The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025757	Citrobacter freundii complex sp. CFNIH2 chromosome, complete genome	5277996	538242	546665	5277996	tRNA	Enterobacteria_phage(66.67%)	9	NA	NA
AUO63723.1|538242_539190_+	ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.0	9.0e-09
AUO63724.1|539173_539905_+	osmoprotectant uptake system permease	NA	NA	NA	NA	NA
AUO63725.1|539885_539993_-	hypothetical protein	NA	NA	NA	NA	NA
AUO63726.1|540052_540784_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	92.5	5.2e-105
AUO63727.1|541005_542694_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.4	6.9e-278
AUO63728.1|542686_543406_+	two-component system response regulator YehT	NA	NA	NA	NA	NA
AUO63729.1|543452_543923_+	hypothetical protein	NA	Q9EYF4	Enterobacteria_phage	76.1	7.0e-63
AUO63730.1|543969_544428_-	hypothetical protein	NA	Q9EYF5	Enterobacteria_phage	66.7	1.1e-49
AUO63731.1|544631_546665_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.4	5.2e-54
>prophage 2
CP025757	Citrobacter freundii complex sp. CFNIH2 chromosome, complete genome	5277996	648751	694884	5277996	head,tail,integrase,transposase,terminase,portal,lysis,capsid,plate	Escherichia_phage(20.0%)	62	644647:644661	664374:664388
644647:644661	attL	GTCGCGCTGGTGGCC	NA	NA	NA	NA
AUO63811.1|648751_649933_+|integrase	integrase	integrase	A0A0M4QX09	Salmonella_phage	89.1	6.2e-209
AUO63812.1|649913_650105_-	AlpA family transcriptional regulator	NA	A0A0M4RTZ2	Salmonella_phage	78.7	2.3e-20
AUO63813.1|650903_651116_-	hypothetical protein	NA	A0A286S2B6	Klebsiella_phage	55.7	7.6e-17
AUO63814.1|651216_651441_-	hypothetical protein	NA	A0A1B5FPG2	Escherichia_phage	67.1	3.3e-18
AUO63815.1|651437_652004_-	hypothetical protein	NA	A0A088C4R7	Shewanella_sp._phage	37.5	9.7e-27
AUO63816.1|652000_652831_-	DNA-binding protein	NA	A0A2L1IV39	Escherichia_phage	49.7	8.7e-32
AUO63817.1|652842_653421_-	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	60.0	1.7e-63
AUO63818.1|653417_653834_-	hypothetical protein	NA	A0A286S1S2	Klebsiella_phage	69.6	4.3e-48
AUO63819.1|654020_654215_-	hypothetical protein	NA	A0A286SGR4	Klebsiella_phage	75.0	1.2e-21
AUO63820.1|654272_654629_-	hypothetical protein	NA	A0A1B5FPB3	Escherichia_phage	49.6	7.7e-22
AUO63821.1|655080_655506_-	hypothetical protein	NA	A0A1B5FPB2	Escherichia_phage	51.7	1.7e-07
AUO63822.1|655502_655706_-	hypothetical protein	NA	NA	NA	NA	NA
AUO63823.1|656096_656804_-	hypothetical protein	NA	Q76H56	Enterobacteria_phage	74.0	5.5e-96
AUO63824.1|656919_657138_+	hypothetical protein	NA	NA	NA	NA	NA
AUO63825.1|657139_657886_+	hypothetical protein	NA	NA	NA	NA	NA
AUO63826.1|657997_659194_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AUO63827.1|659646_660543_+	hypothetical protein	NA	Q8W644	Enterobacteria_phage	49.2	3.9e-46
AUO63828.1|660542_661421_+	DNA-binding protein	NA	C5IHL2	Burkholderia_virus	48.1	2.7e-60
AUO63829.1|661435_662317_+	AAA family ATPase	NA	Q8W641	Enterobacteria_phage	65.3	7.9e-84
AUO63830.1|662316_663696_+	helicase	NA	Q8W640	Enterobacteria_phage	69.1	6.9e-175
AUO63831.1|663682_664048_+	hypothetical protein	NA	G8C7V6	Escherichia_phage	60.5	6.7e-37
AUO63832.1|664047_664863_+	antitermination protein	NA	A0A1B5FPA5	Escherichia_phage	76.4	4.6e-110
664374:664388	attR	GGCCACCAGCGCGAC	NA	NA	NA	NA
AUO63833.1|665156_665522_-	hypothetical protein	NA	NA	NA	NA	NA
AUO63834.1|666182_666398_+	hypothetical protein	NA	NA	NA	NA	NA
AUO63835.1|666557_666830_+	hypothetical protein	NA	A0A2H4FNF0	Salmonella_phage	95.6	2.2e-40
AUO63836.1|666829_667318_+	lysozyme	NA	A0A2H4FND7	Salmonella_phage	84.6	8.9e-77
AUO63837.1|667314_667782_+|lysis	lysis protein	lysis	A0A1V0E5Q6	Salmonella_phage	77.4	6.1e-59
AUO63838.1|667827_668883_+	hypothetical protein	NA	S4TR98	Salmonella_phage	49.6	1.7e-85
AUO63839.1|668962_669220_+	hypothetical protein	NA	G8C7W3	Escherichia_phage	68.1	5.4e-25
AUO63840.1|669291_669471_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
AUO63841.1|669450_669714_-	hypothetical protein	NA	NA	NA	NA	NA
AUO63842.1|669850_670492_+	hypothetical protein	NA	A0A1W6JTE1	Pseudomonas_phage	32.7	4.1e-05
AUO63843.1|670526_671030_-	hypothetical protein	NA	NA	NA	NA	NA
AUO63844.1|671321_671882_+	hypothetical protein	NA	NA	NA	NA	NA
AUO63845.1|671823_673950_+|terminase	terminase	terminase	A0A2K9V3X4	Faecalibacterium_phage	34.9	1.7e-95
AUO63846.1|673959_674211_+|head,tail	phage head-tail adapter protein	head,tail	NA	NA	NA	NA
AUO67868.1|674267_675860_+|portal	phage portal protein	portal	A0A291AUL8	Sinorhizobium_phage	35.8	3.3e-88
AUO63847.1|675856_676720_+	serine peptidase	NA	K4I1N3	Providencia_phage	39.0	9.3e-53
AUO63848.1|676721_677261_+	hypothetical protein	NA	NA	NA	NA	NA
AUO63849.1|677260_677665_+|head	head decoration protein	head	NA	NA	NA	NA
AUO63850.1|677763_678813_+|capsid	capsid protein	capsid	V5Q8G6	Xylella_phage	33.7	4.7e-51
AUO63851.1|678784_679195_+	hypothetical protein	NA	NA	NA	NA	NA
AUO63852.1|679199_679559_+	hypothetical protein	NA	NA	NA	NA	NA
AUO63853.1|679555_680101_+	ATP-binding protein	NA	NA	NA	NA	NA
AUO63854.1|680104_680302_+	hypothetical protein	NA	NA	NA	NA	NA
AUO63855.1|680298_681801_+|tail	phage tail protein	tail	B5TK67	Pseudomonas_phage	42.5	3.2e-101
AUO63856.1|681804_682176_+|tail	phage tail protein	tail	NA	NA	NA	NA
AUO63857.1|682177_682456_+	hypothetical protein	NA	NA	NA	NA	NA
AUO63858.1|682597_684457_+	hypothetical protein	NA	A0A0F6R8M6	Escherichia_coli_O157_typing_phage	37.6	1.2e-20
AUO63859.1|684498_684738_+	hypothetical protein	NA	NA	NA	NA	NA
AUO63860.1|684803_686204_+	hypothetical protein	NA	NA	NA	NA	NA
AUO63861.1|686200_687286_+|tail	phage tail protein	tail	M1PVV2	Vibrio_phage	33.2	1.1e-45
AUO63862.1|687282_687867_+|plate	baseplate assembly protein	plate	A0A077KAY0	Edwardsiella_phage	41.7	3.4e-06
AUO63863.1|687863_688313_+	hypothetical protein	NA	A0A0C4UR04	Shigella_phage	48.6	3.8e-18
AUO63864.1|688302_689445_+|plate	phage baseplate protein	plate	B5TK75	Pseudomonas_phage	29.2	2.1e-28
AUO63865.1|689441_690035_+|tail	phage tail protein	tail	NA	NA	NA	NA
AUO63866.1|690793_691219_+|tail	tail assembly chaperone	tail	U5P083	Shigella_phage	39.9	2.1e-18
AUO63867.1|691190_691784_-|tail	phage tail protein	tail	K7PMC4	Enterobacterial_phage	56.1	4.0e-55
AUO63868.1|691783_692224_-	hypothetical protein	NA	K7P7Q7	Enterobacteria_phage	62.4	3.3e-38
AUO63869.1|692360_692915_+	DNA-invertase	NA	A0A1B0VBM1	Salmonella_phage	83.4	9.7e-80
AUO63870.1|693020_693269_-	damage-inducible protein DinI	NA	S5MQI1	Escherichia_phage	74.1	1.9e-27
AUO63871.1|693711_694884_+	serine-type D-Ala-D-Ala carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	87.7	1.9e-197
>prophage 3
CP025757	Citrobacter freundii complex sp. CFNIH2 chromosome, complete genome	5277996	883899	935793	5277996	holin,tail,terminase	Escherichia_phage(23.73%)	76	NA	NA
AUO64053.1|883899_884172_-	excisionase	NA	A0A2H4J5E1	uncultured_Caudovirales_phage	62.2	1.5e-28
AUO64054.1|884331_884634_-	hypothetical protein	NA	NA	NA	NA	NA
AUO64055.1|884674_885016_-	hypothetical protein	NA	I3PV00	Vibrio_phage	53.8	3.3e-22
AUO67876.1|885225_885564_-	hypothetical protein	NA	R9VYJ6	Serratia_phage	39.6	4.3e-14
AUO64056.1|885862_886054_-	hypothetical protein	NA	A0A0P0ZC60	Stx2-converting_phage	61.0	1.3e-12
AUO64057.1|886050_886347_-	nucleoside 2-deoxyribosyltransferase	NA	A0A0U2SAZ1	Escherichia_phage	63.4	7.1e-29
AUO64058.1|886343_886562_-	hypothetical protein	NA	NA	NA	NA	NA
AUO64059.1|886558_887053_-	hypothetical protein	NA	A0A291AXJ6	Shigella_phage	48.4	3.1e-29
AUO64060.1|887049_888960_-	phage N-6-adenine-methyltransferase	NA	A0A1B0V7P0	Salmonella_phage	51.0	5.1e-128
AUO64061.1|888956_889418_-	hypothetical protein	NA	A0A0M4R304	Salmonella_phage	50.0	6.1e-19
AUO64062.1|889432_889915_-	hypothetical protein	NA	G8C7S9	Escherichia_phage	96.2	8.7e-77
AUO64063.1|889911_890826_-	DNA recombinase	NA	G8C7T0	Escherichia_phage	98.7	1.3e-169
AUO64064.1|890835_891117_-	hypothetical protein	NA	M9NZI3	Enterobacteria_phage	80.6	7.2e-39
AUO64065.1|891189_891399_-	cell division protein FtsZ	NA	M9NZE2	Enterobacteria_phage	94.2	9.7e-33
AUO64066.1|891550_891820_-	hypothetical protein	NA	NA	NA	NA	NA
AUO64067.1|891951_892470_-	hypothetical protein	NA	A0A2I6PGU1	Salmonella_phage	40.7	1.4e-24
AUO64068.1|892506_892752_-	hypothetical protein	NA	NA	NA	NA	NA
AUO64069.1|892837_893329_-	hypothetical protein	NA	A0A2H4J4Q4	uncultured_Caudovirales_phage	49.4	1.2e-36
AUO64070.1|893767_893971_+	hypothetical protein	NA	A0A2H5BFH9	Salmonella_phage	86.4	2.1e-24
AUO64071.1|894014_894395_-	hypothetical protein	NA	NA	NA	NA	NA
AUO64072.1|894480_894765_-	hypothetical protein	NA	NA	NA	NA	NA
AUO64073.1|894776_895073_-	DUF1902 domain-containing protein	NA	NA	NA	NA	NA
AUO64074.1|895271_896048_-	phage repressor protein C	NA	A0A088CBP2	Shigella_phage	77.9	1.8e-116
AUO64075.1|896132_896378_+	hypothetical protein	NA	A0A088CE43	Shigella_phage	80.8	2.9e-28
AUO64076.1|896408_896954_+	hypothetical protein	NA	K7P7P2	Enterobacteria_phage	80.1	3.4e-77
AUO64077.1|897047_897743_+	phage regulatory protein/antirepressor Ant	NA	A0A1P8DTE1	Proteus_phage	57.3	5.1e-62
AUO67877.1|897796_898744_+	replication protein	NA	A5VW95	Enterobacteria_phage	81.1	4.9e-55
AUO64078.1|898740_899427_+	phage replication protein	NA	G8C7U6	Escherichia_phage	64.2	4.9e-81
AUO64079.1|899428_899839_+	hypothetical protein	NA	NA	NA	NA	NA
AUO64080.1|900395_900653_+	DUF4752 domain-containing protein	NA	T1S9K2	Salmonella_phage	71.8	4.0e-28
AUO64081.1|900649_900847_+	hypothetical protein	NA	NA	NA	NA	NA
AUO64082.1|900843_901563_+	hypothetical protein	NA	NA	NA	NA	NA
AUO64083.1|901565_901865_+	hypothetical protein	NA	NA	NA	NA	NA
AUO67878.1|902461_902971_+	hypothetical protein	NA	K7PGV7	Enterobacterial_phage	65.5	1.7e-54
AUO64084.1|903362_903812_+	protein ninB	NA	Q8VNP6	Enterobacteria_phage	50.0	3.7e-37
AUO64085.1|903804_903975_+	hypothetical protein	NA	G8C7V4	Escherichia_phage	63.6	9.1e-13
AUO64086.1|903967_904258_+	hypothetical protein	NA	K7PGZ6	Enterobacteria_phage	90.6	1.8e-45
AUO64087.1|904254_904611_+	hypothetical protein	NA	K7P6W0	Enterobacteria_phage	86.4	3.0e-58
AUO64088.1|904743_905541_+	antitermination protein	NA	H6WRZ1	Salmonella_phage	91.3	9.8e-142
AUO64089.1|905797_906133_+|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	94.6	8.5e-55
AUO64090.1|906119_906569_+	muraminidase	NA	A0A0M4R365	Salmonella_phage	81.9	5.8e-67
AUO64091.1|906565_907096_+	hypothetical protein	NA	A0A291LBG9	Klebsiella_phage	49.4	7.0e-11
AUO64092.1|907153_907525_+	hypothetical protein	NA	C6ZR72	Salmonella_phage	68.9	4.4e-44
AUO64093.1|907528_908167_+	hypothetical protein	NA	I6S676	Salmonella_phage	82.5	6.5e-104
AUO64094.1|908198_908687_+	hypothetical protein	NA	H9C190	Pectobacterium_phage	78.7	1.9e-50
AUO64095.1|908683_910258_+|terminase	terminase	terminase	G8C7P3	Escherichia_phage	91.4	3.6e-297
AUO64096.1|910257_911661_+	hypothetical protein	NA	A0A1B0VMH0	Pseudomonas_phage	53.7	1.8e-130
AUO64097.1|911647_912760_+	hypothetical protein	NA	I6PD76	Cronobacter_phage	57.4	5.6e-119
AUO64098.1|913016_913802_+	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	60.3	1.3e-66
AUO64099.1|913811_914759_+	hypothetical protein	NA	A0A1B0VMF8	Pseudomonas_phage	74.4	8.4e-132
AUO64100.1|914912_915524_+	hypothetical protein	NA	M9NZE9	Enterobacteria_phage	59.9	2.0e-49
AUO64101.1|915539_915767_+	hypothetical protein	NA	NA	NA	NA	NA
AUO64102.1|915786_917244_+	glycosyltransferase	NA	K7PKP3	Enterobacterial_phage	83.5	4.6e-246
AUO64103.1|917225_917840_+	hypothetical protein	NA	S4TR53	Salmonella_phage	71.6	6.1e-83
AUO64104.1|917836_918319_+	hypothetical protein	NA	G8C7P9	Escherichia_phage	41.4	8.0e-22
AUO64105.1|918318_918669_+	hypothetical protein	NA	I6PD77	Cronobacter_phage	57.8	8.7e-34
AUO64106.1|918670_919255_+	hypothetical protein	NA	G8C7Q1	Escherichia_phage	44.4	1.9e-33
AUO64107.1|919251_919662_+	hypothetical protein	NA	I6PDJ8	Cronobacter_phage	55.1	2.4e-35
AUO64108.1|919726_920407_+|tail	phage tail protein	tail	I6PBN6	Cronobacter_phage	51.8	9.2e-56
AUO64109.1|920451_920802_+	hypothetical protein	NA	G8C7Q5	Escherichia_phage	49.1	7.4e-25
AUO64110.1|920864_921110_+	hypothetical protein	NA	I6PD79	Cronobacter_phage	66.7	1.8e-22
AUO64111.1|921272_921800_+	hypothetical protein	NA	A0A1V0E5P7	Salmonella_phage	95.4	6.4e-89
AUO64112.1|921852_924783_+|tail	phage tail tape measure protein	tail	I6PCW3	Cronobacter_phage	36.0	2.9e-138
AUO64113.1|924842_925073_+	hypothetical protein	NA	NA	NA	NA	NA
AUO64114.1|925059_925287_-	hypothetical protein	NA	NA	NA	NA	NA
AUO64115.1|925451_925802_+	hypothetical protein	NA	G8C7R0	Escherichia_phage	86.2	6.6e-50
AUO64116.1|925801_926572_+|tail	phage minor tail protein L	tail	G8C7R1	Escherichia_phage	89.8	4.9e-138
AUO64117.1|926584_927316_+	peptidase P60	NA	G8C7R2	Escherichia_phage	91.4	5.7e-144
AUO64118.1|927303_927903_+|tail	phage tail protein	tail	G8C7R3	Escherichia_phage	80.4	4.4e-86
AUO64119.1|927973_928885_+	hypothetical protein	NA	H2BD47	Pseudomonas_phage	51.6	5.6e-08
AUO64120.1|928892_929288_+	hypothetical protein	NA	NA	NA	NA	NA
AUO64121.1|929447_929585_+	hypothetical protein	NA	A0A0M4S639	Salmonella_phage	91.1	6.4e-17
AUO64122.1|929655_932856_+	host specificity protein	NA	G8C7R4	Escherichia_phage	84.2	0.0e+00
AUO64123.1|932855_933815_+	hypothetical protein	NA	NA	NA	NA	NA
AUO64124.1|933818_934073_-	hypothetical protein	NA	NA	NA	NA	NA
AUO64125.1|935553_935793_-	DinI family protein	NA	K7P6H1	Enterobacteria_phage	89.9	2.2e-33
>prophage 4
CP025757	Citrobacter freundii complex sp. CFNIH2 chromosome, complete genome	5277996	1219289	1228022	5277996	tRNA,integrase	Escherichia_phage(33.33%)	9	1212684:1212698	1224825:1224839
1212684:1212698	attL	TGCCGCGCAGGCGCT	NA	NA	NA	NA
AUO64378.1|1219289_1220423_+	chemoreceptor protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	39.4	2.2e-09
AUO67897.1|1220512_1221496_+	zinc transporter ZntB	NA	NA	NA	NA	NA
AUO64379.1|1221981_1223355_+	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	31.2	2.4e-50
AUO64380.1|1223398_1224334_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	94.1	1.4e-139
AUO67898.1|1224345_1224564_-|integrase	integrase	integrase	A0A0U2JGI6	Escherichia_phage	77.6	1.9e-15
AUO67899.1|1224765_1225962_+	MFS transporter	NA	NA	NA	NA	NA
1224825:1224839	attR	TGCCGCGCAGGCGCT	NA	NA	NA	NA
AUO64381.1|1226013_1226448_-	universal stress protein F	NA	A0A1W6JNV4	Morganella_phage	53.1	3.2e-30
AUO64382.1|1226529_1226742_-	KTSC domain-containing protein	NA	NA	NA	NA	NA
AUO64383.1|1226897_1228022_-	porin	NA	Q1MVN1	Enterobacteria_phage	57.7	5.0e-115
>prophage 5
CP025757	Citrobacter freundii complex sp. CFNIH2 chromosome, complete genome	5277996	2445186	2466546	5277996	transposase,terminase,integrase	Enterobacteria_phage(20.0%)	27	2446520:2446533	2470100:2470113
AUO65408.1|2445186_2445486_+|transposase	transposase	transposase	NA	NA	NA	NA
AUO65409.1|2445482_2446349_+|transposase	transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.2	4.3e-50
AUO65410.1|2446360_2446978_+	cyclic nucleotide-binding protein	NA	NA	NA	NA	NA
2446520:2446533	attL	CATCGCCGCGGCGA	NA	NA	NA	NA
AUO65411.1|2447044_2447674_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
AUO65412.1|2447829_2448108_+|transposase	transposase	transposase	U5P4I9	Shigella_phage	93.8	9.0e-34
AUO67958.1|2448005_2448215_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65413.1|2448164_2448977_+|transposase	transposase	transposase	U5P429	Shigella_phage	93.7	2.5e-148
AUO65414.1|2449622_2450579_-	hypothetical protein	NA	I6S634	Salmonella_phage	62.2	8.0e-106
AUO65415.1|2454027_2454525_-|terminase	terminase	terminase	K7PHI2	Enterobacteria_phage	83.0	1.0e-72
AUO65416.1|2454721_2455072_-	HNH endonuclease	NA	K7PHK9	Enterobacteria_phage	81.9	1.2e-51
AUO67959.1|2455071_2455683_-	hypothetical protein	NA	S4TR53	Salmonella_phage	74.6	1.1e-84
AUO65417.1|2455846_2456080_+	hypothetical protein	NA	NA	NA	NA	NA
AUO65418.1|2456217_2457675_-	glycosyltransferase	NA	K7PKP3	Enterobacterial_phage	82.1	1.1e-242
AUO65419.1|2457694_2457922_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65420.1|2457929_2458109_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65421.1|2458339_2458537_-	hypothetical protein	NA	K7PHC3	Enterobacterial_phage	95.4	4.4e-27
AUO67960.1|2458967_2459465_-	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	40.7	3.4e-31
AUO65422.1|2459607_2459991_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65423.1|2461122_2461404_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65424.1|2461728_2462133_-	DNA primase	NA	A0A286SGR4	Klebsiella_phage	47.9	1.4e-11
AUO65425.1|2462279_2462567_-	hypothetical protein	NA	A0A2H4JGW3	uncultured_Caudovirales_phage	48.9	2.1e-17
AUO65426.1|2462766_2462970_+	hypothetical protein	NA	NA	NA	NA	NA
AUO67961.1|2463049_2463592_-	hypothetical protein	NA	Q3LZN7	Bacteriophage	52.2	1.5e-21
AUO65427.1|2463772_2463970_-	dipicolinate synthase	NA	A0A1V0E8E5	Vibrio_phage	48.1	1.3e-07
AUO65428.1|2464187_2464646_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65429.1|2464664_2465018_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65430.1|2465358_2466546_-|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	52.8	1.4e-120
2470100:2470113	attR	CATCGCCGCGGCGA	NA	NA	NA	NA
>prophage 6
CP025757	Citrobacter freundii complex sp. CFNIH2 chromosome, complete genome	5277996	2740600	2784796	5277996	holin,tail,integrase	uncultured_Caudovirales_phage(21.21%)	41	2743324:2743342	2780897:2780915
AUO65660.1|2740600_2741368_+	ferric citrate ABC transporter ATP-binding protein FecE	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.1	6.4e-13
AUO65661.1|2741963_2743160_-|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	55.4	1.9e-128
2743324:2743342	attL	TGGTGCCGATAATAGGAGT	NA	NA	NA	NA
AUO65662.1|2743556_2743931_-	hypothetical protein	NA	R9TPM9	Aeromonas_phage	46.2	5.1e-16
AUO65663.1|2743927_2744458_-	lysozyme	NA	K7PLY1	Enterobacteria_phage	85.2	1.7e-81
AUO65664.1|2744438_2744669_-|holin	holin	holin	A5LH82	Enterobacteria_phage	68.1	1.0e-19
AUO65665.1|2744762_2746796_-	hypothetical protein	NA	C6ZR20	Salmonella_phage	30.4	5.7e-69
AUO65666.1|2746829_2749073_-	hypothetical protein	NA	T1S9Y2	Salmonella_phage	45.5	2.9e-45
AUO65667.1|2749093_2750704_-	transcriptional regulator	NA	A0A2H4JCA3	uncultured_Caudovirales_phage	70.7	6.5e-225
AUO65668.1|2750700_2751042_-	hypothetical protein	NA	A0A2H4J7H0	uncultured_Caudovirales_phage	50.9	1.4e-20
AUO65669.1|2751106_2753998_-	hypothetical protein	NA	G9L6D4	Escherichia_phage	76.6	0.0e+00
AUO65670.1|2753997_2756706_-	lytic transglycosylase	NA	G9L6D3	Escherichia_phage	66.6	0.0e+00
AUO65671.1|2756705_2757149_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65672.1|2757148_2757595_-	hypothetical protein	NA	A0A2K9VAY9	Citrobacter_phage	37.5	3.0e-15
AUO65673.1|2757597_2759586_-	hypothetical protein	NA	A0A2H4J6H2	uncultured_Caudovirales_phage	47.2	2.2e-174
AUO65674.1|2759587_2760151_-	hypothetical protein	NA	A0A2H4JID6	uncultured_Caudovirales_phage	50.3	1.2e-48
AUO65675.1|2760208_2761120_-	hypothetical protein	NA	A0A2H4JC66	uncultured_Caudovirales_phage	37.9	2.7e-42
AUO65676.1|2761333_2761693_-	hypothetical protein	NA	A0AR14	Salmonella_phage	65.0	7.3e-36
AUO65677.1|2761726_2762557_-	hypothetical protein	NA	A0A2H4JEQ5	uncultured_Caudovirales_phage	40.7	2.1e-41
AUO65678.1|2762543_2762774_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65679.1|2762773_2764396_-|tail	phage tail protein	tail	A0A2H4J3N6	uncultured_Caudovirales_phage	57.7	1.4e-171
AUO67973.1|2764399_2764648_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65680.1|2764689_2765070_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65681.1|2765348_2765624_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65682.1|2765909_2768102_-	replication protein	NA	B6SCY1	Bacteriophage	70.3	1.5e-171
AUO65683.1|2768105_2768318_-	transcriptional regulator	NA	A0A0R6PHL1	Moraxella_phage	44.4	1.2e-06
AUO65684.1|2768438_2769062_+	DNA-binding protein	NA	A0A1I9KG86	Aeromonas_phage	44.8	3.9e-37
AUO65685.1|2769609_2770536_+	hypothetical protein	NA	NA	NA	NA	NA
AUO65686.1|2770538_2771840_+	hypothetical protein	NA	B6SCX9	Bacteriophage	56.1	1.2e-133
AUO65687.1|2771854_2772403_+	hypothetical protein	NA	Q775A5	Bordetella_phage	66.5	4.2e-67
AUO65688.1|2772450_2773089_+	hypothetical protein	NA	H6WRY3	Salmonella_phage	71.5	4.9e-75
AUO65689.1|2773162_2775229_+	DNA polymerase	NA	Q775A3	Bordetella_phage	68.7	1.9e-277
AUO65690.1|2775233_2775449_+	hypothetical protein	NA	NA	NA	NA	NA
AUO65691.1|2775537_2775831_+	nuclease	NA	B6SD64	Bacteriophage	67.1	1.5e-26
AUO65692.1|2775803_2776952_+	DNA cytosine methyltransferase	NA	Q858D4	Salmonella_phage	48.5	9.3e-101
AUO65693.1|2776954_2777884_-	hypothetical protein	NA	A0A1R3Y6Z6	Salmonella_virus	38.0	9.7e-48
AUO65694.1|2777994_2779389_+	hypothetical protein	NA	Q3LZN8	Bacteriophage	73.4	4.2e-212
AUO65695.1|2779385_2779574_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
AUO65696.1|2779570_2780743_-|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	49.7	5.4e-112
AUO65697.1|2781086_2782340_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.8	2.1e-98
2780897:2780915	attR	TGGTGCCGATAATAGGAGT	NA	NA	NA	NA
AUO65698.1|2782351_2783455_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	39.8	2.6e-60
AUO65699.1|2783743_2784796_+	phosphoporin PhoE	NA	Q1MVN1	Enterobacteria_phage	60.3	7.7e-118
>prophage 7
CP025757	Citrobacter freundii complex sp. CFNIH2 chromosome, complete genome	5277996	3101337	3252455	5277996	tRNA,transposase,integrase	Escherichia_phage(18.18%)	114	3123596:3123610	3251026:3252488
AUO65966.1|3101337_3102057_-|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
AUO65967.1|3102119_3102266_+	adenine glycosylase	NA	NA	NA	NA	NA
AUO65968.1|3102219_3103272_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AUO65969.1|3103299_3103575_+	Fe(2+)-trafficking protein	NA	NA	NA	NA	NA
AUO65970.1|3103645_3104731_+	murein transglycosylase C	NA	NA	NA	NA	NA
AUO65971.1|3104944_3106201_+	nucleoside permease	NA	NA	NA	NA	NA
AUO65972.1|3106294_3108430_-	ornithine decarboxylase	NA	NA	NA	NA	NA
AUO65973.1|3108857_3109565_+	hypothetical protein	NA	NA	NA	NA	NA
AUO65974.1|3109928_3110930_-	recombinase XerD	NA	NA	NA	NA	NA
AUO65975.1|3110985_3112611_-	relaxase	NA	NA	NA	NA	NA
AUO65976.1|3112728_3114177_-	DNA helicase	NA	A0A075DXT4	Acinetobacter_phage	31.1	9.8e-47
AUO65977.1|3114654_3115815_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.4	4.6e-39
AUO65978.1|3116396_3116954_+	NAD(P)H dehydrogenase	NA	NA	NA	NA	NA
AUO65979.1|3117096_3118014_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AUO65980.1|3118041_3118398_-	transcriptional regulator	NA	NA	NA	NA	NA
AUO65981.1|3118551_3119535_+	alcohol dehydrogenase	NA	NA	NA	NA	NA
AUO65982.1|3119940_3120696_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AUO65983.1|3120944_3121805_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AUO65984.1|3121924_3123466_-	MFS transporter	NA	NA	NA	NA	NA
AUO65985.1|3123462_3124605_-	secretion protein HlyD	NA	NA	NA	NA	NA
3123596:3123610	attL	TCATTCTGGCCCGGC	NA	NA	NA	NA
AUO65986.1|3126131_3126785_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
3123596:3123610	attL	TCATTCTGGCCCGGC	NA	NA	NA	NA
AUO65987.1|3126804_3127170_+	hypothetical protein	NA	NA	NA	NA	NA
AUO65988.1|3128798_3129587_+	hypothetical protein	NA	NA	NA	NA	NA
AUO65989.1|3129800_3130211_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
AUO65990.1|3130602_3131277_-|integrase	integrase	integrase	A0A2K9V411	Faecalibacterium_phage	40.1	4.6e-31
AUO65991.1|3131382_3132315_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65992.1|3132420_3133407_-	DNA primase	NA	A0A1V0EEV1	Caulobacter_phage	39.3	4.9e-50
AUO65993.1|3133506_3134154_-	hypothetical protein	NA	NA	NA	NA	NA
AUO65994.1|3135242_3135431_+	hypothetical protein	NA	NA	NA	NA	NA
AUO67986.1|3136168_3137068_-	DNA-binding protein	NA	NA	NA	NA	NA
AUO65995.1|3139788_3141183_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
3139038:3139052	attR	GCCGGGCCAGAATGA	NA	NA	NA	NA
AUO65996.1|3141201_3143079_-	PTS beta-glucoside transporter subunit IIABC	NA	NA	NA	NA	NA
3139038:3139052	attR	GCCGGGCCAGAATGA	NA	NA	NA	NA
AUO65997.1|3143256_3144096_-	transcription antiterminator LicT	NA	NA	NA	NA	NA
AUO65998.1|3144469_3145048_+	hypothetical protein	NA	Q1MVF0	Enterobacteria_phage	67.9	3.4e-27
AUO65999.1|3146624_3147833_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66000.1|3147915_3148695_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66001.1|3150036_3150648_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
AUO67987.1|3150744_3151119_+	transcriptional regulator	NA	NA	NA	NA	NA
AUO66002.1|3151174_3152041_-|transposase	transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.2	4.3e-50
AUO66003.1|3152037_3152337_-|transposase	transposase	transposase	NA	NA	NA	NA
AUO66004.1|3152504_3153938_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
AUO66005.1|3154190_3155216_-	transcriptional regulator	NA	NA	NA	NA	NA
AUO66006.1|3155358_3157215_-	PTS beta-glucoside transporter subunit EIIBCA	NA	NA	NA	NA	NA
AUO66007.1|3157905_3158829_+|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	83.4	1.3e-150
AUO66008.1|3159101_3159626_+	RNA polymerase subunit sigma-70	NA	NA	NA	NA	NA
AUO66009.1|3159668_3160667_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66010.1|3160833_3162612_+	hypothetical protein	NA	NA	NA	NA	NA
AUO67988.1|3162956_3163655_+	tonB-system energizer ExbB	NA	NA	NA	NA	NA
AUO66011.1|3163657_3164101_+	TonB system transport protein ExbD	NA	NA	NA	NA	NA
AUO66012.1|3164097_3164916_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66013.1|3165050_3167552_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66014.1|3167568_3170304_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66015.1|3170300_3170630_+	hypothetical protein	NA	A0A0A7CHH9	Dinoroseobacter_phage	37.3	5.1e-12
AUO66016.1|3170626_3171508_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66017.1|3171556_3172666_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66018.1|3174703_3175627_-|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	83.4	4.6e-151
AUO66019.1|3176449_3177232_+|transposase	transposase	transposase	A0A2L1IVB6	Escherichia_phage	96.1	3.3e-134
AUO66020.1|3177353_3177686_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66021.1|3177940_3178303_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66022.1|3178811_3179363_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66023.1|3179467_3180637_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66024.1|3180687_3181506_+	sugar-phosphatase	NA	NA	NA	NA	NA
AUO66025.1|3182301_3183822_-	conjugal transfer protein TraG	NA	NA	NA	NA	NA
AUO66026.1|3183824_3184163_-	hypothetical protein	NA	NA	NA	NA	NA
AUO67989.1|3185109_3185442_-	integrating conjugative element membrane protein	NA	NA	NA	NA	NA
AUO66027.1|3185531_3185774_-	integrating conjugative element protein	NA	NA	NA	NA	NA
AUO66028.1|3185773_3186121_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66029.1|3186361_3186574_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66030.1|3186754_3187540_-	NADH-ubiquinone oxidoreductase	NA	NA	NA	NA	NA
AUO66031.1|3187623_3187995_+	transcriptional regulator, HxlR family protein	NA	NA	NA	NA	NA
AUO66032.1|3188015_3189026_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AUO66033.1|3189287_3190046_-	integrating conjugative element membrane protein	NA	NA	NA	NA	NA
AUO66034.1|3190038_3192078_-	conjugative coupling factor TraD, PFGI-1 class	NA	NA	NA	NA	NA
AUO66035.1|3192471_3192873_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66036.1|3193105_3194110_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66037.1|3194441_3195647_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66038.1|3195643_3197572_+	hypothetical protein	NA	G9BWD6	Planktothrix_phage	37.9	4.3e-34
AUO66039.1|3197572_3198937_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66040.1|3199421_3200186_-	integrating conjugative element protein	NA	NA	NA	NA	NA
AUO66041.1|3200373_3201522_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66042.1|3201798_3202098_+|transposase	transposase	transposase	NA	NA	NA	NA
AUO66043.1|3202094_3202961_+|transposase	transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.2	4.3e-50
AUO67990.1|3202890_3203772_+|transposase	IS5 family transposase	transposase	A0A1B0VFY5	Salmonella_phage	84.0	4.0e-128
AUO66044.1|3204270_3204648_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66045.1|3204679_3206188_-	conjugal transfer protein TraG	NA	NA	NA	NA	NA
AUO66046.1|3206190_3206529_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66047.1|3207538_3208735_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AUO66048.1|3209723_3209972_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66049.1|3209955_3210198_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66050.1|3210262_3210799_-	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	64.8	9.5e-56
AUO66051.1|3210859_3211330_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66052.1|3211965_3213975_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	29.2	7.2e-40
AUO66053.1|3213990_3214545_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66054.1|3215127_3215706_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66055.1|3215702_3217073_-	replicative DNA helicase	NA	O80281	Escherichia_phage	53.1	3.7e-120
AUO66056.1|3217065_3217941_-	chromosome partitioning protein ParA	NA	NA	NA	NA	NA
AUO66057.1|3218244_3219492_+|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	38.1	7.0e-78
AUO66058.1|3219710_3220772_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66059.1|3220743_3222237_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66060.1|3222812_3223112_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66061.1|3223367_3224099_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66062.1|3224098_3224320_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66063.1|3225916_3226189_-	zinc/iron-chelating domain-containing protein	NA	NA	NA	NA	NA
AUO66064.1|3226185_3227757_-	cobalamin adenosyltransferase	NA	NA	NA	NA	NA
AUO66065.1|3227803_3228901_-	chemotaxis protein	NA	NA	NA	NA	NA
AUO66066.1|3228939_3229860_-	WYL domain-containing protein	NA	A0A0R6PH67	Moraxella_phage	26.8	9.9e-29
AUO66067.1|3230355_3230658_+|transposase	transposase	transposase	Q716C1	Shigella_phage	90.0	5.3e-40
AUO66068.1|3230684_3231524_+|transposase	transposase	transposase	Q716C2	Shigella_phage	87.8	1.8e-149
AUO66069.1|3232138_3232471_-	hypothetical protein	NA	NA	NA	NA	NA
AUO66070.1|3232470_3243360_-	hypothetical protein	NA	A0A0R6PJK4	Moraxella_phage	40.3	1.9e-30
AUO66071.1|3243372_3245067_-	peptide transporter	NA	NA	NA	NA	NA
AUO66072.1|3246258_3248184_+	hypothetical protein	NA	A0A2H4J2R8	uncultured_Caudovirales_phage	38.6	5.9e-124
AUO66073.1|3248628_3249045_+	hypothetical protein	NA	NA	NA	NA	NA
AUO66074.1|3251258_3252455_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
3251026:3252488	attR	CCCGTTACTTTATTCGAACCCCTTATACTAGGGGTGTTAGCCAGCCAGACCCGGCATGATTACTGCCCCCAGTCGTCCATGATCCGGGGGGTGATGTCACCGGGTCTGGTGGGGCGCTGGTAACCGCTAATAGGGGCTAGGTCAGGCACTTTATGCCGGGACCGTCTGTAACGTGGATGCCGGTACCTGCTCCCCGAGGTTATCTGGTTAACCCGTATAAACAGGGAGACAGAATGACCGAATCCAGCGATTACGAATCAGTCCAGGTCTTTATTGGCGTTGATGTCGGTAAAGATACCCATCACGCCGTTGCCGTTAATCGTTCAGGTAAACGCCTGTTCGACAAAGCATTACCCAACGACGAAAACAAACTCAGAGCGCTGGTATCTGACCTGAAACAACATGGTCAGATACTGCTGGTTGTTGACCAGCCTGCCACCATCGGTGCGTTACCCGTCGCCGTTGCCCGTTCTGAAGGTGTCCTTGTCGGATACCTCCCCGGGCTGGCAATGCGCCGTATCGCCGACTTACATGCCGGTGAAGCCAAAACCGATGCTCGTGATGCAGCCATCATCGCCGAAGCTGCCCGTACTCTGCCTCACGCGCTACGCACTCTGAAGCTGGCTGACGAGCAAATCGCCGAGCTCTCCATGCTCTGTGGCTTCGATGATGATCTTGCTGCACAGACAACGCAGGCCAGCAACCGTATCCGCGGTCTCCTGACACAGATACATCCGGCACTGGAGCGCGTTATCGGTCCGCGACTGGATCACCCGGCAGTACTCGATCTTCTCCAGAGATATCCCTCACCCGATAAACTTGCTTCGCTGGGTGAGAAGAAACTGGCAACCCAGCTCTGCAAACTCGCGCCCCGTCTGGGAAAGCGCCTTGCTACAGATATCACCCAGGCACTAACACAGCAAACCGTCGTCGTTCCCGGCACGAATGCCGCTGTCGTCGTTCTGCCACGCCTGGCACTCCAGCTCATCACGCTGCGTAAGCAAAGAGACGAGGTGGCCCTTGAGGTGGAACAGCGGGTTCTTGCTCACCCTCTTTACCCGGTCCTGACCAGCATGCCCGGAGTCGGTGTCAGGACCGCAGCCAGACTCCTCACAGAGGTCGCCTGCCGCGCCTTCGCCTCTGCCGCACATCTCGCTGCTTATGCTGGCCTTGCGCCGGTAACCCGGCGCTCCGGTTCGTCAATACGTGGCGAACACCCATCAAGGCGAGGCAATAAAACCCTCAAACGGGCGCTGTTCCTGTCGGCCTTCGCGGCGCTAAGAGATCCGCTCTCCAGGGCTTACTACACACGCAAAATGAGGCAGGGAAAGCGACACAATCAGGCACTTATCGCCCTGGCAAGACGACGCTGTGACGTTCTGTTCGCCATGATGCGTGACGGTACTTTTTATACCCCTGCGGCATCATAAACATGCTTGACAACTTTATAGGGGCACCCCCCC	NA	NA	NA	NA
>prophage 8
CP025757	Citrobacter freundii complex sp. CFNIH2 chromosome, complete genome	5277996	3468315	3475988	5277996		Pseudoalteromonas_phage(16.67%)	10	NA	NA
AUO66270.1|3468315_3469293_+	calcium/sodium antiporter	NA	A0A2D1GNI8	Pseudoalteromonas_phage	22.3	1.3e-05
AUO66271.1|3469307_3470294_+	D-arabinose 5-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	31.8	8.7e-39
AUO66272.1|3470314_3470881_+	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	NA	A0A140XBD6	Dickeya_phage	76.5	5.0e-55
AUO66273.1|3470877_3471453_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AUO66274.1|3471421_3471970_+	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA	NA
AUO66275.1|3471976_3472702_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.4	1.4e-22
AUO66276.1|3472749_3474183_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
AUO66277.1|3474205_3474493_+	ribosomal subunit interface protein	NA	A0A0M7QCF2	Escherichia_phage	43.2	4.2e-10
AUO66278.1|3474608_3475100_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA	NA
AUO66279.1|3475133_3475988_+	RNase adaptor protein RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.4	1.4e-05
>prophage 1
CP025758	Citrobacter freundii complex sp. CFNIH2 plasmid pKPC-349c, complete sequence	62588	0	46848	62588	integrase,transposase	Escherichia_phage(27.78%)	46	23561:23620	42678:43287
AUO68088.1|2132_2702_-	hypothetical protein	NA	E5FFF9	Burkholderia_phage	43.2	5.2e-36
AUO68089.1|2956_3136_+	transcriptional regulator	NA	NA	NA	NA	NA
AUO68090.1|3094_4108_-|integrase	integron integrase	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
AUO68091.1|4254_4737_+	trimethoprim-resistant dihydrofolate reductase DfrA14	NA	G3MBI7	Bacillus_virus	28.9	6.6e-16
AUO68092.1|4957_5224_+	mobilization protein	NA	NA	NA	NA	NA
AUO68093.1|5366_6131_+|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
AUO68094.1|6397_7606_+	restriction endonuclease	NA	E5E3X4	Burkholderia_phage	42.5	1.2e-34
AUO68095.1|7639_9073_-	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	50.6	7.0e-106
AUO68096.1|9177_9444_+|transposase	transposase	transposase	U5P0U6	Shigella_phage	92.0	3.6e-40
AUO68097.1|9454_9661_-	hypothetical protein	NA	NA	NA	NA	NA
AUO68149.1|9665_10154_-	restriction endonuclease	NA	NA	NA	NA	NA
AUO68098.1|10362_10674_-	hypothetical protein	NA	NA	NA	NA	NA
AUO68099.1|10709_11024_-	IncN plasmid KikA protein	NA	NA	NA	NA	NA
AUO68100.1|11020_11365_-	hypothetical protein	NA	NA	NA	NA	NA
AUO68150.1|11380_11731_-	KorB	NA	NA	NA	NA	NA
AUO68101.1|11794_12529_+	traL protein	NA	NA	NA	NA	NA
AUO68151.1|12537_12819_+	transcriptional regulator	NA	NA	NA	NA	NA
AUO68102.1|12828_13122_+	conjugal transfer protein TraM	NA	NA	NA	NA	NA
AUO68103.1|13171_13489_+	type IV secretion system protein VirB3	NA	NA	NA	NA	NA
AUO68104.1|13488_16089_+	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA	NA
AUO68105.1|16106_16820_+	type IV secretion system protein	NA	NA	NA	NA	NA
AUO68106.1|16827_17055_+	entry exclusion protein	NA	NA	NA	NA	NA
AUO68107.1|17070_18111_+	conjugal transfer protein TraD	NA	NA	NA	NA	NA
AUO68108.1|18193_18340_+	conjugal transfer protein TraN	NA	NA	NA	NA	NA
AUO68109.1|18329_19028_+	type IV secretion system protein VirB8	NA	NA	NA	NA	NA
AUO68110.1|19038_19923_+	conjugal transfer protein TraO	NA	NA	NA	NA	NA
AUO68111.1|21123_22119_+	conjugal transfer protein TraG	NA	NA	NA	NA	NA
AUO68112.1|22118_22652_+	endonuclease	NA	A0A1B2LRT6	Wolbachia_phage	33.9	5.8e-21
AUO68113.1|22825_23131_-	hypothetical protein	NA	NA	NA	NA	NA
AUO68114.1|23379_23577_+	transcriptional regulator	NA	NA	NA	NA	NA
23561:23620	attL	GGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTTTTGCTGATGGAGCTG	NA	NA	NA	NA
AUO68115.1|23623_24280_+|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	98.9	3.7e-110
AUO68116.1|24203_26303_-|transposase	transposase	transposase	Q1MVP5	Enterobacteria_phage	100.0	0.0e+00
AUO68117.1|26669_27989_+|transposase	IS1182 family transposase ISKpn6	transposase	Q9MBP7	Staphylococcus_prophage	24.2	1.9e-12
AUO68118.1|28238_29120_-	carbapenem-hydrolyzing class A beta-lactamase KPC-3	NA	A0A1B0VBP7	Salmonella_phage	52.2	2.8e-73
AUO68119.1|29506_30286_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	61.8	2.5e-89
AUO68120.1|30282_31308_-|transposase	transposase	transposase	A0A2L1IVA1	Escherichia_phage	50.3	1.4e-87
AUO68121.1|31414_34444_-|transposase	DDE transposase	transposase	NA	NA	NA	NA
AUO68122.1|34553_36269_+|integrase	integrase	integrase	NA	NA	NA	NA
AUO68123.1|37383_37941_+|transposase	transposase	transposase	Q1MVP4	Enterobacteria_phage	98.4	2.0e-93
AUO68124.1|38123_38729_+	AacA4 family aminoglycoside N(6')-acetyltransferase	NA	NA	NA	NA	NA
AUO68125.1|38798_39587_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA	NA
AUO68126.1|39646_40471_+	oxacillin-hydrolyzing class D beta-lactamase OXA-9	NA	NA	NA	NA	NA
AUO68127.1|41170_41779_+	hypothetical protein	NA	Q38212	Enterobacteria_phage	98.5	6.4e-109
AUO68128.1|41969_42686_-|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	2.4e-139
AUO68129.1|43246_43612_-	FipA	NA	NA	NA	NA	NA
42678:43287	attR	CAGCTCCATCAGCAAAAGGGGATGATAAGTTTATCACCACCGACTATTTGCAACAGTGCCCAGTCCACGCCTCAGAACTTGTGGGCTCGCTTTTAAAAAGTTCCCGTCCGTCAGGGCTGGCGCAGGCGATTATGGAGGTGGGACGGGTCAACAAGACGCTGTACCTCCTCAACTACATTGATGATGAAGAATATCGTCGCAGGATACTGACTCAGCTTAACCGGGGAGAAGGCCGTCACGCCGTGGCAAGGGCGATCTGTTACGGCCAACGTGGTGAGATTAGAAAACGTTACCGTGAGGGGCAGGAGGATCAACTGGGTGCGCTGGGGCTTGTCACTAACGCAGTTGTATTGTGGAACACGCTTTATATGCAGGAAGCGCTATCACATTTGCGCAGCGCTGGTGAGATCCCGGAAGACGAGCATATCTCACGCCTGTCGCCACTGATGTACGGTCATATCAACATGCTGGGACATTATACGTTCACGCTGCCGGAAAATATTCTGAAGGGAGAGTTGAGGCCATTAAATTTCAATTCAAACAATGAATTATTGCCTTAACGTGGTTTTTTACACGATTGAACCTCGAACCCCTATATCGGCTAAAGCAC	NA	NA	NA	NA
AUO68130.1|43611_46848_-	conjugative relaxase	NA	U5J9B0	Bacillus_phage	27.3	2.4e-05
>prophage 2
CP025758	Citrobacter freundii complex sp. CFNIH2 plasmid pKPC-349c, complete sequence	62588	58493	60187	62588		Morganella_phage(50.0%)	2	NA	NA
AUO68146.1|58493_58934_+	peptidase	NA	A0A1W6JNS2	Morganella_phage	48.8	1.2e-27
AUO68147.1|58921_60187_+	DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	53.8	2.2e-119
