The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025931	Porphyromonas gingivalis strain TDC 60 chromosome, complete genome	2334880	275898	361267	2334880	tRNA,transposase,protease,integrase	Ralstonia_phage(15.38%)	54	337751:337767	366995:367011
AUR47896.1|275898_276984_+|transposase	transposase in ISPg8	transposase	A0A077K814	Ralstonia_phage	28.4	5.8e-20
AUR47584.1|277909_279319_+|protease	t9SS C-terminal target domain-containing protease	protease	NA	NA	NA	NA
AUR48380.1|279720_280407_+	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
AUR48651.1|280425_280911_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
AUR47854.1|281726_282857_+|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	43.7	1.3e-78
AUR47911.1|282873_283956_+	lipopolysaccharide export system permease	NA	NA	NA	NA	NA
AUR48691.1|283988_284450_+	tmRNA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	44.7	6.1e-27
AUR47330.1|284489_286661_+	dipeptidyl aminopeptidase 4	NA	NA	NA	NA	NA
AUR48184.1|286764_287613_+	lipoyl synthase	NA	NA	NA	NA	NA
AUR47322.1|287865_290076_+	gingipain R2 hemagglutinin	NA	NA	NA	NA	NA
AUR48493.1|290656_291259_-	phosphoserine phosphatase	NA	NA	NA	NA	NA
AUR48171.1|291248_292109_-	decaprenyl-phosphate phosphoribosyltransferase	NA	NA	NA	NA	NA
AUR48702.1|292125_292581_-	endoribonuclease metalloprotein	NA	NA	NA	NA	NA
AUR47757.1|292616_293849_-	spore maturation protein A	NA	NA	NA	NA	NA
AUR48555.1|293868_294435_-	guanylate kinase	NA	K4JYM5	Abalone_herpesvirus	37.0	1.8e-17
AUR48133.1|294467_295358_-	protein that may play a role in stationary phase survival	NA	NA	NA	NA	NA
AUR47213.1|295449_298791_-	protein translocase subunit	NA	NA	NA	NA	NA
AUR47479.1|298884_300480_-	alkaline phosphatase	NA	NA	NA	NA	NA
AUR47745.1|300458_301706_-	hypothetical protein	NA	NA	NA	NA	NA
AUR47224.1|301736_304760_-	ATP-dependent helicase subunit B	NA	NA	NA	NA	NA
AUR48334.1|304735_305461_-|protease	metal-dependent inner membrane protease abortive phage infection protein	protease	NA	NA	NA	NA
AUR47469.1|306139_307777_-	60 kDa chaperonin	NA	A0A240F779	uncultured_virus	64.7	1.2e-189
AUR48879.1|307815_308085_-	10 kDa chaperonin	NA	A0A221S3C8	uncultured_virus	56.3	4.2e-20
AUR48102.1|308301_309210_-|tRNA	tRNA dimethylallyltransferase	tRNA	NA	NA	NA	NA
AUR47530.1|309206_310703_-	inosine-5'-monophosphate dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	33.7	2.6e-58
AUR47474.1|311357_312977_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	47.4	5.3e-134
AUR47399.1|313103_314987_+	membrane insertase	NA	NA	NA	NA	NA
AUR47400.1|315077_316961_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	22.6	3.5e-12
AUR47919.1|316994_318068_+	carbamoyl-phosphate synthase small chain	NA	NA	NA	NA	NA
AUR47215.1|318086_321314_+	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA	NA
AUR47388.1|321508_323452_-	glutamine-dependent NAD(+) synthetase	NA	NA	NA	NA	NA
AUR48185.1|323561_324410_-	vancomycin B-type resistance protein	NA	NA	NA	NA	NA
AUR47281.1|325604_328088_+	tonB-dependent receptor putative ferric aerobactin receptor	NA	NA	NA	NA	NA
AUR48468.1|328268_328889_-	outer membrane protein	NA	NA	NA	NA	NA
AUR48922.1|328921_329137_-	putative periplasmic	NA	NA	NA	NA	NA
AUR47549.1|329217_330678_+	aminoacyl-histidine dipeptidase	NA	NA	NA	NA	NA
AUR47598.1|331594_332983_+	outer membrane protein TolC Type I secretion system	NA	NA	NA	NA	NA
AUR47929.1|333017_334079_+	multidrug resistance protein	NA	NA	NA	NA	NA
AUR47219.1|334075_337225_+	multidrug resistance protein	NA	S5VTK5	Leptospira_phage	26.0	3.9e-101
AUR48869.1|337221_337509_+	hypothetical protein	NA	NA	NA	NA	NA
337751:337767	attL	AGATATTGCTGTCCGGT	NA	NA	NA	NA
AUR47897.1|337940_339026_-|transposase	transposase in ISPg8	transposase	A0A077K814	Ralstonia_phage	28.4	5.8e-20
AUR48393.1|339267_339942_+|integrase	integrase DNA breaking-rejoining enzyme	integrase	H7BUI8	unidentified_phage	35.0	6.4e-17
AUR48328.1|340056_340788_-	abortive phage resistance protein AbiGi antitoxin	NA	NA	NA	NA	NA
AUR47805.1|342045_343227_+	ATPase component of energizing module of biotin ECF transporter	NA	NA	NA	NA	NA
AUR47205.1|343415_346997_+	pyruvate synthase pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA	NA
AUR47237.1|348005_350828_-	lysyl endopeptidase	NA	NA	NA	NA	NA
AUR48622.1|351353_351872_-	Nucleoid-associated protein	NA	NA	NA	NA	NA
AUR47672.1|352562_353876_+	hypothetical protein	NA	NA	NA	NA	NA
AUR48586.1|354077_354623_+	hypothetical protein	NA	NA	NA	NA	NA
AUR48209.1|355155_355977_-	purine nucleoside phosphorylase 1	NA	Q5YBA4	Grouper_iridovirus	41.2	7.5e-52
AUR47718.1|355996_357271_-	5-methylthioadenosine/S-adenosylhomocysteine deaminase	NA	NA	NA	NA	NA
AUR47623.1|357345_358701_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AUR47454.1|358917_360594_+	aspartate/alanine antiporter cobalt transporter	NA	NA	NA	NA	NA
AUR48772.1|360871_361267_-|integrase	integrase	integrase	NA	NA	NA	NA
366995:367011	attR	AGATATTGCTGTCCGGT	NA	NA	NA	NA
>prophage 2
CP025931	Porphyromonas gingivalis strain TDC 60 chromosome, complete genome	2334880	628107	685056	2334880	bacteriocin,transposase,integrase	Bacillus_phage(16.67%)	46	610650:610665	692479:692494
610650:610665	attL	AGCTCCTCAAGGGGGG	NA	NA	NA	NA
AUR47688.1|628107_629406_-|integrase	integrase	integrase	S0A3I4	Cellulophaga_phage	28.7	1.2e-19
AUR47701.1|629886_631179_+|integrase	integrase	integrase	H7BUI8	unidentified_phage	33.8	2.9e-34
AUR48704.1|631175_631631_+	hypothetical protein	NA	NA	NA	NA	NA
AUR48884.1|632341_632611_+	DNA-binding helix-turn-helix regulator	NA	NA	NA	NA	NA
AUR48858.1|632631_632937_+	DNA-binding helix-turn-helix regulator	NA	NA	NA	NA	NA
AUR48667.1|632933_633410_+	hypothetical protein	NA	NA	NA	NA	NA
AUR48232.1|634016_634820_-|integrase	integrase	integrase	A0A0H4TI16	Erysipelothrix_phage	26.2	3.1e-18
AUR47727.1|634914_636183_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
AUR47490.1|636177_637740_-	type I restriction endonuclease	NA	E3T4D5	Cafeteria_roenbergensis_virus	26.1	2.9e-12
AUR48659.1|637736_638216_-	death-on-curing family protein	NA	NA	NA	NA	NA
AUR47984.1|638208_639225_-	DNA-binding protein	NA	A0A0S2SXZ1	Bacillus_phage	28.4	1.7e-13
AUR47522.1|639236_640745_-	type I restriction endonuclease subunit M	NA	A0A2H4UVW8	Bodo_saltans_virus	24.6	8.4e-17
AUR47289.1|640748_643136_-	DEAD/DEAH box helicase	NA	A0A097BY72	Enterococcus_phage	27.3	1.2e-20
AUR48927.1|643205_643409_-	transcriptional regulator	NA	NA	NA	NA	NA
AUR47209.1|643668_647082_-	Adenine-specific DNA methylase	NA	A0A248SL14	Klebsiella_phage	30.9	1.2e-90
AUR47311.1|647081_649361_-	DNA methylase	NA	NA	NA	NA	NA
AUR47346.1|649366_651460_-	DNA topoisomerase III	NA	A0A076FM50	Aureococcus_anophage	22.6	1.1e-11
AUR47583.1|651548_652958_-	hypothetical protein	NA	NA	NA	NA	NA
AUR48000.1|653811_654822_+	ATP-GRASP peptide maturase grasp-with-spasm system	NA	S5VKI3	Leptospira_phage	29.8	7.3e-17
AUR47734.1|654875_656135_+	SPASM domain peptide maturase grasp-with-spasm system	NA	NA	NA	NA	NA
AUR47295.1|656147_658493_+	porin	NA	NA	NA	NA	NA
AUR47321.1|658523_660737_+|bacteriocin	ABC-type bacteriocin/lantibiotic exporter	bacteriocin	W8CYL7	Bacillus_phage	27.4	1.4e-31
AUR48647.1|660738_661227_+	tellurite-resistance/dicarboxylate transporter	NA	NA	NA	NA	NA
AUR48508.1|661419_662016_-	tonB-dependent receptor	NA	NA	NA	NA	NA
AUR48841.1|661975_662302_-	porin	NA	NA	NA	NA	NA
AUR47580.1|662276_663692_-	peptidase	NA	NA	NA	NA	NA
AUR47589.1|663778_665179_-	anaerobic sulfatase-maturase	NA	NA	NA	NA	NA
AUR47378.1|667188_669174_-	conjugative transposon protein TraG	NA	NA	NA	NA	NA
AUR47715.1|669175_670456_-	relaxase/mobilization nuclease	NA	NA	NA	NA	NA
AUR48769.1|670440_670842_-	mobilization protein	NA	NA	NA	NA	NA
AUR48226.1|671472_672282_+	conjugative transposon protein TraA chromosome-partitioning ATPase	NA	NA	NA	NA	NA
AUR48783.1|672268_672655_+	conjugal transfer protein TraC	NA	NA	NA	NA	NA
AUR48360.1|672659_673364_+	conjugative transposon protein TraD	NA	NA	NA	NA	NA
AUR48860.1|673552_673855_+	conjugative transposon protein TraE	NA	NA	NA	NA	NA
AUR48831.1|673858_674194_+	conjugative transposon protein TraF	NA	NA	NA	NA	NA
AUR47273.1|674190_676716_+	conjugative transposon protein TraG	NA	NA	NA	NA	NA
AUR48453.1|676743_677373_+	conjugative transposon protein TraI	NA	NA	NA	NA	NA
AUR47954.1|677495_678536_+	conjugative transposon protein TraJ	NA	NA	NA	NA	NA
AUR48462.1|678547_679171_+	conjugative transposon protein TraK	NA	NA	NA	NA	NA
AUR48870.1|679167_679455_+	inner membrane protein	NA	NA	NA	NA	NA
AUR47619.1|679444_680806_+	conjugative transposon protein TraM	NA	NA	NA	NA	NA
AUR47967.1|680828_681854_+	conjugative transposon protein TraN	NA	NA	NA	NA	NA
AUR48536.1|681847_682426_+	conjugative transposon protein TraO	NA	NA	NA	NA	NA
AUR48681.1|682435_682903_+	conjugative transposon protein TraQ	NA	NA	NA	NA	NA
AUR47898.1|683419_684505_+|transposase	transposase in ISPg8	transposase	A0A077K814	Ralstonia_phage	28.1	9.9e-20
AUR48801.1|684678_685056_+|integrase	integrase-like protein	integrase	NA	NA	NA	NA
692479:692494	attR	AGCTCCTCAAGGGGGG	NA	NA	NA	NA
>prophage 3
CP025931	Porphyromonas gingivalis strain TDC 60 chromosome, complete genome	2334880	691366	756784	2334880	transposase,protease,integrase	Ralstonia_phage(25.0%)	53	699405:699420	742555:742570
AUR47916.1|691366_692446_+|transposase	transposase in ISPg8	transposase	A0A077K814	Ralstonia_phage	26.5	1.0e-16
AUR48686.1|692606_693071_+	conjugative transposon protein TraQ	NA	NA	NA	NA	NA
AUR48429.1|693101_693749_-	Bacterial PH domain protein	NA	NA	NA	NA	NA
AUR48682.1|693783_694251_-	Bacterial PH domain protein	NA	A0A2H5BNL9	Klebsiella_phage	31.1	5.8e-09
AUR47629.1|694355_695708_-|transposase	transposase IS4 family	transposase	NA	NA	NA	NA
AUR48626.1|695821_696334_-	hypothetical protein	NA	NA	NA	NA	NA
AUR48472.1|696374_696989_-	27-O-demethylrifamycin SV methyltransferase	NA	NA	NA	NA	NA
AUR48547.1|697003_697576_-	Protein-S-isoprenylcysteine O-methyltransferase	NA	NA	NA	NA	NA
AUR48438.1|697572_698217_-	inner membrane protein	NA	NA	NA	NA	NA
AUR48872.1|698828_699110_-	hypothetical protein	NA	NA	NA	NA	NA
AUR48913.1|699132_699360_-	5-hydroxytryptamine receptor 2	NA	NA	NA	NA	NA
AUR48617.1|699372_699894_-	hypothetical protein	NA	NA	NA	NA	NA
699405:699420	attL	TACAGAAAGAGCCTGT	NA	NA	NA	NA
AUR48809.1|699900_700260_-	hypothetical protein	NA	NA	NA	NA	NA
AUR48696.1|700617_701076_-	hypothetical protein	NA	NA	NA	NA	NA
AUR48606.1|701102_701636_-	DNA-binding protein	NA	NA	NA	NA	NA
AUR47758.1|701671_702904_-|integrase	bacteriophage integrase	integrase	H7BUI8	unidentified_phage	38.1	4.4e-32
AUR48402.1|703516_704185_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AUR48931.1|704181_704376_-	exodeoxyribonuclease 7 small subunit	NA	NA	NA	NA	NA
AUR47406.1|704710_706573_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AUR48386.1|706585_707269_+	response regulator protein	NA	NA	NA	NA	NA
AUR48381.1|707454_708141_+	tetratricopeptide repeat-containing protein	NA	NA	NA	NA	NA
AUR48652.1|708232_708718_+	67-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	42.9	9.9e-28
AUR47272.1|708858_711390_+|protease	thiol protease hemagglutinin precursor	protease	NA	NA	NA	NA
AUR47457.1|712515_714186_+	peptidylarginine deiminase	NA	NA	NA	NA	NA
AUR47528.1|714440_715943_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
AUR48944.1|716278_716449_+	ferredoxin	NA	NA	NA	NA	NA
AUR47417.1|716885_718694_-	DNA polymerase III subunit tau	NA	A0A1U9WR94	Streptococcus_virus	39.1	6.1e-46
AUR47466.1|718816_720463_-	fumarate hydratase	NA	NA	NA	NA	NA
AUR48909.1|720531_720762_-	hypothetical protein	NA	NA	NA	NA	NA
AUR48063.1|720758_721700_-	nitronate monooxygenase	NA	NA	NA	NA	NA
AUR47259.1|722132_724736_-	ferric enterobactin receptor	NA	NA	NA	NA	NA
AUR47452.1|726648_728328_+	aspartate/alanine antiporter cobalt transporter	NA	NA	NA	NA	NA
AUR48618.1|728417_728936_+	putative Met_synt_B12 super family	NA	NA	NA	NA	NA
AUR48044.1|728932_729898_-	cadmium cobalt and zinc/H(+)-K(+) antiporter	NA	NA	NA	NA	NA
AUR48308.1|729953_730697_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AUR47235.1|731161_734017_+	LPS-assembly organic solvent tolerance protein	NA	NA	NA	NA	NA
AUR48336.1|734043_734766_+|protease	rhomboid protease membrane protein of glp regulon	protease	NA	NA	NA	NA
AUR48096.1|734749_735664_+	GlpG membrane protein of glp regulon	NA	NA	NA	NA	NA
AUR47844.1|735660_736806_+	endonuclease	NA	NA	NA	NA	NA
AUR47605.1|737058_738438_+	tryptophanase	NA	NA	NA	NA	NA
AUR47899.1|739516_740602_+|transposase	transposase in ISPg8	transposase	A0A077K814	Ralstonia_phage	28.1	5.8e-20
AUR47517.1|741524_743042_+	phosphoribosylaminoimidazolecarboxamide formyltransferase	NA	Q58MG4	Prochlorococcus_phage	41.6	5.1e-54
742555:742570	attR	TACAGAAAGAGCCTGT	NA	NA	NA	NA
AUR47976.1|743144_744164_+	rod shape-determining protein	NA	NA	NA	NA	NA
AUR48139.1|744200_745088_+	cell shape-determining protein	NA	NA	NA	NA	NA
AUR48619.1|745087_745606_+	rod shape-determining protein	NA	NA	NA	NA	NA
AUR47405.1|745598_747464_+	penicillin-binding protein 2	NA	NA	NA	NA	NA
AUR47553.1|747453_748911_+	rod shape-determining protein	NA	NA	NA	NA	NA
AUR47777.1|748938_750150_-	hypothetical protein	NA	NA	NA	NA	NA
AUR48697.1|750587_751046_+	Nucleoid-associated protein	NA	NA	NA	NA	NA
AUR48352.1|751110_751821_+	hypothetical protein	NA	NA	NA	NA	NA
AUR48087.1|751857_752784_+	outer membrane hypothetical protein	NA	NA	NA	NA	NA
AUR47264.1|752968_755548_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.7	4.2e-109
AUR47781.1|755581_756784_+|protease	Beta-barrel assembly-enhancing protease	protease	NA	NA	NA	NA
