NA|420aa|up_8|CP025990.1_1137707_1138967_-	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters	NA|189aa|up_7|CP025990.1_1139551_1140118_+	COG3226, COG3226, Uncharacterized protein conserved in bacteria [Function unknown]	NA|138aa|up_6|CP025990.1_1140217_1140631_+	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|324aa|up_5|CP025990.1_1140817_1141789_+	cd02558, PSRA_1, Pseudouridine synthase, a subgroup of the RluA family	NA|176aa|up_4|CP025990.1_1142825_1143353_-	NA	NA|207aa|up_3|CP025990.1_1144088_1144709_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|449aa|up_2|CP025990.1_1144705_1146052_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|249aa|up_1|CP025990.1_1146058_1146805_-	pfam01061, ABC2_membrane, ABC-2 type transporter	NA|312aa|up_0|CP025990.1_1146822_1147758_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|290aa|down_0|CP025990.1_1148524_1149394_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|287aa|down_1|CP025990.1_1149461_1150322_-	COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]	NA|207aa|down_2|CP025990.1_1150318_1150939_-	pfam04961, FTCD_C, Formiminotransferase-cyclodeaminase	NA|264aa|down_3|CP025990.1_1151888_1152680_+	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family	NA|443aa|down_4|CP025990.1_1152676_1154005_+	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF	NA|435aa|down_5|CP025990.1_1154131_1155436_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|262aa|down_6|CP025990.1_1157206_1157992_+	cd17646, A_NRPS_AB3403-like, Peptide Synthetase	NA|142aa|down_7|CP025990.1_1158703_1159129_+	NA	NA|142aa|down_8|CP025990.1_1160383_1160809_-	pfam04686, SsgA, Streptomyces sporulation and cell division protein, SsgA	NA|61aa|down_9|CP025990.1_1161169_1161352_+	NA
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	17	2049619-2049711	16	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	CGGCGCGGGCGGCACCCGGCTGGAACAGCGCGGG	34	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|61aa|up_4|CP025990.1_2044750_2044933_-,NA|139aa|down_3|CP025990.1_2054324_2054741_-,NA|93aa|down_7|CP025990.1_2057083_2057362_-	NA|308aa|up_9|CP025990.1_2041205_2042129_-	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|199aa|up_8|CP025990.1_2042205_2042802_+	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase	NA|116aa|up_7|CP025990.1_2042912_2043260_+	COG2331, COG2331, Uncharacterized protein conserved in bacteria [Function unknown]	NA|222aa|up_6|CP025990.1_2043404_2044070_+	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB	NA|146aa|up_5|CP025990.1_2044211_2044649_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|61aa|up_4|CP025990.1_2044750_2044933_-	NA	NA|69aa|up_3|CP025990.1_2045206_2045413_+	pfam14013, MT0933_antitox, MT0933-like antitoxin protein	NA|167aa|up_2|CP025990.1_2045721_2046222_-	cd00886, MogA_MoaB, MogA_MoaB family	NA|422aa|up_1|CP025990.1_2046410_2047676_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family	NA|373aa|up_0|CP025990.1_2048192_2049311_-	cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate	NA|472aa|down_0|CP025990.1_2049734_2051150_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|235aa|down_1|CP025990.1_2051146_2051851_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|487aa|down_2|CP025990.1_2052489_2053950_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|139aa|down_3|CP025990.1_2054324_2054741_-	NA	NA|207aa|down_4|CP025990.1_2054957_2055578_+	pfam01872, RibD_C, RibD C-terminal domain	NA|313aa|down_5|CP025990.1_2055676_2056615_+	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|141aa|down_6|CP025990.1_2056651_2057074_-	TIGR03668, Rv0121_F420, PPOX class probable F420-dependent enzyme, Rv0121 family	NA|93aa|down_7|CP025990.1_2057083_2057362_-	NA	NA|230aa|down_8|CP025990.1_2057615_2058305_+	cd12922, VKOR_5, Vitamin K epoxide reductase family in bacteria	NA|273aa|down_9|CP025990.1_2058354_2059173_-	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	18	2981839-2982294	14,17,14	PILER-CR,CRISPRCasFinder,CRT	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	CGGCTCACCCCCGCTTGCGCGGGGCTTTC,GAAAGCCCCGCGCAAGCGGGGGTGAGCCG,GAAAGCCCCGCGCAAGCGGGGGTGAGCCG	29,29,29	0	0	NA	NA	NA:NA:NA	6,7,7	7	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|66aa|up_9|CP025990.1_2970390_2970588_-,NA|144aa|down_2|CP025990.1_2984133_2984565_+	NA|66aa|up_9|CP025990.1_2970390_2970588_-	NA	NA|414aa|up_8|CP025990.1_2970904_2972146_-	cd01830, XynE_like, SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE	NA|521aa|up_7|CP025990.1_2972320_2973883_+	TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase	NA|159aa|up_6|CP025990.1_2973918_2974395_+	pfam10722, YbjN, Putative bacterial sensory transduction regulator	NA|251aa|up_5|CP025990.1_2974994_2975747_+	PRK14120, gpmA, phosphoglyceromutase; Provisional	NA|403aa|up_4|CP025990.1_2975875_2977084_+	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR	NA|227aa|up_3|CP025990.1_2977080_2977761_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|436aa|up_2|CP025990.1_2978274_2979582_+	pfam06524, NOA36, NOA36 protein	NA|308aa|up_1|CP025990.1_2979587_2980511_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|294aa|up_0|CP025990.1_2980637_2981519_+	COG0506, PutA, Proline dehydrogenase [Amino acid transport and metabolism]	NA|61aa|down_0|CP025990.1_2982462_2982645_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|278aa|down_1|CP025990.1_2982641_2983475_-	pfam13560, HTH_31, Helix-turn-helix domain	NA|144aa|down_2|CP025990.1_2984133_2984565_+	NA	NA|332aa|down_3|CP025990.1_2985166_2986162_+	TIGR04078, radical_SAM_domain_protein_protein, peptide modification radical SAM enzyme, YydG family	NA|598aa|down_4|CP025990.1_2986158_2987952_+	cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B	NA|99aa|down_5|CP025990.1_2987948_2988245_+	pfam05402, PqqD, Coenzyme PQQ synthesis protein D (PqqD)	NA|503aa|down_6|CP025990.1_2988283_2989792_+	PRK02983, lysS, bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX	NA|131aa|down_7|CP025990.1_2989827_2990220_+	pfam14430, Imm1, Immunity protein Imm1	NA|279aa|down_8|CP025990.1_2990442_2991279_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|71aa|down_9|CP025990.1_2991453_2991666_+	pfam12728, HTH_17, Helix-turn-helix domain
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	19	3490633-3490993	15,18,15	PILER-CR,CRISPRCasFinder,CRT	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	GTCCTCATCGCTCCTACGAGGAGTTCCAAC,GTTGGAACTCCTCGTAGGAGCGATGAGGAC,GTTGGAACTCCTCGTAGGAGCGATGAGGAC	30,30,30	0	0	NA	NA	NA:NA:NA	4,5,5	5	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|61aa|up_9|CP025990.1_3475877_3476060_-,NA|63aa|up_7|CP025990.1_3477170_3477359_-,NA|162aa|up_5|CP025990.1_3479479_3479965_+,NA|77aa|down_2|CP025990.1_3496717_3496948_-,NA|81aa|down_4|CP025990.1_3499649_3499892_-,NA|277aa|down_7|CP025990.1_3503119_3503950_+,NA|138aa|down_9|CP025990.1_3506511_3506925_-	NA|61aa|up_9|CP025990.1_3475877_3476060_-	NA	NA|272aa|up_8|CP025990.1_3476358_3477174_-	pfam14011, ESX-1_EspG, EspG family	NA|63aa|up_7|CP025990.1_3477170_3477359_-	NA	NA|195aa|up_6|CP025990.1_3477803_3478388_-	cd19540, LCL_NRPS-like, LCL-type Condensation domain of nonribosomal peptide synthetases (NRPSs) and similar domains	NA|162aa|up_5|CP025990.1_3479479_3479965_+	NA	NA|954aa|up_4|CP025990.1_3480091_3482953_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|231aa|up_3|CP025990.1_3484951_3485644_+	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|302aa|up_2|CP025990.1_3487068_3487974_-	pfam05711, TylF, Macrocin-O-methyltransferase (TylF)	NA|226aa|up_1|CP025990.1_3489019_3489697_-	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|152aa|up_0|CP025990.1_3490086_3490542_-	COG4319, COG4319, Ketosteroid isomerase homolog [Function unknown]	NA|250aa|down_0|CP025990.1_3494007_3494757_-	pfam07591, PT-HINT, Pretoxin HINT domain	NA|126aa|down_1|CP025990.1_3495427_3495805_-	pfam14206, Cys_rich_CPCC, Cysteine-rich CPCC	NA|77aa|down_2|CP025990.1_3496717_3496948_-	NA	NA|62aa|down_3|CP025990.1_3498163_3498349_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|81aa|down_4|CP025990.1_3499649_3499892_-	NA	NA|91aa|down_5|CP025990.1_3502078_3502351_+	pfam13186, SPASM, Iron-sulfur cluster-binding domain	NA|248aa|down_6|CP025990.1_3502365_3503109_+	COG3910, COG3910, Predicted ATPase [General function prediction only]	NA|277aa|down_7|CP025990.1_3503119_3503950_+	NA	NA|195aa|down_8|CP025990.1_3505886_3506471_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|138aa|down_9|CP025990.1_3506511_3506925_-	NA
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	20	3491195-3491357	19	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	GTTGGAACTCCTCGTAGGAGCGATGAGGAC	30	0	0	NA	NA	NA	2	2	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|61aa|up_9|CP025990.1_3475877_3476060_-,NA|63aa|up_7|CP025990.1_3477170_3477359_-,NA|162aa|up_5|CP025990.1_3479479_3479965_+,NA|77aa|down_2|CP025990.1_3496717_3496948_-,NA|81aa|down_4|CP025990.1_3499649_3499892_-,NA|277aa|down_7|CP025990.1_3503119_3503950_+,NA|138aa|down_9|CP025990.1_3506511_3506925_-	NA|61aa|up_9|CP025990.1_3475877_3476060_-	NA	NA|272aa|up_8|CP025990.1_3476358_3477174_-	pfam14011, ESX-1_EspG, EspG family	NA|63aa|up_7|CP025990.1_3477170_3477359_-	NA	NA|195aa|up_6|CP025990.1_3477803_3478388_-	cd19540, LCL_NRPS-like, LCL-type Condensation domain of nonribosomal peptide synthetases (NRPSs) and similar domains	NA|162aa|up_5|CP025990.1_3479479_3479965_+	NA	NA|954aa|up_4|CP025990.1_3480091_3482953_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|231aa|up_3|CP025990.1_3484951_3485644_+	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|302aa|up_2|CP025990.1_3487068_3487974_-	pfam05711, TylF, Macrocin-O-methyltransferase (TylF)	NA|226aa|up_1|CP025990.1_3489019_3489697_-	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|152aa|up_0|CP025990.1_3490086_3490542_-	COG4319, COG4319, Ketosteroid isomerase homolog [Function unknown]	NA|250aa|down_0|CP025990.1_3494007_3494757_-	pfam07591, PT-HINT, Pretoxin HINT domain	NA|126aa|down_1|CP025990.1_3495427_3495805_-	pfam14206, Cys_rich_CPCC, Cysteine-rich CPCC	NA|77aa|down_2|CP025990.1_3496717_3496948_-	NA	NA|62aa|down_3|CP025990.1_3498163_3498349_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|81aa|down_4|CP025990.1_3499649_3499892_-	NA	NA|91aa|down_5|CP025990.1_3502078_3502351_+	pfam13186, SPASM, Iron-sulfur cluster-binding domain	NA|248aa|down_6|CP025990.1_3502365_3503109_+	COG3910, COG3910, Predicted ATPase [General function prediction only]	NA|277aa|down_7|CP025990.1_3503119_3503950_+	NA	NA|195aa|down_8|CP025990.1_3505886_3506471_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|138aa|down_9|CP025990.1_3506511_3506925_-	NA
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	21	3491554-3491848	16,20,16	CRT,CRISPRCasFinder,PILER-CR	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	GGTTGGAACTCCTCGTAGGAGCGATGAGGAC,GTTGGAACTCCTCGTAGGAGCGATGAGGAC,GTCCTCATCGCTCCTACGAGGAGTTCCAACC	31,30,31	0	0	NA	NA	NA:NA:NA	4,4,2	4	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|61aa|up_9|CP025990.1_3475877_3476060_-,NA|63aa|up_7|CP025990.1_3477170_3477359_-,NA|162aa|up_5|CP025990.1_3479479_3479965_+,NA|77aa|down_2|CP025990.1_3496717_3496948_-,NA|81aa|down_4|CP025990.1_3499649_3499892_-,NA|277aa|down_7|CP025990.1_3503119_3503950_+,NA|138aa|down_9|CP025990.1_3506511_3506925_-	NA|61aa|up_9|CP025990.1_3475877_3476060_-	NA	NA|272aa|up_8|CP025990.1_3476358_3477174_-	pfam14011, ESX-1_EspG, EspG family	NA|63aa|up_7|CP025990.1_3477170_3477359_-	NA	NA|195aa|up_6|CP025990.1_3477803_3478388_-	cd19540, LCL_NRPS-like, LCL-type Condensation domain of nonribosomal peptide synthetases (NRPSs) and similar domains	NA|162aa|up_5|CP025990.1_3479479_3479965_+	NA	NA|954aa|up_4|CP025990.1_3480091_3482953_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|231aa|up_3|CP025990.1_3484951_3485644_+	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|302aa|up_2|CP025990.1_3487068_3487974_-	pfam05711, TylF, Macrocin-O-methyltransferase (TylF)	NA|226aa|up_1|CP025990.1_3489019_3489697_-	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|152aa|up_0|CP025990.1_3490086_3490542_-	COG4319, COG4319, Ketosteroid isomerase homolog [Function unknown]	NA|250aa|down_0|CP025990.1_3494007_3494757_-	pfam07591, PT-HINT, Pretoxin HINT domain	NA|126aa|down_1|CP025990.1_3495427_3495805_-	pfam14206, Cys_rich_CPCC, Cysteine-rich CPCC	NA|77aa|down_2|CP025990.1_3496717_3496948_-	NA	NA|62aa|down_3|CP025990.1_3498163_3498349_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|81aa|down_4|CP025990.1_3499649_3499892_-	NA	NA|91aa|down_5|CP025990.1_3502078_3502351_+	pfam13186, SPASM, Iron-sulfur cluster-binding domain	NA|248aa|down_6|CP025990.1_3502365_3503109_+	COG3910, COG3910, Predicted ATPase [General function prediction only]	NA|277aa|down_7|CP025990.1_3503119_3503950_+	NA	NA|195aa|down_8|CP025990.1_3505886_3506471_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|138aa|down_9|CP025990.1_3506511_3506925_-	NA
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	22	3491989-3492486	21,17,17	CRISPRCasFinder,CRT,PILER-CR	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	GTTGGAACTCCTCGTAGGAGCGATGAGGAC,GTTGGAACTCCTCGTAGGAGCGATGAGGACCCG,GTCCTCATCGCTCCTACGAGGAGTTCCAAC	30,33,30	0	0	NA	NA	NA:NA:NA	7,7,5	7	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|61aa|up_9|CP025990.1_3475877_3476060_-,NA|63aa|up_7|CP025990.1_3477170_3477359_-,NA|162aa|up_5|CP025990.1_3479479_3479965_+,NA|77aa|down_2|CP025990.1_3496717_3496948_-,NA|81aa|down_4|CP025990.1_3499649_3499892_-,NA|277aa|down_7|CP025990.1_3503119_3503950_+,NA|138aa|down_9|CP025990.1_3506511_3506925_-	NA|61aa|up_9|CP025990.1_3475877_3476060_-	NA	NA|272aa|up_8|CP025990.1_3476358_3477174_-	pfam14011, ESX-1_EspG, EspG family	NA|63aa|up_7|CP025990.1_3477170_3477359_-	NA	NA|195aa|up_6|CP025990.1_3477803_3478388_-	cd19540, LCL_NRPS-like, LCL-type Condensation domain of nonribosomal peptide synthetases (NRPSs) and similar domains	NA|162aa|up_5|CP025990.1_3479479_3479965_+	NA	NA|954aa|up_4|CP025990.1_3480091_3482953_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|231aa|up_3|CP025990.1_3484951_3485644_+	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|302aa|up_2|CP025990.1_3487068_3487974_-	pfam05711, TylF, Macrocin-O-methyltransferase (TylF)	NA|226aa|up_1|CP025990.1_3489019_3489697_-	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|152aa|up_0|CP025990.1_3490086_3490542_-	COG4319, COG4319, Ketosteroid isomerase homolog [Function unknown]	NA|250aa|down_0|CP025990.1_3494007_3494757_-	pfam07591, PT-HINT, Pretoxin HINT domain	NA|126aa|down_1|CP025990.1_3495427_3495805_-	pfam14206, Cys_rich_CPCC, Cysteine-rich CPCC	NA|77aa|down_2|CP025990.1_3496717_3496948_-	NA	NA|62aa|down_3|CP025990.1_3498163_3498349_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|81aa|down_4|CP025990.1_3499649_3499892_-	NA	NA|91aa|down_5|CP025990.1_3502078_3502351_+	pfam13186, SPASM, Iron-sulfur cluster-binding domain	NA|248aa|down_6|CP025990.1_3502365_3503109_+	COG3910, COG3910, Predicted ATPase [General function prediction only]	NA|277aa|down_7|CP025990.1_3503119_3503950_+	NA	NA|195aa|down_8|CP025990.1_3505886_3506471_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|138aa|down_9|CP025990.1_3506511_3506925_-	NA
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	23	3492711-3492934	22	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	GTTGGAACTCCTCGTAGGAGCGATGAGGAC	30	0	0	NA	NA	NA	3	3	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|61aa|up_9|CP025990.1_3475877_3476060_-,NA|63aa|up_7|CP025990.1_3477170_3477359_-,NA|162aa|up_5|CP025990.1_3479479_3479965_+,NA|77aa|down_2|CP025990.1_3496717_3496948_-,NA|81aa|down_4|CP025990.1_3499649_3499892_-,NA|277aa|down_7|CP025990.1_3503119_3503950_+,NA|138aa|down_9|CP025990.1_3506511_3506925_-	NA|61aa|up_9|CP025990.1_3475877_3476060_-	NA	NA|272aa|up_8|CP025990.1_3476358_3477174_-	pfam14011, ESX-1_EspG, EspG family	NA|63aa|up_7|CP025990.1_3477170_3477359_-	NA	NA|195aa|up_6|CP025990.1_3477803_3478388_-	cd19540, LCL_NRPS-like, LCL-type Condensation domain of nonribosomal peptide synthetases (NRPSs) and similar domains	NA|162aa|up_5|CP025990.1_3479479_3479965_+	NA	NA|954aa|up_4|CP025990.1_3480091_3482953_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|231aa|up_3|CP025990.1_3484951_3485644_+	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|302aa|up_2|CP025990.1_3487068_3487974_-	pfam05711, TylF, Macrocin-O-methyltransferase (TylF)	NA|226aa|up_1|CP025990.1_3489019_3489697_-	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|152aa|up_0|CP025990.1_3490086_3490542_-	COG4319, COG4319, Ketosteroid isomerase homolog [Function unknown]	NA|250aa|down_0|CP025990.1_3494007_3494757_-	pfam07591, PT-HINT, Pretoxin HINT domain	NA|126aa|down_1|CP025990.1_3495427_3495805_-	pfam14206, Cys_rich_CPCC, Cysteine-rich CPCC	NA|77aa|down_2|CP025990.1_3496717_3496948_-	NA	NA|62aa|down_3|CP025990.1_3498163_3498349_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|81aa|down_4|CP025990.1_3499649_3499892_-	NA	NA|91aa|down_5|CP025990.1_3502078_3502351_+	pfam13186, SPASM, Iron-sulfur cluster-binding domain	NA|248aa|down_6|CP025990.1_3502365_3503109_+	COG3910, COG3910, Predicted ATPase [General function prediction only]	NA|277aa|down_7|CP025990.1_3503119_3503950_+	NA	NA|195aa|down_8|CP025990.1_3505886_3506471_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|138aa|down_9|CP025990.1_3506511_3506925_-	NA
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	24	3572166-3572439	18,23,18	PILER-CR,CRISPRCasFinder,CRT	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	CGGCTCACCCCCGCTTGCGCGGGGCTTTC,GAAAGCCCCGCGCAAGCGGGGGTGAGCCGG,GAAAGCCCCGCGCAAGCGGGGGTGA	29,30,25	0	0	NA	NA	NA:NA:NA	4,4,4	4	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|327aa|up_1|CP025990.1_3569776_3570757_+,NA|76aa|up_0|CP025990.1_3570970_3571198_-,NA|213aa|down_1|CP025990.1_3574019_3574658_-,NA|385aa|down_5|CP025990.1_3577461_3578616_+,NA|105aa|down_8|CP025990.1_3582054_3582369_+,NA|105aa|down_9|CP025990.1_3582686_3583001_+	NA|391aa|up_9|CP025990.1_3558496_3559669_-	cd09216, GH64-LPHase-like, glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like	NA|208aa|up_8|CP025990.1_3560293_3560917_+	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|360aa|up_7|CP025990.1_3561128_3562208_+	cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, similar to Escherichia coli YihR	NA|285aa|up_6|CP025990.1_3562307_3563162_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|255aa|up_5|CP025990.1_3563191_3563956_-	TIGR03856, F420_MSMEG_2906, probable F420-dependent oxidoreductase, MSMEG_2906 family	NA|343aa|up_4|CP025990.1_3564161_3565190_-	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|863aa|up_3|CP025990.1_3565365_3567954_-	cd06244, M14-like, Peptidase M14-like domain; uncharacterized subgroup	NA|419aa|up_2|CP025990.1_3568209_3569466_-	cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins	NA|327aa|up_1|CP025990.1_3569776_3570757_+	NA	NA|76aa|up_0|CP025990.1_3570970_3571198_-	NA	NA|407aa|down_0|CP025990.1_3572758_3573979_-	cd08659, M20_ArgE_DapE-like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like	NA|213aa|down_1|CP025990.1_3574019_3574658_-	NA	NA|152aa|down_2|CP025990.1_3574845_3575301_-	COG4933, COG4933, Uncharacterized conserved protein [Function unknown]	NA|276aa|down_3|CP025990.1_3575957_3576785_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|252aa|down_4|CP025990.1_3576781_3577537_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|385aa|down_5|CP025990.1_3577461_3578616_+	NA	NA|126aa|down_6|CP025990.1_3578635_3579013_+	pfam02675, AdoMet_dc, S-adenosylmethionine decarboxylase	NA|105aa|down_7|CP025990.1_3581656_3581971_+	pfam00198, 2-oxoacid_dh, 2-oxoacid dehydrogenases acyltransferase (catalytic domain)	NA|105aa|down_8|CP025990.1_3582054_3582369_+	NA	NA|105aa|down_9|CP025990.1_3582686_3583001_+	NA
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	25	3609263-3609960	19,24,19	PILER-CR,CRISPRCasFinder,CRT	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	GGAACAGCCCCGCGTGCGCGGGGAGGAC,GGAACAGCCCCGCGTGCGCGGGGACGAC,GGAACAGCCCCGCGTGCGCGGGGAGGAC	28,28,28	0	0	NA	NA	NA:NA:NA	10,11,11	11	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|411aa|up_1|CP025990.1_3607036_3608269_-,NA|139aa|up_0|CP025990.1_3608278_3608695_-,NA|119aa|down_0|CP025990.1_3610825_3611182_+,NA|61aa|down_3|CP025990.1_3612789_3612972_+,NA|166aa|down_7|CP025990.1_3623362_3623860_+	NA|341aa|up_9|CP025990.1_3593471_3594494_-	TIGR04543, 2-ketoarginine_methyltransferase, 2-ketoarginine methyltransferase	NA|376aa|up_8|CP025990.1_3594609_3595737_-	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|76aa|up_7|CP025990.1_3596980_3597208_+	pfam03621, MbtH, MbtH-like protein	NA|446aa|up_6|CP025990.1_3597467_3598805_+	PRK06062, PRK06062, hypothetical protein; Provisional	NA|272aa|up_5|CP025990.1_3598896_3599712_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|107aa|up_4|CP025990.1_3603584_3603905_+	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|283aa|up_3|CP025990.1_3605371_3606220_+	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC	NA|204aa|up_2|CP025990.1_3606271_3606883_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|411aa|up_1|CP025990.1_3607036_3608269_-	NA	NA|139aa|up_0|CP025990.1_3608278_3608695_-	NA	NA|119aa|down_0|CP025990.1_3610825_3611182_+	NA	NA|185aa|down_1|CP025990.1_3611223_3611778_+	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|down_2|CP025990.1_3612116_3612671_+	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|61aa|down_3|CP025990.1_3612789_3612972_+	NA	NA|1159aa|down_4|CP025990.1_3616284_3619761_-	cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1	NA|74aa|down_5|CP025990.1_3620352_3620574_-	pfam12277, DUF3618, Protein of unknown function (DUF3618)	NA|300aa|down_6|CP025990.1_3622312_3623212_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|166aa|down_7|CP025990.1_3623362_3623860_+	NA	NA|322aa|down_8|CP025990.1_3623938_3624904_-	pfam04909, Amidohydro_2, Amidohydrolase	NA|244aa|down_9|CP025990.1_3625225_3625957_-	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	26	3610277-3610789	20,20,25	CRT,PILER-CR,CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	GGAACAGCCCCGCGTGCGCGGGGNNA,GGAACAGCCCCGCGTGCGCGGGGAGGAC,GGAACAGCCCCGCGTGCGCGGGGACGAC	26,28,28	0	0	NA	NA	NA:NA:NA	8,7,7	8	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|411aa|up_1|CP025990.1_3607036_3608269_-,NA|139aa|up_0|CP025990.1_3608278_3608695_-,NA|119aa|down_0|CP025990.1_3610825_3611182_+,NA|61aa|down_3|CP025990.1_3612789_3612972_+,NA|166aa|down_7|CP025990.1_3623362_3623860_+	NA|341aa|up_9|CP025990.1_3593471_3594494_-	TIGR04543, 2-ketoarginine_methyltransferase, 2-ketoarginine methyltransferase	NA|376aa|up_8|CP025990.1_3594609_3595737_-	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|76aa|up_7|CP025990.1_3596980_3597208_+	pfam03621, MbtH, MbtH-like protein	NA|446aa|up_6|CP025990.1_3597467_3598805_+	PRK06062, PRK06062, hypothetical protein; Provisional	NA|272aa|up_5|CP025990.1_3598896_3599712_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|107aa|up_4|CP025990.1_3603584_3603905_+	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|283aa|up_3|CP025990.1_3605371_3606220_+	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC	NA|204aa|up_2|CP025990.1_3606271_3606883_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|411aa|up_1|CP025990.1_3607036_3608269_-	NA	NA|139aa|up_0|CP025990.1_3608278_3608695_-	NA	NA|119aa|down_0|CP025990.1_3610825_3611182_+	NA	NA|185aa|down_1|CP025990.1_3611223_3611778_+	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|down_2|CP025990.1_3612116_3612671_+	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|61aa|down_3|CP025990.1_3612789_3612972_+	NA	NA|1159aa|down_4|CP025990.1_3616284_3619761_-	cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1	NA|74aa|down_5|CP025990.1_3620352_3620574_-	pfam12277, DUF3618, Protein of unknown function (DUF3618)	NA|300aa|down_6|CP025990.1_3622312_3623212_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|166aa|down_7|CP025990.1_3623362_3623860_+	NA	NA|322aa|down_8|CP025990.1_3623938_3624904_-	pfam04909, Amidohydro_2, Amidohydrolase	NA|244aa|down_9|CP025990.1_3625225_3625957_-	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	28	4214408-4214679	27,21,21	CRISPRCasFinder,CRT,PILER-CR	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	CGGCTCACCCCCGCTTGCGCGGGGCTTAC,CGGCTCACCCCCGCTTGCGCGGGGCTTAC,CGGCTCACCCCCGCTTGCGCGGGGCTTAC	29,29,29	0	0	NA	NA	NA:NA:NA	4,4,3	4	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|66aa|up_9|CP025990.1_4202486_4202684_+,NA|122aa|down_7|CP025990.1_4222255_4222621_+	NA|66aa|up_9|CP025990.1_4202486_4202684_+	NA	NA|250aa|up_8|CP025990.1_4202765_4203515_+	COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|257aa|up_7|CP025990.1_4203600_4204371_+	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|119aa|up_6|CP025990.1_4206488_4206845_+	pfam03779, SPW, SPW repeat	NA|209aa|up_5|CP025990.1_4207008_4207635_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|801aa|up_4|CP025990.1_4207886_4210289_+	pfam01804, Penicil_amidase, Penicillin amidase	NA|151aa|up_3|CP025990.1_4210516_4210969_-	TIGR03081, Methylmalonyl-CoA_epimerase_mitochondrial, methylmalonyl-CoA epimerase	NA|314aa|up_2|CP025990.1_4210927_4211869_+	pfam06267, DUF1028, Family of unknown function (DUF1028)	NA|402aa|up_1|CP025990.1_4212107_4213313_+	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|323aa|up_0|CP025990.1_4213309_4214278_+	COG1703, ArgK, Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]	NA|512aa|down_0|CP025990.1_4214862_4216398_-	PRK03348, PRK03348, DNA polymerase IV; Provisional	NA|332aa|down_1|CP025990.1_4216588_4217584_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|115aa|down_2|CP025990.1_4217992_4218337_+	pfam12823, DUF3817, Domain of unknown function (DUF3817)	NA|174aa|down_3|CP025990.1_4218343_4218865_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|106aa|down_4|CP025990.1_4218985_4219303_+	pfam01910, Thiamine_BP, Thiamine-binding protein	NA|580aa|down_5|CP025990.1_4219413_4221153_+	cd03680, MM_CoA_mutase_ICM_like, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, isobutyryl-CoA mutase (ICM)-like subfamily; contains archaeal and bacterial proteins similar to the large subunit of Streptomyces cinnamonensis coenzyme B12-dependent ICM	NA|316aa|down_6|CP025990.1_4221270_4222218_+	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]	NA|122aa|down_7|CP025990.1_4222255_4222621_+	NA	NA|439aa|down_8|CP025990.1_4222621_4223938_-	COG2321, COG2321, Predicted metalloprotease [General function prediction only]	NA|212aa|down_9|CP025990.1_4224854_4225490_+	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only]
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	29	4677437-4677657	22,28,22	PILER-CR,CRISPRCasFinder,CRT	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	GGAACAGCCCCGCGTGCGCGGGGACGACACGTTCGG,GTCGTCCCCGCGCACGCGGGGCTGTTCC,GTCGTCCCCGCGCACGCGGGGCTGTTCC	36,28,28	0	0	NA	NA	NA:NA:NA	2,3,3	3	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|150aa|up_8|CP025990.1_4665640_4666090_+,NA|305aa|up_5|CP025990.1_4668271_4669186_-,NA	NA|258aa|up_9|CP025990.1_4664870_4665644_+	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|150aa|up_8|CP025990.1_4665640_4666090_+	NA	NA|202aa|up_7|CP025990.1_4666096_4666702_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|412aa|up_6|CP025990.1_4666993_4668229_+	COG3214, COG3214, Uncharacterized protein conserved in bacteria [Function unknown]	NA|305aa|up_5|CP025990.1_4668271_4669186_-	NA	NA|194aa|up_4|CP025990.1_4669284_4669866_-	pfam05534, HicB, HicB family	NA|251aa|up_3|CP025990.1_4670109_4670862_+	PRK00847, thyX, FAD-dependent thymidylate synthase; Reviewed	NA|315aa|up_2|CP025990.1_4671403_4672348_+	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|545aa|up_1|CP025990.1_4672449_4674084_+	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	NA|959aa|up_0|CP025990.1_4674232_4677109_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|256aa|down_0|CP025990.1_4677726_4678494_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|780aa|down_1|CP025990.1_4678908_4681248_+	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|549aa|down_2|CP025990.1_4681531_4683178_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|369aa|down_3|CP025990.1_4683337_4684444_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|1131aa|down_4|CP025990.1_4688465_4691858_-	pfam09992, NAGPA, Phosphodiester glycosidase	NA|177aa|down_5|CP025990.1_4692110_4692641_-	pfam09056, Phospholip_A2_3, Prokaryotic phospholipase A2	NA|194aa|down_6|CP025990.1_4693360_4693942_-	PRK07922, PRK07922, amino-acid N-acetyltransferase	NA|482aa|down_7|CP025990.1_4694053_4695499_+	TIGR01125, Ribosomal_protein_S12_methylthiotransferase_RimO, ribosomal protein S12 methylthiotransferase RimO	NA|227aa|down_8|CP025990.1_4695495_4696176_+	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|176aa|down_9|CP025990.1_4696172_4696700_+	PRK00549, PRK00549, competence damage-inducible protein A; Provisional
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	30	4939768-4940057	29,23,23	CRISPRCasFinder,CRT,PILER-CR	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	GTTGGAACTCCTCGTAGGAGCGATGAGGAC,GTTGGAACTCCTCGTAGGAGCGATGAGGAC,GTCCTCATCGCTCCTACGAGGAGTTCCAAC	30,30,30	0	0	NA	NA	NA:NA:NA	4,4,3	4	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|116aa|up_9|CP025990.1_4926326_4926674_+,NA|122aa|up_8|CP025990.1_4926673_4927039_+,NA|178aa|up_7|CP025990.1_4927026_4927560_+,NA|102aa|down_0|CP025990.1_4940484_4940790_-,NA|87aa|down_3|CP025990.1_4944376_4944637_+,NA|111aa|down_7|CP025990.1_4945981_4946314_+	NA|116aa|up_9|CP025990.1_4926326_4926674_+	NA	NA|122aa|up_8|CP025990.1_4926673_4927039_+	NA	NA|178aa|up_7|CP025990.1_4927026_4927560_+	NA	NA|778aa|up_6|CP025990.1_4927751_4930085_-	cd10318, RGL11, Rhamnogalacturonan lyase of the polysaccharide lyase family 11	NA|453aa|up_5|CP025990.1_4930783_4932142_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|775aa|up_4|CP025990.1_4932289_4934614_-	PRK10658, PRK10658, putative alpha-glucosidase; Provisional	NA|463aa|up_3|CP025990.1_4934707_4936096_-	TIGR03356, BGL, beta-galactosidase	NA|337aa|up_2|CP025990.1_4936231_4937242_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|152aa|up_1|CP025990.1_4938311_4938767_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|173aa|up_0|CP025990.1_4938858_4939377_-	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators	NA|102aa|down_0|CP025990.1_4940484_4940790_-	NA	NA|427aa|down_1|CP025990.1_4941122_4942403_-	pfam00285, Citrate_synt, Citrate synthase, C-terminal domain	NA|391aa|down_2|CP025990.1_4942493_4943666_+	cd06109, BsCS-I_like, Bacillus subtilis (Bs) citrate synthase CS-I_like	NA|87aa|down_3|CP025990.1_4944376_4944637_+	NA	NA|173aa|down_4|CP025990.1_4944665_4945184_+	pfam14428, SCP1201-deam, SCP1	NA|165aa|down_5|CP025990.1_4945132_4945627_+	pfam14430, Imm1, Immunity protein Imm1	NA|146aa|down_6|CP025990.1_4945559_4945997_+	pfam14428, SCP1201-deam, SCP1	NA|111aa|down_7|CP025990.1_4945981_4946314_+	NA	NA|1450aa|down_8|CP025990.1_4946681_4951031_+	NF033442, BREX_PglW, BREX system serine/threonine kinase PglW	NA|1207aa|down_9|CP025990.1_4951053_4954674_+	NF033451, BREX_2_MTaseX, BREX-2 system adenine-specific DNA-methyltransferase PglX
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	31	4968613-4968886	24,30,24	PILER-CR,CRISPRCasFinder,CRT	no	cas3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	CGGCTCACCCCCGCTTGCGCGGGGCTTTC,GAAAGCCCCGCGCAAGCGGGGGTGAGCCG,GAAAGCCCCGCGCAAGCGGGGGTGAGCCG	29,29,29	0	0	NA	NA	NA:NA:NA	3,4,4	4	Unclear	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|111aa|up_9|CP025990.1_4945981_4946314_+,NA|63aa|up_2|CP025990.1_4965807_4965996_+,NA|140aa|down_8|CP025990.1_4978010_4978430_+	NA|111aa|up_9|CP025990.1_4945981_4946314_+	NA	NA|1450aa|up_8|CP025990.1_4946681_4951031_+	NF033442, BREX_PglW, BREX system serine/threonine kinase PglW	NA|1207aa|up_7|CP025990.1_4951053_4954674_+	NF033451, BREX_2_MTaseX, BREX-2 system adenine-specific DNA-methyltransferase PglX	NA|1276aa|up_6|CP025990.1_4954670_4958498_+	NF033441, BREX_BrxC, BREX system P-loop protein BrxC	NA|893aa|up_5|CP025990.1_4958494_4961173_+	NF033446, BREX_PglZ_2, BREX-2 system phosphatase PglZ	NA|440aa|up_4|CP025990.1_4961169_4962489_+	NF033438, BREX_BrxD, BREX system ATP-binding protein BrxD	cas3|701aa|up_3|CP025990.1_4962485_4964588_+	COG1201, Lhr, Lhr-like helicases [General function prediction only]	NA|63aa|up_2|CP025990.1_4965807_4965996_+	NA	NA|151aa|up_1|CP025990.1_4966204_4966657_-	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|180aa|up_0|CP025990.1_4966692_4967232_+	smart00823, PKS_PP, Phosphopantetheine attachment site	NA|153aa|down_0|CP025990.1_4969814_4970273_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|down_1|CP025990.1_4970616_4971171_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|down_2|CP025990.1_4971514_4972069_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|down_3|CP025990.1_4972412_4972967_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|68aa|down_4|CP025990.1_4973464_4973668_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|65aa|down_5|CP025990.1_4975296_4975491_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|64aa|down_6|CP025990.1_4975844_4976036_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|291aa|down_7|CP025990.1_4975998_4976871_-	pfam13560, HTH_31, Helix-turn-helix domain	NA|140aa|down_8|CP025990.1_4978010_4978430_+	NA	NA|35aa|down_9|CP025990.1_4978874_4978979_-	pfam14430, Imm1, Immunity protein Imm1
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	32	4969102-4969496	25,31,25	PILER-CR,CRISPRCasFinder,CRT	no	cas3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	CGGCTCACCCCCGCTTGCGCGGGGCTTAC,GAAAGCCCCGCGCAAGCGGGGGTGAGCCG,GTAAGCCCCGCGCAAGCGGGGGTGAGCCG	29,29,29	0	0	NA	NA	NA:NA:NA	6,6,6	6	Unclear	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|111aa|up_9|CP025990.1_4945981_4946314_+,NA|63aa|up_2|CP025990.1_4965807_4965996_+,NA|140aa|down_8|CP025990.1_4978010_4978430_+	NA|111aa|up_9|CP025990.1_4945981_4946314_+	NA	NA|1450aa|up_8|CP025990.1_4946681_4951031_+	NF033442, BREX_PglW, BREX system serine/threonine kinase PglW	NA|1207aa|up_7|CP025990.1_4951053_4954674_+	NF033451, BREX_2_MTaseX, BREX-2 system adenine-specific DNA-methyltransferase PglX	NA|1276aa|up_6|CP025990.1_4954670_4958498_+	NF033441, BREX_BrxC, BREX system P-loop protein BrxC	NA|893aa|up_5|CP025990.1_4958494_4961173_+	NF033446, BREX_PglZ_2, BREX-2 system phosphatase PglZ	NA|440aa|up_4|CP025990.1_4961169_4962489_+	NF033438, BREX_BrxD, BREX system ATP-binding protein BrxD	cas3|701aa|up_3|CP025990.1_4962485_4964588_+	COG1201, Lhr, Lhr-like helicases [General function prediction only]	NA|63aa|up_2|CP025990.1_4965807_4965996_+	NA	NA|151aa|up_1|CP025990.1_4966204_4966657_-	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|180aa|up_0|CP025990.1_4966692_4967232_+	smart00823, PKS_PP, Phosphopantetheine attachment site	NA|153aa|down_0|CP025990.1_4969814_4970273_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|down_1|CP025990.1_4970616_4971171_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|down_2|CP025990.1_4971514_4972069_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|down_3|CP025990.1_4972412_4972967_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|68aa|down_4|CP025990.1_4973464_4973668_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|65aa|down_5|CP025990.1_4975296_4975491_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|64aa|down_6|CP025990.1_4975844_4976036_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|291aa|down_7|CP025990.1_4975998_4976871_-	pfam13560, HTH_31, Helix-turn-helix domain	NA|140aa|down_8|CP025990.1_4978010_4978430_+	NA	NA|35aa|down_9|CP025990.1_4978874_4978979_-	pfam14430, Imm1, Immunity protein Imm1
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	33	4974042-4974498	32,26,26	CRISPRCasFinder,CRT,PILER-CR	no	cas3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	GTCGTCCCCGCGCACGCGGGGCTGTTCC,GTCGTCCCCGCGCACGCGGGGCTGTTCC,GGGAACAGCCCCGCGTGCGCGGGGACGACTCCCGCT	28,28,36	0	0	NA	NA	NA:NA:NA	7,7,2	7	Unclear	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|63aa|up_7|CP025990.1_4965807_4965996_+,NA|140aa|down_3|CP025990.1_4978010_4978430_+,NA|60aa|down_8|CP025990.1_4985698_4985878_+	NA|440aa|up_9|CP025990.1_4961169_4962489_+	NF033438, BREX_BrxD, BREX system ATP-binding protein BrxD	cas3|701aa|up_8|CP025990.1_4962485_4964588_+	COG1201, Lhr, Lhr-like helicases [General function prediction only]	NA|63aa|up_7|CP025990.1_4965807_4965996_+	NA	NA|151aa|up_6|CP025990.1_4966204_4966657_-	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|180aa|up_5|CP025990.1_4966692_4967232_+	smart00823, PKS_PP, Phosphopantetheine attachment site	NA|153aa|up_4|CP025990.1_4969814_4970273_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|up_3|CP025990.1_4970616_4971171_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|up_2|CP025990.1_4971514_4972069_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|up_1|CP025990.1_4972412_4972967_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|68aa|up_0|CP025990.1_4973464_4973668_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|65aa|down_0|CP025990.1_4975296_4975491_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|64aa|down_1|CP025990.1_4975844_4976036_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|291aa|down_2|CP025990.1_4975998_4976871_-	pfam13560, HTH_31, Helix-turn-helix domain	NA|140aa|down_3|CP025990.1_4978010_4978430_+	NA	NA|35aa|down_4|CP025990.1_4978874_4978979_-	pfam14430, Imm1, Immunity protein Imm1	NA|610aa|down_5|CP025990.1_4980236_4982066_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|578aa|down_6|CP025990.1_4982062_4983796_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|210aa|down_7|CP025990.1_4984951_4985581_-	cd17920, DEXHc_RecQ, DEXH-box helicase domain of RecQ family proteins	NA|60aa|down_8|CP025990.1_4985698_4985878_+	NA	NA|344aa|down_9|CP025990.1_4986061_4987093_+	PRK07877, PRK07877, Rv1355c family protein
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	34	4978696-4978788	33	CRISPRCasFinder	no	cas3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	CGGCTCACCCCCGCTCGCGCGGGGCAGAC	29	0	0	NA	NA	NA	1	1	Unclear	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|140aa|up_0|CP025990.1_4978010_4978430_+,NA|60aa|down_4|CP025990.1_4985698_4985878_+,NA|142aa|down_6|CP025990.1_4987281_4987707_+,NA|68aa|down_7|CP025990.1_4989817_4990021_-,NA|69aa|down_9|CP025990.1_4991177_4991384_+	NA|180aa|up_9|CP025990.1_4966692_4967232_+	smart00823, PKS_PP, Phosphopantetheine attachment site	NA|153aa|up_8|CP025990.1_4969814_4970273_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|up_7|CP025990.1_4970616_4971171_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|up_6|CP025990.1_4971514_4972069_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|up_5|CP025990.1_4972412_4972967_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|68aa|up_4|CP025990.1_4973464_4973668_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|65aa|up_3|CP025990.1_4975296_4975491_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|64aa|up_2|CP025990.1_4975844_4976036_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|291aa|up_1|CP025990.1_4975998_4976871_-	pfam13560, HTH_31, Helix-turn-helix domain	NA|140aa|up_0|CP025990.1_4978010_4978430_+	NA	NA|35aa|down_0|CP025990.1_4978874_4978979_-	pfam14430, Imm1, Immunity protein Imm1	NA|610aa|down_1|CP025990.1_4980236_4982066_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|578aa|down_2|CP025990.1_4982062_4983796_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|210aa|down_3|CP025990.1_4984951_4985581_-	cd17920, DEXHc_RecQ, DEXH-box helicase domain of RecQ family proteins	NA|60aa|down_4|CP025990.1_4985698_4985878_+	NA	NA|344aa|down_5|CP025990.1_4986061_4987093_+	PRK07877, PRK07877, Rv1355c family protein	NA|142aa|down_6|CP025990.1_4987281_4987707_+	NA	NA|68aa|down_7|CP025990.1_4989817_4990021_-	NA	NA|76aa|down_8|CP025990.1_4990457_4990685_-	PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional	NA|69aa|down_9|CP025990.1_4991177_4991384_+	NA
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	35	4978992-4979264	34,27,27	CRISPRCasFinder,CRT,PILER-CR	no	cas3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	CGGCTCACCCCCGCTCGCGCGGGGCAGAC,CGGCTCACCCCCGCTCGCGCGGGGCAGAC,CGGCTCACCCCCGCTCGCGCGGGGCAGAC	29,29,29	0	0	NA	NA	NA:NA:NA	4,4,2	4	Unclear	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|140aa|up_1|CP025990.1_4978010_4978430_+,NA|60aa|down_3|CP025990.1_4985698_4985878_+,NA|142aa|down_5|CP025990.1_4987281_4987707_+,NA|68aa|down_6|CP025990.1_4989817_4990021_-,NA|69aa|down_8|CP025990.1_4991177_4991384_+	NA|153aa|up_9|CP025990.1_4969814_4970273_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|up_8|CP025990.1_4970616_4971171_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|up_7|CP025990.1_4971514_4972069_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|185aa|up_6|CP025990.1_4972412_4972967_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|68aa|up_5|CP025990.1_4973464_4973668_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|65aa|up_4|CP025990.1_4975296_4975491_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|64aa|up_3|CP025990.1_4975844_4976036_-	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|291aa|up_2|CP025990.1_4975998_4976871_-	pfam13560, HTH_31, Helix-turn-helix domain	NA|140aa|up_1|CP025990.1_4978010_4978430_+	NA	NA|35aa|up_0|CP025990.1_4978874_4978979_-	pfam14430, Imm1, Immunity protein Imm1	NA|610aa|down_0|CP025990.1_4980236_4982066_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|578aa|down_1|CP025990.1_4982062_4983796_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|210aa|down_2|CP025990.1_4984951_4985581_-	cd17920, DEXHc_RecQ, DEXH-box helicase domain of RecQ family proteins	NA|60aa|down_3|CP025990.1_4985698_4985878_+	NA	NA|344aa|down_4|CP025990.1_4986061_4987093_+	PRK07877, PRK07877, Rv1355c family protein	NA|142aa|down_5|CP025990.1_4987281_4987707_+	NA	NA|68aa|down_6|CP025990.1_4989817_4990021_-	NA	NA|76aa|down_7|CP025990.1_4990457_4990685_-	PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional	NA|69aa|down_8|CP025990.1_4991177_4991384_+	NA	NA|135aa|down_9|CP025990.1_4991292_4991697_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	36	5001117-5001572	28,35,28	PILER-CR,CRISPRCasFinder,CRT	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	GGAACAGCCCCGCGTGCGCGGGGAGGAC,GGAACAGCCCCGCGTGCGCGGGGAGGAC,GGAACAGCCCCGCGTGCGCGGGGAGGAC	28,28,28	0	0	NA	NA	NA:NA:NA	7,7,7	7	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|69aa|up_9|CP025990.1_4991177_4991384_+,NA|100aa|up_0|CP025990.1_5000706_5001006_-,NA|85aa|down_3|CP025990.1_5006183_5006438_+,NA|375aa|down_8|CP025990.1_5012372_5013497_+,NA|208aa|down_9|CP025990.1_5013687_5014311_-	NA|69aa|up_9|CP025990.1_4991177_4991384_+	NA	NA|135aa|up_8|CP025990.1_4991292_4991697_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|99aa|up_7|CP025990.1_4993127_4993424_+	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|121aa|up_6|CP025990.1_4993686_4994049_-	pfam03720, UDPG_MGDP_dh_C, UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain	NA|270aa|up_5|CP025990.1_4994615_4995425_-	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|431aa|up_4|CP025990.1_4995985_4997278_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|337aa|up_3|CP025990.1_4997274_4998285_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|368aa|up_2|CP025990.1_4998281_4999385_-	TIGR03182, Pyruvate_dehydrogenase_E1_component_subunit_alpha, pyruvate dehydrogenase E1 component, alpha subunit	NA|213aa|up_1|CP025990.1_4999522_5000161_+	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region	NA|100aa|up_0|CP025990.1_5000706_5001006_-	NA	NA|284aa|down_0|CP025990.1_5003539_5004391_+	pfam13560, HTH_31, Helix-turn-helix domain	NA|64aa|down_1|CP025990.1_5004400_5004592_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|226aa|down_2|CP025990.1_5005067_5005745_-	cd07544, P-type_ATPase_HM, P-type heavy metal-transporting ATPase; uncharacterized subfamily	NA|85aa|down_3|CP025990.1_5006183_5006438_+	NA	NA|449aa|down_4|CP025990.1_5006753_5008100_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|187aa|down_5|CP025990.1_5008222_5008783_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|788aa|down_6|CP025990.1_5008855_5011219_-	PRK12326, PRK12326, preprotein translocase subunit SecA; Reviewed	NA|178aa|down_7|CP025990.1_5011636_5012170_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|375aa|down_8|CP025990.1_5012372_5013497_+	NA	NA|208aa|down_9|CP025990.1_5013687_5014311_-	NA
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	38	5443903-5445338	30,36,29	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Type I-C,Type I-U, Type I-U?	GTTG-------CACCGGGCCTCCGGGCCCGGTGAGGATCGCAAC,GTTGCACCGGGCCTCCGGGCCCGGTGAGGATCGCAAC,GTTGCACCGGGCCTCCGGGCCCGGTGAGGATCGCAAC	44,37,37	0	0	NA	NA	NA:I-C,III-B:I-C,III-B	19,19,19	19	TypeI-C,TypeI-U,TypeI-U?	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA,NA|72aa|down_0|CP025990.1_5445478_5445694_-,NA|75aa|down_1|CP025990.1_5445690_5445915_-,NA|136aa|down_2|CP025990.1_5446054_5446462_-	NA|981aa|up_9|CP025990.1_5430474_5433417_-	cd09004, GH43_bXyl-like, Glycosyl hydrolase family 43 protein such as Bacteroides thetaiotaomicron VPI-5482 alpha-L-arabinofuranosidases (BT3675;BT_3675) and (BT3662;BT_3662); includes mostly xylanases	NA|329aa|up_8|CP025990.1_5433934_5434921_+	cd01574, PBP1_LacI, ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators	NA|186aa|up_7|CP025990.1_5434999_5435557_-	TIGR03086, TIGR03086, TIGR03086 family protein	cas3|744aa|up_6|CP025990.1_5436044_5438276_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|229aa|up_5|CP025990.1_5438269_5438956_+	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|592aa|up_4|CP025990.1_5438955_5440731_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|300aa|up_3|CP025990.1_5440788_5441688_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|219aa|up_2|CP025990.1_5441692_5442349_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas1|339aa|up_1|CP025990.1_5442341_5443358_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|CP025990.1_5443361_5443652_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|72aa|down_0|CP025990.1_5445478_5445694_-	NA	NA|75aa|down_1|CP025990.1_5445690_5445915_-	NA	NA|136aa|down_2|CP025990.1_5446054_5446462_-	NA	NA|162aa|down_3|CP025990.1_5446458_5446944_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|298aa|down_4|CP025990.1_5447046_5447940_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|63aa|down_5|CP025990.1_5447939_5448128_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|64aa|down_6|CP025990.1_5448357_5448549_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|429aa|down_7|CP025990.1_5448919_5450206_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|263aa|down_8|CP025990.1_5450539_5451328_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|1198aa|down_9|CP025990.1_5451641_5455235_-	COG3903, COG3903, Predicted ATPase [General function prediction only]
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	39	5574061-5574637	31,37,30	PILER-CR,CRISPRCasFinder,CRT	no	WYL	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	CGGCTCACCCCCGCTCGCGCGGGGCAGAC,CGGCTCACCCCCGCTCGCGCGGGGCAGAC,CGGCTCACCCCCGCTCGCGCGGGGCAGAC	29,29,29	1	1	5574212-5574243	CP025990.1_4979502-4979533	NA:NA:NA	9,9,9	9	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|136aa|up_9|CP025990.1_5563920_5564328_-,NA|73aa|up_5|CP025990.1_5567975_5568194_-,NA|111aa|up_4|CP025990.1_5568398_5568731_-,NA|171aa|down_6|CP025990.1_5581129_5581642_+	NA|136aa|up_9|CP025990.1_5563920_5564328_-	NA	NA|272aa|up_8|CP025990.1_5564567_5565383_+	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family	NA|489aa|up_7|CP025990.1_5565601_5567068_-	PRK14995, PRK14995, SmvA family efflux MFS transporter	NA|131aa|up_6|CP025990.1_5567282_5567675_+	cd01282, HTH_MerR-like_sg3, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily	NA|73aa|up_5|CP025990.1_5567975_5568194_-	NA	NA|111aa|up_4|CP025990.1_5568398_5568731_-	NA	NA|238aa|up_3|CP025990.1_5568994_5569708_+	cd19365, TenA_C-like, uncharacterized TenA_C proteins	NA|255aa|up_2|CP025990.1_5569955_5570720_+	pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase	NA|336aa|up_1|CP025990.1_5571215_5572223_-	PRK09393, ftrA, transcriptional activator FtrA; Provisional	NA|404aa|up_0|CP025990.1_5572692_5573904_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|258aa|down_0|CP025990.1_5574861_5575635_-	COG0212, COG0212, 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]	NA|171aa|down_1|CP025990.1_5576721_5577234_-	pfam13521, AAA_28, AAA domain	NA|134aa|down_2|CP025990.1_5577477_5577879_-	cd01282, HTH_MerR-like_sg3, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily	NA|171aa|down_3|CP025990.1_5577912_5578425_-	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase	NA|202aa|down_4|CP025990.1_5578970_5579576_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|383aa|down_5|CP025990.1_5579572_5580721_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|171aa|down_6|CP025990.1_5581129_5581642_+	NA	NA|826aa|down_7|CP025990.1_5581804_5584282_-	PRK05561, PRK05561, DNA topoisomerase 4 subunit A	NA|688aa|down_8|CP025990.1_5584361_5586425_-	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed	NA|252aa|down_9|CP025990.1_5586775_5587531_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	40	5592070-5592343	32,38,31	PILER-CR,CRISPRCasFinder,CRT	no	WYL	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	GGAACAGCCCCGCGTGCGCGGGGACGAC,GTCGTCCCCGCGCACGCGGGGCTGTTCC,GTCGTCCCCGCGCACGCGGGGCTGTTCC	28,28,28	0	0	NA	NA	NA:NA:NA	4,4,4	4	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|171aa|up_5|CP025990.1_5581129_5581642_+,NA|273aa|down_2|CP025990.1_5594966_5595785_-,NA|85aa|down_4|CP025990.1_5597835_5598090_+	NA|134aa|up_9|CP025990.1_5577477_5577879_-	cd01282, HTH_MerR-like_sg3, Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily	NA|171aa|up_8|CP025990.1_5577912_5578425_-	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase	NA|202aa|up_7|CP025990.1_5578970_5579576_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|383aa|up_6|CP025990.1_5579572_5580721_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|171aa|up_5|CP025990.1_5581129_5581642_+	NA	NA|826aa|up_4|CP025990.1_5581804_5584282_-	PRK05561, PRK05561, DNA topoisomerase 4 subunit A	NA|688aa|up_3|CP025990.1_5584361_5586425_-	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed	NA|252aa|up_2|CP025990.1_5586775_5587531_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|951aa|up_1|CP025990.1_5587541_5590394_+	pfam01326, PPDK_N, Pyruvate phosphate dikinase, PEP/pyruvate binding domain	WYL|325aa|up_0|CP025990.1_5590564_5591539_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|284aa|down_0|CP025990.1_5592413_5593265_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|114aa|down_1|CP025990.1_5593300_5593642_-	pfam01527, HTH_Tnp_1, Transposase	NA|273aa|down_2|CP025990.1_5594966_5595785_-	NA	NA|594aa|down_3|CP025990.1_5595946_5597728_+	COG1966, CstA, Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms]	NA|85aa|down_4|CP025990.1_5597835_5598090_+	NA	NA|298aa|down_5|CP025990.1_5598080_5598974_+	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|353aa|down_6|CP025990.1_5599110_5600169_-	cd08589, PI-PLCc_SaPLC1_like, Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins	NA|143aa|down_7|CP025990.1_5601216_5601645_-	pfam01243, Putative_PNPOx, Pyridoxamine 5'-phosphate oxidase	NA|279aa|down_8|CP025990.1_5601799_5602636_-	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|333aa|down_9|CP025990.1_5602716_5603715_+	pfam12852, Cupin_6, Cupin
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	41	5593702-5594585	33,39,32,34	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	WYL	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	GGAACAGCCCCGCGTGCGCGGGGACGAC,GTCGTCCCCGCGCACGCGGGGCTGTTCC,GTCGTCCCCGCGCACGCGGGGCTGTTCCN,GGAACAGCCCCGCGTGCGCGGGGACGACGC	28,28,29,30	0	0	NA	NA	NA:NA:NA:NA	11,14,14,11	14	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|171aa|up_7|CP025990.1_5581129_5581642_+,NA|273aa|down_0|CP025990.1_5594966_5595785_-,NA|85aa|down_2|CP025990.1_5597835_5598090_+,NA|81aa|down_8|CP025990.1_5603721_5603964_-,NA|117aa|down_9|CP025990.1_5603997_5604348_+	NA|202aa|up_9|CP025990.1_5578970_5579576_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|383aa|up_8|CP025990.1_5579572_5580721_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|171aa|up_7|CP025990.1_5581129_5581642_+	NA	NA|826aa|up_6|CP025990.1_5581804_5584282_-	PRK05561, PRK05561, DNA topoisomerase 4 subunit A	NA|688aa|up_5|CP025990.1_5584361_5586425_-	PRK05559, PRK05559, DNA topoisomerase IV subunit B; Reviewed	NA|252aa|up_4|CP025990.1_5586775_5587531_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|951aa|up_3|CP025990.1_5587541_5590394_+	pfam01326, PPDK_N, Pyruvate phosphate dikinase, PEP/pyruvate binding domain	WYL|325aa|up_2|CP025990.1_5590564_5591539_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|284aa|up_1|CP025990.1_5592413_5593265_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|114aa|up_0|CP025990.1_5593300_5593642_-	pfam01527, HTH_Tnp_1, Transposase	NA|273aa|down_0|CP025990.1_5594966_5595785_-	NA	NA|594aa|down_1|CP025990.1_5595946_5597728_+	COG1966, CstA, Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms]	NA|85aa|down_2|CP025990.1_5597835_5598090_+	NA	NA|298aa|down_3|CP025990.1_5598080_5598974_+	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|353aa|down_4|CP025990.1_5599110_5600169_-	cd08589, PI-PLCc_SaPLC1_like, Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins	NA|143aa|down_5|CP025990.1_5601216_5601645_-	pfam01243, Putative_PNPOx, Pyridoxamine 5'-phosphate oxidase	NA|279aa|down_6|CP025990.1_5601799_5602636_-	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|333aa|down_7|CP025990.1_5602716_5603715_+	pfam12852, Cupin_6, Cupin	NA|81aa|down_8|CP025990.1_5603721_5603964_-	NA	NA|117aa|down_9|CP025990.1_5603997_5604348_+	NA
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	42	5600546-5600880	40,33,35	CRISPRCasFinder,CRT,PILER-CR	no	WYL	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Unclear	GTCGTCCCCGCGCACGCGGGGCTGTTCC,GTCGTCCCCGCGCACGCGGGGCTGTTCC,GGAACAGCCCCGCGTGCGCGGGGACGACC	28,28,29	0	0	NA	NA	NA:NA:NA	5,5,3	5	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|273aa|up_4|CP025990.1_5594966_5595785_-,NA|85aa|up_2|CP025990.1_5597835_5598090_+,NA|81aa|down_3|CP025990.1_5603721_5603964_-,NA|117aa|down_4|CP025990.1_5603997_5604348_+,NA|266aa|down_5|CP025990.1_5604444_5605242_+,NA|546aa|down_9|CP025990.1_5609646_5611284_-	NA|252aa|up_9|CP025990.1_5586775_5587531_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|951aa|up_8|CP025990.1_5587541_5590394_+	pfam01326, PPDK_N, Pyruvate phosphate dikinase, PEP/pyruvate binding domain	WYL|325aa|up_7|CP025990.1_5590564_5591539_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|284aa|up_6|CP025990.1_5592413_5593265_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|114aa|up_5|CP025990.1_5593300_5593642_-	pfam01527, HTH_Tnp_1, Transposase	NA|273aa|up_4|CP025990.1_5594966_5595785_-	NA	NA|594aa|up_3|CP025990.1_5595946_5597728_+	COG1966, CstA, Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms]	NA|85aa|up_2|CP025990.1_5597835_5598090_+	NA	NA|298aa|up_1|CP025990.1_5598080_5598974_+	COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|353aa|up_0|CP025990.1_5599110_5600169_-	cd08589, PI-PLCc_SaPLC1_like, Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins	NA|143aa|down_0|CP025990.1_5601216_5601645_-	pfam01243, Putative_PNPOx, Pyridoxamine 5'-phosphate oxidase	NA|279aa|down_1|CP025990.1_5601799_5602636_-	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|333aa|down_2|CP025990.1_5602716_5603715_+	pfam12852, Cupin_6, Cupin	NA|81aa|down_3|CP025990.1_5603721_5603964_-	NA	NA|117aa|down_4|CP025990.1_5603997_5604348_+	NA	NA|266aa|down_5|CP025990.1_5604444_5605242_+	NA	NA|547aa|down_6|CP025990.1_5605534_5607175_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|337aa|down_7|CP025990.1_5607171_5608182_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|318aa|down_8|CP025990.1_5608227_5609181_+	cd20005, PBP1_ABC_sugar_binding-like, monosaccharide ABC transporter substrate-binding protein such as CUT2	NA|546aa|down_9|CP025990.1_5609646_5611284_-	NA
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	43	6195963-6196663	36,41,34,37	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	CGGAACAGCCCCGCGTGCGCGGGGACGACAC,GTCGTCCCCGCGCACGCGGGGCTGTTCC,GTCGTCCCCGCGCACGCGGGGCTGTTCC,GGAACAGCCCCGCGTGCGCGGGGACGAC	31,28,28,28	1	1	6196005-6196023	CP025990.1_784872-784854	NA:NA:NA:NA	8,11,11,8	11	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA,NA|62aa|down_3|CP025990.1_6205557_6205743_-,NA|441aa|down_9|CP025990.1_6216169_6217492_+	NA|458aa|up_9|CP025990.1_6178548_6179922_-	cd17253, RMtype1_S_Eco933I-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to Escherichia coli O157:H7 EDL933 S subunit (S	NA|66aa|up_8|CP025990.1_6180893_6181091_+	pfam04149, DUF397, Domain of unknown function (DUF397)	NA|329aa|up_7|CP025990.1_6182708_6183695_-	PRK09906, PRK09906, DNA-binding transcriptional regulator HcaR; Provisional	NA|243aa|up_6|CP025990.1_6183778_6184507_+	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs	NA|414aa|up_5|CP025990.1_6185498_6186740_+	TIGR04515, cytochrome_P450_monooxygenase, P450-derived glycosyltranferase activator	NA|418aa|up_4|CP025990.1_6186777_6188031_+	TIGR04516, probable_glycosyltransferase, glycosyltransferase, activator-dependent family	NA|965aa|up_3|CP025990.1_6188594_6191489_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|256aa|up_2|CP025990.1_6192155_6192923_-	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|198aa|up_1|CP025990.1_6194533_6195127_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|151aa|up_0|CP025990.1_6195501_6195954_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|301aa|down_0|CP025990.1_6196776_6197679_-	pfam04655, APH_6_hur, Aminoglycoside/hydroxyurea antibiotic resistance kinase	NA|245aa|down_1|CP025990.1_6201203_6201938_-	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|197aa|down_2|CP025990.1_6204608_6205199_-	pfam04978, DUF664, Protein of unknown function (DUF664)	NA|62aa|down_3|CP025990.1_6205557_6205743_-	NA	NA|1515aa|down_4|CP025990.1_6206192_6210737_-	PRK12467, PRK12467, peptide synthase; Provisional	NA|410aa|down_5|CP025990.1_6210775_6212005_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|263aa|down_6|CP025990.1_6212207_6212996_-	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family	NA|299aa|down_7|CP025990.1_6212992_6213889_-	cd19531, LCL_NRPS-like, LCL-type Condensation (C) domain of non-ribosomal peptide synthetases(NRPSs) and similar domains including the C-domain of SgcC5, a free-standing NRPS with both ester- and amide- bond forming activity	NA|378aa|down_8|CP025990.1_6214568_6215702_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|441aa|down_9|CP025990.1_6216169_6217492_+	NA
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	44	6577264-6577717	42,35,38	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas6e,cas5,cas7,cse2gr11	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Type I-E	GGAACAGCCCCGCGTGCGCGGGGAGGAC,GGAACAGCCCCGCGTGCGCGGGGAGGAC,GGAACAGCCCCGCGTGCGCGGGGAGGAC	28,28,28	1	1	6577596-6577628	CP025990.1_1355160-1355192	NA:NA:NA	7,7,5	7	TypeI-E	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|139aa|up_8|CP025990.1_6548624_6549041_-,NA|63aa|up_0|CP025990.1_6576794_6576983_-,NA|175aa|down_5|CP025990.1_6581972_6582497_+	NA|211aa|up_9|CP025990.1_6547972_6548605_-	pfam12079, DUF3558, Protein of unknown function (DUF3558)	NA|139aa|up_8|CP025990.1_6548624_6549041_-	NA	NA|1143aa|up_7|CP025990.1_6549539_6552968_-	cd08956, KR_3_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 3, complex (x)	NA|2832aa|up_6|CP025990.1_6552925_6561421_-	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|3310aa|up_5|CP025990.1_6561427_6571357_-	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|120aa|up_4|CP025990.1_6571602_6571962_-	smart00823, PKS_PP, Phosphopantetheine attachment site	NA|348aa|up_3|CP025990.1_6571940_6572984_-	cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations	NA|883aa|up_2|CP025990.1_6573012_6575661_-	cd08952, KR_1_SDR_x, ketoreductase (KR), subgroup 1, complex (x) SDRs	NA|96aa|up_1|CP025990.1_6576247_6576535_+	cd10443, GIY-YIG_HE_Tlr8p_PBC-V_like, GIY-YIG domain of uncharacterized hypothetical protein found in phycodnavirus PBCV-1 DNA virus, T	NA|63aa|up_0|CP025990.1_6576794_6576983_-	NA	NA|130aa|down_0|CP025990.1_6578005_6578395_+	TIGR03667, Rv3369, PPOX class probable F420-dependent enzyme, Rv3369 family	NA|152aa|down_1|CP025990.1_6578503_6578959_-	pfam18029, Glyoxalase_6, Glyoxalase-like domain	NA|206aa|down_2|CP025990.1_6579957_6580575_-	cd08899, SRPBCC_CalC_Aha1-like_6, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	NA|189aa|down_3|CP025990.1_6580879_6581446_-	pfam01243, Putative_PNPOx, Pyridoxamine 5'-phosphate oxidase	NA|157aa|down_4|CP025990.1_6581505_6581976_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|175aa|down_5|CP025990.1_6581972_6582497_+	NA	NA|207aa|down_6|CP025990.1_6582617_6583238_-	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|224aa|down_7|CP025990.1_6583234_6583906_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	cas2|120aa|down_8|CP025990.1_6584384_6584744_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas6e|222aa|down_9|CP025990.1_6585731_6586397_-	pfam08798, CRISPR_assoc, CRISPR associated protein
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	45	6584133-6584344	43,36,39	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas6e,cas5,cas7,cse2gr11	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Type I-E	GGAACAGCCCCGCGTGCGCGGGGAGGAC,GGAACAGCCCCGCGTGCGCGGGGAGGAC,GGAACAGCCCCGCGTGCGCGGGGAGGAC	28,28,28	0	0	NA	NA	NA:NA:NA	3,3,2	3	TypeI-E	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|63aa|up_8|CP025990.1_6576794_6576983_-,NA|175aa|up_2|CP025990.1_6581972_6582497_+,NA|74aa|down_6|CP025990.1_6597609_6597831_+	NA|96aa|up_9|CP025990.1_6576247_6576535_+	cd10443, GIY-YIG_HE_Tlr8p_PBC-V_like, GIY-YIG domain of uncharacterized hypothetical protein found in phycodnavirus PBCV-1 DNA virus, T	NA|63aa|up_8|CP025990.1_6576794_6576983_-	NA	NA|130aa|up_7|CP025990.1_6578005_6578395_+	TIGR03667, Rv3369, PPOX class probable F420-dependent enzyme, Rv3369 family	NA|152aa|up_6|CP025990.1_6578503_6578959_-	pfam18029, Glyoxalase_6, Glyoxalase-like domain	NA|206aa|up_5|CP025990.1_6579957_6580575_-	cd08899, SRPBCC_CalC_Aha1-like_6, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	NA|189aa|up_4|CP025990.1_6580879_6581446_-	pfam01243, Putative_PNPOx, Pyridoxamine 5'-phosphate oxidase	NA|157aa|up_3|CP025990.1_6581505_6581976_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|175aa|up_2|CP025990.1_6581972_6582497_+	NA	NA|207aa|up_1|CP025990.1_6582617_6583238_-	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|224aa|up_0|CP025990.1_6583234_6583906_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	cas2|120aa|down_0|CP025990.1_6584384_6584744_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas6e|222aa|down_1|CP025990.1_6585731_6586397_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|239aa|down_2|CP025990.1_6586396_6587113_-	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5)	cas7|380aa|down_3|CP025990.1_6587109_6588249_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|211aa|down_4|CP025990.1_6588245_6588878_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	NA|262aa|down_5|CP025990.1_6596700_6597486_+	TIGR03084, conserved_hypothetical_protein, TIGR03084 family protein	NA|74aa|down_6|CP025990.1_6597609_6597831_+	NA	NA|159aa|down_7|CP025990.1_6597982_6598459_-	smart00903, Flavin_Reduct, Flavin reductase like domain	NA|159aa|down_8|CP025990.1_6598554_6599031_-	cd00586, 4HBT, 4-hydroxybenzoyl-CoA thioesterase (4HBT)	NA|324aa|down_9|CP025990.1_6605520_6606492_+	pfam08012, DUF1702, Protein of unknown function (DUF1702)
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	47	6790061-6792079	37,40,45	CRT,PILER-CR,CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Orphan	NGTTGCGATCCTCACCGGCCCNGGAGGGCCGGTGCAAC,GTTGCGATCCTCACCGGCCCCGGAGGGCCGGT-------GCAAC,GTTGCGATCCTCACCGGCCCTGGAGGGCCGGTGCAAC	38,44,37	0	0	NA	NA	I-C,III-B:NA:I-C,III-B	27,26,26	27	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|150aa|up_0|CP025990.1_6789533_6789983_+,NA|315aa|down_7|CP025990.1_6805636_6806581_-	NA|322aa|up_9|CP025990.1_6778172_6779138_+	COG0798, ACR3, Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism]	NA|317aa|up_8|CP025990.1_6780269_6781220_+	cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16	NA|445aa|up_7|CP025990.1_6781503_6782838_-	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|445aa|up_6|CP025990.1_6782915_6784250_-	cd06818, PLPDE_III_cryptic_DSD, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Bacterial Cryptic D-Serine Dehydratase	NA|384aa|up_5|CP025990.1_6784246_6785398_-	cd03894, M20_ArgE, M20 Peptidase acetylornithine deacetylase	NA|241aa|up_4|CP025990.1_6785499_6786222_-	cd00452, KDPG_aldolase, KDPG and KHG aldolase	NA|346aa|up_3|CP025990.1_6786532_6787570_+	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)	NA|258aa|up_2|CP025990.1_6787631_6788405_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|138aa|up_1|CP025990.1_6788421_6788835_+	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|150aa|up_0|CP025990.1_6789533_6789983_+	NA	NA|310aa|down_0|CP025990.1_6792576_6793506_-	COG0506, PutA, Proline dehydrogenase [Amino acid transport and metabolism]	NA|542aa|down_1|CP025990.1_6793531_6795157_-	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17	NA|544aa|down_2|CP025990.1_6795284_6796916_+	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain	NA|124aa|down_3|CP025990.1_6797281_6797653_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|277aa|down_4|CP025990.1_6798024_6798855_+	cd19131, AKR_AKR5C2, Escherichia coli 2,5-diketo-D-gluconic acid reductase A (DkgA/YqhE) and similar proteins	NA|333aa|down_5|CP025990.1_6799141_6800140_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|1248aa|down_6|CP025990.1_6801339_6805083_+	PRK10150, PRK10150, beta-D-glucuronidase; Provisional	NA|315aa|down_7|CP025990.1_6805636_6806581_-	NA	NA|480aa|down_8|CP025990.1_6807363_6808803_+	cd16012, ALP, Alkaline Phosphatase	NA|286aa|down_9|CP025990.1_6808765_6809623_+	pfam14124, DUF4291, Domain of unknown function (DUF4291)
GCA_002895405.1_ASM289540v1	CP025990	Actinoalloteichus sp. AHMU CJ021 chromosome, complete genome	48	6810195-6810284	46	CRISPRCasFinder	no	cas8c	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	Type I-C,Type I-U, Type I-U?	GGGAGCATCCCCGCGTACGCGGGGCCGAT	29	0	0	NA	NA	NA	1	1	TypeI-C,TypeI-U,TypeI-U?	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas4,WYL,DEDDh,cas6,DinG,cas8c	NA|315aa|up_2|CP025990.1_6805636_6806581_-,NA|84aa|down_2|CP025990.1_6812614_6812866_-,NA|245aa|down_7|CP025990.1_6821114_6821849_+	NA|310aa|up_9|CP025990.1_6792576_6793506_-	COG0506, PutA, Proline dehydrogenase [Amino acid transport and metabolism]	NA|542aa|up_8|CP025990.1_6793531_6795157_-	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17	NA|544aa|up_7|CP025990.1_6795284_6796916_+	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain	NA|124aa|up_6|CP025990.1_6797281_6797653_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|277aa|up_5|CP025990.1_6798024_6798855_+	cd19131, AKR_AKR5C2, Escherichia coli 2,5-diketo-D-gluconic acid reductase A (DkgA/YqhE) and similar proteins	NA|333aa|up_4|CP025990.1_6799141_6800140_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|1248aa|up_3|CP025990.1_6801339_6805083_+	PRK10150, PRK10150, beta-D-glucuronidase; Provisional	NA|315aa|up_2|CP025990.1_6805636_6806581_-	NA	NA|480aa|up_1|CP025990.1_6807363_6808803_+	cd16012, ALP, Alkaline Phosphatase	NA|286aa|up_0|CP025990.1_6808765_6809623_+	pfam14124, DUF4291, Domain of unknown function (DUF4291)	NA|190aa|down_0|CP025990.1_6810695_6811265_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|318aa|down_1|CP025990.1_6811355_6812309_+	PRK06197, PRK06197, short chain dehydrogenase; Provisional	NA|84aa|down_2|CP025990.1_6812614_6812866_-	NA	NA|368aa|down_3|CP025990.1_6813331_6814435_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|402aa|down_4|CP025990.1_6815567_6816773_+	pfam01548, DEDD_Tnp_IS110, Transposase	cas8c|151aa|down_5|CP025990.1_6818616_6819069_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	NA|209aa|down_6|CP025990.1_6820583_6821210_-	pfam07591, PT-HINT, Pretoxin HINT domain	NA|245aa|down_7|CP025990.1_6821114_6821849_+	NA	NA|NA	NA	NA|NA	NA
