The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025951	Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome	5366808	186	5457	5366808	holin	Salmonella_phage(50.0%)	6	NA	NA
AUS18866.1|186_1503_+	right-handed parallel beta-helix repeat-containing protein	NA	A0A0K2FI18	Enterobacter_phage	32.3	2.3e-34
AUS18867.1|1589_1994_+	hypothetical protein	NA	T1SA79	Salmonella_phage	81.1	8.7e-54
AUS18868.1|1980_2286_+|holin	phage holin family protein	holin	A0A193GYK3	Enterobacter_phage	81.4	2.7e-39
AUS18869.1|2275_2905_+	endolysin	NA	Q858F0	Salmonella_phage	76.9	1.8e-90
AUS18870.1|2901_3402_+	DUF2514 domain-containing protein	NA	Q858E9	Salmonella_phage	76.9	1.3e-59
AUS18871.1|3588_5457_-	phosphatase	NA	A0A2P0VMN7	Tetraselmis_virus	22.6	2.6e-07
>prophage 2
CP025951	Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome	5366808	335575	342481	5366808		Planktothrix_phage(33.33%)	6	NA	NA
AUS23836.1|335575_336439_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	5.7e-10
AUS19157.1|336449_337223_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	3.9e-26
AUS23837.1|337464_338358_-	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
AUS19158.1|338603_339965_-	U32 family peptidase	NA	Q6DW11	Phage_TP	94.8	1.8e-207
AUS19159.1|340283_341006_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
AUS19160.1|341002_342481_-	two-component system sensor histidine kinase BaeA	NA	W8CYF6	Bacillus_phage	28.3	8.5e-30
>prophage 3
CP025951	Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome	5366808	383014	398760	5366808		Enterobacteria_phage(33.33%)	15	NA	NA
AUS19188.1|383014_384421_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.7	3.6e-38
AUS19189.1|384644_385709_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.7	4.4e-105
AUS19190.1|385722_386592_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	67.4	3.4e-111
AUS19191.1|386623_387514_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	3.7e-28
AUS19192.1|387528_388083_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	57.6	1.9e-51
AUS19193.1|388262_389429_+	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.7	7.0e-112
AUS19194.1|390377_391382_-	NAD-dependent epimerase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	29.2	4.0e-31
AUS19195.1|391337_391619_+	hypothetical protein	NA	NA	NA	NA	NA
AUS19196.1|392221_393286_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	55.0	2.6e-105
AUS19197.1|393299_394169_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	67.0	5.7e-111
AUS19198.1|394200_395091_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	3.7e-28
AUS19199.1|395105_395660_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	57.6	1.9e-51
AUS19200.1|395746_396577_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AUS19201.1|396605_397439_+	ABC transporter permease	NA	NA	NA	NA	NA
AUS19202.1|397428_398760_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.1	6.9e-15
>prophage 4
CP025951	Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome	5366808	1375342	1386230	5366808		Escherichia_phage(87.5%)	10	NA	NA
AUS20114.1|1375342_1378450_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.6	0.0e+00
AUS20115.1|1378504_1379770_+	MFS transporter	NA	NA	NA	NA	NA
AUS20116.1|1379800_1380889_-	chromosome segregation protein SMC	NA	A0A077SLJ9	Escherichia_phage	100.0	8.0e-211
AUS20117.1|1380975_1381236_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	97.7	3.5e-40
AUS20118.1|1381533_1382394_+	class A extended-spectrum beta-lactamase SHV-12	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
AUS20119.1|1382414_1383176_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
AUS20120.1|1383166_1383400_+	hypothetical protein	NA	NA	NA	NA	NA
AUS20121.1|1383437_1384340_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	100.0	5.3e-160
AUS20122.1|1384351_1385617_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	100.0	2.7e-234
AUS20123.1|1385609_1386230_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 5
CP025951	Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome	5366808	1580272	1652969	5366808	transposase,plate,lysis,terminase,protease,head,tail	uncultured_Caudovirales_phage(33.33%)	84	NA	NA
AUS20305.1|1580272_1581358_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AUS20306.1|1581321_1583076_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AUS20307.1|1584747_1588173_-	type VI secretion protein VasK	NA	NA	NA	NA	NA
AUS20308.1|1588156_1589296_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20309.1|1589292_1589550_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
AUS20310.1|1589594_1592012_-	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
AUS20311.1|1591999_1592530_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AUS20312.1|1592597_1593128_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AUS20313.1|1593196_1593727_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AUS20314.1|1593794_1594325_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AUS20315.1|1594393_1594924_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
AUS20316.1|1594987_1595767_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
AUS20317.1|1595767_1598146_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	33.8	9.2e-18
AUS20318.1|1598138_1600793_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	33.4	2.5e-96
AUS20319.1|1601057_1601549_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AUS20320.1|1601553_1603260_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20321.1|1603256_1603946_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
AUS23887.1|1603942_1605283_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
AUS20322.1|1605295_1606840_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AUS20323.1|1606882_1607374_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AUS20324.1|1607843_1608824_+|transposase	IS5 family transposase ISKpn26	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
AUS20325.1|1608862_1609006_-	ABC transporter	NA	NA	NA	NA	NA
AUS20326.1|1609419_1609668_+	damage-inducible protein DinI	NA	S5MQI1	Escherichia_phage	70.4	1.4e-25
AUS20327.1|1609890_1610175_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20328.1|1610279_1610489_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20329.1|1610485_1611217_-	hypothetical protein	NA	NA	NA	NA	NA
AUS23888.1|1611227_1611956_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20330.1|1614306_1614504_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20331.1|1614503_1615370_-	hypothetical protein	NA	A0A2H4IYR0	uncultured_Caudovirales_phage	64.5	1.9e-34
AUS20332.1|1615369_1616143_-	DUF2612 domain-containing protein	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	54.4	2.8e-77
AUS20333.1|1616139_1617336_-	hypothetical protein	NA	A0A0M4RD32	Salmonella_phage	72.9	3.9e-158
AUS20334.1|1617335_1617689_-	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	80.3	2.3e-50
AUS20335.1|1617690_1618344_-	hypothetical protein	NA	A0A2H4J8H6	uncultured_Caudovirales_phage	63.5	1.0e-59
AUS20336.1|1618397_1618964_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20337.1|1619000_1619186_+	hypothetical protein	NA	NA	NA	NA	NA
AUS20338.1|1619238_1619580_-	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	46.6	1.8e-23
AUS20339.1|1619579_1620602_-	hypothetical protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	54.2	9.2e-100
AUS20340.1|1620604_1620907_-	hypothetical protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	55.2	2.0e-26
AUS20341.1|1620907_1621507_-	hypothetical protein	NA	A0A2H4J1B3	uncultured_Caudovirales_phage	57.6	9.9e-54
AUS20342.1|1621506_1623510_-	lytic transglycosylase domain-containing protein	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	63.6	1.2e-247
AUS20343.1|1623499_1623652_-	NTP pyrophosphohydrolase	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	88.0	7.6e-19
AUS20344.1|1623687_1624113_-	hypothetical protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	63.4	2.6e-40
AUS20345.1|1624116_1624557_-	DUF3277 domain-containing protein	NA	A0A0M5M1K6	Salmonella_phage	80.1	3.3e-62
AUS20346.1|1624567_1625713_-	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	76.9	6.3e-166
AUS20347.1|1625716_1626157_-	hypothetical protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	51.7	1.6e-40
AUS20348.1|1626251_1626638_-|head,tail	head-tail adaptor	head,tail	A0A2H4J1A4	uncultured_Caudovirales_phage	78.2	1.1e-48
AUS20349.1|1626637_1627144_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20350.1|1627140_1627560_-	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	60.7	3.3e-40
AUS20351.1|1627528_1627810_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20352.1|1627849_1628791_-	DUF2184 domain-containing protein	NA	A0A2H4J191	uncultured_Caudovirales_phage	77.1	1.7e-137
AUS20353.1|1628802_1629297_-	hypothetical protein	NA	A0A2H4JHM9	uncultured_Caudovirales_phage	62.7	4.2e-50
AUS20354.1|1629300_1630503_-	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	54.1	2.6e-106
AUS23889.1|1630554_1631103_-	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	56.3	3.0e-49
AUS20355.1|1631158_1632610_-	hypothetical protein	NA	A0A0M4S6U1	Salmonella_phage	68.8	3.8e-192
AUS20356.1|1632847_1634248_-|terminase	PBSX family phage terminase large subunit	terminase	A0A077KAW0	Edwardsiella_phage	69.0	9.4e-188
AUS20357.1|1634198_1634951_-	hypothetical protein	NA	A0A077KBY7	Edwardsiella_phage	66.0	4.0e-12
AUS20358.1|1635052_1635373_-	negative regulator GrlR	NA	NA	NA	NA	NA
AUS20359.1|1635607_1635997_-	lipase chaperone	NA	A0A192Y6H8	Salmonella_phage	49.2	9.4e-21
AUS20360.1|1635993_1636524_-	lysozyme	NA	K7PLY1	Enterobacteria_phage	77.1	2.7e-79
AUS20361.1|1636526_1636775_-|lysis	lysis protein	lysis	NA	NA	NA	NA
AUS20362.1|1637180_1637963_-	antitermination protein	NA	F1C595	Cronobacter_phage	76.8	7.2e-113
AUS20363.1|1637959_1638436_-	hypothetical protein	NA	A0A286N2Q1	Klebsiella_phage	100.0	1.8e-90
AUS20364.1|1638432_1639395_-	DNA primase	NA	A0A286N2Q0	Klebsiella_phage	99.4	4.8e-183
AUS20365.1|1639396_1641055_-	helicase	NA	A0A286N2P9	Klebsiella_phage	96.0	0.0e+00
AUS20366.1|1641363_1641657_-	hypothetical protein	NA	A0A286S2B5	Klebsiella_phage	97.6	2.8e-38
AUS20367.1|1641631_1641853_-	XRE family transcriptional regulator	NA	A0A286S2C1	Klebsiella_phage	100.0	3.0e-32
AUS20368.1|1641950_1642619_+	LexA family transcriptional repressor	NA	A0A286S2B2	Klebsiella_phage	99.5	2.4e-125
AUS20369.1|1642789_1643104_+	hypothetical protein	NA	A0A286S1T9	Klebsiella_phage	100.0	1.0e-49
AUS20370.1|1643096_1643285_+	hypothetical protein	NA	A0A286S1P8	Klebsiella_phage	100.0	4.6e-26
AUS20371.1|1643454_1643820_+	hypothetical protein	NA	A0A286S1Q6	Klebsiella_phage	99.2	6.9e-58
AUS20372.1|1643812_1644067_+	hypothetical protein	NA	A0A286SGR4	Klebsiella_phage	97.6	3.1e-41
AUS20373.1|1644253_1644679_+	hypothetical protein	NA	A0A286S1S2	Klebsiella_phage	77.9	3.5e-53
AUS20374.1|1644675_1644870_+	hypothetical protein	NA	NA	NA	NA	NA
AUS20375.1|1644866_1645694_+|protease	protease modulator HflC	protease	Q8W654	Enterobacteria_phage	84.0	5.5e-111
AUS20376.1|1645798_1646317_+	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	98.8	1.7e-94
AUS20377.1|1646322_1647033_+	DNA-binding protein	NA	A0A286S260	Klebsiella_phage	88.3	2.1e-111
AUS20378.1|1647022_1647247_+	hypothetical protein	NA	A0A286S2B3	Klebsiella_phage	89.2	3.1e-29
AUS20379.1|1647243_1647456_+	hypothetical protein	NA	A0A286S2B6	Klebsiella_phage	98.6	3.4e-33
AUS20380.1|1647452_1647932_+	hypothetical protein	NA	NA	NA	NA	NA
AUS20381.1|1648110_1648353_+	AlpA family transcriptional regulator	NA	A0A0M4RTZ2	Salmonella_phage	73.8	2.2e-20
AUS20382.1|1648333_1649515_-	tyrosine recombinase XerS	NA	A0A0M4QX09	Salmonella_phage	84.2	5.6e-202
AUS20383.1|1649711_1650260_+|protease	protease	protease	NA	NA	NA	NA
AUS20384.1|1650458_1651991_-	phosphohydrolase	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	30.0	1.1e-21
AUS20385.1|1652207_1652969_-	3-oxoacyl-ACP reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.5	2.4e-20
>prophage 6
CP025951	Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome	5366808	1685902	1716946	5366808	holin,transposase,integrase	Enterobacteria_phage(37.5%)	41	1685684:1685699	1714252:1714267
1685684:1685699	attL	TATGCCCTACGATAGC	NA	NA	NA	NA
AUS20416.1|1685902_1686574_+	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	59.6	4.5e-79
AUS23892.1|1686760_1687588_+	FRG domain-containing protein	NA	A0A1S6KZX9	Salmonella_phage	30.2	8.4e-19
AUS20417.1|1687663_1688929_-	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	82.7	9.6e-208
AUS20418.1|1688930_1689350_-	translesion error-prone DNA polymerase V subunit UmuD	NA	A0A1W6JNS2	Morganella_phage	57.5	1.4e-35
AUS20419.1|1689429_1690914_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AUS20420.1|1690913_1691165_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20421.1|1691811_1692234_-	hypothetical protein	NA	K7P834	Enterobacteria_phage	45.3	3.6e-26
AUS20422.1|1692826_1693531_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUS20423.1|1694146_1694494_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
AUS23893.1|1694657_1695449_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
AUS20424.1|1696430_1697135_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUS20425.1|1697171_1697459_-	hypothetical protein	NA	A0A286N2Q7	Klebsiella_phage	95.4	4.4e-36
AUS20426.1|1697455_1697995_-	hypothetical protein	NA	A0A286N2Q6	Klebsiella_phage	98.9	3.3e-101
AUS20427.1|1697991_1698303_-|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	100.0	3.8e-49
AUS23894.1|1698940_1699630_-	antiterminator	NA	I6PDF8	Cronobacter_phage	53.1	2.1e-55
AUS20428.1|1699766_1700405_-	hypothetical protein	NA	H6WRY9	Salmonella_phage	69.8	3.2e-74
AUS20429.1|1700397_1701066_-	serine/threonine protein phosphatase	NA	K7P6H8	Enterobacteria_phage	78.7	1.4e-104
AUS20430.1|1701062_1701230_-	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	62.5	4.6e-09
AUS20431.1|1701210_1701678_-	recombination protein NinB	NA	Q8VNP6	Enterobacteria_phage	45.8	3.4e-33
AUS20432.1|1702198_1703227_+	hypothetical protein	NA	NA	NA	NA	NA
AUS20433.1|1703434_1703680_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20434.1|1703735_1704038_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AUS20435.1|1704034_1704883_-	ATP-binding protein	NA	K7PLU3	Enterobacteria_phage	60.1	5.1e-88
AUS20436.1|1704879_1705740_-	replication protein	NA	K7PGT1	Enterobacteria_phage	53.3	1.0e-59
AUS20437.1|1705825_1706047_-	transcriptional regulator	NA	G8EYH8	Enterobacteria_phage	41.7	6.9e-05
AUS20438.1|1706087_1706315_-	transcriptional regulator	NA	Q76H55	Enterobacteria_phage	77.1	1.4e-24
AUS23895.1|1706426_1707125_+	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	84.1	3.7e-108
AUS23896.1|1707147_1707267_+	hypothetical protein	NA	NA	NA	NA	NA
AUS20439.1|1707412_1708489_+	ParA family protein	NA	H2BD62	Pseudomonas_phage	37.9	9.1e-58
AUS20440.1|1708570_1708774_-	hypothetical protein	NA	A0A192Y6Q5	Salmonella_phage	71.6	3.9e-18
AUS20441.1|1709202_1709397_+	hypothetical protein	NA	NA	NA	NA	NA
AUS20442.1|1709485_1709770_+	hypothetical protein	NA	G8C7T1	Escherichia_phage	79.8	1.1e-39
AUS20443.1|1709785_1710631_+	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	59.2	1.8e-69
AUS20444.1|1710916_1711597_+	exonuclease	NA	A0A0M3ULE0	Salmonella_phage	91.2	8.2e-121
AUS20445.1|1711593_1712022_+	regulator	NA	M9NYX4	Enterobacteria_phage	80.3	7.5e-64
AUS20446.1|1712018_1712681_+	DNA methyltransferase	NA	G8C7S6	Escherichia_phage	84.6	2.7e-105
AUS20447.1|1712677_1712992_+	hypothetical protein	NA	K7PM28	Enterobacteria_phage	50.8	1.6e-10
AUS23897.1|1712888_1714076_-|integrase	site-specific integrase	integrase	K7PGY1	Enterobacteria_phage	52.4	1.1e-120
AUS20448.1|1714252_1715143_+	peptide ABC transporter permease SapC	NA	NA	NA	NA	NA
1714252:1714267	attR	TATGCCCTACGATAGC	NA	NA	NA	NA
AUS20449.1|1715142_1716135_+	peptide ABC transporter ATP-binding protein SapD	NA	G9BWD6	Planktothrix_phage	27.2	3.0e-07
AUS20450.1|1716136_1716946_+	peptide ABC transporter ATP-binding protein SapF	NA	A0A2H4PQG7	Staphylococcus_phage	28.9	2.1e-14
>prophage 7
CP025951	Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome	5366808	2079286	2164692	5366808	transposase,plate,capsid,portal,tRNA,protease,integrase,head,tail	Salmonella_phage(47.92%)	84	2134812:2134830	2164767:2164785
AUS20780.1|2079286_2080579_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.7	7.3e-94
AUS20781.1|2080669_2082013_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.8	7.3e-81
AUS20782.1|2082021_2082633_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA	NA
AUS20783.1|2082755_2087009_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	49.2	5.2e-88
AUS20784.1|2087144_2087639_-	leucine-responsive regulatory protein	NA	NA	NA	NA	NA
AUS20785.1|2088171_2089140_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.0	3.2e-62
AUS20786.1|2089254_2091021_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	25.9	2.3e-21
AUS20787.1|2091021_2092743_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
AUS20788.1|2092787_2093489_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
AUS20789.1|2093842_2094061_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
AUS20790.1|2094181_2096461_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
AUS20791.1|2096491_2096809_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
AUS20792.1|2097134_2097356_+	cold shock domain protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
AUS20793.1|2097310_2097493_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20794.1|2097432_2099373_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
AUS20795.1|2099369_2100485_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
AUS20796.1|2100631_2102290_-	ATP-dependent endonuclease	NA	NA	NA	NA	NA
AUS20797.1|2102709_2103405_+	aquaporin Z	NA	NA	NA	NA	NA
AUS20798.1|2103520_2104420_+	hypothetical protein	NA	NA	NA	NA	NA
AUS23912.1|2104563_2106216_+	hydroxylamine reductase	NA	NA	NA	NA	NA
AUS20799.1|2106226_2107195_+	NADH oxidoreductase	NA	NA	NA	NA	NA
AUS20800.1|2107145_2107349_+	hypothetical protein	NA	NA	NA	NA	NA
AUS20801.1|2107406_2107841_-	DoxX family protein	NA	NA	NA	NA	NA
AUS23913.1|2107992_2109711_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA	NA
AUS20802.1|2109749_2110751_+	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
AUS20803.1|2110761_2112204_+	DUF2867 domain-containing protein	NA	NA	NA	NA	NA
AUS20804.1|2112291_2113305_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AUS20805.1|2113301_2114132_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1B0UZW5	Roseobacter_phage	31.6	4.1e-05
AUS20806.1|2114163_2115303_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AUS20807.1|2115355_2115535_+	hypothetical protein	NA	NA	NA	NA	NA
AUS20808.1|2116180_2116696_+	lipoprotein	NA	NA	NA	NA	NA
AUS20809.1|2116922_2117651_+	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	37.1	1.2e-29
AUS23914.1|2117671_2118403_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUS20810.1|2118409_2119126_+	arginine transporter permease subunit ArtQ	NA	NA	NA	NA	NA
AUS20811.1|2119125_2119794_+	arginine transporter permease subunit ArtM	NA	NA	NA	NA	NA
AUS20812.1|2119977_2120709_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUS20813.1|2120751_2122224_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	31.8	7.9e-28
AUS20814.1|2122220_2122937_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	36.9	2.1e-34
AUS20815.1|2123015_2124143_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	A0A2K5B251	Erysipelothrix_phage	25.6	1.3e-19
AUS20816.1|2124184_2124673_-	DUF2593 domain-containing protein	NA	NA	NA	NA	NA
AUS20817.1|2124730_2125576_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
AUS20818.1|2125572_2126526_-	putrescine ABC transporter permease	NA	NA	NA	NA	NA
AUS23915.1|2126536_2127670_-	polyamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.9	2.2e-30
AUS20819.1|2127833_2128946_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA	NA
AUS20820.1|2129294_2129774_-	YbjN domain-containing protein	NA	NA	NA	NA	NA
AUS20821.1|2129862_2130765_-	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D7SR78	Cyanophage	35.3	2.0e-34
AUS20822.1|2131586_2131874_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20823.1|2132076_2132340_+	GrxA family glutaredoxin	NA	A0A2I7SAE2	Vibrio_phage	73.1	1.6e-27
AUS20824.1|2132346_2132730_-	hypothetical protein	NA	NA	NA	NA	NA
AUS23916.1|2132996_2134682_+	transporter	NA	NA	NA	NA	NA
2134812:2134830	attL	ATGGGTTTTTTGTTGCCTG	NA	NA	NA	NA
AUS20825.1|2134901_2135120_-	transcriptional regulator	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
AUS20826.1|2135211_2136312_-	late control protein D	NA	A0A1S6KZZ5	Salmonella_phage	87.4	4.9e-176
AUS20827.1|2136308_2136794_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	75.6	7.2e-63
AUS20828.1|2136790_2139418_-|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	42.0	5.6e-117
AUS20829.1|2139410_2139530_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
AUS20830.1|2139544_2139844_-|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	79.0	3.7e-33
AUS20831.1|2139896_2140412_-|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	85.4	1.3e-81
AUS20832.1|2140421_2141594_-|tail	phage tail protein	tail	A0A1S6KZY7	Salmonella_phage	93.3	1.9e-210
AUS20833.1|2141732_2142809_-|tail	phage tail protein	tail	Q37842	Escherichia_phage	44.8	1.2e-25
AUS20834.1|2142838_2143042_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20835.1|2143038_2143770_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20836.1|2143773_2146725_-	hypothetical protein	NA	A0A2H4N7A3	Pectobacterium_phage	50.9	1.2e-06
AUS23917.1|2146726_2147326_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	60.5	1.3e-58
AUS20837.1|2147318_2148227_-|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	66.9	7.6e-106
AUS20838.1|2148213_2148576_-|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	83.9	4.9e-48
AUS20839.1|2148572_2149145_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	72.3	4.7e-77
AUS20840.1|2149239_2149932_+	hypothetical protein	NA	NA	NA	NA	NA
AUS20841.1|2149928_2150375_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	71.2	2.2e-50
AUS20842.1|2150367_2150799_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	82.5	9.9e-64
AUS20843.1|2150894_2151323_-	hypothetical protein	NA	A0A1S6KZX8	Salmonella_phage	77.9	9.6e-51
AUS20844.1|2151319_2151703_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	42.0	2.1e-17
AUS20845.1|2151707_2152217_-	lysozyme	NA	E5G6N1	Salmonella_phage	83.4	2.1e-81
AUS20846.1|2152197_2152413_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	90.1	3.6e-30
AUS20847.1|2152416_2152620_-|tail	phage tail protein	tail	A0A1S6KZY4	Salmonella_phage	88.1	1.3e-29
AUS20848.1|2152619_2153084_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.0	8.4e-77
AUS20849.1|2153179_2153830_-	hypothetical protein	NA	E5G6M7	Salmonella_phage	96.3	8.7e-112
AUS20850.1|2153833_2154892_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	93.1	1.1e-180
AUS20851.1|2154908_2155742_-|capsid	capsid protein	capsid	A0A1S6KZW9	Salmonella_phage	88.8	6.3e-123
AUS20852.1|2155884_2157651_+	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	99.0	0.0e+00
AUS20853.1|2157650_2158676_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	86.7	7.6e-171
AUS20854.1|2158737_2160480_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20855.1|2160827_2161808_+|transposase	IS5 family transposase ISKpn26	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
AUS20856.1|2163220_2163472_-	hypothetical protein	NA	NA	NA	NA	NA
AUS20857.1|2163639_2164692_+|integrase	integrase	integrase	A0A218M4I3	Erwinia_phage	57.0	1.0e-106
2164767:2164785	attR	ATGGGTTTTTTGTTGCCTG	NA	NA	NA	NA
>prophage 8
CP025951	Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome	5366808	2818236	2829889	5366808	integrase	Enterobacteria_phage(70.0%)	13	2818686:2818700	2841742:2841756
AUS21444.1|2818236_2819340_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.5	4.8e-62
2818686:2818700	attL	CAATCTCTCCGCGCT	NA	NA	NA	NA
AUS21445.1|2819350_2820604_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	44.9	8.9e-89
AUS21446.1|2820956_2822147_+|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	62.7	6.4e-145
AUS21447.1|2822134_2823085_+	cobyrinic acid a,c-diamide synthase	NA	A0A1X9IGI7	Lactococcus_phage	27.1	1.2e-13
AUS21448.1|2823084_2823510_+	hypothetical protein	NA	NA	NA	NA	NA
AUS21449.1|2824077_2824644_-	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	9.7e-59
AUS21450.1|2824661_2824907_-	hypothetical protein	NA	Q7M294	Enterobacteria_phage	56.8	5.5e-19
AUS21451.1|2824903_2825641_-	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	59.4	1.9e-70
AUS21452.1|2826182_2826449_+	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	71.6	2.6e-30
AUS21453.1|2826445_2827003_+	Ash-like/host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	70.4	1.8e-33
AUS21454.1|2826999_2827227_+	hypothetical protein	NA	NA	NA	NA	NA
AUS21455.1|2827223_2827544_+	hypothetical protein	NA	NA	NA	NA	NA
AUS21456.1|2827555_2829889_+	DNA primase	NA	Q7M2A8	Enterobacteria_phage	82.2	0.0e+00
2841742:2841756	attR	CAATCTCTCCGCGCT	NA	NA	NA	NA
>prophage 9
CP025951	Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome	5366808	3297893	3306010	5366808	transposase	Enterobacteria_phage(83.33%)	8	NA	NA
AUS21863.1|3297893_3300227_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	83.9	0.0e+00
AUS21864.1|3300241_3300562_-	hypothetical protein	NA	NA	NA	NA	NA
AUS21865.1|3300558_3300786_-	hypothetical protein	NA	NA	NA	NA	NA
AUS21866.1|3300782_3301331_-	Ash-like/host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	69.4	1.1e-30
AUS21867.1|3302154_3302892_+	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	59.4	1.1e-70
AUS21868.1|3302888_3303134_+	hypothetical protein	NA	Q7M294	Enterobacteria_phage	56.8	5.5e-19
AUS21869.1|3303151_3303718_+	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	9.7e-59
AUS21870.1|3305029_3306010_+|transposase	IS5 family transposase ISKpn26	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
>prophage 10
CP025951	Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome	5366808	4377199	4446577	5366808	capsid,portal,terminase,tRNA,integrase,protease,tail,head	uncultured_Caudovirales_phage(61.11%)	75	4394807:4394824	4410802:4410819
AUS22851.1|4377199_4378147_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	37.2	2.2e-07
AUS22852.1|4378161_4378671_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	40.3	2.6e-18
AUS22853.1|4378799_4379924_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
AUS22854.1|4379895_4380369_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
AUS22855.1|4380394_4380937_+	hypothetical protein	NA	NA	NA	NA	NA
AUS22856.1|4380941_4381514_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA	NA
AUS22857.1|4381517_4382336_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
AUS22858.1|4382332_4382590_+	DUF1488 domain-containing protein	NA	NA	NA	NA	NA
AUS24015.1|4382565_4383120_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
AUS22859.1|4388915_4389137_-	hypothetical protein	NA	NA	NA	NA	NA
AUS22860.1|4389430_4392541_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AUS22861.1|4392553_4393693_-	MexX family efflux pump subunit	NA	NA	NA	NA	NA
AUS22862.1|4394071_4394722_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA	NA
4394807:4394824	attL	GTATCAGTTCATGCCGTA	NA	NA	NA	NA
AUS22863.1|4394997_4396224_+|integrase	site-specific integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	62.2	1.8e-150
AUS22864.1|4396316_4397258_+	hypothetical protein	NA	NA	NA	NA	NA
AUS22865.1|4397439_4397724_+	transcriptional regulator	NA	NA	NA	NA	NA
AUS22866.1|4397734_4398514_+	hypothetical protein	NA	Q8HA02	Enterobacteria_phage	51.5	6.2e-40
AUS22867.1|4398637_4398832_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
AUS24016.1|4399055_4399235_+	host cell division inhibitor Icd-like protein	NA	A0A2H4JGW3	uncultured_Caudovirales_phage	94.9	2.6e-26
AUS22868.1|4399227_4399416_+	hypothetical protein	NA	NA	NA	NA	NA
AUS22869.1|4399408_4399723_+	hypothetical protein	NA	NA	NA	NA	NA
AUS22870.1|4399719_4400088_+	hypothetical protein	NA	A0A2H4JCX7	uncultured_Caudovirales_phage	81.1	3.7e-51
AUS22871.1|4400084_4400450_+	hypothetical protein	NA	NA	NA	NA	NA
AUS22872.1|4400449_4402585_+	DNA primase	NA	A0A1W6JPG0	Morganella_phage	62.4	3.4e-205
AUS22873.1|4402927_4403263_+	hypothetical protein	NA	NA	NA	NA	NA
AUS22874.1|4403311_4403824_-	hypothetical protein	NA	NA	NA	NA	NA
AUS22875.1|4404087_4405254_+|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	95.9	9.8e-207
AUS22876.1|4405305_4405866_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	95.7	1.2e-98
AUS22877.1|4405867_4407109_+|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	96.5	1.0e-230
AUS22878.1|4407105_4407441_+|head,tail	head-tail adaptor	head,tail	A0A2H4JHK5	uncultured_Caudovirales_phage	57.8	3.7e-26
AUS22879.1|4407437_4407737_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JD08	uncultured_Caudovirales_phage	80.8	3.4e-39
AUS22880.1|4407736_4408180_+	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	91.8	2.8e-77
AUS22881.1|4408306_4408498_+|terminase	terminase	terminase	NA	NA	NA	NA
AUS22882.1|4408455_4408812_+|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	99.2	5.5e-60
AUS22883.1|4408795_4410457_+|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	98.0	0.0e+00
AUS22884.1|4410459_4410651_+	hypothetical protein	NA	NA	NA	NA	NA
AUS22885.1|4410804_4411101_-	Fis family transcriptional regulator	NA	NA	NA	NA	NA
4410802:4410819	attR	GTATCAGTTCATGCCGTA	NA	NA	NA	NA
AUS22886.1|4411125_4412091_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AUS22887.1|4412248_4412443_-	hypothetical protein	NA	NA	NA	NA	NA
AUS22888.1|4412448_4413330_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
AUS22889.1|4413341_4414793_-	sodium/panthothenate symporter	NA	NA	NA	NA	NA
AUS22890.1|4414782_4415025_-	hypothetical protein	NA	NA	NA	NA	NA
AUS22891.1|4415135_4416485_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AUS22892.1|4416495_4416963_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AUS22893.1|4416985_4417438_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
AUS22894.1|4417661_4418270_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
AUS22895.1|4418269_4419271_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
AUS22896.1|4419499_4419691_+	hypothetical protein	NA	NA	NA	NA	NA
AUS22897.1|4419770_4421711_+	RNase E specificity factor CsrD	NA	NA	NA	NA	NA
AUS22898.1|4421832_4422039_-	hypothetical protein	NA	NA	NA	NA	NA
AUS22899.1|4422016_4423060_+	rod shape-determining protein	NA	F2Y0P3	Organic_Lake_phycodnavirus	22.3	6.7e-05
AUS22900.1|4423130_4424123_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
AUS22901.1|4424122_4424611_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
AUS22902.1|4424618_4425200_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AUS22903.1|4425202_4426672_+	ribonuclease G	NA	NA	NA	NA	NA
AUS22904.1|4426709_4430507_+	AsmA2 domain-containing protein	NA	NA	NA	NA	NA
AUS22905.1|4430595_4432041_+|protease	metalloprotease TldD	protease	NA	NA	NA	NA
AUS22906.1|4432076_4433006_-	transcriptional regulator	NA	NA	NA	NA	NA
AUS22907.1|4433137_4433341_+	protein AaeX	NA	NA	NA	NA	NA
AUS22908.1|4433348_4434281_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA	NA
AUS22909.1|4434286_4436254_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA	NA
AUS22910.1|4436333_4436609_+	hypothetical protein	NA	NA	NA	NA	NA
AUS22911.1|4436659_4436926_-	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
AUS22912.1|4437024_4437288_-	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
AUS22913.1|4437663_4438134_-	arginine repressor	NA	NA	NA	NA	NA
AUS22914.1|4438548_4439487_+	malate dehydrogenase	NA	NA	NA	NA	NA
AUS22915.1|4439623_4440682_-|protease	serine endoprotease DegS	protease	NA	NA	NA	NA
AUS22916.1|4440769_4442137_-|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	25.3	6.0e-22
AUS22917.1|4442310_4442709_-	hypothetical protein	NA	NA	NA	NA	NA
AUS22918.1|4442899_4444027_+	cell division protein ZapE	NA	NA	NA	NA	NA
AUS22919.1|4444292_4444721_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
AUS22920.1|4444736_4445129_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
AUS22921.1|4445238_4445442_-	hypothetical protein	NA	NA	NA	NA	NA
AUS22922.1|4445440_4446079_+	stringent starvation protein A	NA	NA	NA	NA	NA
AUS22923.1|4446082_4446577_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	54.8	1.5e-26
>prophage 11
CP025951	Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome	5366808	5169722	5248542	5366808	transposase,plate,coat,capsid,portal,tRNA,integrase,head,tail	Salmonella_phage(73.47%)	86	5169137:5169183	5207492:5207538
5169137:5169183	attL	TTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT	NA	NA	NA	NA
AUS23624.1|5169722_5170703_-|transposase	IS5 family transposase ISKpn26	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
AUS23625.1|5170748_5171747_-|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	94.5	2.2e-183
AUS23626.1|5171749_5172379_-	precorrin-3B C(17)-methyltransferase	NA	A0A1S6KZZ7	Salmonella_phage	54.5	1.4e-61
AUS23627.1|5172501_5172744_+	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	98.8	4.0e-38
AUS23628.1|5172776_5173286_+	hypothetical protein	NA	A0A1S6L008	Salmonella_phage	85.8	1.1e-77
AUS23629.1|5173293_5173494_+	DUF2724 domain-containing protein	NA	A0A1S6L005	Salmonella_phage	68.8	4.5e-19
AUS23630.1|5173457_5173796_+	hypothetical protein	NA	A0A218M4I7	Erwinia_phage	58.0	6.2e-29
AUS23631.1|5173863_5174097_+	DUF2732 domain-containing protein	NA	A0A1S6L021	Salmonella_phage	90.9	6.0e-31
AUS23632.1|5174096_5174324_+	hypothetical protein	NA	A0A1S6L007	Salmonella_phage	92.0	5.1e-35
AUS23633.1|5174320_5175172_+	DNA adenine methylase	NA	A0A1S6L011	Salmonella_phage	75.4	2.2e-115
AUS23634.1|5175168_5177553_+	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	87.9	0.0e+00
AUS23635.1|5177782_5178034_+	hypothetical protein	NA	NA	NA	NA	NA
AUS23636.1|5178033_5179518_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AUS23637.1|5179625_5179814_+	hypothetical protein	NA	A0A1S6L006	Salmonella_phage	90.3	2.2e-23
AUS23638.1|5179825_5180059_+	DinI family protein	NA	A0A0M4S6H1	Salmonella_phage	96.1	2.0e-34
AUS23639.1|5180154_5180838_-	hypothetical protein	NA	NA	NA	NA	NA
AUS23640.1|5180824_5181904_-	hypothetical protein	NA	NA	NA	NA	NA
AUS23641.1|5181903_5182905_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24041.1|5183426_5183696_+	hypothetical protein	NA	D2IZW1	Enterococcus_phage	41.3	1.4e-15
AUS23642.1|5183752_5184796_-|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	85.6	3.1e-172
AUS23643.1|5184795_5186559_-	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	91.8	0.0e+00
AUS23644.1|5186699_5187533_+	murein hydrolase activator EnvC	NA	A0A1S6KZW9	Salmonella_phage	77.6	4.4e-100
AUS23645.1|5187549_5188602_+|capsid	phage major capsid protein, P2 family	capsid	A0A1S6KZZ3	Salmonella_phage	91.0	6.8e-175
AUS23646.1|5188605_5189259_+	hypothetical protein	NA	A0A1S6KZX1	Salmonella_phage	80.0	1.9e-90
AUS23647.1|5189354_5189819_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	85.7	1.5e-73
AUS23648.1|5189818_5190022_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	89.6	9.8e-30
AUS24042.1|5190025_5190241_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	88.7	6.1e-30
AUS23649.1|5190221_5190731_+	lysozyme	NA	E5G6N1	Salmonella_phage	85.2	1.6e-81
AUS23650.1|5190735_5191119_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	45.4	1.9e-18
AUS23651.1|5191115_5191544_+	hypothetical protein	NA	A0A1S6KZX8	Salmonella_phage	82.5	7.1e-54
AUS23652.1|5191473_5191677_+	hypothetical protein	NA	A0A1S6KZX6	Salmonella_phage	77.6	3.0e-23
AUS23653.1|5191639_5192062_+|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	83.2	8.2e-63
AUS23654.1|5192054_5192501_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	72.3	2.5e-54
AUS23655.1|5192523_5193390_-	hypothetical protein	NA	NA	NA	NA	NA
AUS23656.1|5193484_5194057_+|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	70.8	1.4e-76
AUS23657.1|5194053_5194416_+|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	85.6	8.4e-48
AUS23658.1|5194402_5195311_+|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	68.9	1.9e-109
AUS24043.1|5195303_5195975_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	58.9	3.2e-61
AUS23659.1|5195976_5197926_+|coat	spore coat protein CotH	coat	Q6QI97	Burkholderia_phage	38.9	1.0e-06
AUS23660.1|5197935_5199054_+	hypothetical protein	NA	A0A248XD67	Klebsiella_phage	38.0	4.4e-55
AUS23661.1|5199105_5200179_+|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	53.6	6.6e-40
AUS23662.1|5200327_5201500_+|tail	phage tail protein	tail	A0A1S6KZY7	Salmonella_phage	91.5	3.4e-207
AUS23663.1|5201509_5202025_+|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	84.2	1.4e-80
AUS23664.1|5202077_5202377_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	78.0	8.2e-33
AUS23665.1|5202391_5202511_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
AUS23666.1|5202503_5205134_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	41.9	8.9e-115
AUS23667.1|5205130_5205616_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	80.1	5.2e-61
AUS23668.1|5205612_5206707_+	late control protein D	NA	E5G6Q3	Salmonella_phage	83.6	2.4e-170
AUS23669.1|5206773_5206992_+	positive regulator of late gene transcription	NA	Q53ZE7	Salmonella_virus	72.2	1.9e-26
AUS23670.1|5207019_5207397_-	hypothetical protein	NA	NA	NA	NA	NA
AUS23671.1|5208000_5208483_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	47.4	2.3e-29
5207492:5207538	attR	TTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT	NA	NA	NA	NA
AUS23672.1|5208593_5209070_+	ubiquinone-binding protein	NA	NA	NA	NA	NA
AUS23673.1|5209059_5209350_+	RnfH family protein	NA	NA	NA	NA	NA
AUS23674.1|5209416_5209758_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
AUS23675.1|5209905_5211567_-	DNA repair protein RecN	NA	NA	NA	NA	NA
AUS23676.1|5211653_5212532_-	NAD(+) kinase	NA	NA	NA	NA	NA
AUS23677.1|5212656_5213247_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
AUS23678.1|5213366_5214653_-	DUF21 domain-containing protein	NA	NA	NA	NA	NA
AUS23679.1|5214672_5215464_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
AUS23680.1|5215627_5216992_+	signal recognition particle protein	NA	NA	NA	NA	NA
AUS23681.1|5217251_5217500_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
AUS23682.1|5217518_5218067_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AUS23683.1|5218098_5218866_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AUS23684.1|5218905_5219253_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
AUS23685.1|5219372_5219831_+	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
AUS23686.1|5219887_5221258_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
AUS23687.1|5221266_5221749_-	hypothetical protein	NA	NA	NA	NA	NA
AUS23688.1|5221762_5222986_-	diguanylate cyclase	NA	NA	NA	NA	NA
AUS23689.1|5222978_5223488_-	DUF4154 domain-containing protein	NA	NA	NA	NA	NA
AUS23690.1|5223830_5224901_+	3-deoxy-7-phosphoheptulonate synthase	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.5	1.8e-90
AUS23691.1|5224910_5226032_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
AUS23692.1|5226094_5226967_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
AUS23693.1|5226963_5228124_-	prephenate dehydratase	NA	NA	NA	NA	NA
AUS24044.1|5228224_5228272_-	hypothetical protein	NA	NA	NA	NA	NA
AUS23694.1|5228378_5228714_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
AUS23695.1|5228984_5229722_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
AUS23696.1|5229853_5230834_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
AUS23697.1|5230830_5231562_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
AUS23698.1|5231691_5234265_+	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.4	6.9e-128
AUS23699.1|5240230_5241529_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	31.5	3.1e-44
AUS23700.1|5241532_5241856_-	hypothetical protein	NA	NA	NA	NA	NA
AUS23701.1|5241897_5243253_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
AUS23702.1|5243373_5246025_-	protein lysine acetyltransferase	NA	NA	NA	NA	NA
AUS23703.1|5246059_5246758_-	DTW domain-containing protein	NA	NA	NA	NA	NA
AUS23704.1|5246827_5247253_-	thioredoxin TrxC	NA	A0A1J0GW78	Streptomyces_phage	40.2	6.0e-13
AUS23705.1|5247456_5248542_+|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
>prophage 12
CP025951	Klebsiella pneumoniae subsp. pneumoniae strain GD4 chromosome, complete genome	5366808	5323582	5362456	5366808	tail,terminase	Salmonella_phage(38.64%)	51	NA	NA
AUS23772.1|5323582_5325049_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	1.2e-87
AUS23773.1|5325116_5326694_+	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA	NA
AUS23774.1|5326885_5328136_+	DUF4102 domain-containing protein	NA	A0A1X9TCT6	Enterobacter_phage	84.4	5.8e-205
AUS23775.1|5328078_5328321_-	hypothetical protein	NA	NA	NA	NA	NA
AUS23776.1|5328317_5328911_-	adenine methylase	NA	T1SA14	Salmonella_phage	91.9	6.3e-109
AUS23777.1|5328907_5329570_-	hypothetical protein	NA	A0A059VF56	Pseudomonas_phage	46.6	1.2e-47
AUS23778.1|5329566_5329725_-	DUF1317 domain-containing protein	NA	T1SAR0	Salmonella_phage	78.8	1.1e-17
AUS23779.1|5329717_5330011_-	PerC family transcriptional regulator	NA	T1S9J5	Salmonella_phage	71.1	4.0e-32
AUS23780.1|5330120_5330369_-	AlpA family phage regulatory protein	NA	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	76.8	4.9e-31
AUS23781.1|5330417_5331299_-	recombinase RecT	NA	T1SBJ5	Salmonella_phage	84.3	8.9e-136
AUS23782.1|5331295_5332117_-	exodeoxyribonuclease VIII	NA	A0A193GYK2	Enterobacter_phage	80.2	1.8e-130
AUS23783.1|5332113_5332413_-	hypothetical protein	NA	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	54.5	2.1e-20
AUS23784.1|5332779_5333361_-	XRE family transcriptional regulator	NA	Q858D7	Salmonella_phage	64.3	7.1e-65
AUS23785.1|5333515_5333749_+	hypothetical protein	NA	T1SAR5	Salmonella_phage	66.2	9.2e-24
AUS23786.1|5333895_5334105_+	hypothetical protein	NA	A0A193GYW4	Enterobacter_phage	78.3	1.8e-26
AUS23787.1|5334104_5334872_+	primosomal protein	NA	A0A193GZ86	Enterobacter_phage	91.4	8.9e-140
AUS23788.1|5334868_5335654_+	replication protein	NA	A0A193GYX1	Enterobacter_phage	87.7	3.7e-133
AUS23789.1|5335773_5336121_+	DUF1064 domain-containing protein	NA	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	82.6	6.5e-50
AUS23790.1|5336313_5336724_+	hypothetical protein	NA	A0A2P1MXC5	Escherichia_phage	45.1	4.3e-16
AUS23791.1|5336707_5336899_+	hypothetical protein	NA	NA	NA	NA	NA
AUS23792.1|5336895_5337540_+	hypothetical protein	NA	Q1MVG0	Enterobacteria_phage	79.3	8.0e-110
AUS24046.1|5337833_5338301_+	hypothetical protein	NA	A0A2R2Z312	Escherichia_phage	51.7	1.3e-37
AUS23793.1|5338300_5338594_+	hypothetical protein	NA	Q6UAT9	Klebsiella_phage	86.6	2.7e-44
AUS23794.1|5338590_5339211_+	hypothetical protein	NA	Q1MVF7	Enterobacteria_phage	40.7	1.0e-29
AUS24048.1|5339210_5339414_+	hypothetical protein	NA	NA	NA	NA	NA
AUS23795.1|5339406_5339745_+	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	80.0	1.8e-44
AUS23796.1|5339841_5341326_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AUS23797.1|5341325_5341577_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24047.1|5341729_5341987_+	lF-82	NA	NA	NA	NA	NA
AUS24049.1|5342064_5342649_+|terminase	terminase small subunit	terminase	T1SBI8	Salmonella_phage	88.6	2.2e-90
AUS23798.1|5342645_5344121_+|terminase	terminase	terminase	Q858H3	Salmonella_phage	93.1	6.4e-280
AUS23799.1|5344164_5344536_-	hypothetical protein	NA	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	91.9	3.7e-59
AUS23800.1|5344585_5344828_+	hypothetical protein	NA	NA	NA	NA	NA
AUS23801.1|5345289_5345496_+	hypothetical protein	NA	T1SA67	Salmonella_phage	88.2	4.8e-08
AUS23802.1|5345510_5347193_+|tail	phage tail protein	tail	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	84.4	1.5e-264
AUS23803.1|5347189_5347486_+	hypothetical protein	NA	T1SBI9	Salmonella_phage	70.4	1.2e-33
AUS23804.1|5347488_5348169_+	peptidase	NA	G9L6C4	Escherichia_phage	84.0	6.1e-76
AUS23805.1|5348183_5349170_+	hypothetical protein	NA	A0A193GZ49	Enterobacter_phage	94.2	2.5e-179
AUS23806.1|5349223_5349661_+	hypothetical protein	NA	A0A193GYT9	Enterobacter_phage	91.7	1.3e-66
AUS23807.1|5349671_5350013_+	hypothetical protein	NA	G9L6C7	Escherichia_phage	70.8	2.4e-36
AUS23808.1|5350063_5350387_+	hypothetical protein	NA	G9L6C8	Escherichia_phage	85.0	5.3e-46
AUS23809.1|5350386_5350992_+	hypothetical protein	NA	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	77.0	4.0e-87
AUS23810.1|5350991_5353469_+	hypothetical protein	NA	Q858G3	Salmonella_phage	84.4	0.0e+00
AUS23811.1|5353468_5353933_+	hypothetical protein	NA	Q858G2	Salmonella_phage	81.2	1.5e-70
AUS23812.1|5353932_5354472_+	hypothetical protein	NA	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	80.0	8.0e-71
AUS23813.1|5354482_5357017_+	hypothetical protein	NA	Q858G0	Salmonella_phage	84.1	0.0e+00
AUS23814.1|5357016_5358927_+	hypothetical protein	NA	Q858F9	Salmonella_phage	82.7	5.4e-287
AUS23815.1|5358926_5361683_+	hypothetical protein	NA	Q858F8	Salmonella_phage	95.4	0.0e+00
AUS23816.1|5361679_5361874_+	hypothetical protein	NA	Q858F7	Salmonella_phage	67.2	6.5e-15
AUS23817.1|5361908_5362061_-	transmembrane anchored protein	NA	G9L6D9	Escherichia_phage	83.7	2.5e-14
AUS23818.1|5362159_5362456_-	hypothetical protein	NA	T1SA06	Salmonella_phage	63.9	6.9e-24
>prophage 1
CP025952	Klebsiella pneumoniae subsp. pneumoniae strain GD4 plasmid pKPGD4, complete sequence	170821	3143	52294	170821	transposase	Escherichia_phage(31.58%)	53	NA	NA
AUS24055.1|3143_3848_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUS24056.1|3881_9017_-	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA	NA
AUS24057.1|9016_11233_-	type IV conjugative transfer system coupling protein TraD	NA	NA	NA	NA	NA
AUS24058.1|11283_12087_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24059.1|12223_12958_-	complement resistance protein TraT	NA	NA	NA	NA	NA
AUS24060.1|12979_13501_-	protein traS	NA	NA	NA	NA	NA
AUS24061.1|13533_16350_-	conjugal transfer protein TraG	NA	NA	NA	NA	NA
AUS24062.1|16346_17720_-	conjugal transfer protein TraH	NA	NA	NA	NA	NA
AUS24063.1|17706_18099_-	conjugal transfer protein TrbF	NA	NA	NA	NA	NA
AUS24064.1|18052_18460_-	conjugal transfer protein TrbJ	NA	NA	NA	NA	NA
AUS24065.1|18356_18902_-	type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB	NA	NA	NA	NA	NA
AUS24066.1|18888_19170_-	type-F conjugative transfer system pilin chaperone TraQ	NA	NA	NA	NA	NA
AUS24067.1|19285_20059_-	type-F conjugative transfer system pilin assembly protein TraF	NA	NA	NA	NA	NA
AUS24068.1|20021_20282_-	oligopeptide ABC transporter permease OppC	NA	NA	NA	NA	NA
AUS24069.1|20305_22156_-	type-F conjugative transfer system mating-pair stabilization protein TraN	NA	NA	NA	NA	NA
AUS24070.1|22152_22575_-	HNH endonuclease	NA	C6ZR29	Salmonella_phage	86.8	9.4e-67
AUS24071.1|22600_22972_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24072.1|22968_23607_-	type-F conjugative transfer system pilin assembly protein TrbC	NA	NA	NA	NA	NA
AUS24073.1|23633_24155_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24074.1|24217_24526_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24075.1|24552_25545_-	conjugal transfer protein TraU	NA	NA	NA	NA	NA
AUS24076.1|25541_26174_-	protein TraW	NA	NA	NA	NA	NA
AUS24077.1|26170_26557_-	type-F conjugative transfer system protein TrbI	NA	NA	NA	NA	NA
AUS24078.1|26840_27545_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUS24079.1|27670_28045_-	hypothetical protein	NA	A0A248SL90	Klebsiella_phage	62.7	2.2e-27
AUS24080.1|28670_29030_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24081.1|29091_29415_-	theronine dehydrogenase	NA	I3UM57	Rhodobacter_phage	38.1	6.0e-13
AUS24082.1|29411_30140_-	psiA family protein	NA	NA	NA	NA	NA
AUS24083.1|30136_30568_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
AUS24084.1|32690_32921_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
AUS24085.1|33898_34159_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	46.2	4.1e-12
AUS24086.1|34345_34537_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24087.1|34579_35086_-	antirestriction protein	NA	A0A1I9S7Y0	Rhodococcus_phage	31.8	4.8e-09
AUS24088.1|35490_36270_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24089.1|36323_36743_-	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
AUS24090.1|36753_36975_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24091.1|36974_37652_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.9	1.6e-28
AUS24092.1|38010_38682_+	DNA breaking-rejoining protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	61.7	5.1e-83
AUS24093.1|38861_39284_+	peptidase	NA	A0A1W6JNS2	Morganella_phage	51.5	3.1e-30
AUS24094.1|39283_40555_+	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.0	6.1e-154
AUS24095.1|40690_41662_-	chromosome partitioning protein ParB	NA	Q1MVJ4	Enterobacteria_phage	68.9	1.4e-113
AUS24096.1|41658_42864_-	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	89.2	1.1e-205
AUS24097.1|43226_43859_+	LacI family DNA-binding transcriptional regulator	NA	A0A1V0E035	Clostridioides_phage	31.9	2.5e-07
AUS24098.1|43912_44113_+	hypothetical protein	NA	NA	NA	NA	NA
AUS24099.1|44259_45210_+|transposase	ISNCY family transposase	transposase	Q2A0A7	Sodalis_phage	55.6	6.6e-76
AUS24100.1|45206_45818_-	DUF2913 domain-containing protein	NA	NA	NA	NA	NA
AUS24244.1|45814_46210_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24101.1|46723_47704_+|transposase	IS5 family transposase ISKpn26	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
AUS24245.1|48355_48913_+	hypothetical protein	NA	NA	NA	NA	NA
AUS24102.1|49381_50086_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUS24103.1|50218_50860_-	type A-2 chloramphenicol O-acetyltransferase CatII	NA	G3CFL0	Escherichia_phage	45.9	7.3e-55
AUS24104.1|51009_51510_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24105.1|51589_52294_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
>prophage 2
CP025952	Klebsiella pneumoniae subsp. pneumoniae strain GD4 plasmid pKPGD4, complete sequence	170821	91600	160607	170821	transposase,protease,integrase	Escherichia_phage(37.93%)	83	114902:114961	166601:167407
AUS24156.1|91600_92305_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUS24157.1|92338_92830_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24158.1|92936_93674_+	resolvase	NA	NA	NA	NA	NA
AUS24159.1|93670_93895_+	hypothetical protein	NA	NA	NA	NA	NA
AUS24160.1|94016_94193_+	DUF4102 domain-containing protein	NA	T1S9J3	Salmonella_phage	68.6	1.0e-06
AUS24161.1|94374_95379_-|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
AUS24162.1|95457_98424_-|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	72.8	0.0e+00
AUS24163.1|98544_99249_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUS24164.1|99493_100240_+	conjugal transfer pilus acetylase TraX	NA	A0A077JBM8	Xanthomonas_phage	30.9	4.2e-09
AUS24165.1|100294_100855_+	conjugal transfer protein	NA	NA	NA	NA	NA
AUS24166.1|100986_101187_+	hypothetical protein	NA	NA	NA	NA	NA
AUS24167.1|101572_102172_+	hypothetical protein	NA	NA	NA	NA	NA
AUS24168.1|102335_102566_+	hypothetical protein	NA	NA	NA	NA	NA
AUS24169.1|102870_103020_+	Hok/Gef family protein	NA	NA	NA	NA	NA
AUS24170.1|103303_103552_+	replication protein	NA	NA	NA	NA	NA
AUS24171.1|103552_103762_-	replication protein RepA	NA	NA	NA	NA	NA
AUS24254.1|103796_103871_+	RepA leader peptide Tap	NA	NA	NA	NA	NA
AUS24172.1|103851_104721_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA	NA
AUS24173.1|105083_105470_+	hypothetical protein	NA	NA	NA	NA	NA
AUS24174.1|105659_106313_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AUS24175.1|106532_106997_+	mRNA interferase PemK	NA	NA	NA	NA	NA
AUS24176.1|106993_107098_+	hypothetical protein	NA	NA	NA	NA	NA
AUS24177.1|108305_109010_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUS24178.1|109520_110396_+	class A extended-spectrum beta-lactamase CTX-M-65	NA	A0A1B0VBP7	Salmonella_phage	98.9	6.8e-152
AUS24179.1|110430_111399_+|transposase	IS5-like element IS903B family transposase	transposase	A0A1B0VFY5	Salmonella_phage	100.0	1.6e-186
AUS24180.1|113149_113854_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
114902:114961	attL	GGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTTTTGCTGATGGAGCTG	NA	NA	NA	NA
AUS24181.1|114964_115669_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUS24182.1|115734_116253_+	hypothetical protein	NA	NA	NA	NA	NA
AUS24183.1|116257_116674_-	fosfomycin resistance glutathione transferase FosA3	NA	Q2LI91	Bacillus_phage	35.6	2.0e-08
AUS24184.1|117059_117764_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AUS24185.1|118441_118630_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24255.1|118721_119258_+	recombinase	NA	Q1MVP4	Enterobacteria_phage	100.0	2.8e-84
AUS24186.1|119440_120301_+	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
AUS24187.1|120470_121226_+	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA	NA
AUS24188.1|121675_122380_-|transposase	IS6 family transposase IS15DI	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
AUS24189.1|122576_122894_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24190.1|122908_123259_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24191.1|123255_123528_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24256.1|124220_124379_-	Hok/Gef family protein	NA	NA	NA	NA	NA
AUS24192.1|124606_124981_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24193.1|125036_125363_-	theronine dehydrogenase	NA	NA	NA	NA	NA
AUS24194.1|125359_126088_-	plasmid SOS inhibition protein A	NA	NA	NA	NA	NA
AUS24195.1|126084_126516_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
AUS24196.1|126560_128618_-	hypothetical protein	NA	G8DH78	Emiliania_huxleyi_virus	25.4	1.2e-21
AUS24197.1|128687_128936_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
AUS24198.1|128984_129527_-	single-stranded DNA-binding protein	NA	A0A0A0P1Q9	Enterobacteria_phage	76.7	4.6e-50
AUS24257.1|130144_130465_+	hypothetical protein	NA	NA	NA	NA	NA
AUS24199.1|130359_130923_-	SAM-dependent methyltransferase	NA	A0A2I7RHK4	Vibrio_phage	34.3	7.4e-19
AUS24200.1|130970_132326_-	DUF3560 domain-containing protein	NA	NA	NA	NA	NA
AUS24201.1|132377_132608_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24202.1|132699_132927_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24203.1|133605_133926_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24204.1|133960_134215_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	48.8	4.0e-12
AUS24205.1|134402_134594_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24206.1|134636_135143_-	antirestriction protein	NA	G9FHQ1	Rhodococcus_virus	31.4	1.2e-07
AUS24207.1|135185_135614_-	antirestriction protein	NA	NA	NA	NA	NA
AUS24208.1|136294_137062_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24209.1|137115_137535_-	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
AUS24210.1|137544_137766_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24211.1|137765_138467_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.2	1.6e-26
AUS24212.1|138903_139134_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24213.1|139196_139868_-	Mediator of plasmid stability	NA	NA	NA	NA	NA
AUS24214.1|139870_140842_-	mediator of plasmid stability	NA	A0A222YXF2	Escherichia_phage	46.8	1.1e-73
AUS24215.1|141090_142575_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
AUS24216.1|142574_142826_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24217.1|142985_143417_+	peptidase	NA	A0A1W6JNS2	Morganella_phage	53.3	2.1e-29
AUS24218.1|143416_144688_+	DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.7	7.5e-152
AUS24219.1|144769_145747_-	chromosome partitioning protein ParB	NA	Q38420	Escherichia_phage	53.8	1.4e-86
AUS24220.1|145743_146949_-	ParA family protein	NA	A0A077SL49	Escherichia_phage	69.3	5.3e-163
AUS24221.1|148058_148925_-	RepB family plasmid replication initiator protein	NA	A0A222YYK1	Escherichia_phage	31.1	1.5e-23
AUS24222.1|149702_149960_+	hypothetical protein	NA	NA	NA	NA	NA
AUS24223.1|150005_150785_-|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	92.0	5.4e-52
AUS24224.1|150968_151973_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24225.1|152002_152206_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24226.1|152251_152773_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24258.1|152830_153181_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24227.1|153259_154204_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24259.1|154364_154799_-	hypothetical protein	NA	NA	NA	NA	NA
AUS24228.1|154782_155013_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
AUS24229.1|155009_155426_+	PIN domain nuclease	NA	NA	NA	NA	NA
AUS24230.1|155499_157062_+	ATP-dependent endonuclease	NA	NA	NA	NA	NA
AUS24231.1|157046_158069_+	DNA helicase UvrD	NA	NA	NA	NA	NA
AUS24232.1|159602_160607_-|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
166601:167407	attR	GGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTTTTGCTGATGGAGCTGCACATGAACCCATTCAAAGGCCGGCATTTTCAGCGTGACATCATTCTGTGGGCCGTACGCTGGTACTGCAAATACGGCATCAGTTACCGTGAGCTGCAGGAGATGCTGGCTGAACGCGGAGTGAATGTCGATCACTCCACGATTTACCGCTGGGTTCAGCGTTATGCGCCTGAAATGGAAAAACGGCTGCGCTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATGGATGAAACCTACGTGAAGGTCAATGGCCGCTGGGCGTATCTGTACCGGGCCGTCGACAGCCGGGGCCGCACTGTCGATTTTTATCTCTCCTCCCGTCGTAACAGCAAAGCTGCATACCGGTTTCTGGGTAAAATCCTCAACAACGTGAAGAAGTGGCAGATCCCGCGATTCATCAACACGGATAAAGCGCCCGCCTATGGTCGCGCGCTTGCTCTGCTCAAACGCGAAGGCCGGTGCCCGTCTGACGTTGAACACCGACAGATTAAGTACCGGAACAACGTGATTGAATGCGATCATGGCAAACTGAAACGGATAATCGGCGCCACGCTGGGATTTAAATCCATGAAGACGGCTTACGCCACCATCAAAGGTATTGAGGTGATGCGTGCACTACGCAAAGGCCAGGCCTCAGCATTTTATTATGGTGATCCCCTGGGCGAAATGCGCCTGGTAAGCAGAGTTTTTGAAATGTAAGGCCTTTGAATAAGACAAAAGGCTGCCTCATCGCTAACT	NA	NA	NA	NA
