The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025606	Mycobacterium tuberculosis strain GG-137-10 chromosome, complete genome	4411446	1125411	1177212	4411446	protease,tRNA,transposase,integrase	Klosneuvirus(20.0%)	54	1133234:1133250	1182292:1182308
AUQ11634.1|1125411_1126971_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	39.2	2.8e-100
AUQ14426.1|1127056_1127851_+	YchF/TatD family DNA exonuclease	NA	NA	NA	NA	NA
AUQ11635.1|1128058_1129147_+	resuscitation-promoting factor RpfB	NA	Q856D9	Mycobacterium_phage	59.4	8.2e-22
AUQ11636.1|1129119_1130073_+	ribosomal RNA small subunit methyltransferase A	NA	NA	NA	NA	NA
AUQ14427.1|1130158_1131079_+	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
AUQ11637.1|1131095_1131389_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ14428.1|1131348_1131648_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ11638.1|1131592_1133227_+	polyketide synthase	NA	NA	NA	NA	NA
1133234:1133250	attL	CGAGCAGACGCAAAATC	NA	NA	NA	NA
AUQ11639.1|1133300_1133876_-|tRNA	peptidyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AUQ11640.1|1133888_1134536_-	50S ribosomal protein L25	NA	NA	NA	NA	NA
AUQ11641.1|1134752_1135433_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ11642.1|1135468_1136449_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	32.7	1.8e-44
AUQ11643.1|1136540_1138028_-	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	NA	NA	NA	NA	NA
AUQ14429.1|1138282_1138876_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AUQ11644.1|1138934_1142639_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
AUQ11645.1|1142638_1143616_+	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
AUQ11646.1|1143703_1144435_+	murein transglycosylase B	NA	NA	NA	NA	NA
AUQ11647.1|1144531_1145821_+	enolase	NA	W6LP63	Streptococcus_phage	56.6	2.1e-133
AUQ11648.1|1145825_1146512_+	septation inhibitor protein	NA	NA	NA	NA	NA
AUQ14430.1|1146528_1146996_+	DUF501 domain-containing protein	NA	NA	NA	NA	NA
AUQ11649.1|1146986_1147946_+	exopolyphosphatase	NA	NA	NA	NA	NA
AUQ11650.1|1148185_1148398_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ11651.1|1148394_1149075_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	30.6	4.2e-24
AUQ11652.1|1149071_1151654_-	sensor protein KdpD	NA	NA	NA	NA	NA
AUQ11653.1|1151744_1151891_+	potassium transporter Trk	NA	NA	NA	NA	NA
AUQ14431.1|1151887_1151980_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
AUQ11654.1|1151979_1153695_+	potassium-transporting ATPase A chain	NA	NA	NA	NA	NA
AUQ11655.1|1153691_1155821_+	potassium-transporting ATPase subunit B	NA	M1HRW9	Paramecium_bursaria_Chlorella_virus	26.2	3.8e-23
AUQ11656.1|1155820_1156390_+	potassium-transporting ATPase subunit C	NA	NA	NA	NA	NA
AUQ11657.1|1156393_1157923_-	sensor histidine kinase	NA	NA	NA	NA	NA
AUQ11658.1|1157930_1158704_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	36.3	2.3e-34
AUQ11659.1|1160511_1160796_-	ESAT-6-like protein EsxI	NA	NA	NA	NA	NA
AUQ11660.1|1160822_1161119_-	WXG100 family type VII secretion target	NA	NA	NA	NA	NA
AUQ11661.1|1161264_1162440_-	PPE family protein	NA	NA	NA	NA	NA
AUQ11662.1|1162516_1163344_-	PE family protein	NA	NA	NA	NA	NA
AUQ11663.1|1163904_1164153_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ11664.1|1164131_1164371_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ11665.1|1164276_1164495_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ14432.1|1164539_1165022_-|transposase	IS5 family transposase	transposase	A0A1V0SLQ8	Klosneuvirus	28.7	8.1e-06
AUQ11666.1|1165059_1165458_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AUQ14433.1|1165749_1166775_-|protease	serine protease	protease	NA	NA	NA	NA
AUQ11667.1|1167021_1167645_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ11668.1|1167641_1168523_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ11669.1|1168604_1169393_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ11670.1|1169392_1170640_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	45.1	3.1e-81
AUQ11671.1|1171007_1172123_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ11672.1|1172079_1172283_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ11673.1|1172355_1172802_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AUQ14434.1|1172850_1173756_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AUQ11674.1|1173914_1174670_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AUQ14435.1|1174964_1175591_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ11675.1|1175657_1175840_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ11676.1|1176535_1176874_+|integrase	integrase	integrase	NA	NA	NA	NA
AUQ11677.1|1176897_1177212_+|integrase	integrase	integrase	Q854H9	Mycobacterium_phage	53.6	1.0e-09
1182292:1182308	attR	CGAGCAGACGCAAAATC	NA	NA	NA	NA
>prophage 2
CP025606	Mycobacterium tuberculosis strain GG-137-10 chromosome, complete genome	4411446	2941159	2976525	4411446	protease,tRNA,capsid,terminase,transposase,head,integrase	Tupanvirus(11.11%)	42	2969960:2969987	2980942:2980969
AUQ13135.1|2941159_2943238_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
AUQ13136.1|2943346_2943574_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ14629.1|2943570_2944956_-	PE family protein	NA	NA	NA	NA	NA
AUQ13137.1|2945300_2945801_+	DUF1990 domain-containing protein	NA	NA	NA	NA	NA
AUQ13138.1|2945817_2946258_-	DoxX family membrane protein	NA	NA	NA	NA	NA
AUQ14630.1|2946404_2947082_+	transcriptional regulator	NA	NA	NA	NA	NA
AUQ13139.1|2947066_2947420_-	cupin domain-containing protein	NA	NA	NA	NA	NA
AUQ13140.1|2947432_2947858_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ13141.1|2947854_2948529_-	transcriptional regulator	NA	NA	NA	NA	NA
AUQ13142.1|2948606_2949428_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AUQ13143.1|2949563_2950457_+	universal stress protein	NA	NA	NA	NA	NA
AUQ14631.1|2950459_2951278_-	universal stress protein	NA	NA	NA	NA	NA
AUQ13144.1|2951292_2952474_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
AUQ13145.1|2952532_2952964_-	hypoxic response protein 1	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
AUQ13146.1|2953477_2954719_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AUQ14632.1|2955028_2955391_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ13147.1|2955737_2956862_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ13148.1|2956863_2957403_+	archease	NA	NA	NA	NA	NA
AUQ13149.1|2957542_2958841_+	RNA-splicing ligase RtcB	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
AUQ13150.1|2958879_2959161_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
AUQ13151.1|2959305_2959791_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
AUQ13152.1|2959817_2960075_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ13153.1|2960075_2962412_-	PE family protein	NA	NA	NA	NA	NA
AUQ13154.1|2962440_2962683_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ13155.1|2962683_2963361_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ13156.1|2963556_2964213_+	DedA family protein	NA	NA	NA	NA	NA
AUQ13157.1|2964375_2964822_+	STAS domain-containing protein	NA	NA	NA	NA	NA
AUQ13158.1|2964996_2965329_-	YnfA family protein	NA	NA	NA	NA	NA
AUQ13159.1|2965448_2965808_-	transcriptional regulator	NA	NA	NA	NA	NA
AUQ13160.1|2965909_2966368_+	cadmium-induced protein CadI	NA	NA	NA	NA	NA
AUQ13161.1|2966503_2966884_+	transcriptional regulator	NA	NA	NA	NA	NA
AUQ13162.1|2966880_2968377_+	arsenical-resistance protein	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
AUQ14633.1|2968566_2968803_+	DUF3018 domain-containing protein	NA	NA	NA	NA	NA
AUQ13163.1|2968875_2969049_+	hypothetical protein	NA	NA	NA	NA	NA
2969960:2969987	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
AUQ13164.1|2970093_2970525_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ13165.1|2970521_2971520_+|integrase	integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
AUQ13166.1|2971533_2971998_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ13167.1|2971985_2972174_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ13168.1|2972130_2973391_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
AUQ13169.1|2973765_2975205_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
AUQ14634.1|2975212_2975746_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
AUQ13170.1|2975898_2976525_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
2980942:2980969	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 3
CP025606	Mycobacterium tuberculosis strain GG-137-10 chromosome, complete genome	4411446	3710414	3796343	4411446	tRNA,transposase	Burkholderia_virus(28.57%)	57	NA	NA
AUQ13776.1|3710414_3711675_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
AUQ13777.1|3711913_3713443_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AUQ14739.1|3713375_3714314_-	RNA polymerase sigma factor SigJ	NA	NA	NA	NA	NA
AUQ13778.1|3714322_3715690_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
AUQ13779.1|3715758_3716976_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
AUQ13780.1|3717071_3718580_+	MFS transporter	NA	NA	NA	NA	NA
AUQ13781.1|3718576_3719728_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
AUQ13782.1|3719918_3720764_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
AUQ14740.1|3720740_3721220_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ13783.1|3721238_3721679_+	Zn(2+)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AUQ13784.1|3721712_3722582_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
AUQ13785.1|3722602_3723613_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
AUQ13786.1|3723897_3724530_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AUQ13787.1|3724596_3725826_-	isocitrate dehydrogenase (NADP(+))	NA	NA	NA	NA	NA
AUQ13788.1|3726108_3727458_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
AUQ13789.1|3727469_3728609_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AUQ14741.1|3728605_3729337_+	methyltransferase	NA	NA	NA	NA	NA
AUQ13790.1|3729345_3736917_-	PPE family protein	NA	NA	NA	NA	NA
AUQ13791.1|3743170_3743428_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
AUQ13792.1|3743683_3753157_-	PPE family protein	NA	NA	NA	NA	NA
AUQ14743.1|3753194_3753686_-	hypothetical protein	NA	NA	NA	NA	NA
AUQ14742.1|3753782_3754229_+|transposase	transposase	transposase	NA	NA	NA	NA
AUQ13793.1|3754265_3755084_-|transposase	transposase	transposase	NA	NA	NA	NA
AUQ13794.1|3755300_3755537_-|transposase	transposase	transposase	NA	NA	NA	NA
AUQ13795.1|3755924_3767075_-	PPE family protein	NA	NA	NA	NA	NA
AUQ13796.1|3767318_3768113_-	oxidoreductase	NA	NA	NA	NA	NA
AUQ13797.1|3768194_3768566_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
AUQ13798.1|3768463_3768874_-	FAD-binding protein	NA	NA	NA	NA	NA
AUQ14744.1|3768708_3768969_-	oxidoreductase	NA	NA	NA	NA	NA
AUQ13799.1|3769083_3769473_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
AUQ13800.1|3769486_3769780_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
AUQ13801.1|3769776_3770622_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
AUQ13802.1|3770745_3771021_+	antitoxin	NA	NA	NA	NA	NA
AUQ13803.1|3771017_3771275_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
AUQ13804.1|3771316_3772507_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
AUQ13805.1|3772623_3772992_+	hypothetical protein	NA	NA	NA	NA	NA
AUQ13806.1|3772988_3773540_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
AUQ13807.1|3773546_3774128_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
AUQ13808.1|3774108_3774477_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
AUQ13809.1|3774454_3774847_-	dynein regulation protein LC7	NA	NA	NA	NA	NA
AUQ13810.1|3774843_3777474_-	two-component system sensor histidine kinase EnvZ	NA	NA	NA	NA	NA
AUQ13811.1|3777709_3778174_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
AUQ13812.1|3778540_3780316_+	PE family protein	NA	NA	NA	NA	NA
AUQ13813.1|3780316_3780961_-	oxidoreductase	NA	NA	NA	NA	NA
AUQ13814.1|3780959_3781394_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
AUQ13815.1|3781482_3784722_-	DNA polymerase III subunit alpha	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
AUQ13816.1|3784913_3786254_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
AUQ13817.1|3786295_3787471_+	trehalose-phosphatase	NA	NA	NA	NA	NA
AUQ13818.1|3787707_3788349_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AUQ13819.1|3788349_3788598_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AUQ13820.1|3788602_3790030_+	amidase	NA	NA	NA	NA	NA
AUQ14745.1|3790137_3790791_+	haloacid dehalogenase	NA	NA	NA	NA	NA
AUQ13821.1|3790829_3792335_-	type B diterpene cyclase	NA	NA	NA	NA	NA
AUQ13822.1|3792339_3793230_-	diterpene synthase	NA	NA	NA	NA	NA
AUQ13823.1|3793238_3794849_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
AUQ13824.1|3794793_3795039_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
AUQ13825.1|3795081_3796343_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
