The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	1121116	1130372	5143533	tail	Enterobacteria_phage(44.44%)	9	NA	NA
AUM21347.1|1121116_1122889_-	hypothetical protein	NA	A0A1U9AJG3	Stx1_converting_phage	98.8	0.0e+00
AUM21348.1|1124179_1124779_+	Ail/Lom family protein	NA	A0A0P0ZE39	Stx2-converting_phage	96.5	3.1e-108
AUM21349.1|1124930_1126244_+|tail	phage tail protein	tail	H6WZM9	Escherichia_phage	97.7	1.4e-76
AUM21350.1|1126245_1126515_+|tail	phage tail protein	tail	B6DZB8	Enterobacteria_phage	98.9	4.9e-45
AUM21351.1|1126625_1127207_+	DUF1076 domain-containing protein	NA	H6WZN1	Escherichia_phage	55.3	2.1e-48
AUM21352.1|1127279_1127909_+	DUF1076 domain-containing protein	NA	B6DZB9	Enterobacteria_phage	92.2	2.1e-78
AUM21353.1|1127990_1128632_+	DUF1076 domain-containing protein	NA	B6DZC0	Enterobacteria_phage	98.6	4.8e-107
AUM21354.1|1128792_1129041_-	damage-inducible protein DinI	NA	A5LH55	Enterobacteria_phage	98.8	5.4e-38
AUM21355.1|1129889_1130372_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	46.8	4.0e-29
>prophage 2
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	1393868	1477430	5143533	holin,integrase,tRNA,tail,plate,transposase	Enterobacteria_phage(53.06%)	89	1391400:1391416	1418523:1418539
1391400:1391416	attL	GGTTGTCGATACCAATA	NA	NA	NA	NA
AUM21584.1|1393868_1395302_-	glycosyl hydrolase family 32	NA	F8WPR5	Bacillus_phage	25.4	9.1e-29
AUM25088.1|1397297_1397849_+	replication protein O	NA	M1FN81	Enterobacteria_phage	99.5	9.6e-104
AUM21585.1|1397845_1398547_+	Replication protein P	NA	A0A1U9AJJ8	Stx1_converting_phage	100.0	3.4e-130
AUM21586.1|1398543_1398834_+	protein ren	NA	A0A1I9LJP5	Stx_converting_phage	100.0	9.6e-47
AUM21587.1|1398904_1399183_+	hypothetical protein	NA	Q9ZWY1	Enterobacteria_phage	100.0	3.4e-49
AUM21588.1|1399314_1399530_+	hypothetical protein	NA	A0A1I9LJP7	Stx_converting_phage	100.0	1.3e-32
AUM21589.1|1399540_1399777_+	restriction alleviation protein, Lar family	NA	Q8HA09	Enterobacteria_phage	100.0	1.2e-39
AUM21590.1|1399733_1400180_+	recombination protein NinB	NA	A0A0N7C2V1	Escherichia_phage	100.0	2.4e-81
AUM21591.1|1400176_1400704_+	phage N-6-adenine-methyltransferase	NA	H6WZI7	Escherichia_phage	99.4	1.2e-100
AUM21592.1|1400700_1400841_+	NinE family protein	NA	A5VW90	Enterobacteria_phage	100.0	1.0e-14
AUM21593.1|1400876_1401572_+|transposase	IS1 family transposase	transposase	A0A0U2RK18	Escherichia_phage	97.8	3.1e-131
AUM21594.1|1401932_1402667_+	phage antirepressor Ant	NA	A0A0N7C203	Escherichia_phage	99.6	5.5e-123
AUM21595.1|1402741_1403464_+	DNA-binding protein	NA	A0A0P0ZCB2	Stx2-converting_phage	99.6	3.9e-129
AUM21596.1|1403463_1404069_+	recombination protein NinG	NA	Q8VNP2	Enterobacteria_phage	100.0	1.9e-97
AUM21597.1|1404065_1404260_+	protein ninH	NA	G9L694	Escherichia_phage	100.0	1.9e-30
AUM21598.1|1404252_1404687_+	antitermination protein	NA	Q777W5	Enterobacteria_phage	99.3	1.8e-81
AUM21599.1|1404675_1404921_-	hypothetical protein	NA	A0A0P0ZGS0	Escherichia_phage	100.0	5.0e-36
AUM21600.1|1404935_1405088_+	DNA methylase	NA	A0A2R2Z327	Escherichia_phage	100.0	4.0e-20
AUM21601.1|1405798_1407736_+	sialate O-acetylesterase	NA	A0A0P0ZBP4	Stx2-converting_phage	96.4	0.0e+00
AUM21602.1|1407872_1408052_+	DUF1378 domain-containing protein	NA	A0A2R2Z345	Escherichia_phage	96.6	1.4e-24
AUM21603.1|1408092_1408365_+	DUF826 domain-containing protein	NA	A0A0P0ZC09	Stx2-converting_phage	100.0	4.8e-24
AUM21604.1|1408441_1408657_+|holin	holin	holin	Q9ZWW2	Enterobacteria_phage	100.0	6.9e-34
AUM21605.1|1409043_1409775_+	host specificity protein J	NA	Q687E8	Enterobacteria_phage	99.6	4.2e-123
AUM21606.1|1409841_1410441_+	Ail/Lom family protein	NA	A0A0P0ZE39	Stx2-converting_phage	98.5	1.7e-109
AUM21607.1|1410505_1411819_+|tail	phage tail protein	tail	H6WZM9	Escherichia_phage	97.9	4.8e-77
AUM21608.1|1411820_1412090_+|tail	phage tail protein	tail	B6DZB8	Enterobacteria_phage	98.9	4.9e-45
AUM21609.1|1412195_1413077_+	T3SS effector protein NleH	NA	A5LH48	Enterobacteria_phage	89.4	1.1e-144
AUM21610.1|1413307_1414006_+	T3SS effector protein NleD	NA	NA	NA	NA	NA
AUM21611.1|1414102_1415269_-|integrase	integrase	integrase	Q716F9	Shigella_phage	98.7	1.6e-220
AUM21612.1|1415580_1416513_-	hypothetical protein	NA	E7DYY8	Enterobacteria_phage	99.7	2.1e-167
AUM21613.1|1416610_1416781_+	hypothetical protein	NA	NA	NA	NA	NA
AUM21614.1|1416806_1417562_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA	NA
AUM21615.1|1417743_1418802_-	hypothetical protein	NA	NA	NA	NA	NA
1418523:1418539	attR	GGTTGTCGATACCAATA	NA	NA	NA	NA
AUM21616.1|1419167_1420508_-	long-chain fatty acid transporter	NA	NA	NA	NA	NA
AUM21617.1|1420543_1420795_+	hypothetical protein	NA	NA	NA	NA	NA
AUM21618.1|1420879_1421164_+	hypothetical protein	NA	NA	NA	NA	NA
AUM21619.1|1421344_1422655_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA	NA
AUM21620.1|1422654_1424799_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA	NA
AUM21621.1|1425001_1425487_+	phosphohistidine phosphatase	NA	NA	NA	NA	NA
AUM21622.1|1426161_1426725_+	type 1 fimbrial protein	NA	NA	NA	NA	NA
AUM21623.1|1429706_1430231_+	fimbrial protein	NA	NA	NA	NA	NA
AUM21624.1|1430232_1431090_+	DUF2544 domain-containing protein	NA	NA	NA	NA	NA
AUM21625.1|1431211_1431763_-	endonuclease SmrB	NA	NA	NA	NA	NA
AUM21626.1|1431928_1432861_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AUM21627.1|1432895_1433981_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	48.4	9.1e-90
AUM21628.1|1433984_1434809_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA	NA
AUM21629.1|1434808_1435618_+	hypothetical protein	NA	NA	NA	NA	NA
AUM21630.1|1435617_1436166_+	elongation factor P hydroxylase	NA	NA	NA	NA	NA
AUM21631.1|1436199_1436478_+	hypothetical protein	NA	NA	NA	NA	NA
AUM21632.1|1436598_1438605_-|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	tRNA	NA	NA	NA	NA
AUM21633.1|1438763_1439984_+	beta-ketoacyl-[acyl-carrier-protein] synthase I	NA	NA	NA	NA	NA
AUM25089.1|1440129_1440351_-	hypothetical protein	NA	NA	NA	NA	NA
AUM21634.1|1440292_1441471_+	arabinose transporter	NA	NA	NA	NA	NA
AUM21635.1|1441467_1442463_-	flagella biosynthesis regulator Flk	NA	NA	NA	NA	NA
AUM21636.1|1442731_1443625_-	type VI secretion protein	NA	NA	NA	NA	NA
AUM21637.1|1443629_1443962_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
AUM21638.1|1444224_1444365_-	Hok/Gef family protein	NA	A0A0A7NPZ4	Enterobacteria_phage	100.0	7.0e-19
AUM21639.1|1444556_1444817_-	hypothetical protein	NA	NA	NA	NA	NA
AUM21640.1|1446819_1448033_-|transposase	IS3 family transposase	transposase	Q6H9S6	Enterobacteria_phage	99.7	3.4e-170
AUM21641.1|1448181_1448505_-|tail	phage tail protein	tail	A0A0A7NQ97	Enterobacteria_phage	100.0	1.1e-43
AUM21642.1|1448662_1449847_+|tail	phage tail sheath family protein	tail	A0A0A7NV69	Enterobacteria_phage	99.0	8.1e-225
AUM21643.1|1449846_1450359_+|tail	phage major tail tube protein	tail	A0A0A7NPV8	Enterobacteria_phage	100.0	3.2e-93
AUM21644.1|1450413_1450779_+|tail	phage tail protein	tail	A0A0A7NPZ0	Enterobacteria_phage	98.3	1.7e-56
AUM21645.1|1450706_1450943_+|tail	GpE family phage tail protein	tail	A0A0A7NQ96	Enterobacteria_phage	96.1	1.9e-21
AUM21646.1|1450929_1453737_+|tail	phage tail tape measure protein	tail	A0A0A7NRZ9	Enterobacteria_phage	95.8	0.0e+00
AUM21647.1|1453743_1454238_+|tail	phage tail protein	tail	A0A0A7NV65	Enterobacteria_phage	99.4	1.1e-85
AUM25090.1|1454490_1454967_+	serine acetyltransferase	NA	NA	NA	NA	NA
AUM21648.1|1455010_1455589_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	88.5	2.9e-95
AUM21649.1|1455588_1458051_-|tail	phage tail protein	tail	A0A0A7NV63	Enterobacteria_phage	97.2	8.1e-110
AUM21650.1|1458053_1458584_-|tail	phage tail protein I	tail	A0A0A7NPV1	Enterobacteria_phage	99.4	5.1e-94
AUM21651.1|1458576_1459473_-|plate	baseplate assembly protein	plate	A0A0A7NPY5	Enterobacteria_phage	97.7	1.1e-154
AUM21652.1|1459476_1459827_-|plate	baseplate assembly protein	plate	A0A0A7NQ90	Enterobacteria_phage	99.1	2.7e-59
AUM21653.1|1459900_1461113_+|transposase	IS3 family transposase	transposase	Q6H9S6	Enterobacteria_phage	99.7	3.4e-170
AUM21654.1|1462206_1463364_+	4-phosphoerythronate dehydrogenase PdxB	NA	A0A2R8FDS8	Brazilian_cedratvirus	29.3	1.7e-22
AUM21655.1|1463429_1464443_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AUM21656.1|1464442_1465255_+|tRNA	tRNA pseudouridine(38-40) synthase	tRNA	NA	NA	NA	NA
AUM21657.1|1465337_1465997_+	protein DedA	NA	NA	NA	NA	NA
AUM21658.1|1466152_1467067_+	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA	NA
AUM21659.1|1467136_1468405_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
AUM21660.1|1468394_1469057_+	cell division protein DedD	NA	NA	NA	NA	NA
AUM21661.1|1469315_1469804_+	colicin V production protein	NA	NA	NA	NA	NA
AUM21662.1|1469840_1471358_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	44.0	5.9e-87
AUM21663.1|1471452_1472022_+	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA	NA	NA	NA	NA
AUM21664.1|1472287_1473070_+	lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT	NA	NA	NA	NA	NA
AUM21665.1|1473290_1474073_+	histidine ABC transporter substrate-binding protein HisJ	NA	NA	NA	NA	NA
AUM21666.1|1474162_1474849_+	histidine ABC transporter permease	NA	NA	NA	NA	NA
AUM21667.1|1474845_1475562_+	histidine ABC transporter permease	NA	NA	NA	NA	NA
AUM21668.1|1475569_1476343_+	histidine transport ATP-binding protein HisP	NA	M1I0T9	Acanthocystis_turfacea_Chlorella_virus	28.2	2.1e-08
AUM21669.1|1476539_1477430_+|transposase	ISNCY family transposase	transposase	Q2A0A7	Sodalis_phage	43.9	1.2e-66
>prophage 3
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	1662953	1761724	5143533	holin,capsid,integrase,head,tRNA,terminase,tail,lysis,transposase	Enterobacteria_phage(37.33%)	103	1679796:1679816	1736218:1736238
AUM21826.1|1662953_1663649_-|lysis	CidB/LrgB family autolysis modulator	lysis	NA	NA	NA	NA
AUM21827.1|1663645_1664044_-	hypothetical protein	NA	NA	NA	NA	NA
AUM25099.1|1664283_1665234_+|tRNA	tRNA dihydrouridine(16) synthase DusC	tRNA	NA	NA	NA	NA
AUM21828.1|1665621_1665705_-	hypothetical protein	NA	NA	NA	NA	NA
AUM21829.1|1665928_1667365_+	multidrug transporter permease	NA	NA	NA	NA	NA
AUM21830.1|1667417_1668179_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
AUM21831.1|1668308_1668887_-	DedA family protein	NA	NA	NA	NA	NA
AUM21832.1|1669056_1669644_+	YIP1 family protein	NA	NA	NA	NA	NA
AUM21833.1|1669817_1670750_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
AUM21834.1|1670787_1672503_-	D-lactate dehydrogenase	NA	NA	NA	NA	NA
AUM21835.1|1672698_1674996_+	beta-glucosidase BglX	NA	NA	NA	NA	NA
AUM21836.1|1675247_1676165_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUM21837.1|1676171_1677329_+	osmoprotectant uptake system permease	NA	NA	NA	NA	NA
AUM21838.1|1677321_1678248_+	ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.8	1.7e-23
AUM21839.1|1678252_1678984_+	osmoprotectant uptake system permease	NA	NA	NA	NA	NA
AUM21840.1|1678964_1679072_-	hypothetical protein	NA	NA	NA	NA	NA
AUM21841.1|1679131_1679833_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.5	3.9e-102
1679796:1679816	attL	CACGCGCGTAACGTGACAGGG	NA	NA	NA	NA
AUM21842.1|1679853_1681140_-|integrase	site-specific integrase	integrase	Q9EY96	Enterobacteria_phage	100.0	7.6e-253
AUM21843.1|1681173_1681428_-	excisionase	NA	Q859D3	Escherichia_coli_phage	100.0	3.0e-44
AUM21844.1|1681446_1681581_-	hypothetical protein	NA	A0A0P0ZDP5	Stx2-converting_phage	100.0	4.9e-22
AUM21845.1|1681584_1681827_-	DUF4222 domain-containing protein	NA	B6DZ51	Enterobacteria_phage	100.0	1.5e-37
AUM25100.1|1681914_1682175_-	DUF551 domain-containing protein	NA	A5LH60	Enterobacteria_phage	82.3	1.5e-43
AUM21846.1|1682665_1683436_-	hypothetical protein	NA	Q6H9Z5	Enterobacteria_phage	98.8	6.2e-141
AUM21847.1|1683432_1683654_-	conjugal transfer protein TraR	NA	A0A1I9LJM6	Stx_converting_phage	100.0	2.9e-35
AUM21848.1|1683752_1684034_-	hypothetical protein	NA	A0A0P0ZE02	Stx2-converting_phage	98.9	7.2e-47
AUM21849.1|1684044_1684236_-	hypothetical protein	NA	A0A0P0ZC67	Stx2-converting_phage	98.4	2.1e-26
AUM25101.1|1684208_1684391_-	DUF1317 domain-containing protein	NA	A0A1U8QQC1	Enterobacteria_phage	96.7	6.9e-27
AUM21850.1|1684387_1685068_-	exonuclease	NA	B6DZ61	Enterobacteria_phage	98.2	3.0e-131
AUM21851.1|1685064_1685850_-	phage recombination protein Bet	NA	A0A1I9LJN0	Stx_converting_phage	100.0	6.3e-149
AUM21852.1|1685855_1686152_-	host-nuclease inhibitor protein Gam	NA	Q9EYA6	Enterobacteria_phage	100.0	4.3e-50
AUM21853.1|1686120_1686273_-	host-nuclease inhibitor protein Gam	NA	Q08J51	Stx2-converting_phage	96.0	2.4e-20
AUM21854.1|1686227_1686497_-	host cell division inhibitory peptide Kil	NA	A0A1U9AJ71	Stx1_converting_phage	100.0	1.3e-42
AUM21855.1|1686576_1686945_-	DUF2528 domain-containing protein	NA	A0A1U9AJB3	Stx1_converting_phage	100.0	2.0e-65
AUM21856.1|1687095_1687566_-	hypothetical protein	NA	A0A1U9AJ69	Stx1_converting_phage	100.0	1.7e-88
AUM21857.1|1687610_1688824_-|transposase	IS3 family transposase	transposase	Q6H9S6	Enterobacteria_phage	99.0	8.4e-169
AUM21858.1|1688937_1689321_-	antitermination protein	NA	G9L671	Escherichia_phage	100.0	3.9e-64
AUM21859.1|1689976_1691023_-	protein kinase	NA	G9L673	Escherichia_phage	99.4	1.3e-205
AUM21860.1|1691498_1692192_+|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM21861.1|1692318_1692660_-	DUF3024 domain-containing protein	NA	G9L675	Escherichia_phage	98.2	2.8e-61
AUM21862.1|1692720_1693428_-	phage repressor protein C	NA	G9L676	Escherichia_phage	100.0	1.5e-133
AUM21863.1|1693506_1693734_+	DNA-binding protein	NA	G9L677	Escherichia_phage	100.0	7.8e-36
AUM21864.1|1693872_1694169_+	hypothetical protein	NA	Q6H9X8	Enterobacteria_phage	100.0	5.2e-48
AUM21865.1|1694201_1695140_+	Replication protein O	NA	A0A1I9LJP3	Stx_converting_phage	100.0	1.3e-172
AUM21866.1|1695136_1695838_+	Replication protein P	NA	K7P6G2	Enterobacteria_phage	99.1	8.4e-129
AUM21867.1|1695834_1696125_+	protein ren	NA	A0A1I9LJP5	Stx_converting_phage	100.0	9.6e-47
AUM21868.1|1696180_1696639_+	recombination protein NinB	NA	M1FPM8	Enterobacteria_phage	100.0	1.6e-80
AUM21869.1|1696635_1697163_+	phage N-6-adenine-methyltransferase	NA	A0A1I9LJP9	Stx_converting_phage	98.9	2.3e-99
AUM21870.1|1697344_1698394_+	hypothetical protein	NA	Q9T208	Enterobacteria_phage	100.0	1.3e-181
AUM21871.1|1698545_1699268_+	DNA-binding protein	NA	O48426	Enterobacteria_phage	96.7	3.6e-127
AUM21872.1|1699267_1699873_+	protein NinG	NA	Q5TJL9	Enterobacteria_phage	99.0	8.1e-96
AUM21873.1|1699869_1700541_+	serine/threonine protein phosphatase	NA	Q5TJL8	Enterobacteria_phage	96.9	1.6e-129
AUM21874.1|1700531_1701020_+	antiterminator	NA	Q5TJL7	Enterobacteria_phage	99.4	7.7e-89
AUM21875.1|1702097_1703948_+	9-O-acetyl-N-acetylneuraminic acid deacetylase	NA	B6DZ89	Enterobacteria_phage	98.5	0.0e+00
AUM21876.1|1704071_1704233_-	hypothetical protein	NA	NA	NA	NA	NA
AUM21877.1|1704231_1704447_+|holin	holin	holin	A0A0P0ZC45	Stx2-converting_phage	98.6	7.7e-33
AUM21878.1|1704446_1704944_+	lysozyme	NA	A0A0N7KZA0	Stx2-converting_phage	97.0	2.4e-90
AUM21879.1|1704940_1705378_+|lysis	lysis protein	lysis	A0A0P0ZBQ9	Stx2-converting_phage	96.6	4.2e-70
AUM21880.1|1705580_1706078_+	DNA-binding protein	NA	A0A0P0ZBU2	Stx2-converting_phage	100.0	3.6e-94
AUM21881.1|1706074_1706332_+	hypothetical protein	NA	A0A0P0ZBT1	Stx2-converting_phage	100.0	5.0e-39
AUM21882.1|1706408_1706543_-	hypothetical protein	NA	NA	NA	NA	NA
AUM21883.1|1706794_1707022_-	DUF3950 domain-containing protein	NA	A0A0P0ZE23	Stx2-converting_phage	100.0	1.7e-35
AUM21884.1|1707063_1707429_+	HNH endonuclease	NA	B6ETE5	Enterobacteria_phage	99.2	4.0e-66
AUM21885.1|1707397_1707535_+	DNase	NA	H6WZK7	Escherichia_phage	75.0	6.6e-06
AUM21886.1|1707718_1708282_+|terminase	terminase small subunit	terminase	A0A0P0ZD56	Stx2-converting_phage	92.5	3.3e-83
AUM21887.1|1708278_1709940_+|terminase	terminase	terminase	A0A0P0ZEI4	Stx2-converting_phage	98.6	0.0e+00
AUM21888.1|1710003_1711941_+|capsid	phage major capsid protein	capsid	A0A0P0ZCT9	Stx2-converting_phage	100.0	0.0e+00
AUM25102.1|1711985_1712207_+	hypothetical protein	NA	A0A0P0ZD92	Stx2-converting_phage	100.0	5.8e-36
AUM21889.1|1714733_1715060_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A0P0ZDE0	Stx2-converting_phage	100.0	5.4e-54
AUM21890.1|1715070_1715421_+|head,tail	head-tail adaptor protein	head,tail	A0A0P0ZB28	Stx2-converting_phage	100.0	1.6e-59
AUM21891.1|1715417_1715864_+	hypothetical protein	NA	A0A0P0ZCD2	Stx2-converting_phage	98.6	5.2e-76
AUM21892.1|1715860_1716205_+	DUF3168 domain-containing protein	NA	A0A0P0ZC17	Stx2-converting_phage	100.0	1.4e-57
AUM21893.1|1716270_1716987_+|tail	phage tail protein	tail	B6DZA6	Enterobacteria_phage	99.6	2.8e-127
AUM21894.1|1717001_1717376_+|tail	phage tail protein	tail	A0A0P0ZE84	Stx2-converting_phage	99.2	1.7e-64
AUM21895.1|1717399_1717681_+	DUF4035 domain-containing protein	NA	H6WZM0	Escherichia_phage	98.9	2.3e-45
AUM21896.1|1720962_1721304_+|tail	phage tail protein	tail	A0A0P0ZBQ8	Stx2-converting_phage	97.3	4.7e-61
AUM21897.1|1721303_1722002_+|tail	phage minor tail protein L	tail	B6DZB1	Enterobacteria_phage	96.1	8.4e-129
AUM25103.1|1722018_1722339_-	Arc family DNA-binding protein	NA	A0A0P0ZBD1	Stx2-converting_phage	100.0	3.0e-49
AUM21898.1|1722446_1722620_+	Arc family DNA-binding protein	NA	A0A0P0ZC65	Stx2-converting_phage	100.0	3.4e-23
AUM21899.1|1723627_1724365_+|tail	phage tail protein	tail	A0A0P0ZDJ9	Stx2-converting_phage	92.2	1.1e-139
AUM21900.1|1724262_1724943_+|tail	tail assembly protein	tail	A0A0P0ZDX8	Stx2-converting_phage	96.4	4.1e-112
AUM21901.1|1725178_1728655_+|tail	phage tail protein	tail	A0A0P0ZCI5	Stx2-converting_phage	97.6	0.0e+00
AUM21902.1|1728721_1729321_+	Ail/Lom family protein	NA	A0A0P0ZCF6	Stx2-converting_phage	100.0	1.0e-111
AUM21903.1|1729385_1730699_+|tail	phage tail protein	tail	H6WZM9	Escherichia_phage	97.3	2.0e-75
AUM21904.1|1730700_1730970_+|tail	phage tail protein	tail	B6DZB8	Enterobacteria_phage	98.9	4.9e-45
AUM21905.1|1731080_1731662_+	hypothetical protein	NA	H6WZN1	Escherichia_phage	60.0	4.3e-54
AUM21906.1|1731993_1733238_-	hypothetical protein	NA	H6WZN2	Escherichia_phage	91.1	2.0e-229
AUM25104.1|1733890_1734919_-	secretion protein EspV	NA	Q6H9S1	Enterobacteria_phage	99.4	2.0e-195
AUM21907.1|1735087_1735781_+|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM21908.1|1736506_1738192_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	99.3	8.1e-303
1736218:1736238	attR	CACGCGCGTAACGTGACAGGG	NA	NA	NA	NA
AUM21909.1|1738188_1738908_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AUM21910.1|1738954_1739425_+	DUF1456 domain-containing protein	NA	Q9EYF4	Enterobacteria_phage	99.4	2.6e-81
AUM21911.1|1739464_1739926_-	DUF1307 domain-containing protein	NA	Q9EYF5	Enterobacteria_phage	99.3	2.4e-76
AUM21912.1|1740050_1741448_-	hypothetical protein	NA	Q9EYF6	Enterobacteria_phage	67.0	2.9e-237
AUM21913.1|1741444_1742581_-	hypothetical protein	NA	Q9EYF7	Enterobacteria_phage	97.1	4.2e-162
AUM21914.1|1742573_1744853_-	hypothetical protein	NA	NA	NA	NA	NA
AUM21915.1|1744863_1745952_-	MoxR family ATPase	NA	NA	NA	NA	NA
AUM21916.1|1746257_1746575_-	hypothetical protein	NA	NA	NA	NA	NA
AUM21917.1|1754211_1756245_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.8e-54
AUM21918.1|1756376_1757486_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AUM21919.1|1757748_1758030_+	DUF2574 domain-containing protein	NA	NA	NA	NA	NA
AUM21920.1|1758321_1758864_+	hypothetical protein	NA	NA	NA	NA	NA
AUM21921.1|1758944_1759619_+	fimbrial assembly protein	NA	NA	NA	NA	NA
AUM21922.1|1761029_1761724_-|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	1778579	1812371	5143533	integrase,terminase,tail,lysis,transposase	Enterobacteria_phage(35.29%)	38	1784836:1784851	1813956:1813971
AUM21937.1|1778579_1779273_+|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM21938.1|1779278_1780286_+	galactitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA	NA
AUM21939.1|1780385_1781165_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
AUM21940.1|1781246_1782146_-	lipid kinase YegS	NA	NA	NA	NA	NA
AUM21941.1|1782559_1782877_+	hypothetical protein	NA	NA	NA	NA	NA
AUM21942.1|1782864_1783074_+	hypothetical protein	NA	NA	NA	NA	NA
AUM21943.1|1783207_1784569_-	U32 family peptidase	NA	Q6DW11	Phage_TP	99.5	1.6e-216
AUM21944.1|1784671_1784968_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
1784836:1784851	attL	TCAGAATCTGGAGAAC	NA	NA	NA	NA
AUM21945.1|1784969_1785266_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA	NA
AUM21946.1|1785474_1785807_-	DUF1508 domain-containing protein	NA	NA	NA	NA	NA
AUM21947.1|1785997_1786720_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	1.9e-30
AUM21948.1|1786716_1788120_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	29.0	3.0e-32
AUM21949.1|1788116_1789532_-	multidrug transporter subunit MdtD	NA	NA	NA	NA	NA
AUM21950.1|1789532_1792610_-	multidrug resistance protein MdtC	NA	NA	NA	NA	NA
AUM21951.1|1792610_1795733_-	multidrug transporter subunit MdtB	NA	NA	NA	NA	NA
AUM21952.1|1795732_1796980_-	multidrug resistance protein MdtA	NA	NA	NA	NA	NA
AUM21953.1|1797323_1798397_-|integrase	integrase	integrase	K7PHK0	Enterobacteria_phage	95.8	9.7e-193
AUM21954.1|1798374_1798593_-	excisionase	NA	Q77WA4	Escherichia_phage	100.0	3.7e-35
AUM21955.1|1798699_1799044_-	hypothetical protein	NA	K7PJY7	Enterobacterial_phage	99.1	1.5e-59
AUM21956.1|1800105_1801065_-	DUF2219 domain-containing protein	NA	NA	NA	NA	NA
AUM21957.1|1801402_1801525_+	hypothetical protein	NA	NA	NA	NA	NA
AUM21958.1|1801539_1802229_+	antitermination protein	NA	I6PDF8	Cronobacter_phage	48.1	1.5e-58
AUM21959.1|1802439_1803156_+	hypothetical protein	NA	NA	NA	NA	NA
AUM21960.1|1803699_1803927_+	DUF1737 domain-containing protein	NA	H6WZJ9	Escherichia_phage	90.4	4.2e-21
AUM21961.1|1804393_1804657_-	hypothetical protein	NA	NA	NA	NA	NA
AUM21962.1|1804782_1805316_+	lysozyme	NA	B6DZ92	Enterobacteria_phage	95.5	2.4e-99
AUM21963.1|1805438_1805654_+	hypothetical protein	NA	NA	NA	NA	NA
AUM21964.1|1805805_1806273_+|lysis	lysis protein	lysis	Q7AYI6	Enterobacteria_phage	87.7	2.1e-67
AUM21965.1|1806355_1806496_+	hypothetical protein	NA	NA	NA	NA	NA
AUM21966.1|1806736_1807051_+	PerC family transcriptional regulator	NA	NA	NA	NA	NA
AUM21967.1|1807132_1807357_-	DUF3950 domain-containing protein	NA	A0A0K2FIR8	Escherichia_phage	92.7	4.1e-21
AUM21968.1|1807751_1808249_+|terminase	terminase	terminase	A0A1I9KFT4	Aeromonas_phage	32.5	1.0e-11
AUM21969.1|1809408_1809675_+	hypothetical protein	NA	Q9ZXG3	Shigella_phage	95.5	1.6e-43
AUM21970.1|1809697_1810069_+|integrase	integrase	integrase	K7PH54	Enterobacteria_phage	95.1	1.1e-58
AUM21971.1|1810197_1810980_-	cell division protein	NA	A5LH49	Enterobacteria_phage	98.1	2.1e-144
AUM25105.1|1811086_1811272_+	hypothetical protein	NA	NA	NA	NA	NA
AUM21972.1|1811246_1812128_-	T3SS effector protein NleH	NA	A5LH48	Enterobacteria_phage	90.4	3.9e-147
AUM21973.1|1812233_1812371_-|tail	phage tail protein	tail	A0A2R2Z347	Escherichia_phage	95.6	3.7e-17
1813956:1813971	attR	TCAGAATCTGGAGAAC	NA	NA	NA	NA
>prophage 5
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	1853623	1861225	5143533		Enterobacteria_phage(33.33%)	8	NA	NA
AUM22005.1|1853623_1855018_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	31.8	4.9e-19
AUM22006.1|1855192_1856086_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.0	3.9e-46
AUM22007.1|1856122_1856398_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22008.1|1856458_1857544_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.8	3.6e-102
AUM22009.1|1857543_1858443_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.6	1.5e-29
AUM22010.1|1858500_1859391_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	63.7	1.4e-104
AUM22011.1|1859380_1860646_+	flippase	NA	NA	NA	NA	NA
AUM22012.1|1860658_1861225_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	57.8	1.9e-54
>prophage 6
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	1888287	2019924	5143533	holin,integrase,coat,head,portal,plate,terminase,protease,tail,lysis,transposase	Escherichia_phage(29.84%)	168	1885507:1885522	1977445:1977460
1885507:1885522	attL	TTTTGCGTTAATTCAG	NA	NA	NA	NA
AUM22038.1|1888287_1889466_+|integrase	integrase	integrase	A0A0P0ZDN8	Stx2-converting_phage	100.0	1.8e-232
AUM22039.1|1889446_1889638_-	AlpA family phage regulatory protein	NA	A0A0P0ZBL0	Stx2-converting_phage	100.0	1.7e-31
AUM22040.1|1889717_1890062_-	hypothetical protein	NA	K7PJY7	Enterobacterial_phage	99.1	1.5e-59
AUM25109.1|1890446_1890779_-	hypothetical protein	NA	A5LH60	Enterobacteria_phage	98.7	2.8e-42
AUM22041.1|1891281_1892052_-	hypothetical protein	NA	Q6H9Z5	Enterobacteria_phage	99.6	1.9e-142
AUM22042.1|1892048_1892270_-	conjugal transfer protein TraR	NA	A0A1I9LJM6	Stx_converting_phage	100.0	2.9e-35
AUM22043.1|1892368_1892650_-	hypothetical protein	NA	Q08J56	Stx2-converting_phage	98.9	2.5e-47
AUM22044.1|1892660_1892852_-	hypothetical protein	NA	A0A0P0ZC60	Stx2-converting_phage	100.0	5.6e-27
AUM22045.1|1893002_1893683_-	exonuclease	NA	Q6H9Z0	Enterobacteria_phage	99.6	1.3e-131
AUM22046.1|1893679_1894465_-	phage recombination protein Bet	NA	A0A0N7KZJ3	Stx2-converting_phage	99.6	5.3e-148
AUM22047.1|1894470_1894767_-	host-nuclease inhibitor protein Gam	NA	A0A1I9LJN1	Stx_converting_phage	99.0	6.2e-49
AUM22048.1|1894735_1894888_-	host-nuclease inhibitor protein Gam	NA	Q08J51	Stx2-converting_phage	96.0	2.4e-20
AUM22049.1|1894842_1895112_-	host cell division inhibitory peptide Kil	NA	M1FN78	Enterobacteria_phage	98.9	3.0e-42
AUM22050.1|1895337_1895781_-	hypothetical protein	NA	A0A1I9LJN4	Stx_converting_phage	100.0	4.9e-82
AUM22051.1|1895844_1896468_-	hypothetical protein	NA	K7PKU5	Enterobacteria_phage	97.1	2.8e-107
AUM22052.1|1896873_1897266_-	regulator	NA	Q76H58	Enterobacteria_phage	67.6	1.2e-28
AUM22053.1|1897180_1897384_+	hypothetical protein	NA	NA	NA	NA	NA
AUM25110.1|1897534_1898230_-	phage repressor	NA	A0A0N7BTS4	Escherichia_phage	96.5	1.3e-129
AUM22054.1|1898305_1898521_+	XRE family transcriptional regulator	NA	A0A0N7C2U7	Escherichia_phage	100.0	2.2e-35
AUM22055.1|1898630_1898927_+	hypothetical protein	NA	G9L678	Escherichia_phage	95.9	3.7e-46
AUM22056.1|1898949_1899222_+	hypothetical protein	NA	G9L679	Escherichia_phage	98.9	3.0e-42
AUM22057.1|1899224_1900172_+	replication protein	NA	A5VW95	Enterobacteria_phage	96.8	2.4e-150
AUM22058.1|1900168_1901545_+	replicative DNA helicase	NA	A0A0P0ZC27	Stx2-converting_phage	99.6	2.2e-253
AUM22059.1|1902026_1902242_+	hypothetical protein	NA	A0A1I9LJP7	Stx_converting_phage	100.0	1.3e-32
AUM22060.1|1902252_1902489_+	restriction alleviation protein, Lar family	NA	Q8HA09	Enterobacteria_phage	100.0	1.2e-39
AUM22061.1|1902445_1902892_+	protein ninB	NA	A0A0P0ZEG6	Stx2-converting_phage	99.3	2.4e-81
AUM22062.1|1902888_1903416_+	phage N-6-adenine-methyltransferase	NA	H6WZI7	Escherichia_phage	98.9	1.0e-99
AUM22063.1|1903412_1903589_+	NinE family protein	NA	A5VW90	Enterobacteria_phage	100.0	4.6e-28
AUM22064.1|1903591_1903993_+	hypothetical protein	NA	G9L690	Escherichia_phage	96.2	6.6e-70
AUM22065.1|1903952_1904162_+	protein ninF	NA	G9L691	Escherichia_phage	95.7	2.6e-30
AUM22066.1|1904154_1904877_+	DNA-binding protein	NA	A0A0P0ZCB2	Stx2-converting_phage	99.2	1.5e-128
AUM22067.1|1904876_1905482_+	protein NinG	NA	Q5TJL9	Enterobacteria_phage	98.0	1.2e-96
AUM22068.1|1905478_1906150_+	serine/threonine protein phosphatase	NA	Q5TJL8	Enterobacteria_phage	96.9	1.6e-129
AUM22069.1|1906140_1906659_+	antiterminator	NA	Q716B8	Shigella_phage	100.0	9.0e-96
AUM22070.1|1907167_1907491_+|holin	phage holin, lambda family	holin	G5DA93	Enterobacteria_phage	100.0	1.3e-52
AUM22071.1|1907474_1907951_+	lysozyme	NA	A5VW81	Enterobacteria_phage	99.4	3.7e-88
AUM22072.1|1907947_1908385_+|lysis	lysis protein	lysis	A0A220NRM0	Escherichia_phage	95.9	1.6e-69
AUM22073.1|1908372_1908525_+	hypothetical protein	NA	C6ZR68	Salmonella_phage	100.0	1.2e-21
AUM22074.1|1908603_1908891_+	hypothetical protein	NA	A0A1P8DTP0	Salmonella_phage	60.0	1.8e-29
AUM22075.1|1909567_1909810_+	DUF2560 domain-containing protein	NA	A5VW77	Enterobacteria_phage	78.8	7.6e-29
AUM22076.1|1909889_1910315_+	ubiquitin carboxyl-hydrolase	NA	Q716H4	Shigella_phage	87.9	1.8e-65
AUM22077.1|1910311_1911727_+|terminase	PBSX family phage terminase large subunit	terminase	A5VW75	Enterobacteria_phage	99.6	1.3e-277
AUM22078.1|1911728_1913927_+|portal	portal protein	portal	A0A088CQ69	Enterobacteria_phage	99.2	0.0e+00
AUM22079.1|1914017_1914911_+	scaffolding protein	NA	A0A088CPT0	Enterobacteria_phage	99.7	6.7e-131
AUM22080.1|1914929_1916183_+|coat	coat protein	coat	A5VW72	Enterobacteria_phage	95.7	2.3e-225
AUM22081.1|1916224_1916413_+	hypothetical protein	NA	A0A088CPR7	Enterobacteria_phage	100.0	2.9e-28
AUM22082.1|1916393_1916855_+|head	head DNA stabilization protein	head	A5VW70	Enterobacteria_phage	98.7	6.0e-83
AUM22083.1|1916864_1918283_+	hypothetical protein	NA	Q9AYZ4	Salmonella_phage	91.3	2.6e-254
AUM22084.1|1918304_1918850_+	endodeoxyribonuclease	NA	A0A2H4FQU5	Salmonella_phage	54.4	1.5e-45
AUM22085.1|1918842_1919544_+|tail	phage tail protein	tail	A0A2D1GLK3	Escherichia_phage	98.7	7.9e-119
AUM22086.1|1919543_1919999_+	hypothetical protein	NA	A0A2D1GLX4	Escherichia_phage	100.0	1.8e-87
AUM22087.1|1920001_1920691_+	DNA transfer protein	NA	G5DA80	Enterobacteria_phage	94.3	1.8e-107
AUM22088.1|1920700_1922077_+	acyltransferase	NA	I6RSG0	Salmonella_phage	74.6	4.9e-181
AUM22089.1|1922076_1923999_+	DNA transfer protein	NA	I6R973	Salmonella_phage	83.1	8.4e-288
AUM25111.1|1924023_1924392_-	hypothetical protein	NA	I6S5X4	Salmonella_phage	99.2	1.7e-64
AUM22090.1|1924530_1924950_+	hypothetical protein	NA	B9UDL3	Salmonella_phage	97.8	1.5e-72
AUM22091.1|1925006_1925543_-|protease	Clp protease	protease	NA	NA	NA	NA
AUM22092.1|1925542_1925797_-	Arc family DNA-binding protein	NA	A0A2H4FVY6	Salmonella_phage	84.1	4.1e-33
AUM22093.1|1925887_1926049_+	Arc family DNA-binding protein	NA	A8CG91	Salmonella_phage	98.1	2.7e-22
AUM25112.1|1926117_1926996_+	phage repressor protein/antirepressor Ant	NA	I6R977	Salmonella_phage	73.2	4.0e-88
AUM22094.1|1929174_1929306_+	umuD domain protein	NA	O64339	Escherichia_phage	64.3	4.0e-08
AUM22095.1|1931182_1932334_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.6	5.2e-43
AUM22096.1|1932824_1933883_+	FUSC family protein	NA	NA	NA	NA	NA
AUM22097.1|1934054_1934384_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22098.1|1934484_1934619_-	ethanolamine utilization protein	NA	NA	NA	NA	NA
AUM22099.1|1935551_1936764_+|transposase	IS3 family transposase	transposase	Q6H9S6	Enterobacteria_phage	99.7	3.4e-170
AUM22100.1|1938470_1938593_+	cobalamin biosynthesis protein	NA	NA	NA	NA	NA
AUM22101.1|1938744_1939290_+	adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase	NA	NA	NA	NA	NA
AUM22102.1|1939286_1940030_+	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA	NA
AUM22103.1|1940041_1941121_+	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA	NA
AUM22104.1|1941185_1942118_+	L,D-transpeptidase	NA	NA	NA	NA	NA
AUM22105.1|1942574_1943492_+	nitrogen assimilation regulatory protein nac	NA	NA	NA	NA	NA
AUM22106.1|1943593_1944544_+	transcriptional regulator Cbl	NA	NA	NA	NA	NA
AUM22107.1|1944817_1946305_+	MATE family multidrug exporter	NA	NA	NA	NA	NA
AUM22108.1|1946679_1946889_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22109.1|1946933_1947650_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AUM22110.1|1947992_1949447_-	AMP nucleosidase	NA	NA	NA	NA	NA
AUM22111.1|1949548_1950865_-	MFS transporter	NA	NA	NA	NA	NA
AUM22112.1|1951179_1952232_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22113.1|1955789_1957003_-|transposase	IS3 family transposase	transposase	A0A0N7C1X7	Escherichia_phage	98.0	3.5e-167
AUM25113.1|1961371_1962169_-	protein MtfA	NA	NA	NA	NA	NA
AUM22114.1|1963108_1963534_+	Rha family transcriptional regulator	NA	NA	NA	NA	NA
AUM25114.1|1964682_1965429_+	DNA replication protein DnaC	NA	A0A088CBP4	Shigella_phage	82.8	1.8e-113
AUM22115.1|1965450_1966167_+	DUF1627 domain-containing protein	NA	A0A0U2SAW4	Escherichia_phage	62.6	2.1e-71
AUM25115.1|1966199_1966481_+	DNA-binding protein	NA	A0A222YXX1	Escherichia_phage	73.6	1.0e-29
AUM22116.1|1966477_1966705_+	hypothetical protein	NA	A0A1B5FPG2	Escherichia_phage	49.3	5.1e-11
AUM22117.1|1966697_1967009_+	hypothetical protein	NA	A0A0U2QV73	Escherichia_phage	92.2	7.2e-56
AUM22118.1|1967355_1967913_+	DUF551 domain-containing protein	NA	A0A0N7KZV3	Escherichia_phage	41.7	2.8e-34
AUM22119.1|1968146_1968359_+	Hok/Gef family protein	NA	A0A0P0ZAX5	Stx2-converting_phage	100.0	6.0e-30
AUM22120.1|1968478_1968823_+	TIGR00156 family protein	NA	A0A1I9LJU6	Stx_converting_phage	99.1	6.1e-56
AUM22121.1|1968944_1969217_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22122.1|1969218_1970268_+	DUF968 domain-containing protein	NA	U5P0K4	Shigella_phage	54.3	3.4e-110
AUM22123.1|1970280_1970640_+	RusA family crossover junction endodeoxyribonuclease	NA	V5URS4	Shigella_phage	63.5	5.0e-37
AUM22124.1|1970648_1971203_+	DUF1133 domain-containing protein	NA	A0A0U2S606	Escherichia_phage	66.9	6.8e-65
AUM22125.1|1971427_1971625_+	TrmB family transcriptional regulator	NA	S5MQK8	Escherichia_phage	95.4	7.5e-27
AUM22126.1|1971759_1972473_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AUM22127.1|1973226_1973964_-	protein mom	NA	A0A0C4UQZ7	Shigella_phage	79.0	7.5e-104
AUM22128.1|1973917_1974118_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AUM25116.1|1974385_1974697_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22129.1|1974735_1974981_-	DUF826 domain-containing protein	NA	NA	NA	NA	NA
AUM22130.1|1975016_1975199_-	DUF1378 domain-containing protein	NA	S5MBZ5	Escherichia_phage	54.4	1.3e-09
AUM22131.1|1975345_1977385_-	sialate O-acetylesterase	NA	S5MDQ7	Escherichia_phage	79.4	4.3e-274
AUM22132.1|1977484_1978045_-	DNA-invertase	NA	A0A0C4UR34	Shigella_phage	75.7	4.3e-75
1977445:1977460	attR	TTTTGCGTTAATTCAG	NA	NA	NA	NA
AUM22133.1|1978058_1978244_-	hypothetical protein	NA	NA	NA	NA	NA
AUM25117.1|1978266_1978470_+|tail	phage tail protein	tail	NA	NA	NA	NA
AUM22134.1|1978549_1979071_+|tail	phage tail protein	tail	A0A0U2QV64	Escherichia_phage	52.6	2.1e-47
AUM22135.1|1979105_1980017_-|tail	phage tail protein	tail	C9DGQ8	Escherichia_phage	47.5	2.9e-36
AUM22136.1|1980016_1980577_-	DUF2313 domain-containing protein	NA	C9DGQ7	Escherichia_phage	48.1	2.3e-44
AUM22137.1|1980567_1981653_-	hypothetical protein	NA	A0A0C4UQU9	Shigella_phage	53.2	1.1e-98
AUM22138.1|1981649_1982087_-	hypothetical protein	NA	A0A0C4UR04	Shigella_phage	53.5	1.9e-38
AUM22139.1|1982079_1982694_-|plate	phage baseplate assembly protein V	plate	A0A0C4UQZ3	Shigella_phage	51.0	4.7e-51
AUM22140.1|1982683_1983808_-|tail	phage tail protein	tail	C9DGQ3	Escherichia_phage	48.5	2.9e-91
AUM22141.1|1983791_1985162_-	multidrug DMT transporter permease	NA	C9DGQ2	Escherichia_phage	33.1	1.0e-53
AUM22142.1|1985127_1987203_-|tail	tail tape measure protein	tail	A0A0C4UQU8	Shigella_phage	37.7	3.7e-71
AUM22143.1|1987205_1987388_-	hypothetical protein	NA	C9DGQ0	Escherichia_phage	54.8	3.2e-08
AUM22144.1|1987329_1987806_-	hypothetical protein	NA	A0A0C4UR03	Shigella_phage	50.8	1.0e-21
AUM22145.1|1987820_1988186_-|tail	phage tail protein	tail	C9DGP8	Escherichia_phage	51.7	2.0e-25
AUM22146.1|1988194_1989697_-|tail	phage tail protein	tail	C9DGP7	Escherichia_phage	51.3	5.6e-138
AUM22147.1|1989693_1989939_-	DUF2635 domain-containing protein	NA	C9DGP6	Escherichia_phage	54.5	2.8e-07
AUM22148.1|1989939_1990500_-	DUF1834 domain-containing protein	NA	A0A0C4UQU7	Shigella_phage	47.7	1.1e-41
AUM22149.1|1990496_1990916_-	DUF1320 domain-containing protein	NA	A0A0C4UR02	Shigella_phage	53.6	4.7e-34
AUM22150.1|1990912_1991323_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22151.1|1991366_1992314_-|head	head protein	head	A0A0C4UQR9	Shigella_phage	67.2	1.2e-122
AUM22152.1|1992313_1993438_-|protease	protease	protease	A0A0C4UQU6	Shigella_phage	47.9	2.9e-78
AUM22153.1|1993614_1994088_-	phage virion morphogenesis protein	NA	A0A0C4UR01	Shigella_phage	54.6	2.7e-38
AUM22154.1|1994209_1995541_-|head	phage head morphogenesis protein	head	A0A0C4UQY9	Shigella_phage	58.8	3.9e-151
AUM25118.1|1995524_1997114_-	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	57.7	1.4e-168
AUM22155.1|1997113_1998778_-	hypothetical protein	NA	A0A0C4UR29	Shigella_phage	73.2	8.1e-231
AUM22156.1|1998777_1999359_-	DUF3486 domain-containing protein	NA	A0A0C4UQU5	Shigella_phage	57.0	1.9e-49
AUM22157.1|1999361_1999652_-	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	63.2	4.7e-25
AUM22158.1|1999648_1999957_-	DUF2730 domain-containing protein	NA	NA	NA	NA	NA
AUM22159.1|1999937_2000165_-	conjugal transfer protein TraR	NA	NA	NA	NA	NA
AUM25119.1|2000174_2000621_-	lysozyme	NA	B6SD19	Bacteriophage	48.0	1.2e-11
AUM22160.1|2000839_2001340_-	endolysin	NA	B6SD29	Bacteriophage	42.6	3.0e-27
AUM22161.1|2001411_2001837_-	transcriptional regulator	NA	NA	NA	NA	NA
AUM22162.1|2001906_2002416_-	DUF1018 domain-containing protein	NA	A0A0C4UQU3	Shigella_phage	41.9	1.1e-26
AUM22163.1|2002412_2002709_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22164.1|2002698_2002896_-	hypothetical protein	NA	A0A291AXE7	Shigella_phage	34.5	1.2e-05
AUM25120.1|2002888_2003221_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22165.1|2003236_2003605_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22166.1|2003601_2003913_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22167.1|2003909_2004461_-	AsnC family protein	NA	NA	NA	NA	NA
AUM22168.1|2004464_2004980_-	hypothetical protein	NA	C9DGM0	Escherichia_phage	55.4	1.2e-47
AUM22169.1|2004979_2005513_-	hypothetical protein	NA	A0A0C4UQU2	Shigella_phage	66.7	5.9e-66
AUM22170.1|2005516_2006059_-	hypothetical protein	NA	A0A0C4UQZ6	Shigella_phage	40.0	2.9e-28
AUM22171.1|2006156_2006687_-	host-nuclease inhibitor protein Gam	NA	C9DGL8	Escherichia_phage	57.1	1.9e-48
AUM22172.1|2006698_2006992_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22173.1|2006996_2007269_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22174.1|2007265_2007547_-	host nuclease inhibitor protein	NA	I6WB15	Burkholderia_virus	47.4	2.8e-11
AUM22175.1|2007548_2007803_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22176.1|2007815_2008037_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22177.1|2008039_2008972_-	transcriptional regulator	NA	A0A0C4UQR3	Shigella_phage	48.3	1.2e-69
AUM22178.1|2009043_2011134_-|transposase	transposase	transposase	A0A2D1GNK9	Pseudomonas_phage	47.4	4.0e-166
AUM22179.1|2011135_2011384_-	transcriptional regulator	NA	A0A2D1GNH1	Pseudomonas_phage	73.2	1.3e-28
AUM22180.1|2011551_2012136_+	hypothetical protein	NA	A0A2D1GNR8	Pseudomonas_phage	39.8	4.2e-17
AUM22181.1|2012412_2012667_+	hypothetical protein	NA	H6WZJ6	Escherichia_phage	98.8	1.0e-36
AUM22182.1|2012557_2012824_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22183.1|2013144_2015082_+	sialate O-acetylesterase	NA	A0A0P0ZBP4	Stx2-converting_phage	96.9	0.0e+00
AUM22184.1|2015217_2015397_+	DUF1378 domain-containing protein	NA	A0A0P0ZCJ7	Stx2-converting_phage	100.0	3.7e-25
AUM22185.1|2015437_2015683_+	DUF826 domain-containing protein	NA	A0A0P0ZGR2	Escherichia_phage	100.0	8.8e-17
AUM22186.1|2015760_2015976_+|holin	holin	holin	A0A2R2Z340	Escherichia_phage	100.0	1.2e-33
AUM22187.1|2015980_2016514_+	lysozyme	NA	A0A1I9LJR4	Stx_converting_phage	97.7	1.3e-100
AUM22188.1|2016788_2017358_+	hypothetical protein	NA	A0A2R2Z339	Escherichia_phage	99.5	1.5e-104
AUM22189.1|2017514_2017982_+|lysis	lysis protein	lysis	Q7AYI6	Enterobacteria_phage	87.7	2.1e-67
AUM22190.1|2018064_2018205_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22191.1|2018445_2018760_+	PerC family transcriptional regulator	NA	NA	NA	NA	NA
AUM22192.1|2019128_2019371_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22193.1|2019393_2019924_-	cytochrome b	NA	A0A0U2QLA7	Escherichia_phage	99.1	1.6e-55
>prophage 7
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	2417554	2422873	5143533		Escherichia_phage(28.57%)	9	NA	NA
AUM25139.1|2417554_2417983_+	DUF1076 domain-containing protein	NA	B6DZB9	Enterobacteria_phage	42.1	1.4e-22
AUM25140.1|2418588_2418807_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22578.1|2419401_2419506_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22579.1|2419695_2419908_+	type I toxin-antitoxin system hok family toxin	NA	A0A0U2QV81	Escherichia_phage	92.9	6.8e-26
AUM22580.1|2420075_2420354_+	hypothetical protein	NA	I6PCV7	Cronobacter_phage	46.9	4.8e-11
AUM22581.1|2420355_2421405_+	DUF968 domain-containing protein	NA	U5P0K4	Shigella_phage	53.4	1.9e-108
AUM22582.1|2421417_2421777_+	hypothetical protein	NA	V5URS4	Shigella_phage	61.1	6.8e-34
AUM22583.1|2421773_2422463_+	antiterminator	NA	I6PDF8	Cronobacter_phage	47.6	2.7e-55
AUM25141.1|2422675_2422873_+	TrmB family transcriptional regulator	NA	S5MQK8	Escherichia_phage	96.9	6.8e-28
>prophage 8
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	2551299	2606962	5143533	holin,head,tail,lysis,capsid,transposase	Stx2-converting_phage(45.71%)	55	NA	NA
AUM22685.1|2551299_2552436_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
AUM22686.1|2552953_2553187_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22687.1|2556999_2558658_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	25.2	8.3e-26
AUM22688.1|2559237_2559932_-|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM22689.1|2560156_2560369_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22690.1|2560444_2561062_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
AUM22691.1|2561328_2562828_+	L-asparagine permease	NA	NA	NA	NA	NA
AUM22692.1|2562942_2564004_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22693.1|2564086_2564212_+	tonB-dependent receptor yncD	NA	NA	NA	NA	NA
AUM25145.1|2564151_2564331_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22694.1|2564245_2566348_+	TonB-dependent siderophore receptor	NA	A0A1B0VCF0	Salmonella_phage	65.6	1.1e-134
AUM22695.1|2566383_2567049_-	colanic acid/biofilm transcriptional regulator	NA	NA	NA	NA	NA
AUM22696.1|2567588_2568283_-|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM22697.1|2568348_2568819_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22698.1|2568862_2570908_-	peptidyl-dipeptidase Dcp	NA	NA	NA	NA	NA
AUM25146.1|2570814_2571033_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22699.1|2571044_2571791_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AUM22700.1|2571879_2572566_+	transcriptional regulator	NA	NA	NA	NA	NA
AUM22701.1|2572743_2572947_+	selenoprotein YdfZ	NA	J9Q802	Salmonella_phage	55.2	1.6e-11
AUM25147.1|2574937_2575246_+	hypothetical protein	NA	B6ETE1	Enterobacteria_phage	99.0	2.6e-50
AUM22702.1|2575279_2575588_+	T3SS effector protein NleG8	NA	A0A0P0ZBX1	Stx2-converting_phage	98.0	1.0e-54
AUM22703.1|2575812_2576688_-	secretion protein EspS	NA	A0A0P0ZCT1	Stx2-converting_phage	99.3	2.1e-161
AUM22704.1|2576828_2577098_-|tail	phage tail protein	tail	Q6H9S8	Enterobacteria_phage	97.8	3.2e-44
AUM22705.1|2577099_2578413_-|tail	phage tail protein	tail	H6WZM9	Escherichia_phage	97.9	4.8e-77
AUM22706.1|2578477_2579077_-	Ail/Lom family protein	NA	H6WZM8	Escherichia_phage	94.0	4.2e-105
AUM22707.1|2579143_2582536_-|tail	phage tail protein	tail	A0A0P0ZDT4	Stx2-converting_phage	88.3	0.0e+00
AUM22708.1|2582669_2583197_+	superoxide dismutase	NA	Q9MC02	Salmonella_phage	60.5	1.8e-59
AUM22709.1|2583227_2583431_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22710.1|2583384_2584065_-|tail	tail assembly protein	tail	Q6H9T3	Enterobacteria_phage	91.2	2.3e-107
AUM22711.1|2583962_2584706_-|tail	phage tail protein	tail	Q9EYE4	Enterobacteria_phage	94.7	5.4e-142
AUM22712.1|2584716_2585415_-|tail	phage minor tail protein L	tail	A0A0P0ZBE3	Stx2-converting_phage	96.1	1.9e-128
AUM22713.1|2585414_2585756_-|tail	phage tail protein	tail	A0A0P0ZCS8	Stx2-converting_phage	100.0	8.7e-63
AUM22714.1|2585748_2588991_-|tail	phage tail tape measure protein	tail	A0A0P0ZCJ4	Stx2-converting_phage	92.0	0.0e+00
AUM22715.1|2589038_2589320_-	DUF4035 domain-containing protein	NA	H6WZM0	Escherichia_phage	100.0	7.9e-46
AUM22716.1|2589343_2589718_-|tail	phage tail protein	tail	A0A0P0ZE84	Stx2-converting_phage	100.0	4.6e-65
AUM22717.1|2589732_2590449_-|tail	phage tail protein	tail	B6DZA6	Enterobacteria_phage	99.6	2.8e-127
AUM22718.1|2590514_2590859_-	DUF3168 domain-containing protein	NA	A0A0P0ZC17	Stx2-converting_phage	100.0	1.4e-57
AUM22719.1|2590855_2591302_-	hypothetical protein	NA	A0A0P0ZCD2	Stx2-converting_phage	98.6	5.2e-76
AUM22720.1|2591298_2591649_-|head,tail	head-tail adaptor protein	head,tail	A0A0P0ZB28	Stx2-converting_phage	100.0	1.6e-59
AUM22721.1|2591659_2591986_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A0P0ZDE0	Stx2-converting_phage	100.0	5.4e-54
AUM22722.1|2594512_2594734_-	hypothetical protein	NA	A0A0P0ZD92	Stx2-converting_phage	100.0	5.8e-36
AUM22723.1|2594778_2596716_-|capsid	phage major capsid protein	capsid	H6WZL0	Escherichia_phage	99.2	0.0e+00
AUM22724.1|2597736_2598102_-	HNH endonuclease	NA	A0A0P0ZCH0	Stx2-converting_phage	100.0	2.0e-65
AUM22725.1|2598143_2598371_+	DUF3950 domain-containing protein	NA	A0A0P0ZCA1	Stx2-converting_phage	100.0	3.9e-35
AUM22726.1|2598739_2598964_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22727.1|2598960_2599455_-|lysis	lysis protein	lysis	Q9ZXB6	Enterobacteria_phage	93.8	4.0e-77
AUM22728.1|2599456_2599675_-	hypothetical protein	NA	Q687G2	Enterobacteria_phage	93.3	1.0e-16
AUM22729.1|2599752_2600286_-	lysozyme	NA	A0A0N7KZF9	Stx2-converting_phage	98.3	2.8e-100
AUM22730.1|2600336_2600681_-	DUF1327 domain-containing protein	NA	A0A0P0ZD64	Stx2-converting_phage	100.0	1.0e-58
AUM22731.1|2600685_2600901_-|holin	holin	holin	Q6H9V8	Enterobacteria_phage	98.6	7.7e-33
AUM22732.1|2601339_2603190_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	NA	B6DZ89	Enterobacteria_phage	98.5	0.0e+00
AUM22733.1|2603238_2603367_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22734.1|2603511_2603778_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22735.1|2605303_2605516_-	Hok/Gef family protein	NA	A0A0U2QV81	Escherichia_phage	72.9	1.3e-16
AUM22736.1|2605593_2606962_+|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	99.5	6.3e-112
>prophage 9
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	2831450	2941900	5143533	holin,capsid,integrase,head,tRNA,terminase,protease,tail,lysis,transposase	Enterobacteria_phage(32.91%)	134	2835600:2835615	2954530:2954545
AUM22927.1|2831450_2832144_+|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM25158.1|2832308_2833220_+	hemolysin HlyE	NA	NA	NA	NA	NA
AUM22928.1|2833426_2833888_-	YcgN family cysteine cluster protein	NA	NA	NA	NA	NA
AUM22929.1|2833964_2834624_-	isomerase/hydrolase	NA	NA	NA	NA	NA
AUM22930.1|2834695_2834989_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22931.1|2835230_2835632_+	inhibitor of g-type lysozyme	NA	NA	NA	NA	NA
2835600:2835615	attL	AAAAAATATAACGTCG	NA	NA	NA	NA
AUM22932.1|2835751_2836120_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22933.1|2836275_2836503_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22934.1|2836642_2837338_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
AUM22935.1|2837361_2838174_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
AUM22936.1|2838177_2838444_+	cell division topological specificity factor	NA	NA	NA	NA	NA
AUM25159.1|2839273_2839459_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22937.1|2839559_2839733_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22938.1|2839734_2840079_+	glycine zipper family protein	NA	NA	NA	NA	NA
AUM22939.1|2840088_2840418_+	hypothetical protein	NA	NA	NA	NA	NA
AUM25160.1|2840474_2842796_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	A0A2L1IV18	Escherichia_phage	43.3	1.8e-90
AUM25161.1|2843374_2843518_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22940.1|2843522_2843741_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22941.1|2845725_2845974_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22942.1|2846086_2846353_-	RcsB connector protein for regulation of biofilm and acid-resistance	NA	NA	NA	NA	NA
AUM22943.1|2846381_2846654_-	two-component-system connector protein YmgA	NA	NA	NA	NA	NA
AUM22944.1|2846696_2846933_-	two-component-system connector protein YcgZ	NA	NA	NA	NA	NA
AUM22945.1|2847246_2848458_+	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AUM22946.1|2848662_2849394_+	helix-turn-helix-type transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	50.5	2.7e-53
AUM22947.1|2849614_2850019_+	DUF1398 domain-containing protein	NA	NA	NA	NA	NA
AUM22948.1|2850714_2851035_+	anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	64.7	1.1e-38
AUM22949.1|2851102_2851255_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	100.0	1.6e-21
AUM25162.1|2851734_2852172_+	acetyltransferase	NA	NA	NA	NA	NA
AUM22950.1|2852428_2852782_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AUM22951.1|2853064_2853445_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBP6	Stx2-converting_phage	100.0	1.4e-66
AUM22952.1|2853441_2853789_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	100.0	2.2e-61
AUM22953.1|2855391_2855601_-	hypothetical protein	NA	NA	NA	NA	NA
AUM22954.1|2855735_2856689_+|protease	outer membrane protease PgtE	protease	NA	NA	NA	NA
AUM22955.1|2856875_2858360_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AUM22956.1|2858543_2858849_-|tail	phage tail protein	tail	K7PMH7	Enterobacteria_phage	76.5	2.8e-12
AUM25163.1|2858947_2859574_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AUM22957.1|2860071_2860254_+	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA	NA
AUM22958.1|2860332_2860833_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
AUM22959.1|2860869_2861376_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22960.1|2861394_2862285_+	Mn-containing catalase	NA	NA	NA	NA	NA
AUM22961.1|2862404_2862986_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	94.8	1.5e-102
AUM22962.1|2862985_2866057_-|tail	phage tail protein	tail	U5N099	Enterobacteria_phage	82.1	1.9e-68
AUM22963.1|2866121_2866643_-|tail	phage tail tape measure protein	tail	A0A291AWV3	Escherichia_phage	100.0	2.2e-41
AUM22964.1|2868092_2868299_-|head,tail	Lambda prophage-derived head-to-tail joining protein W	head,tail	A0A2R9YJL2	Escherichia_phage	100.0	5.8e-30
AUM22965.1|2868295_2870221_-|terminase	terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	99.4	0.0e+00
AUM22966.1|2870195_2870741_-|terminase	terminase small subunit	terminase	A0A0K2FIG2	Enterobacteria_phage	98.3	3.1e-94
AUM22967.1|2871129_2871324_+	DUF3950 domain-containing protein	NA	A0A0K2FIR8	Escherichia_phage	96.9	3.7e-26
AUM22968.1|2871488_2871695_-	hypothetical protein	NA	A0A0K2FJ18	Enterobacteria_phage	100.0	5.8e-30
AUM22969.1|2871980_2872391_+	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	98.5	2.7e-71
AUM22970.1|2872682_2872976_+	lipoprotein bor	NA	K7PL54	Enterobacteria_phage	99.0	1.5e-47
AUM22971.1|2873007_2873469_-|lysis	lysis protein	lysis	A0A0K2FJD0	Enterobacteria_phage	100.0	1.9e-76
AUM22972.1|2873465_2873942_-	lysozyme	NA	K7PKV2	Enterobacteria_phage	96.8	1.0e-85
AUM22973.1|2873928_2874246_-|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	86.1	3.3e-40
AUM25164.1|2874555_2875101_-	antiterminator	NA	I6PDF8	Cronobacter_phage	49.7	3.4e-45
AUM22974.1|2875374_2875611_+	excisionase	NA	NA	NA	NA	NA
AUM22975.1|2875600_2876743_+|integrase	integrase	integrase	Q77Z02	Phage_21	99.4	1.2e-204
AUM22976.1|2876856_2878107_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	98.1	1.9e-22
AUM22977.1|2878278_2878932_+	23S rRNA pseudouridine synthase E	NA	NA	NA	NA	NA
AUM22978.1|2878941_2879403_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AUM22979.1|2879456_2880563_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
AUM25165.1|2880598_2881240_+	lysogenization protein HflD	NA	NA	NA	NA	NA
AUM22980.1|2881243_2882614_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	44.9	3.2e-108
AUM22981.1|2882782_2883454_+	two-component system response regulator PhoP	NA	NA	NA	NA	NA
AUM22982.1|2883453_2884914_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA	NA
AUM22983.1|2884989_2886111_+	50S ribosomal protein L16 arginine hydroxylase	NA	NA	NA	NA	NA
AUM22984.1|2886159_2887386_-	peptidase T	NA	NA	NA	NA	NA
AUM22985.1|2887441_2887657_+	hypothetical protein	NA	NA	NA	NA	NA
AUM22986.1|2887635_2888772_+	Fe3+/spermidine/putrescine ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	39.8	9.4e-29
AUM22987.1|2888755_2889619_+	spermidine/putrescine ABC transporter permease PotB	NA	Q6GZ02	Mycoplasma_phage	28.2	2.0e-10
AUM22988.1|2890665_2891316_+	DUF1076 domain-containing protein	NA	B6DZZ5	Stx2-converting_phage	37.2	2.8e-25
AUM22989.1|2891390_2892449_+	type III effector	NA	NA	NA	NA	NA
AUM22990.1|2892576_2893212_-	DUF1076 domain-containing protein	NA	B6DZB9	Enterobacteria_phage	92.0	3.7e-75
AUM22991.1|2893279_2893861_-	DUF1076 domain-containing protein	NA	H6WZN1	Escherichia_phage	54.8	2.7e-48
AUM22992.1|2893972_2894242_-|tail	phage tail protein	tail	A0A0P0ZCV7	Stx2-converting_phage	95.5	2.3e-42
AUM25166.1|2895621_2896245_-	hypothetical protein	NA	A0A1U8QHD6	Enterobacteria_phage	61.4	1.3e-69
AUM22993.1|2896313_2899790_-|tail	phage tail protein	tail	Q6H9T2	Enterobacteria_phage	98.2	0.0e+00
AUM22994.1|2900025_2900706_-|tail	phage tail protein	tail	Q9EYE5	Enterobacteria_phage	90.6	1.0e-107
AUM22995.1|2900603_2901347_-|tail	phage tail protein	tail	Q6H9T4	Enterobacteria_phage	98.4	7.3e-147
AUM22996.1|2901357_2902056_-|tail	phage minor tail protein L	tail	B6DZB1	Enterobacteria_phage	96.6	1.7e-129
AUM22997.1|2902055_2902397_-|tail	phage tail protein	tail	A0A0P0ZBQ8	Stx2-converting_phage	97.3	4.7e-61
AUM22998.1|2905677_2905959_-	DUF4035 domain-containing protein	NA	H6WZM0	Escherichia_phage	98.9	2.3e-45
AUM22999.1|2905982_2906357_-|tail	phage tail protein	tail	A0A0N7KZA2	Stx2-converting_phage	99.2	3.0e-64
AUM23000.1|2906362_2907079_-|tail	phage tail protein	tail	A0A0P0ZD29	Stx2-converting_phage	99.6	3.9e-129
AUM23001.1|2907144_2907489_-	DUF3168 domain-containing protein	NA	A0A0P0ZC17	Stx2-converting_phage	100.0	1.4e-57
AUM23002.1|2907485_2907932_-	hypothetical protein	NA	A0A0N7KZI9	Stx2-converting_phage	100.0	5.2e-76
AUM23003.1|2907928_2908279_-|head,tail	head-tail adaptor protein	head,tail	A0A0P0ZB28	Stx2-converting_phage	100.0	1.6e-59
AUM23004.1|2908288_2908615_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A0P0ZBH1	Stx2-converting_phage	100.0	9.2e-54
AUM23005.1|2911140_2911362_-	hypothetical protein	NA	A0A0P0ZD92	Stx2-converting_phage	100.0	5.8e-36
AUM23006.1|2911406_2913344_-|capsid	phage major capsid protein	capsid	A0A0P0ZCT9	Stx2-converting_phage	99.8	0.0e+00
AUM23007.1|2913407_2915069_-|terminase	terminase	terminase	A0A0N7KZG0	Stx2-converting_phage	99.5	0.0e+00
AUM23008.1|2915065_2915629_-|terminase	terminase small subunit	terminase	A0A0P0ZD56	Stx2-converting_phage	100.0	1.1e-89
AUM23009.1|2915919_2916285_-	HNH endonuclease	NA	B6ETE5	Enterobacteria_phage	95.9	4.2e-63
AUM23010.1|2916326_2916512_+	DUF3950 domain-containing protein	NA	H6WZK6	Escherichia_phage	88.5	6.4e-20
AUM23011.1|2916641_2916782_-	hypothetical protein	NA	NA	NA	NA	NA
AUM25167.1|2916923_2917103_-	hypothetical protein	NA	Q9T1L1	Enterobacteria_phage	71.8	8.4e-09
AUM23012.1|2917132_2917600_-|lysis	lysis protein	lysis	Q7AYI6	Enterobacteria_phage	99.4	6.5e-77
AUM23013.1|2917898_2918432_-	lysozyme	NA	Q08J98	Stx2-converting_phage	96.0	6.2e-100
AUM23014.1|2918943_2919735_-	hypothetical protein	NA	Q08JA0	Stx2-converting_phage	85.5	5.7e-33
AUM23015.1|2919738_2919954_-|holin	holin	holin	Q6H9V8	Enterobacteria_phage	98.6	7.7e-33
AUM23016.1|2920235_2922086_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	NA	B6DZ89	Enterobacteria_phage	98.9	0.0e+00
AUM23017.1|2922499_2922766_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23018.1|2922656_2923088_-	tellurite resistance protein	NA	H6WZJ6	Escherichia_phage	96.5	3.6e-66
AUM23019.1|2923266_2923488_-	hypothetical protein	NA	K7PJU3	Enterobacteria_phage	65.2	2.0e-20
AUM23020.1|2923540_2923765_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23021.1|2924144_2925203_-	site-specific DNA-methyltransferase	NA	A0A0N7KZF8	Stx2-converting_phage	91.8	1.6e-192
AUM23022.1|2925353_2925551_-	TrmB family transcriptional regulator	NA	S5MQK8	Escherichia_phage	98.5	4.0e-28
AUM23023.1|2925769_2926453_-	antiterminator	NA	I6PDF8	Cronobacter_phage	48.9	1.2e-55
AUM23024.1|2926449_2926809_-	RusA family crossover junction endodeoxyribonuclease	NA	V5URS4	Shigella_phage	65.8	1.7e-37
AUM23025.1|2926821_2927871_-	DUF968 domain-containing protein	NA	U5P0K4	Shigella_phage	54.9	1.5e-110
AUM23026.1|2927872_2928151_-	hypothetical protein	NA	I6PCV7	Cronobacter_phage	48.4	6.3e-11
AUM25168.1|2928091_2928289_+	hypothetical protein	NA	NA	NA	NA	NA
AUM23027.1|2928266_2928752_-	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA	NA
AUM23028.1|2928770_2928950_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23029.1|2929281_2929626_-	hypothetical protein	NA	A0A2R2Z2X8	Escherichia_phage	92.1	9.7e-54
AUM23030.1|2929629_2929917_-	hypothetical protein	NA	A0A1I9LJM1	Stx_converting_phage	95.8	2.5e-47
AUM23031.1|2929919_2930279_-	hypothetical protein	NA	A0A076GCN9	Escherichia_phage	78.6	1.3e-37
AUM23032.1|2930444_2930627_-	hypothetical protein	NA	A0A2R2Z308	Escherichia_phage	95.0	1.0e-25
AUM23033.1|2930774_2931080_-	DUF4406 domain-containing protein	NA	A0A0U2SAZ1	Escherichia_phage	95.0	1.5e-50
AUM23034.1|2931076_2931394_-	DNA-binding protein	NA	A0A222YXX1	Escherichia_phage	71.6	3.0e-33
AUM23035.1|2931390_2932107_-	DUF1627 domain-containing protein	NA	A0A0U2SAW4	Escherichia_phage	63.4	1.0e-73
AUM23036.1|2932128_2932875_-	DNA replication protein DnaC	NA	A0A088CBP4	Shigella_phage	83.2	8.1e-114
AUM25169.1|2932881_2933850_-	DNA-binding protein	NA	U5P0A0	Shigella_phage	52.7	1.8e-73
AUM23037.1|2933872_2934298_-	Rha family transcriptional regulator	NA	NA	NA	NA	NA
AUM23038.1|2934281_2934563_-	Cro/Cl family transcriptional regulator	NA	K7PHA1	Enterobacteria_phage	72.6	6.5e-24
AUM23039.1|2934663_2935083_+	hypothetical protein	NA	K7PK07	Enterobacteria_phage	65.1	8.8e-25
AUM25170.1|2935348_2935501_+	DUF1391 domain-containing protein	NA	M4QQ57	Salicola_phage	55.3	7.8e-08
AUM23040.1|2935512_2936151_+	hypothetical protein	NA	A0A2R2Z306	Escherichia_phage	41.9	2.5e-07
AUM23041.1|2936151_2936361_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23042.1|2936928_2937117_+	cell division inhibitor	NA	NA	NA	NA	NA
AUM23043.1|2937113_2937302_+	DUF1482 domain-containing protein	NA	NA	NA	NA	NA
AUM23044.1|2937394_2939938_+	exodeoxyribonuclease VIII	NA	V5UQJ3	Shigella_phage	69.8	7.1e-234
AUM23045.1|2939999_2940269_+	excisionase	NA	NA	NA	NA	NA
AUM23046.1|2940237_2941356_+|integrase	integrase	integrase	Q77Z04	Phage_21	44.7	3.5e-84
AUM23047.1|2941432_2941900_-	DUF2335 domain-containing protein	NA	A0A1B0YZW3	Pseudomonas_phage	35.0	4.4e-09
2954530:2954545	attR	AAAAAATATAACGTCG	NA	NA	NA	NA
>prophage 10
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	3028697	3135648	5143533	holin,integrase,terminase,protease,tail,lysis,transposase	Enterobacteria_phage(24.39%)	118	3085906:3085965	3120503:3120567
AUM23135.1|3028697_3029392_-|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM23136.1|3029841_3030255_+	poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD	NA	NA	NA	NA	NA
AUM23137.1|3030304_3031369_-	phosphate starvation protein PhoH	NA	R4II13	Cronobacter_phage	76.7	1.1e-90
AUM23138.1|3031712_3032984_-	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA	NA
AUM23139.1|3032989_3034117_-	iron uptake system protein EfeO	NA	NA	NA	NA	NA
AUM23140.1|3035673_3037182_-	sodium/proline symporter PutP	NA	NA	NA	NA	NA
AUM23141.1|3037540_3038234_+|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM23142.1|3038378_3042341_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AUM23143.1|3042380_3043019_-	transcriptional regulator	NA	NA	NA	NA	NA
AUM23144.1|3043249_3044398_+	pyrimidine monooxygenase RutA	NA	NA	NA	NA	NA
AUM25175.1|3044397_3045090_+	peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB	NA	NA	NA	NA	NA
AUM23145.1|3045101_3045488_+	pyrimidine utilization protein C	NA	NA	NA	NA	NA
AUM23146.1|3045495_3046296_+	pyrimidine utilization protein D	NA	NA	NA	NA	NA
AUM23147.1|3046305_3046896_+	nitroreductase family protein	NA	NA	NA	NA	NA
AUM23148.1|3046906_3047401_+	FMN reductase	NA	Q9KX93	Enterobacteria_phage	96.9	1.1e-50
AUM23149.1|3047421_3048750_+	pyrimidine utilization transport protein G	NA	Q9KX94	Enterobacteria_phage	99.1	2.8e-234
AUM23150.1|3048832_3049006_-	stress-induced protein	NA	Q9KX95	Enterobacteria_phage	96.3	4.9e-06
AUM23151.1|3048938_3049175_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23152.1|3049378_3049975_+	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA	NA
AUM23153.1|3049995_3050223_+	hypothetical protein	NA	NA	NA	NA	NA
AUM23154.1|3050260_3051502_-	bifunctional glucose-1-phosphatase/inositol phosphatase	NA	NA	NA	NA	NA
AUM23155.1|3051792_3053052_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23156.1|3053312_3054233_+	curved DNA-binding protein	NA	A0A1V0SIM1	Klosneuvirus	43.0	4.2e-11
AUM25176.1|3054232_3054538_+	chaperone modulator CbpM	NA	NA	NA	NA	NA
AUM23157.1|3054630_3055230_-	molecular chaperone TorD	NA	NA	NA	NA	NA
AUM23158.1|3055226_3057773_-	trimethylamine-N-oxide reductase TorA	NA	A0A077SK27	Escherichia_phage	29.5	1.2e-71
AUM23159.1|3057772_3058945_-	pentaheme c-type cytochrome TorC	NA	NA	NA	NA	NA
AUM23160.1|3059074_3059767_+	two-component system response regulator TorR	NA	W8CYM9	Bacillus_phage	28.0	4.5e-18
AUM23161.1|3059739_3060768_-	TMAO reductase system periplasmic protein TorT	NA	NA	NA	NA	NA
AUM23162.1|3060850_3063595_+	TMAO reductase system sensor histidine kinase/response regulator TorS	NA	A0A1V0SGX0	Hokovirus	31.9	1.0e-36
AUM23163.1|3063666_3064740_+	electron transporter YccM	NA	NA	NA	NA	NA
AUM23164.1|3064788_3064962_-	protein GnsA	NA	NA	NA	NA	NA
AUM23165.1|3064951_3065182_-	cold-shock protein	NA	NA	NA	NA	NA
AUM23166.1|3065156_3065360_-	cold-shock protein	NA	NA	NA	NA	NA
AUM23167.1|3065356_3066565_-|transposase	IS4 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	100.0	1.8e-235
AUM23168.1|3066693_3066906_-	cold-shock protein CspG	NA	A0A1W6JNX5	Morganella_phage	71.4	7.8e-22
AUM23169.1|3067191_3067404_+	cold-shock protein CspH	NA	NA	NA	NA	NA
AUM23170.1|3067845_3068151_+	threonine-rich inner membrane protein GfcA	NA	NA	NA	NA	NA
AUM23171.1|3068257_3068902_+	YjbF family lipoprotein	NA	NA	NA	NA	NA
AUM23172.1|3068898_3069645_+	hypothetical protein	NA	NA	NA	NA	NA
AUM23173.1|3069644_3071741_+	YjbH domain-containing protein	NA	NA	NA	NA	NA
AUM23174.1|3071786_3072926_+	polysaccharide export protein Wza	NA	NA	NA	NA	NA
AUM23175.1|3072913_3073360_+	protein-tyrosine-phosphatase	NA	NA	NA	NA	NA
AUM23176.1|3073379_3075560_+	tyrosine-protein kinase etk	NA	NA	NA	NA	NA
AUM25177.1|3075674_3076973_-	phytase AppA	NA	NA	NA	NA	NA
AUM23177.1|3077052_3077145_-	cytochrome bd-II oxidase subunit CbdX	NA	NA	NA	NA	NA
AUM23178.1|3077157_3078294_-	cytochrome bd-II ubiquinol oxidase subunit 2	NA	NA	NA	NA	NA
AUM23179.1|3078305_3079850_-	cytochrome d terminal oxidase subunit 1	NA	NA	NA	NA	NA
AUM23180.1|3079983_3080841_-	hydrogenase expression/formation protein	NA	NA	NA	NA	NA
AUM23181.1|3080837_3081236_-	hydrogenase-1 operon protein HyaE	NA	NA	NA	NA	NA
AUM23182.1|3081232_3081820_-	HyaD/HybD family hydrogenase maturation endopeptidase	NA	NA	NA	NA	NA
AUM23183.1|3081816_3082524_-	Ni/Fe-hydrogenase, b-type cytochrome subunit	NA	NA	NA	NA	NA
AUM23184.1|3082542_3084336_-	hydrogenase 2 large subunit	NA	NA	NA	NA	NA
AUM23185.1|3084332_3085451_-	hydrogenase-1 small chain	NA	NA	NA	NA	NA
3085906:3085965	attL	CGGTCTTGAAAACCGGCGACCCGAAAGGGTTCCAGAGTTCGAATCTCTGCGCTTCCGCCA	NA	NA	NA	NA
AUM23186.1|3086046_3086199_-|tail	phage tail protein	tail	K7PMH7	Enterobacteria_phage	84.4	4.3e-14
AUM23187.1|3086575_3087937_+	type III secretion protein GogB	NA	Q9MBM1	Phage_Gifsy-1	40.2	1.5e-49
AUM23188.1|3087999_3088275_+	secretion protein EspO	NA	NA	NA	NA	NA
AUM23189.1|3088391_3088661_-|tail	phage tail protein	tail	Q687E5	Enterobacteria_phage	96.6	1.2e-43
AUM23190.1|3088698_3090270_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	58.5	3.8e-169
AUM23191.1|3090289_3090637_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	76.6	2.6e-46
AUM23192.1|3090636_3091314_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZCV4	Stx2-converting_phage	46.0	3.3e-21
AUM23193.1|3091275_3091419_+	copper resistance protein	NA	NA	NA	NA	NA
AUM23194.1|3091369_3092683_-|tail	phage tail protein	tail	H6WZM9	Escherichia_phage	98.4	9.7e-78
AUM23195.1|3092747_3093347_-	Ail/Lom family protein	NA	Q687E7	Enterobacteria_phage	99.5	1.4e-111
AUM23196.1|3093413_3095180_-|tail	phage tail protein	tail	A0A0P0ZCI5	Stx2-converting_phage	98.3	0.0e+00
AUM23197.1|3095911_3097108_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AUM23198.1|3097370_3097880_-|terminase	terminase	terminase	A0A1I9KFT4	Aeromonas_phage	32.7	1.6e-12
AUM23199.1|3098282_3098507_+	DUF3950 domain-containing protein	NA	A0A0K2FIR8	Escherichia_phage	92.5	2.7e-20
AUM23200.1|3098588_3098903_-	PerC family transcriptional regulator	NA	NA	NA	NA	NA
AUM23201.1|3099145_3099286_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23202.1|3099368_3099836_-|lysis	lysis protein	lysis	Q7AYI6	Enterobacteria_phage	93.5	2.2e-72
AUM23203.1|3099837_3099951_-	hypothetical protein	NA	A0A2L1IV24	Escherichia_phage	100.0	6.6e-12
AUM23204.1|3100171_3100705_-	lysozyme	NA	A0A1U9AJ98	Stx1_converting_phage	94.4	3.1e-99
AUM23205.1|3100749_3100932_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23206.1|3100900_3101137_+	hypothetical protein	NA	NA	NA	NA	NA
AUM23207.1|3101085_3101430_+	hypothetical protein	NA	NA	NA	NA	NA
AUM23208.1|3101392_3101608_-|holin	holin	holin	Q6H9V8	Enterobacteria_phage	97.2	1.7e-32
AUM25178.1|3103266_3104491_+|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	98.7	1.1e-176
AUM23209.1|3105475_3106689_-|transposase	IS3 family transposase	transposase	Q6H9S6	Enterobacteria_phage	99.7	3.4e-170
AUM23210.1|3107081_3107855_-	iroE	NA	NA	NA	NA	NA
AUM23211.1|3108402_3108615_+	Hok/Gef family protein	NA	A0A0U2QV81	Escherichia_phage	95.4	1.5e-25
AUM23212.1|3108782_3109061_+	hypothetical protein	NA	I6PCV7	Cronobacter_phage	48.4	5.7e-12
AUM23213.1|3109062_3110112_+	DUF968 domain-containing protein	NA	U5P0K4	Shigella_phage	54.9	3.4e-110
AUM23214.1|3110124_3110496_+	hypothetical protein	NA	V5URS4	Shigella_phage	63.7	1.3e-35
AUM23215.1|3110485_3110857_+	antitermination protein	NA	Q777W5	Enterobacteria_phage	84.0	1.0e-53
AUM23216.1|3111008_3111827_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AUM23217.1|3112113_3112311_+	TrmB family transcriptional regulator	NA	S5MQK8	Escherichia_phage	96.9	2.6e-27
AUM23218.1|3112936_3113209_-	hypothetical protein	NA	A0A0U2S629	Escherichia_phage	45.8	1.1e-12
AUM23219.1|3113317_3113719_+	XRE family transcriptional regulator	NA	A0A1B5FPF4	Escherichia_phage	54.5	7.4e-13
AUM23220.1|3113746_3113938_+	antitoxin	NA	NA	NA	NA	NA
AUM23221.1|3113937_3114225_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
AUM23222.1|3114501_3114657_+	DUF1391 domain-containing protein	NA	M4QQ57	Salicola_phage	53.2	3.0e-07
AUM23223.1|3114658_3114787_+	hypothetical protein	NA	NA	NA	NA	NA
AUM23224.1|3114798_3115188_+	hypothetical protein	NA	A0A2R2Z306	Escherichia_phage	30.0	1.5e-05
AUM23225.1|3115374_3115560_-	hypothetical protein	NA	NA	NA	NA	NA
AUM25179.1|3115561_3115867_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23226.1|3116133_3116322_+	cell division inhibition protein DicB	NA	NA	NA	NA	NA
AUM23227.1|3116318_3116510_+	DUF1482 domain-containing protein	NA	NA	NA	NA	NA
AUM23228.1|3116603_3119054_+	exonuclease	NA	A0A192Y6E0	Salmonella_phage	58.6	1.1e-58
AUM23229.1|3119121_3119364_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AUM23230.1|3119341_3120361_+|integrase	integrase	integrase	A0A192Y7M7	Salmonella_phage	49.7	1.3e-85
AUM23231.1|3120768_3121428_+	BAX inhibitor protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	48.5	6.2e-41
3120503:3120567	attR	CGGTCTTGAAAACCGGCGACCCGAAAGGGTTCCAGAGTTCGAATCTCTGCGCTTCCGCCAAATAA	NA	NA	NA	NA
AUM23232.1|3121518_3121848_+	sulfurtransferase TusE	NA	NA	NA	NA	NA
AUM23233.1|3121844_3122123_-	acylphosphatase	NA	NA	NA	NA	NA
AUM23234.1|3122217_3123408_+	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
AUM23235.1|3123465_3123783_+	heat-shock protein HspQ	NA	NA	NA	NA	NA
AUM23236.1|3123827_3124241_-	CoA-binding protein	NA	NA	NA	NA	NA
AUM23237.1|3124413_3125076_+	hypothetical protein	NA	NA	NA	NA	NA
AUM23238.1|3125171_3125630_+	methylglyoxal synthase	NA	NA	NA	NA	NA
AUM23239.1|3125661_3127716_-	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.9	5.9e-21
AUM23240.1|3127838_3128285_+	YccF domain-containing protein	NA	NA	NA	NA	NA
AUM25180.1|3128303_3130457_+	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
AUM23241.1|3130419_3131049_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
AUM23242.1|3131267_3131777_+	cell division inhibitor SulA	NA	NA	NA	NA	NA
AUM23243.1|3131760_3131979_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23244.1|3132133_3133174_+	porin OmpA	NA	NA	NA	NA	NA
AUM23245.1|3133249_3133702_-	macrodomain Ter protein	NA	NA	NA	NA	NA
AUM23246.1|3133887_3135648_+|protease	Lon protease family protein	protease	NA	NA	NA	NA
>prophage 11
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	3445647	3457363	5143533	tail,holin,transposase,integrase	Enterobacteria_phage(43.75%)	17	3443884:3443898	3457437:3457451
3443884:3443898	attL	TTAGTATAAAAAAGC	NA	NA	NA	NA
AUM25195.1|3445647_3445893_-|tail	phage tail protein	tail	Q687E6	Enterobacteria_phage	98.5	2.4e-30
AUM23517.1|3446117_3446333_-|holin	holin	holin	A0A0P0ZC45	Stx2-converting_phage	100.0	2.0e-33
AUM23518.1|3447199_3447916_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23519.1|3448195_3448819_-	antitermination protein	NA	K7PM87	Enterobacteria_phage	98.1	2.2e-112
AUM23520.1|3448815_3449481_-	serine/threonine protein phosphatase	NA	Q5TJL8	Enterobacteria_phage	98.6	7.2e-130
AUM23521.1|3449633_3449816_+	recombinase	NA	A0A1I9LJN0	Stx_converting_phage	98.3	7.2e-24
AUM23522.1|3449812_3450493_+	exonuclease	NA	B6DZ61	Enterobacteria_phage	97.3	5.6e-130
AUM23523.1|3450489_3450651_+	DUF1317 domain-containing protein	NA	A0A0N7CHV0	Escherichia_phage	96.0	7.7e-22
AUM23524.1|3450643_3451201_+	phage N-6-adenine-methyltransferase	NA	E5AGF8	Erwinia_phage	62.3	2.0e-61
AUM23525.1|3451211_3451493_+	cell division protein ZapA	NA	A0A0P0ZE02	Stx2-converting_phage	98.9	5.5e-47
AUM23526.1|3451591_3451849_+	conjugal transfer protein TraR	NA	A0A1I9LJM6	Stx_converting_phage	97.1	2.0e-32
AUM23527.1|3451854_3453067_+|transposase	IS3 family transposase	transposase	Q6H9S6	Enterobacteria_phage	98.6	2.5e-168
AUM23528.1|3453522_3453891_-	hypothetical protein	NA	Q716C1	Shigella_phage	97.7	2.5e-39
AUM23529.1|3454034_3454643_+	eae-like domain protein	NA	Q9MCR3	Enterobacteria_phage	96.4	5.0e-21
AUM23530.1|3454773_3455472_+	DUF1311 domain-containing protein	NA	J9Q6K3	Salmonella_phage	81.9	1.5e-101
AUM23531.1|3455696_3456008_+	hypothetical protein	NA	A0A1I9LJL8	Stx_converting_phage	100.0	2.1e-55
AUM23532.1|3456292_3457363_+|integrase	integrase	integrase	Q9MCR4	Enterobacteria_phage	100.0	5.1e-202
3457437:3457451	attR	TTAGTATAAAAAAGC	NA	NA	NA	NA
>prophage 12
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	3905655	3943160	5143533	transposase,integrase	Stx2-converting_phage(30.77%)	44	3908932:3908945	3915584:3915597
AUM23928.1|3905655_3906350_-|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM23929.1|3906861_3907497_+	fimbrial protein	NA	NA	NA	NA	NA
AUM23930.1|3907554_3908223_+	fimbrial chaperone EcpB	NA	NA	NA	NA	NA
AUM23931.1|3908560_3908776_+	excinuclease ABC subunit B	NA	NA	NA	NA	NA
3908932:3908945	attL	TCCAGTTGTTTCAT	NA	NA	NA	NA
AUM23932.1|3908941_3910156_-|integrase	integrase	integrase	Q7M297	Enterobacteria_phage	56.5	9.7e-133
AUM23933.1|3910532_3911852_+|integrase	integrase	integrase	A0A2H4J5F8	uncultured_Caudovirales_phage	23.4	5.6e-17
AUM23934.1|3911944_3912793_-	DUF4942 domain-containing protein	NA	NA	NA	NA	NA
AUM23935.1|3913075_3914095_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AUM23936.1|3914308_3914506_-	DUF957 domain-containing protein	NA	NA	NA	NA	NA
AUM23937.1|3914517_3915006_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23938.1|3915002_3915380_-	toxin	NA	NA	NA	NA	NA
AUM25219.1|3915426_3915804_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA	NA
3915584:3915597	attR	TCCAGTTGTTTCAT	NA	NA	NA	NA
AUM23939.1|3915878_3916100_-	DUF987 domain-containing protein	NA	A0A142F0X9	Klebsiella_phage	45.8	1.9e-10
AUM25218.1|3916186_3916633_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23940.1|3916678_3917158_-	antirestriction protein	NA	A0A2D0W9W4	Bordetella_phage	33.6	1.2e-12
AUM23941.1|3917251_3917497_-	antirestriction protein	NA	NA	NA	NA	NA
AUM23942.1|3917496_3918315_-	DUF945 domain-containing protein	NA	A0A2C9CX26	Yersinia_phage	38.2	2.0e-44
AUM23943.1|3918535_3918946_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23944.1|3918961_3919645_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23945.1|3919778_3920849_-	phospholipase	NA	NA	NA	NA	NA
AUM23946.1|3920845_3921751_-	chemotaxis protein	NA	NA	NA	NA	NA
AUM23947.1|3921747_3924132_-	dGTPase	NA	NA	NA	NA	NA
AUM23948.1|3925517_3926105_+	hypothetical protein	NA	NA	NA	NA	NA
AUM23949.1|3926436_3927063_+	hypothetical protein	NA	NA	NA	NA	NA
AUM23950.1|3927519_3927945_+	IS66 family insertion sequence hypothetical protein	NA	Q6H9S5	Enterobacteria_phage	97.9	1.3e-47
AUM23951.1|3927941_3928292_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	66.4	6.2e-40
AUM25220.1|3929702_3930083_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBP6	Stx2-converting_phage	100.0	1.4e-66
AUM23952.1|3930079_3930427_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	100.0	2.2e-61
AUM23953.1|3930476_3932015_+|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	99.2	2.7e-297
AUM23954.1|3932520_3932748_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23955.1|3932782_3933286_-	immunity protein CdiI-o11	NA	NA	NA	NA	NA
AUM23956.1|3933285_3934419_-	deoxyribonuclease CdiA-o11	NA	NA	NA	NA	NA
AUM23957.1|3934453_3934975_-	DUF2569 domain-containing protein	NA	NA	NA	NA	NA
AUM23958.1|3935238_3935514_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23959.1|3935482_3936091_-	adhesin	NA	NA	NA	NA	NA
AUM23960.1|3936321_3936576_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23961.1|3936565_3936814_-	hemagglutinin	NA	NA	NA	NA	NA
AUM23962.1|3937361_3938198_+	cation transporter	NA	S5VL66	Leptospira_phage	24.0	5.7e-15
AUM23963.1|3938438_3939254_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA	NA
AUM23964.1|3939340_3939643_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AUM23965.1|3939536_3939788_-	hypothetical protein	NA	NA	NA	NA	NA
AUM23966.1|3940026_3940863_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA	NA
AUM23967.1|3940862_3941666_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	Q75ZG1	Hepacivirus	34.3	4.9e-24
AUM23968.1|3941951_3943160_+|transposase	IS4 family transposase	transposase	Q9E8P4	Bluetongue_virus	99.8	2.0e-234
>prophage 13
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	4008537	4084314	5143533	tRNA,plate,transposase,protease	uncultured_Caudovirales_phage(12.5%)	58	NA	NA
AUM24026.1|4008537_4009231_+|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM24027.1|4009489_4010290_+	EEP domain-containing protein	NA	NA	NA	NA	NA
AUM24028.1|4010293_4010917_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AUM24029.1|4010965_4012324_-	murein transglycosylase D	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	36.0	1.3e-08
AUM24030.1|4012395_4013151_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AUM24031.1|4013184_4013907_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AUM24032.1|4013903_4014371_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	58.7	1.0e-50
AUM25223.1|4014435_4015167_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	39.0	3.4e-40
AUM24033.1|4015705_4016491_+	hypothetical protein	NA	NA	NA	NA	NA
AUM24034.1|4016627_4017107_-	hypothetical protein	NA	NA	NA	NA	NA
AUM24035.1|4017116_4018031_-	hypothetical protein	NA	NA	NA	NA	NA
AUM24036.1|4018074_4018557_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
AUM24037.1|4019943_4023408_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
AUM24038.1|4023486_4024965_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
AUM24039.1|4024903_4025647_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
AUM24040.1|4028674_4030525_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AUM24041.1|4030528_4030942_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AUM24042.1|4030948_4032424_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AUM24043.1|4032474_4032699_-	hypothetical protein	NA	NA	NA	NA	NA
AUM24044.1|4032733_4033234_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AUM24045.1|4036380_4037075_-|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM24046.1|4042831_4043407_-	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
AUM24047.1|4043594_4044626_+	D-methionine ABC transporter, ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.2	1.2e-35
AUM24048.1|4044618_4045272_+	methionine ABC transporter	NA	NA	NA	NA	NA
AUM24049.1|4045311_4046127_+	methionine ABC transporter substrate-binding protein MetQ	NA	NA	NA	NA	NA
AUM24050.1|4046244_4046649_+	Rcs stress response system protein RcsF	NA	NA	NA	NA	NA
AUM24051.1|4046645_4047353_+|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
AUM24052.1|4047463_4049182_+|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
AUM24053.1|4050212_4050923_-	copper homeostasis/adhesion lipoprotein NlpE	NA	NA	NA	NA	NA
AUM24054.1|4050936_4051359_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AUM24055.1|4051786_4051987_+	hypothetical protein	NA	NA	NA	NA	NA
AUM25224.1|4051979_4052234_+	protein rof	NA	NA	NA	NA	NA
AUM24056.1|4052282_4053581_-|tRNA	tRNA(Ile)-lysidine synthetase	tRNA	NA	NA	NA	NA
AUM24057.1|4053645_4054035_-	VOC family protein	NA	NA	NA	NA	NA
AUM24058.1|4054091_4056233_-	lysine decarboxylase constitutive	NA	NA	NA	NA	NA
AUM24059.1|4056331_4057291_-	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA	NA
AUM24060.1|4057303_4060786_-	DNA polymerase III subunit alpha	NA	Q8W6C3	Saccharomonospora_phage	36.9	1.1e-208
AUM24061.1|4060822_4061419_-	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	40.0	3.9e-26
AUM24062.1|4061415_4062564_-	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AUM24063.1|4062563_4063352_-	acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AUM24064.1|4063355_4063811_-	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AUM24065.1|4063915_4064941_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AUM24066.1|4064944_4065430_-	chaperone protein Skp	NA	NA	NA	NA	NA
AUM24067.1|4065551_4067984_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
AUM24068.1|4068013_4069366_-|protease	zinc metalloprotease RseP	protease	NA	NA	NA	NA
AUM24069.1|4069377_4070235_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
AUM24070.1|4070247_4071006_-	(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase	NA	R9W0U9	Flavobacterium_phage	44.4	7.7e-27
AUM24071.1|4071194_4072391_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
AUM24072.1|4072482_4073040_-	ribosome-recycling factor	NA	NA	NA	NA	NA
AUM24073.1|4073331_4074057_-	UMP kinase	NA	NA	NA	NA	NA
AUM24074.1|4074203_4075055_-	elongation factor Ts	NA	NA	NA	NA	NA
AUM24075.1|4075311_4076037_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
AUM24076.1|4076404_4077199_+	methionine aminopeptidase	NA	NA	NA	NA	NA
AUM24077.1|4077260_4079933_+	bifunctional uridylyltransferase/uridylyl-removing protein GlnD	NA	NA	NA	NA	NA
AUM24078.1|4079963_4080788_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
AUM24079.1|4081102_4081489_+	hypothetical protein	NA	NA	NA	NA	NA
AUM24080.1|4081577_4082735_-	carbohydrate diacid regulon transcriptional regulator CdaR	NA	NA	NA	NA	NA
AUM24081.1|4082889_4084314_-|protease	periplasmic serine endoprotease DegP	protease	A0A1B1IT49	uncultured_Mediterranean_phage	28.8	1.9e-26
>prophage 14
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	4265292	4347822	5143533	holin,integrase,head,tRNA,terminase,tail,lysis,capsid,transposase	Escherichia_phage(35.82%)	95	4325920:4325979	4354086:4354852
AUM24234.1|4265292_4265979_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
AUM24235.1|4266378_4266519_-	hypothetical protein	NA	NA	NA	NA	NA
AUM24236.1|4266614_4267331_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AUM24237.1|4267390_4268743_-	cell envelope integrity protein CreD	NA	NA	NA	NA	NA
AUM24238.1|4268800_4270225_-	two-component system sensor histidine kinase CreC	NA	Q8QKV7	Ectocarpus_siliculosus_virus	20.4	3.6e-09
AUM24239.1|4270224_4270914_-	two-component system response regulator CreB	NA	W8CYM9	Bacillus_phage	35.3	8.8e-30
AUM24240.1|4270926_4271400_-	protein CreA	NA	NA	NA	NA	NA
AUM24241.1|4271610_4272480_+	right origin-binding protein	NA	NA	NA	NA	NA
AUM24242.1|4272476_4273124_-	phosphoglycerate mutase	NA	NA	NA	NA	NA
AUM25233.1|4273175_4273688_+	non-canonical purine NTP phosphatase	NA	NA	NA	NA	NA
AUM24243.1|4273834_4274161_-	Trp operon repressor	NA	NA	NA	NA	NA
AUM24244.1|4274250_4276188_-	murein transglycosylase	NA	A0A1P8CWQ1	Bacillus_phage	35.7	2.3e-11
AUM25234.1|4276296_4276425_-	methionine aminopeptidase	NA	NA	NA	NA	NA
AUM24245.1|4276398_4278066_+	energy-dependent translational throttle protein EttA	NA	A0A1V0SKJ1	Klosneuvirus	26.4	3.7e-42
AUM24246.1|4278372_4279605_-	trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR	NA	A0A0C5K935	Enterococcus_phage	42.6	2.1e-82
AUM24247.1|4279625_4281008_-	DNA repair protein RadA	NA	NA	NA	NA	NA
AUM24248.1|4281056_4282025_-	phosphoserine phosphatase	NA	NA	NA	NA	NA
AUM24249.1|4282130_4282775_+	hypothetical protein	NA	NA	NA	NA	NA
AUM24250.1|4282802_4283819_+	lipoate-protein ligase LplA	NA	NA	NA	NA	NA
AUM24251.1|4283819_4285151_-	transcriptional regulator	NA	NA	NA	NA	NA
AUM24252.1|4285317_4286037_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
AUM24253.1|4286093_4287317_-	phosphopentomutase	NA	NA	NA	NA	NA
AUM24254.1|4287368_4288691_-	thymidine phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	39.8	6.8e-79
AUM24255.1|4288857_4289637_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
AUM24256.1|4289895_4291446_+	YjjI family glycine radical enzyme	NA	NA	NA	NA	NA
AUM24257.1|4291417_4291570_+	hypothetical protein	NA	NA	NA	NA	NA
AUM24258.1|4291576_4292281_+	YjjW family glycine radical enzyme activase	NA	NA	NA	NA	NA
AUM24259.1|4292393_4293176_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
AUM24260.1|4293172_4294246_-	patatin family protein	NA	NA	NA	NA	NA
AUM24261.1|4294367_4294547_-	DUF1328 domain-containing protein	NA	A0A0N7CBR2	Salmonella_phage	64.2	2.0e-10
AUM24262.1|4294655_4295261_-	molecular chaperone OsmY	NA	NA	NA	NA	NA
AUM24263.1|4295653_4297240_-	peptide chain release factor 3	NA	D0R0F5	Streptococcus_phage	24.9	5.3e-30
AUM24264.1|4297459_4297708_+	damage-inducible protein DinI	NA	A5LH55	Enterobacteria_phage	100.0	1.1e-38
AUM24265.1|4298076_4298346_-|tail	phage tail protein	tail	H6WZN0	Escherichia_phage	100.0	3.8e-45
AUM24266.1|4298347_4299661_-|tail	phage tail protein	tail	A0A0P0ZCC1	Stx2-converting_phage	98.2	3.2e-81
AUM24267.1|4299725_4300325_-	Ail/Lom family protein	NA	A0A0P0ZCF6	Stx2-converting_phage	97.0	5.9e-107
AUM24268.1|4300391_4303871_-|tail	phage tail protein	tail	B6DZB5	Enterobacteria_phage	96.5	0.0e+00
AUM24269.1|4304106_4304787_-|tail	phage tail protein	tail	Q9EYE5	Enterobacteria_phage	94.6	7.9e-116
AUM24270.1|4304684_4305428_-|tail	phage tail protein	tail	Q6H9T4	Enterobacteria_phage	96.3	9.8e-144
AUM24271.1|4305438_4306137_-|tail	phage minor tail protein L	tail	H6WZM3	Escherichia_phage	98.7	3.1e-131
AUM24272.1|4306136_4306478_-|tail	phage tail protein	tail	A0A0P0ZCS8	Stx2-converting_phage	100.0	8.7e-63
AUM24273.1|4309759_4310041_-	DUF4035 domain-containing protein	NA	H6WZM0	Escherichia_phage	100.0	7.9e-46
AUM24274.1|4310064_4310439_-|tail	phage tail protein	tail	A0A0N7KZA2	Stx2-converting_phage	100.0	7.8e-65
AUM24275.1|4310444_4311161_-|tail	phage tail protein	tail	A0A0P0ZD29	Stx2-converting_phage	97.5	4.0e-126
AUM24276.1|4311226_4311571_-	DUF3168 domain-containing protein	NA	A0A0P0ZC17	Stx2-converting_phage	100.0	1.4e-57
AUM24277.1|4311567_4312014_-	hypothetical protein	NA	A0A0N7KZI9	Stx2-converting_phage	100.0	5.2e-76
AUM24278.1|4312369_4312696_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A0P0ZDE0	Stx2-converting_phage	100.0	5.4e-54
AUM24279.1|4315221_4315443_-	hypothetical protein	NA	A0A0P0ZD92	Stx2-converting_phage	100.0	5.8e-36
AUM24280.1|4315487_4317425_-|capsid	phage major capsid protein	capsid	A0A0P0ZCT9	Stx2-converting_phage	99.5	0.0e+00
AUM24281.1|4317488_4319150_-|terminase	terminase	terminase	A0A0N7KZG0	Stx2-converting_phage	99.5	0.0e+00
AUM24282.1|4319146_4319710_-|terminase	terminase small subunit	terminase	A0A0P0ZDD1	Stx2-converting_phage	100.0	4.7e-90
AUM24283.1|4320000_4320366_-	HNH endonuclease	NA	B6ETE5	Enterobacteria_phage	95.9	4.2e-63
AUM24284.1|4320407_4320635_+	DUF3950 domain-containing protein	NA	A0A0P0ZE23	Stx2-converting_phage	100.0	1.7e-35
AUM24285.1|4320886_4321021_+	hypothetical protein	NA	NA	NA	NA	NA
AUM24286.1|4321097_4321355_-	hypothetical protein	NA	A0A0P0ZBT1	Stx2-converting_phage	100.0	5.0e-39
AUM24287.1|4321351_4321849_-	DNA-binding protein	NA	A0A0P0ZBU2	Stx2-converting_phage	100.0	3.6e-94
AUM24288.1|4322051_4322489_-|lysis	lysis protein	lysis	A0A0P0ZBQ9	Stx2-converting_phage	96.6	4.2e-70
AUM24289.1|4322485_4322983_-	lysozyme	NA	A0A0N7KZA0	Stx2-converting_phage	97.0	2.4e-90
AUM24290.1|4322982_4323198_-|holin	holin	holin	A0A0P0ZC45	Stx2-converting_phage	100.0	2.0e-33
AUM24291.1|4323274_4323547_-	DUF826 domain-containing protein	NA	A0A0P0ZBB8	Stx2-converting_phage	100.0	2.2e-21
AUM24292.1|4323587_4323767_-	DUF1378 domain-containing protein	NA	A0A2R2Z345	Escherichia_phage	100.0	2.2e-25
AUM24293.1|4323903_4325841_-	sialate O-acetylesterase	NA	A0A0P0ZBP4	Stx2-converting_phage	99.1	0.0e+00
4325920:4325979	attL	GGTGATGCCTCTAATTAGTTGAATCTGATGTATAATACGGGCTTTTGAGGTTATCTCATG	NA	NA	NA	NA
AUM24294.1|4325976_4326670_+|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM24295.1|4326858_4327182_+	anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	100.0	6.9e-62
AUM24296.1|4327478_4327748_-	Shiga toxin subunit B	NA	Q5TJL5	Enterobacteria_phage	100.0	2.1e-43
AUM24297.1|4327759_4328719_-	Shiga toxin Stx2 subunit A	NA	Q5TJL6	Enterobacteria_phage	99.7	9.6e-176
AUM24298.1|4329107_4329260_-	DNA methylase	NA	A0A2R2Z327	Escherichia_phage	100.0	4.0e-20
AUM24299.1|4329274_4329520_+	hypothetical protein	NA	A0A0P0ZGS0	Escherichia_phage	100.0	5.0e-36
AUM24300.1|4329508_4329943_-	antitermination protein	NA	A0A0P0ZGJ3	Escherichia_phage	100.0	4.8e-82
AUM24301.1|4329935_4330130_-	protein ninH	NA	A0A0P0ZGE1	Escherichia_phage	98.4	1.4e-30
AUM24302.1|4330126_4330690_-	recombination protein NinG	NA	A0A0P0ZG59	Escherichia_phage	100.0	8.9e-105
AUM24303.1|4330697_4331147_-	DUF1367 domain-containing protein	NA	A0A0P0ZFW0	Escherichia_phage	100.0	7.6e-83
AUM24304.1|4331146_4332118_-	DNA primase	NA	A0A0H4IPK0	Shigella_phage	100.0	1.9e-195
AUM24305.1|4332107_4333628_-	ATP-dependent helicase	NA	A0A2R2Z335	Escherichia_phage	99.8	8.3e-307
AUM24306.1|4333621_4333999_-	hypothetical protein	NA	A0A2R2Z329	Escherichia_phage	98.4	7.6e-60
AUM24307.1|4334165_4334360_-	hypothetical protein	NA	NA	NA	NA	NA
AUM24308.1|4334530_4334734_-	Cro/Cl family transcriptional regulator	NA	A0A2R2Z333	Escherichia_phage	98.5	9.8e-30
AUM24309.1|4334829_4335543_+	LexA family transcriptional repressor	NA	A0A2R2X2B0	Escherichia_phage	100.0	6.3e-132
AUM24310.1|4335637_4337107_+	SAM-dependent methyltransferase	NA	A0A2L1IV91	Escherichia_phage	99.6	1.9e-284
AUM24311.1|4337103_4338057_+	restriction endonuclease	NA	A0A0P0ZG22	Escherichia_phage	100.0	7.0e-187
AUM24312.1|4338560_4339460_+	hypothetical protein	NA	A0A0P0ZG86	Escherichia_phage	95.8	3.9e-139
AUM24313.1|4339530_4339743_+	cell division inhibitor protein	NA	A0A0P0ZGD1	Escherichia_phage	100.0	5.8e-33
AUM24314.1|4339754_4340036_+	AbrB family transcriptional regulator	NA	A0A0P0ZGC3	Escherichia_phage	100.0	3.0e-45
AUM24315.1|4340056_4340338_+	hypothetical protein	NA	A0A0P0ZFG3	Escherichia_phage	100.0	1.1e-47
AUM24316.1|4340354_4341305_+	recombinase RecT	NA	A0A0P0ZFY9	Escherichia_phage	96.8	2.0e-173
AUM24317.1|4341301_4341982_+	exonuclease	NA	A0A0P0ZFI7	Escherichia_phage	98.2	1.9e-130
AUM25235.1|4341978_4342155_+	DUF1317 domain-containing protein	NA	A0A0P0ZAS9	Stx2-converting_phage	100.0	1.3e-22
AUM24318.1|4342132_4342324_+	hypothetical protein	NA	A0A0P0ZC67	Stx2-converting_phage	100.0	7.3e-27
AUM24319.1|4342334_4342616_+	cell division protein ZapA	NA	Q6H9Z3	Enterobacteria_phage	100.0	3.2e-47
AUM24320.1|4342714_4342936_+	conjugal transfer protein TraR	NA	A0A1I9LJM6	Stx_converting_phage	100.0	2.9e-35
AUM24321.1|4342932_4343619_+	hypothetical protein	NA	H6WZG2	Escherichia_phage	87.1	3.7e-121
AUM25236.1|4344121_4344454_+	hypothetical protein	NA	A5LH60	Enterobacteria_phage	100.0	1.5e-43
AUM24322.1|4344453_4344648_+	DNA-binding protein	NA	A5LH59	Enterobacteria_phage	98.4	5.8e-32
AUM25237.1|4345521_4346427_+	hypothetical protein	NA	NA	NA	NA	NA
AUM24323.1|4346598_4347822_-|integrase	integrase	integrase	A0A291AWU1	Escherichia_phage	98.0	1.3e-233
4354086:4354852	attR	GGTGATGCCTCTAATTAGTTGAATCTGATGTATAATACGGGCTTTTGAGGTTATCTCATGGCCAGCGTTAATATTCATTGTCCCCGTTGTCAGTCAGCTCAGGTTTACCGCCATGGTCAGAACCCTAAAGGCCGTGACAGATTTCGCTGCCGTGACTGCCACCGTGTGTTTCAGCTCACTTATACTTATCAAGCACGTAAGCCGGGTATGAAAGAGCTGATAACTGAAATGGCCTTTAATGGTGCCGGGGTTCGCGATACCGCCAGGACACTGAAAATTGGTATTAACACCGTCATCCGGACTTTAAAAAACTCGCGCCAAAGCGAATAACGTCTTCGCCTGTTGCCCATGCTGATGTGGCGCTTATCTGCGAGCTTGATGAGCAATGGAGCTACGTTGGCAGTAAAGCCCGGCAACACTGGCTCTGGTACGCGTACAACACCAAAACAGGCGGTGTACTGGCCTACACTTTTGGTCCCCGAACCGATCAAACGTGCCGGGAGCTACTGGCACTGCTTACACCCTTCAACATCGGCATGCTGACCAGCGATGACTGGGGCAGCTATGGCCGGGAGGTGCCGAAGAATAAGCATCTGACCGGCAAAATATTCACCCAACGCATTGAGCGTAATAATCTGACGCTACGCACCCGCATTAAGCGGTTGGCTCGTAAAACAATCTGCTTCTCACGCTCAGTTGAGATCCACGAAAAAGTGATCGGAGCGTTTATCGAAAAACACATGTTCTACTAATTGGATGCACTACCA	NA	NA	NA	NA
>prophage 15
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	4506527	4560464	5143533	tRNA,protease,transposase	Vibrio_phage(15.38%)	48	NA	NA
AUM24466.1|4506527_4507679_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.6	2.0e-42
AUM24467.1|4507635_4507998_-	hypothetical protein	NA	NA	NA	NA	NA
AUM24468.1|4508016_4508418_-	DUF2170 domain-containing protein	NA	NA	NA	NA	NA
AUM24469.1|4508545_4509277_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
AUM24470.1|4509457_4511899_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	33.1	2.9e-67
AUM24471.1|4511937_4512363_-	transcriptional regulator	NA	NA	NA	NA	NA
AUM24472.1|4512567_4513866_-	adenylosuccinate synthetase	NA	W5S5V7	Pithovirus	35.9	2.2e-66
AUM24473.1|4513969_4514167_-	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
AUM24474.1|4514248_4515253_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
AUM24475.1|4515255_4516515_-|protease	protease modulator HflK	protease	A0A1L2CVV0	Pectobacterium_phage	25.5	3.6e-05
AUM24476.1|4516600_4517881_-	GTPase HflX	NA	NA	NA	NA	NA
AUM24477.1|4517957_4518266_-	RNA-binding protein Hfq	NA	NA	NA	NA	NA
AUM24478.1|4518351_4519302_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AUM24479.1|4519294_4521142_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	41.3	3.4e-60
AUM24480.1|4521151_4522486_-	N-acetylmuramoyl-L-alanine amidase AmiB	NA	A0A067ZJB6	Vibrio_phage	31.0	8.8e-18
AUM24481.1|4522504_4522966_-|tRNA	tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE	tRNA	NA	NA	NA	NA
AUM24482.1|4522937_4524485_-	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
AUM24483.1|4524483_4525623_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
AUM24484.1|4526523_4527069_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	40.4	2.2e-28
AUM24485.1|4527163_4528216_+	ribosome small subunit-dependent GTPase	NA	NA	NA	NA	NA
AUM24486.1|4528312_4529281_+	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
AUM24487.1|4529302_4532626_+	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA	NA
AUM24488.1|4533564_4534258_+|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM24489.1|4535271_4536249_-	elongation factor P--(R)-beta-lysine ligase	NA	A0A2K9KZX5	Tupanvirus	28.2	6.8e-28
AUM24490.1|4536573_4538382_+	fumarate reductase (quinol) flavoprotein subunit	NA	NA	NA	NA	NA
AUM24491.1|4538374_4539109_+	succinate dehydrogenase/fumarate reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AUM24492.1|4539119_4539515_+	fumarate reductase subunit C	NA	NA	NA	NA	NA
AUM24493.1|4539525_4539885_+	fumarate reductase subunit D	NA	NA	NA	NA	NA
AUM24494.1|4539947_4541081_+	BlaEC family class C beta-lactamase	NA	NA	NA	NA	NA
AUM24495.1|4541169_4541703_+	hypothetical protein	NA	A0A1W6JNX6	Morganella_phage	55.0	2.7e-47
AUM24496.1|4541699_4542017_-	quaternary ammonium compound-resistance protein SugE	NA	NA	NA	NA	NA
AUM24497.1|4542198_4542345_-	entericidin B	NA	NA	NA	NA	NA
AUM24498.1|4542455_4542581_-	entericidin A	NA	NA	NA	NA	NA
AUM24499.1|4542632_4543199_-	elongation factor P	NA	NA	NA	NA	NA
AUM24500.1|4543240_4544269_+	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA	NA
AUM24501.1|4544663_4545533_+	hypothetical protein	NA	NA	NA	NA	NA
AUM24502.1|4545735_4546089_-	DUF4156 domain-containing protein	NA	NA	NA	NA	NA
AUM24503.1|4546226_4547873_-	molecular chaperone GroEL	NA	A0A2I7SAK5	Vibrio_phage	68.9	5.3e-190
AUM24504.1|4547916_4548210_-	co-chaperone GroES	NA	K4F9I2	Cronobacter_phage	45.4	9.2e-13
AUM24505.1|4548485_4549742_+	L-methionine/branched-chain amino acid transporter	NA	NA	NA	NA	NA
AUM24506.1|4549757_4550234_-	suppressor of F exclusion of phage T7	NA	NA	NA	NA	NA
AUM24507.1|4550570_4552007_+	aspartate ammonia-lyase	NA	NA	NA	NA	NA
AUM24508.1|4552124_4553426_+	anaerobic C4-dicarboxylate transporter DcuA	NA	NA	NA	NA	NA
AUM24509.1|4553541_4553880_+	divalent-cation tolerance protein CutA	NA	NA	NA	NA	NA
AUM24510.1|4553855_4555553_+	protein-disulfide reductase DsbD	NA	NA	NA	NA	NA
AUM24511.1|4555589_4556165_+	transcriptional regulator	NA	NA	NA	NA	NA
AUM24512.1|4557412_4558626_-|transposase	IS3 family transposase	transposase	Q6H9S6	Enterobacteria_phage	99.7	3.4e-170
AUM24513.1|4559191_4560464_+|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	98.0	4.9e-175
>prophage 16
CP023673	Escherichia coli strain SMN013SH2 chromosome, complete genome	5143533	4682133	4753408	5143533	holin,integrase,tRNA,terminase,tail,lysis,transposase	Stx2-converting_phage(27.27%)	85	4685435:4685452	4712042:4712059
AUM24626.1|4682133_4682828_-|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM24627.1|4683479_4683626_-|integrase	integrase	integrase	NA	NA	NA	NA
AUM24628.1|4683584_4683866_+	hypothetical protein	NA	NA	NA	NA	NA
AUM24629.1|4683964_4684501_-	ssDNA-binding protein	NA	A0A0A0P1Q9	Enterobacteria_phage	78.7	1.1e-56
AUM24630.1|4684755_4687578_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	56.1	0.0e+00
4685435:4685452	attL	TTTCCGGTGGTACAGCGG	NA	NA	NA	NA
AUM24631.1|4687612_4687969_-	hypothetical protein	NA	NA	NA	NA	NA
AUM24632.1|4687972_4688389_-	thiamine phosphate synthase	NA	NA	NA	NA	NA
AUM24633.1|4688499_4689213_-	acid phosphatase AphA	NA	NA	NA	NA	NA
AUM24634.1|4690338_4691532_-	aromatic amino acid transaminase	NA	NA	NA	NA	NA
AUM24635.1|4691784_4692864_-	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	27.9	4.0e-29
AUM24636.1|4692916_4694332_-	replicative DNA helicase	NA	O80281	Escherichia_phage	78.3	4.8e-200
AUM24637.1|4694414_4695398_+	quinone oxidoreductase	NA	NA	NA	NA	NA
AUM24638.1|4697742_4701129_+	DUF4765 domain-containing protein	NA	A0A0N7KZG3	Stx2-converting_phage	100.0	0.0e+00
AUM25251.1|4701306_4701636_-	DUF1076 domain-containing protein	NA	H6WZN1	Escherichia_phage	61.5	1.7e-31
AUM24639.1|4701673_4702368_-|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
AUM24640.1|4702461_4702824_+	hypothetical protein	NA	Q8SBF8	Shigella_phage	100.0	8.6e-61
AUM24641.1|4702889_4703714_+	DUF2303 domain-containing protein	NA	A0A0P0ZBZ4	Stx2-converting_phage	100.0	2.7e-150
AUM24642.1|4703841_4704378_+	HD family hydrolase	NA	A0A0P0ZCH9	Stx2-converting_phage	100.0	9.7e-101
AUM24643.1|4704368_4704719_+	Eae protein	NA	A0A0P0ZBF8	Stx2-converting_phage	100.0	7.0e-60
AUM24644.1|4705846_4705981_+	hypothetical protein	NA	A0A0P0ZDP5	Stx2-converting_phage	100.0	4.9e-22
AUM24645.1|4705999_4706254_+	excisionase	NA	Q859D3	Escherichia_coli_phage	100.0	3.0e-44
AUM24646.1|4706287_4707574_+|integrase	site-specific integrase	integrase	A0A0N7KZF5	Stx2-converting_phage	100.0	5.8e-253
AUM24647.1|4707718_4708804_+	hypothetical protein	NA	A0A0C4UQU9	Shigella_phage	53.2	1.1e-98
AUM24648.1|4708794_4709355_+	DUF2313 domain-containing protein	NA	C9DGQ7	Escherichia_phage	49.1	3.9e-44
AUM24649.1|4709354_4710266_+|tail	phage tail protein	tail	C9DGQ8	Escherichia_phage	39.5	6.4e-28
AUM24650.1|4710300_4710822_-|tail	phage tail protein	tail	A0A0U2QV64	Escherichia_phage	52.6	2.1e-47
AUM25252.1|4710901_4711105_-|tail	phage tail protein	tail	NA	NA	NA	NA
AUM24651.1|4711127_4711313_+	hypothetical protein	NA	NA	NA	NA	NA
AUM24652.1|4711326_4711887_+	DNA-invertase	NA	A0A0C4UR34	Shigella_phage	75.7	4.3e-75
AUM24653.1|4712813_4713851_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
4712042:4712059	attR	TTTCCGGTGGTACAGCGG	NA	NA	NA	NA
AUM24654.1|4714304_4715042_-	protein mom	NA	A0A0C4UQZ7	Shigella_phage	79.0	7.5e-104
AUM24655.1|4714995_4715196_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AUM24656.1|4715810_4716056_-	DUF826 domain-containing protein	NA	NA	NA	NA	NA
AUM24657.1|4716091_4716271_-	DUF1378 domain-containing protein	NA	Q5MBW3	Stx1-converting_phage	55.3	6.0e-07
AUM24658.1|4716328_4717843_-	sialate O-acetylesterase	NA	H6WZJ9	Escherichia_phage	60.1	1.2e-164
AUM24659.1|4719086_4720625_-|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	99.6	6.5e-299
AUM24660.1|4720674_4721022_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	100.0	2.2e-61
AUM24661.1|4721018_4721399_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBP6	Stx2-converting_phage	100.0	1.4e-66
AUM24662.1|4721497_4721713_+	DinI family protein	NA	Q687E4	Enterobacteria_phage	98.6	1.9e-31
AUM24663.1|4722084_4723071_-	peptidase M85	NA	NA	NA	NA	NA
AUM24664.1|4723099_4723291_-	hypothetical protein	NA	NA	NA	NA	NA
AUM24665.1|4723500_4723770_-|tail	phage tail protein	tail	H6WZN0	Escherichia_phage	97.8	1.9e-44
AUM24666.1|4723771_4725085_-|tail	phage tail protein	tail	A0A0P0ZE15	Stx2-converting_phage	97.9	3.6e-80
AUM24667.1|4725149_4725749_-	Ail/Lom family protein	NA	A0A0P0ZCF6	Stx2-converting_phage	97.0	5.9e-107
AUM24668.1|4725815_4729295_-|tail	phage tail protein	tail	B6DZB5	Enterobacteria_phage	96.5	0.0e+00
AUM24669.1|4729299_4729563_-	hypothetical protein	NA	A0A0N7KZG0	Stx2-converting_phage	100.0	3.7e-45
AUM24670.1|4729559_4730123_-|terminase	terminase small subunit	terminase	A0A0P0ZDD1	Stx2-converting_phage	100.0	4.7e-90
AUM24671.1|4730410_4730776_-	HNH endonuclease	NA	A0A0P0ZCH0	Stx2-converting_phage	100.0	2.0e-65
AUM24672.1|4730817_4731045_+	DUF3950 domain-containing protein	NA	A0A0P0ZCA1	Stx2-converting_phage	100.0	3.9e-35
AUM24673.1|4731407_4731875_-|lysis	lysis protein	lysis	Q7AYI6	Enterobacteria_phage	96.1	1.8e-74
AUM24674.1|4731876_4732095_-	hypothetical protein	NA	Q687G2	Enterobacteria_phage	93.3	1.0e-16
AUM24675.1|4732172_4732706_-	lysozyme	NA	A0A0N7KZF9	Stx2-converting_phage	98.3	2.8e-100
AUM24676.1|4732756_4733101_-	DUF1327 domain-containing protein	NA	A0A0P0ZD64	Stx2-converting_phage	100.0	1.0e-58
AUM24677.1|4733105_4733321_-|holin	holin	holin	Q6H9V8	Enterobacteria_phage	98.6	7.7e-33
AUM24678.1|4733759_4735610_-	9-O-acetyl-N-acetylneuraminic acid deacetylase	NA	B6DZ89	Enterobacteria_phage	98.9	0.0e+00
AUM24679.1|4736023_4736290_-	hypothetical protein	NA	NA	NA	NA	NA
AUM24680.1|4737054_4738113_-	site-specific DNA-methyltransferase	NA	A0A0N7KZF8	Stx2-converting_phage	86.7	4.9e-181
AUM24681.1|4738263_4738467_-	hypothetical protein	NA	A0A291AWX6	Escherichia_phage	98.5	1.8e-31
AUM24682.1|4738737_4739184_+	hypothetical protein	NA	NA	NA	NA	NA
AUM24683.1|4739268_4739634_-	antitermination protein	NA	Q777W5	Enterobacteria_phage	81.8	7.9e-54
AUM24684.1|4739651_4740641_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	99.4	4.7e-194
AUM24685.1|4740648_4741464_-	DNA-binding protein	NA	U5P4K5	Shigella_phage	99.6	2.9e-149
AUM24686.1|4741626_4742022_-	RusA family crossover junction endodeoxyribonuclease	NA	A5LH74	Enterobacteria_phage	96.0	9.1e-64
AUM24687.1|4742018_4742672_-	phage N-6-adenine-methyltransferase	NA	Q8SBE9	Shigella_phage	99.5	3.3e-127
AUM24688.1|4742766_4743573_-	helix-turn-helix domain-containing protein	NA	A5LH71	Enterobacteria_phage	88.1	7.9e-123
AUM25253.1|4743569_4743794_-	hypothetical protein	NA	A0A291AX25	Escherichia_phage	94.6	8.5e-35
AUM24689.1|4743798_4744344_-	immunity protein	NA	Q8SBF3	Shigella_phage	98.9	4.0e-94
AUM25254.1|4744306_4744486_-	DUF4222 domain-containing protein	NA	S5M7S5	Escherichia_phage	94.9	5.0e-30
AUM24690.1|4744632_4745184_-	hypothetical protein	NA	A0A291AWW8	Escherichia_phage	100.0	4.5e-101
AUM24691.1|4745227_4745428_-	transcriptional regulator	NA	U5P445	Shigella_phage	100.0	7.9e-32
AUM24692.1|4745518_4746193_+	LexA family transcriptional repressor	NA	U5P0T5	Shigella_phage	99.1	8.6e-131
AUM24693.1|4746262_4746493_+	hypothetical protein	NA	A0A291AWY6	Escherichia_phage	97.4	2.5e-13
AUM24694.1|4746594_4746789_-	hypothetical protein	NA	A0A291AWX8	Escherichia_phage	100.0	1.0e-31
AUM24695.1|4746861_4747224_+	hypothetical protein	NA	Q8SBF8	Shigella_phage	100.0	8.6e-61
AUM24696.1|4747288_4748113_+	DUF2303 domain-containing protein	NA	U5P439	Shigella_phage	100.0	6.0e-150
AUM24697.1|4748240_4748777_+	HD family hydrolase	NA	S5MW55	Escherichia_phage	100.0	7.4e-101
AUM24698.1|4748767_4749130_+	hypothetical protein	NA	S5MC15	Escherichia_phage	99.2	2.1e-67
AUM24699.1|4749126_4749330_+	hypothetical protein	NA	K7PLX1	Enterobacteria_phage	98.5	5.2e-31
AUM24700.1|4749322_4749562_+	hypothetical protein	NA	S5MQM0	Escherichia_phage	100.0	4.4e-37
AUM24701.1|4749558_4750113_+	hypothetical protein	NA	K7PJQ4	Enterobacteria_phage	99.5	4.1e-102
AUM24702.1|4750114_4750306_+	hypothetical protein	NA	K7PKJ7	Enterobacteria_phage	98.4	1.6e-26
AUM24703.1|4751315_4751888_+	3'-5' exoribonuclease	NA	K7PLW7	Enterobacteria_phage	100.0	2.4e-110
AUM24704.1|4751924_4752206_+	pyocin activator protein PrtN	NA	K7PGU0	Enterobacteria_phage	96.8	2.8e-43
AUM24705.1|4752623_4753157_-	hypothetical protein	NA	K7PKJ4	Enterobacteria_phage	99.4	5.3e-99
AUM24706.1|4753285_4753408_-|tRNA	tRNA-dihydrouridine synthase	tRNA	NA	NA	NA	NA
>prophage 1
CP023674	Escherichia coli strain SMN013SH2 plasmid pO177A2, complete sequence	87524	0	9556	87524		Macacine_betaherpesvirus(50.0%)	10	NA	NA
AUM25268.1|0_618_+	hypothetical protein	NA	Q6H9S6	Enterobacteria_phage	99.0	3.0e-106
AUM25269.1|666_951_+	hypothetical protein	NA	NA	NA	NA	NA
AUM25270.1|1461_2202_+	recombinase	NA	I3WFA4	Macacine_betaherpesvirus	57.6	2.0e-24
AUM25271.1|2486_3464_-	repFIB replication protein A	NA	J9Q7H0	Salmonella_phage	59.2	3.9e-100
AUM25272.1|4795_5962_+	protein SopA	NA	A0A2I6B2X3	Macacine_betaherpesvirus	100.0	7.0e-229
AUM25273.1|5961_6933_+	protein SopB	NA	I3WF22	Macacine_betaherpesvirus	100.0	4.8e-175
AUM25274.1|7274_7547_+	hypothetical protein	NA	NA	NA	NA	NA
AUM25336.1|7584_8487_+	hypothetical protein	NA	NA	NA	NA	NA
AUM25275.1|8490_8796_+	hypothetical protein	NA	NA	NA	NA	NA
AUM25276.1|8872_9556_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	37.4	1.9e-29
>prophage 2
CP023674	Escherichia coli strain SMN013SH2 plasmid pO177A2, complete sequence	87524	22493	71147	87524	transposase	Stx2-converting_phage(53.33%)	42	NA	NA
AUM25293.1|22493_23656_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	4.0e-51
AUM25294.1|23727_24165_+	conjugal transfer protein TraS	NA	NA	NA	NA	NA
AUM25295.1|24178_24910_+	complement resistance protein TraT	NA	NA	NA	NA	NA
AUM25296.1|25544_26757_+|transposase	IS3 family transposase	transposase	Q6H9S6	Enterobacteria_phage	99.0	8.4e-169
AUM25297.1|27706_27949_+	hypothetical protein	NA	NA	NA	NA	NA
AUM25298.1|28215_29037_+	carbohydrate transporter	NA	NA	NA	NA	NA
AUM25299.1|29036_30143_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AUM25300.1|30232_31954_+	phosphoethanolamine transferase CptA	NA	NA	NA	NA	NA
AUM25301.1|32027_33026_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA	NA
AUM25302.1|33619_35158_-|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	99.6	6.5e-299
AUM25303.1|35207_35555_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	100.0	2.2e-61
AUM25304.1|35551_35932_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBP6	Stx2-converting_phage	100.0	1.4e-66
AUM25339.1|36165_36531_-	hypothetical protein	NA	NA	NA	NA	NA
AUM25305.1|36541_36733_-	hypothetical protein	NA	K7PLX1	Enterobacteria_phage	41.3	3.5e-05
AUM25306.1|37037_40940_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	Q9LA58	Enterobacterial_phage	40.3	1.6e-237
AUM25307.1|41382_42921_-|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	99.6	6.5e-299
AUM25308.1|42970_43318_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	100.0	2.2e-61
AUM25309.1|43577_43958_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBP6	Stx2-converting_phage	100.0	1.4e-66
AUM25310.1|43954_44302_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	100.0	2.2e-61
AUM25311.1|44351_45890_+|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	99.6	6.5e-299
AUM25312.1|45947_46361_+	hypothetical protein	NA	NA	NA	NA	NA
AUM25313.1|47290_47671_+	colicin transporter	NA	NA	NA	NA	NA
AUM25314.1|48073_49513_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
AUM25315.1|49516_51637_-	type I secretion system permease/ATPase	NA	W8CYL7	Bacillus_phage	30.2	1.6e-45
AUM25316.1|51686_54683_-	enterohemolysin	NA	NA	NA	NA	NA
AUM25317.1|54684_55176_-	toxin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
AUM25318.1|57538_57937_-	PIN domain-containing protein	NA	NA	NA	NA	NA
AUM25319.1|57936_58167_-	antitoxin	NA	NA	NA	NA	NA
AUM25320.1|58245_63516_+	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA	NA
AUM25321.1|63535_64282_+	type-F conjugative transfer system pilin acetylase TraX	NA	A0A077JBM8	Xanthomonas_phage	30.4	1.6e-08
AUM25322.1|64336_64897_+	conjugal transfer protein	NA	NA	NA	NA	NA
AUM25323.1|65032_65245_+	hypothetical protein	NA	NA	NA	NA	NA
AUM25324.1|65660_65870_-	hypothetical protein	NA	NA	NA	NA	NA
AUM25340.1|65925_66075_+	Hok/Gef family protein	NA	NA	NA	NA	NA
AUM25325.1|66358_66616_+	transcriptional regulator	NA	NA	NA	NA	NA
AUM25342.1|66637_66769_-	replication protein RepA	NA	NA	NA	NA	NA
AUM25341.1|66847_66922_+	positive regulator of RepFIC repA1 expression	NA	NA	NA	NA	NA
AUM25326.1|66902_67397_+	hypothetical protein	NA	NA	NA	NA	NA
AUM25327.1|67389_68247_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA	NA
AUM25328.1|69157_69442_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
AUM25329.1|69441_69717_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
AUM25330.1|69933_71147_-|transposase	IS3 family transposase	transposase	Q6H9S6	Enterobacteria_phage	99.7	3.4e-170
>prophage 3
CP023674	Escherichia coli strain SMN013SH2 plasmid pO177A2, complete sequence	87524	83057	84271	87524	transposase	Enterobacteria_phage(100.0%)	1	NA	NA
AUM25332.1|83057_84271_-|transposase	IS3 family transposase	transposase	Q6H9S6	Enterobacteria_phage	99.0	8.4e-169
