The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	0	4221	2333691	transposase	Vibrio_phage(33.33%)	4	NA	NA
AUK52819.1|423_924_+	single-stranded DNA-binding protein	NA	I3PUY5	Vibrio_phage	55.6	4.0e-40
AUK52820.1|1106_1571_+|transposase	transposase	transposase	A0A0A8WIU6	Clostridium_phage	36.1	2.3e-13
AUK52821.1|1699_2413_-	hypothetical protein	NA	NA	NA	NA	NA
AUK52822.1|2706_4221_+	D-xylose ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.5	1.4e-19
>prophage 2
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	13016	14531	2333691		Staphylococcus_phage(100.0%)	1	NA	NA
AUK52832.1|13016_14531_-	xylose ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.7	9.6e-21
>prophage 3
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	35154	38909	2333691		Escherichia_phage(100.0%)	4	NA	NA
AUK52850.1|35154_35916_-	DeoR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	52.4	7.9e-64
AUK52851.1|36130_37036_+	oxidoreductase	NA	A0A077SLF7	Escherichia_phage	73.2	5.2e-115
AUK52852.1|37038_38280_+	hypothetical protein	NA	A0A077SLJ7	Escherichia_phage	53.5	3.2e-115
AUK52853.1|38276_38909_+	aldolase	NA	A0A077SK32	Escherichia_phage	60.0	2.2e-64
>prophage 4
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	46275	50540	2333691		Tupanvirus(33.33%)	3	NA	NA
AUK52860.1|46275_47460_-	translation elongation factor Tu	NA	A0A2K9L516	Tupanvirus	25.3	8.3e-12
AUK52861.1|48177_49128_+	type I pantothenate kinase	NA	A0A1B1ISL9	uncultured_Mediterranean_phage	32.7	3.9e-28
AUK52862.1|49208_50540_-	HslU--HslV peptidase ATPase subunit	NA	A0A2H5BJT2	Erwinia_phage	29.1	4.6e-43
>prophage 5
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	53917	61987	2333691		Escherichia_phage(60.0%)	7	NA	NA
AUK52866.1|53917_54637_+	hypothetical protein	NA	G3MA03	Bacillus_virus	34.2	2.0e-16
AUK52867.1|54882_57321_+	dimethyl sulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.1	1.4e-223
AUK52868.1|57331_57952_+	dimethylsulfoxide reductase, chain B	NA	A0A077SL61	Escherichia_phage	58.8	1.4e-71
AUK52869.1|57953_58802_+	dimethyl sulfoxide reductase	NA	NA	NA	NA	NA
AUK54900.1|58890_59496_+	DMSO reductase maturation protein DsmD	NA	A0A077SLS7	Escherichia_phage	36.7	3.1e-23
AUK52870.1|59513_60062_+	ferredoxin-type protein NapF	NA	NA	NA	NA	NA
AUK52871.1|60112_61987_-	selenocysteine-specific translation elongation factor	NA	A0A2K9KZ60	Tupanvirus	26.2	7.5e-15
>prophage 6
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	65186	69142	2333691	integrase	Escherichia_phage(100.0%)	4	58163:58177	69521:69535
58163:58177	attL	ATTTAACGCATTAAA	NA	NA	NA	NA
AUK52874.1|65186_66470_+|integrase	integrase	integrase	A0A1B5FPC6	Escherichia_phage	34.4	6.6e-63
AUK52875.1|66943_67549_+	hypothetical protein	NA	NA	NA	NA	NA
AUK52876.1|67979_68402_+	hypothetical protein	NA	NA	NA	NA	NA
AUK52877.1|68422_69142_+	hypothetical protein	NA	A0A2R2Z320	Escherichia_phage	49.2	3.6e-26
69521:69535	attR	ATTTAACGCATTAAA	NA	NA	NA	NA
>prophage 7
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	72517	79045	2333691		Lactobacillus_prophage(50.0%)	4	NA	NA
AUK52885.1|72517_74695_+	DNA primase	NA	A0A1W6JPG0	Morganella_phage	42.0	2.8e-122
AUK52886.1|75708_76659_+	abortive phage infection protein	NA	A0A1Q1PVS3	Staphylococcus_phage	25.0	4.5e-08
AUK52887.1|77643_78693_+	acetyltransferase	NA	Q6SE88	Lactobacillus_prophage	41.1	3.7e-64
AUK52888.1|78670_79045_+	hypothetical protein	NA	Q6SE87	Lactobacillus_prophage	46.4	2.3e-24
>prophage 8
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	84869	86876	2333691		Vibrio_phage(100.0%)	1	NA	NA
AUK52896.1|84869_86876_+	transporter	NA	A0A2I7QNT1	Vibrio_phage	28.2	3.2e-24
>prophage 9
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	100325	101702	2333691		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
AUK52911.1|100325_101702_+	UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase	NA	A0A0N7G7I9	Chrysochromulina_ericina_virus	36.9	5.3e-34
>prophage 10
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	117595	118660	2333691		Bacillus_phage(100.0%)	1	NA	NA
AUK52921.1|117595_118660_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	58.5	9.8e-113
>prophage 11
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	129397	130105	2333691		Planktothrix_phage(100.0%)	1	NA	NA
AUK52927.1|129397_130105_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.3	2.7e-18
>prophage 12
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	137203	139786	2333691		Catovirus(100.0%)	1	NA	NA
AUK52934.1|137203_139786_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.6	2.8e-28
>prophage 13
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	146847	152932	2333691	tRNA	uncultured_Mediterranean_phage(66.67%)	4	NA	NA
AUK54903.1|146847_149751_-	RNA polymerase-binding ATPase	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	33.9	1.4e-20
AUK52943.1|150026_150731_+	nicotinamide riboside transporter pnuC	NA	U5J9C5	Bacillus_phage	39.4	6.0e-42
AUK52944.1|150778_151492_-|tRNA	tRNA (adenine-N(6)-)-methyltransferase	tRNA	NA	NA	NA	NA
AUK52945.1|151603_152932_+	ATP-dependent RNA helicase SrmB	NA	A0A1B1IS59	uncultured_Mediterranean_phage	30.6	8.1e-48
>prophage 14
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	158757	163356	2333691		Bacillus_phage(50.0%)	4	NA	NA
AUK52951.1|158757_160200_-	fructosidase	NA	S6ATV4	Bacillus_phage	22.7	3.6e-09
AUK54904.1|160237_161164_-	aminoimidazole riboside kinase	NA	NA	NA	NA	NA
AUK52952.1|161349_161961_+	lysogenization protein HflD	NA	NA	NA	NA	NA
AUK52953.1|161988_163356_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	46.9	4.3e-113
>prophage 15
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	171127	171388	2333691		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
AUK52960.1|171127_171388_-	ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	54.2	1.0e-18
>prophage 16
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	178592	185878	2333691		Streptococcus_phage(66.67%)	7	NA	NA
AUK52967.1|178592_179906_-	23S rRNA methyltransferase	NA	A0A1X9I6F4	Streptococcus_phage	27.2	2.9e-37
AUK52968.1|179909_180632_-	DNA repair protein RecO	NA	NA	NA	NA	NA
AUK52969.1|180811_181546_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AUK54905.1|181558_182116_+	hypothetical protein	NA	NA	NA	NA	NA
AUK52970.1|182115_182538_+	Holliday junction DNA helicase RuvA	NA	NA	NA	NA	NA
AUK52971.1|182627_183929_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	59.3	8.8e-132
AUK52972.1|184249_185878_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.4	7.1e-155
>prophage 17
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	194135	213011	2333691		Vibrio_phage(20.0%)	20	NA	NA
AUK52982.1|194135_195125_-	hypothetical protein	NA	A0A076FFX9	Aureococcus_anophage	28.4	4.6e-32
AUK52983.1|195397_197137_-	hypothetical protein	NA	NA	NA	NA	NA
AUK52984.1|197138_197363_-	hypothetical protein	NA	NA	NA	NA	NA
AUK52985.1|197503_198520_+	nucleoid-associated protein YejK	NA	A0A1V0E8C0	Vibrio_phage	43.8	3.9e-74
AUK52986.1|198586_199000_+	cell envelope protein SmpA	NA	NA	NA	NA	NA
AUK52987.1|199064_199766_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	37.1	5.6e-32
AUK52988.1|199820_201224_+	two-component system sensor histidine kinase CpxA	NA	NA	NA	NA	NA
AUK52989.1|201278_201986_-	hypothetical protein	NA	A0A2I7SAW6	Vibrio_phage	53.4	1.3e-57
AUK52990.1|202174_202645_+	hypothetical protein	NA	NA	NA	NA	NA
AUK52991.1|202729_202942_+	hypothetical protein	NA	A0A218MNH0	uncultured_virus	47.7	2.0e-09
AUK52992.1|203081_205256_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	53.4	1.0e-204
AUK52993.1|205403_205898_-	dihydrofolate reductase	NA	A0A076GDN3	Bacillus_phage	40.5	4.7e-33
AUK52994.1|205934_206396_-	hypothetical protein	NA	NA	NA	NA	NA
AUK52995.1|206397_207186_-	hypothetical protein	NA	NA	NA	NA	NA
AUK52996.1|207351_208455_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.2	5.1e-64
AUK52997.1|208478_208802_+	hypothetical protein	NA	NA	NA	NA	NA
AUK52998.1|208863_209496_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AUK52999.1|209520_210408_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
AUK53000.1|210549_211851_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.1	1.7e-18
AUK53001.1|211847_213011_+	8-amino-7-oxononanoate synthase	NA	V5LQ39	Emiliania_huxleyi_virus	28.3	1.5e-13
>prophage 18
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	216064	218043	2333691		Planktothrix_phage(50.0%)	2	NA	NA
AUK53006.1|216064_217054_-	oligopeptide ABC transporter ATP-binding protein OppF	NA	G9BWD6	Planktothrix_phage	33.8	2.0e-22
AUK53007.1|217050_218043_-	oligopeptide ABC transporter ATP-binding protein OppD	NA	G3M9Y6	Bacillus_virus	24.6	1.8e-12
>prophage 19
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	225777	226997	2333691		Trichoplusia_ni_ascovirus(50.0%)	2	NA	NA
AUK53016.1|225777_226506_+	3-oxoacyl-ACP reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.7	1.7e-15
AUK53017.1|226766_226997_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	50.0	3.0e-11
>prophage 20
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	231101	232373	2333691		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
AUK53021.1|231101_232373_+	ATP-dependent RNA helicase RhlB	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	28.9	1.5e-38
>prophage 21
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	236320	238419	2333691		Synechococcus_phage(50.0%)	2	NA	NA
AUK53026.1|236320_237208_+	rare lipoprotein A	NA	F5B3X9	Synechococcus_phage	55.0	1.1e-16
AUK53027.1|237234_238419_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	44.4	2.3e-86
>prophage 22
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	249679	290364	2333691	holin,integrase,transposase,tail,terminase	Mannheimia_phage(42.86%)	58	242983:243033	288121:288171
242983:243033	attL	AATTAATGGCACGCCCTATTGGATTCGAACCAATGACCTACGGCTTAGAAG	NA	NA	NA	NA
AUK53034.1|249679_250300_-|tail	phage tail protein	tail	A0A0M3LQC4	Mannheimia_phage	57.4	1.1e-52
AUK53035.1|250242_250986_-|tail	phage tail protein	tail	A0A0M3LQI5	Mannheimia_phage	59.6	7.4e-83
AUK53036.1|250990_251704_-|tail	phage minor tail protein L	tail	A0A0M3LPR8	Mannheimia_phage	63.9	2.1e-82
AUK53037.1|251793_252123_-	hypothetical protein	NA	S5MW28	Escherichia_phage	37.1	3.2e-14
AUK54906.1|252125_254570_-|tail	tail length tape measure protein	tail	A0A0M3LSE2	Mannheimia_phage	57.0	1.6e-150
AUK53038.1|254628_255024_-	hypothetical protein	NA	A0A0M3LR23	Mannheimia_phage	83.2	7.7e-55
AUK53039.1|255091_255556_-	hypothetical protein	NA	A0A0M3LR40	Mannheimia_phage	50.0	5.2e-34
AUK53040.1|255586_256258_-	hypothetical protein	NA	A0A0M3LPR4	Mannheimia_phage	42.9	1.5e-42
AUK53041.1|256311_256794_-|tail	phage tail protein	tail	A0A0M3LPR0	Mannheimia_phage	62.0	2.0e-44
AUK53042.1|256805_257177_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53043.1|257173_257545_-	hypothetical protein	NA	F1C5E3	Cronobacter_phage	51.2	1.3e-24
AUK53044.1|257549_257894_-	hypothetical protein	NA	A0A0M3LSC9	Mannheimia_phage	57.9	3.0e-31
AUK54907.1|257896_258265_-	hypothetical protein	NA	A0A0M3LQS8	Mannheimia_phage	42.1	4.7e-22
AUK53045.1|258777_259776_-	encapsulating for peroxidase	NA	A0A0M3LQZ1	Mannheimia_phage	74.7	9.1e-145
AUK53046.1|259787_260222_-	hypothetical protein	NA	A0A0M3LPQ2	Mannheimia_phage	75.7	1.1e-54
AUK53047.1|260221_261568_-	hypothetical protein	NA	A0A0M3LQ78	Mannheimia_phage	55.3	4.0e-127
AUK53048.1|261582_262554_-	hypothetical protein	NA	F1C5D8	Cronobacter_phage	41.0	1.6e-53
AUK53049.1|262507_263953_-	hypothetical protein	NA	A0A0M3LPQ5	Mannheimia_phage	58.6	2.4e-146
AUK53050.1|263967_265194_-|terminase	terminase	terminase	A0A0M3LTA2	Mannheimia_phage	77.0	9.4e-192
AUK53051.1|265177_265675_-|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	70.7	7.4e-47
AUK53052.1|265968_266403_+	CopG family transcriptional regulator	NA	A0A0R6PJ17	Moraxella_phage	38.0	1.0e-20
AUK53053.1|266624_266948_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53054.1|266950_267535_-	hypothetical protein	NA	Q7Y5V0	Haemophilus_phage	55.3	6.5e-58
AUK53055.1|267506_267872_-|holin	phage holin, lambda family	holin	NA	NA	NA	NA
AUK53056.1|268460_268826_-	hypothetical protein	NA	A0A0M3LR87	Mannheimia_phage	27.3	3.5e-09
AUK53057.1|268825_269428_-	recombinase NinG	NA	H6WRY9	Salmonella_phage	38.2	6.3e-32
AUK53058.1|269515_269728_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53059.1|269801_270260_-	NinB protein	NA	Q7Y5V7	Haemophilus_phage	53.4	5.8e-38
AUK54908.1|270249_270780_-	phage N-6-adenine-methyltransferase	NA	A0A0M3LNW2	Mannheimia_phage	58.9	1.0e-54
AUK53060.1|270789_271479_-	replication protein P	NA	D0UIL4	Aggregatibacter_phage	34.1	1.4e-32
AUK53061.1|271478_272381_-	hypothetical protein	NA	A0A0U4JX08	Bacillus_phage	37.7	5.5e-32
AUK53062.1|272382_272736_-	hypothetical protein	NA	A0A1C9LVX4	Vibrio_phage	33.6	1.3e-08
AUK53063.1|272732_272993_-	hypothetical protein	NA	D0UIL6	Aggregatibacter_phage	70.8	6.5e-18
AUK53064.1|273245_273698_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53065.1|273746_273944_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53066.1|274067_274745_+	transcriptional regulator	NA	A0A1B1P9J5	Acinetobacter_phage	29.8	3.2e-24
AUK53067.1|274827_275565_+	toxin HipA	NA	NA	NA	NA	NA
AUK53068.1|275561_276386_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53069.1|276732_276918_-	hypothetical protein	NA	A0A2P1N580	Mycobacterium_phage	57.5	4.7e-07
AUK53070.1|276929_277151_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53071.1|277392_277620_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53072.1|277633_277930_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53073.1|278383_278695_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53074.1|278761_279046_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53075.1|279032_279269_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53076.1|279616_280261_+	ribonuclease H	NA	R9ZX90	Cellulophaga_phage	25.9	8.0e-09
AUK53077.1|280303_281005_+	single-stranded DNA-binding protein	NA	A0A0A7RVW0	Clostridium_phage	42.6	4.2e-19
AUK53078.1|281015_281444_+	single-stranded DNA-binding protein	NA	A0A2I7RK19	Vibrio_phage	67.0	2.5e-35
AUK53079.1|281935_282724_+	hypothetical protein	NA	C5IHK3	Burkholderia_virus	29.2	3.2e-20
AUK53080.1|282776_283376_+	hypothetical protein	NA	A0A218KC93	Bacillus_phage	34.8	1.4e-18
AUK53081.1|283372_283738_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53082.1|283949_284438_+	hypothetical protein	NA	A0A0M3LS47	Mannheimia_phage	51.2	3.2e-34
AUK53083.1|284541_285450_+	hypothetical protein	NA	A0A0M4S6X1	Salmonella_phage	36.1	2.5e-40
AUK53084.1|285694_285916_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53085.1|285926_286649_+	DNA-binding protein	NA	G0ZND1	Cronobacter_phage	52.5	3.3e-35
AUK53086.1|287038_288094_+|integrase	integrase	integrase	A0A077KGX2	Edwardsiella_phage	37.9	1.6e-62
AUK53087.1|288468_289323_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	40.3	5.8e-31
288121:288171	attR	AATTAATGGCACGCCCTATTGGATTCGAACCAATGACCTACGGCTTAGAAG	NA	NA	NA	NA
AUK53088.1|289899_290364_-|transposase	transposase	transposase	A0A0A8WIU6	Clostridium_phage	36.1	2.3e-13
>prophage 23
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	295483	296641	2333691		Halovirus(100.0%)	1	NA	NA
AUK53092.1|295483_296641_-	carbamoyl phosphate synthase small subunit	NA	R4TGJ8	Halovirus	33.1	4.1e-48
>prophage 24
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	305772	314013	2333691		Prochlorococcus_phage(33.33%)	9	NA	NA
AUK53097.1|305772_306357_-	Fe-S biogenesis protein NfuA	NA	Q58MC7	Prochlorococcus_phage	38.5	6.3e-05
AUK53098.1|306454_307141_-	competence protein ComF	NA	NA	NA	NA	NA
AUK53099.1|307248_308061_-	hydrolase	NA	NA	NA	NA	NA
AUK53100.1|308267_309722_-	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.0	1.9e-42
AUK53101.1|309809_310202_-	GCN5 family acetyltransferase	NA	NA	NA	NA	NA
AUK53102.1|310465_310804_-	n-acetylglutamate synthase	NA	NA	NA	NA	NA
AUK53103.1|310987_311596_-	glutathione S-transferase	NA	NA	NA	NA	NA
AUK53104.1|311761_312460_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
AUK53105.1|312522_314013_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	38.0	1.5e-82
>prophage 25
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	318854	320471	2333691		Staphylococcus_phage(100.0%)	1	NA	NA
AUK53112.1|318854_320471_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	52.5	6.4e-140
>prophage 26
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	336638	337289	2333691		Bacillus_virus(100.0%)	1	NA	NA
AUK53128.1|336638_337289_-	cell division ATP-binding protein FtsE	NA	G3M9Y6	Bacillus_virus	31.5	8.3e-22
>prophage 27
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	353111	359843	2333691	transposase	Bacillus_virus(50.0%)	6	NA	NA
AUK54912.1|353111_354341_-	hypothetical protein	NA	A0A0S2SXL7	Bacillus_phage	37.6	3.8e-07
AUK53141.1|354523_355207_+	phosphoglyceromutase	NA	NA	NA	NA	NA
AUK53142.1|355327_355792_-|transposase	transposase	transposase	A0A0A8WIU6	Clostridium_phage	36.1	2.3e-13
AUK53143.1|355977_357036_-	iron ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.8	1.2e-25
AUK53144.1|357057_358752_-	ABC transporter permease	NA	NA	NA	NA	NA
AUK53145.1|358754_359843_-	ABC transporter	NA	G3M9Y6	Bacillus_virus	32.5	9.3e-26
>prophage 28
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	367009	367576	2333691		Acinetobacter_phage(100.0%)	1	NA	NA
AUK53151.1|367009_367576_-	anthranilate synthase component 2	NA	A0A0P0IKJ1	Acinetobacter_phage	34.0	2.8e-26
>prophage 29
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	376065	382949	2333691		Organic_Lake_phycodnavirus(50.0%)	3	NA	NA
AUK53160.1|376065_377724_-	thiol reductant ABC exporter subunit CydC	NA	F2Y1V5	Organic_Lake_phycodnavirus	23.2	6.2e-21
AUK53161.1|379589_380450_-	transporter	NA	NA	NA	NA	NA
AUK53162.1|380528_382949_-	DNA gyrase subunit B	NA	G3M9Z3	Bacillus_virus	34.6	1.8e-117
>prophage 30
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	399170	400096	2333691	tRNA	Dickeya_phage(50.0%)	2	NA	NA
AUK53182.1|399170_399410_-|tRNA	tRNA 2-thiouridine(34) synthase TusA	tRNA	A0A140XB86	Dickeya_phage	66.7	4.7e-07
AUK53183.1|399487_400096_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	31.3	1.0e-21
>prophage 31
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	408186	409715	2333691	tRNA	Synechococcus_phage(50.0%)	2	NA	NA
AUK53186.1|408186_408699_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	39.8	1.1e-16
AUK53187.1|408761_409715_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	32.3	3.2e-06
>prophage 32
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	415984	416449	2333691	transposase	Clostridium_phage(100.0%)	1	NA	NA
AUK53195.1|415984_416449_+|transposase	transposase	transposase	A0A0A8WIU6	Clostridium_phage	36.1	2.3e-13
>prophage 33
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	426583	428612	2333691		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
AUK53202.1|426583_427372_-	aquaporin	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	29.8	6.3e-16
AUK53203.1|427535_428612_-	glycerophosphodiester phosphodiesterase	NA	A0A220BYK6	Staphylococcus_phage	39.0	5.4e-10
>prophage 34
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	437358	438858	2333691		Klebsiella_phage(100.0%)	1	NA	NA
AUK53211.1|437358_438858_+	ATP-binding protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	2.2e-81
>prophage 35
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	447017	448916	2333691		Catovirus(100.0%)	1	NA	NA
AUK53219.1|447017_448916_-	ATP-dependent DNA helicase RecQ	NA	A0A1V0SBK0	Catovirus	38.6	2.3e-88
>prophage 36
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	459496	460867	2333691		Streptococcus_phage(100.0%)	1	NA	NA
AUK53229.1|459496_460867_-	chloride channel protein EriC	NA	A0A1X9I5Z9	Streptococcus_phage	27.7	4.1e-10
>prophage 37
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	475866	478480	2333691		Enterococcus_phage(50.0%)	3	NA	NA
AUK53259.1|475866_477153_-	trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR	NA	A0A0C5K935	Enterococcus_phage	47.8	3.6e-93
AUK53260.1|477217_477469_-	cytoplasmic protein	NA	NA	NA	NA	NA
AUK53261.1|477835_478480_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	43.4	6.1e-41
>prophage 38
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	488484	488949	2333691	transposase	Clostridium_phage(100.0%)	1	NA	NA
AUK53268.1|488484_488949_+|transposase	transposase	transposase	A0A0A8WIU6	Clostridium_phage	36.1	2.3e-13
>prophage 39
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	496804	497797	2333691		Heterosigma_akashiwo_virus(100.0%)	1	NA	NA
AUK53275.1|496804_497797_+	aspartate--ammonia ligase	NA	A0A1C9C5F0	Heterosigma_akashiwo_virus	36.3	1.4e-49
>prophage 40
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	505760	509320	2333691		Tupanvirus(50.0%)	3	NA	NA
AUK53283.1|505760_507683_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	31.6	1.9e-69
AUK53284.1|507731_508346_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53285.1|508474_509320_-	RNA polymerase factor sigma-32	NA	A0A248SJA5	Salicola_phage	40.5	5.0e-43
>prophage 41
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	523930	525052	2333691		Thermus_phage(100.0%)	1	NA	NA
AUK53298.1|523930_525052_+	DNA protecting protein DprA	NA	S6BFL3	Thermus_phage	36.8	2.1e-33
>prophage 42
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	528278	532793	2333691		Synechococcus_phage(50.0%)	5	NA	NA
AUK53301.1|528278_529232_+	transaldolase	NA	A0A0E3G6C9	Synechococcus_phage	37.5	5.1e-12
AUK53302.1|529318_530146_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53303.1|530166_530619_-	NUDIX hydrolase	NA	NA	NA	NA	NA
AUK53304.1|530631_531357_-	pseudouridine synthase	NA	NA	NA	NA	NA
AUK53305.1|531545_532793_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	55.6	2.6e-08
>prophage 43
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	536055	536796	2333691		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
AUK53311.1|536055_536796_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	49.0	3.8e-63
>prophage 44
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	552493	555741	2333691		Ostreococcus_tauri_virus(50.0%)	3	NA	NA
AUK53327.1|552493_554143_-	acetolactate synthase 2 catalytic subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	31.2	2.6e-64
AUK53328.1|554502_555321_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54917.1|555357_555741_+	chromosome condensation protein CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	36.8	3.4e-07
>prophage 45
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	568193	569711	2333691		Staphylococcus_phage(100.0%)	1	NA	NA
AUK53340.1|568193_569711_-	sugar ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.0	3.8e-17
>prophage 46
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	575136	575715	2333691		Caulobacter_phage(100.0%)	1	NA	NA
AUK53346.1|575136_575715_-	hypothetical protein	NA	K4K6D8	Caulobacter_phage	31.3	1.4e-20
>prophage 47
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	581668	583139	2333691		Bacillus_virus(100.0%)	2	NA	NA
AUK53353.1|581668_582421_-	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	26.9	4.2e-09
AUK53354.1|582410_583139_-	phosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.6	3.9e-28
>prophage 48
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	586330	586882	2333691	tRNA	Pandoravirus(100.0%)	1	NA	NA
AUK53358.1|586330_586882_+|tRNA	tRNA threonylcarbamoyladenosine biosynthesis protein RimN	tRNA	A0A291ATS8	Pandoravirus	26.5	2.2e-07
>prophage 49
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	590592	592110	2333691		Staphylococcus_phage(100.0%)	1	NA	NA
AUK53362.1|590592_592110_+	autoinducer 2 ABC transporter ATP-binding protein LsrA	NA	A0A2H4PQG7	Staphylococcus_phage	30.0	9.6e-21
>prophage 50
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	604906	609012	2333691	tRNA	Klosneuvirus(33.33%)	3	NA	NA
AUK53375.1|604906_607531_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	36.5	3.9e-78
AUK53376.1|607664_607826_+	carbon storage regulator	NA	A0A2I7RT00	Vibrio_phage	60.8	1.2e-11
AUK53377.1|608124_609012_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	47.2	3.3e-61
>prophage 51
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	625582	634934	2333691		Bacillus_phage(25.0%)	9	NA	NA
AUK53392.1|625582_627427_-	multidrug ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.8e-29
AUK54918.1|627497_628541_-	glycosyl transferase	NA	NA	NA	NA	NA
AUK53393.1|628632_629355_+	3-deoxy-D-manno-octulosonic acid kinase	NA	NA	NA	NA	NA
AUK53394.1|629392_629869_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	37.2	2.0e-20
AUK53395.1|629865_631149_-	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
AUK53396.1|631231_631996_+	glycosyltransferase	NA	A0A1C3NFH8	Phage_NCTB	33.0	4.9e-05
AUK53397.1|632154_633183_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUK53398.1|633189_634182_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUK53399.1|634178_634934_+	iron ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	25.6	4.3e-14
>prophage 52
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	665467	670715	2333691		Synechococcus_phage(66.67%)	6	NA	NA
AUK53430.1|665467_666400_-	ADP-glyceromanno-heptose 6-epimerase	NA	E3SL51	Synechococcus_phage	39.6	6.5e-36
AUK53431.1|666839_667511_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
AUK53432.1|667529_668282_+	DNA-binding transcriptional repressor DeoR	NA	NA	NA	NA	NA
AUK53433.1|668320_668932_-	DNA-binding transcriptional regulator FabR	NA	NA	NA	NA	NA
AUK53434.1|668956_669853_-	DNA-binding transcriptional regulator OxyR	NA	A0A2P0ZL89	Lactobacillus_phage	21.9	9.4e-08
AUK53435.1|669989_670715_+	glutathione peroxidase	NA	A0A1D8KSL1	Synechococcus_phage	56.8	5.4e-46
>prophage 53
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	674874	681937	2333691		Streptococcus_phage(50.0%)	7	NA	NA
AUK53444.1|674874_676977_+	translation elongation factor G	NA	E4ZFJ7	Streptococcus_phage	27.2	8.6e-60
AUK53445.1|677037_678222_+	translation elongation factor Tu	NA	A0A2K9L516	Tupanvirus	25.3	8.3e-12
AUK53446.1|678480_678891_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AUK53447.1|678892_679444_+	transcription termination/antitermination protein NusG	NA	A0A291AUS6	Sinorhizobium_phage	28.5	4.7e-10
AUK53448.1|679602_680031_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
AUK53449.1|680035_680725_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
AUK53450.1|680791_681937_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	40.5	5.9e-47
>prophage 54
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	685063	701845	2333691		Chrysochromulina_ericina_virus(20.0%)	11	NA	NA
AUK53454.1|685063_689092_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	29.3	1.4e-21
AUK53455.1|689202_693456_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	26.7	2.4e-69
AUK53456.1|693598_694393_+	NADH pyrophosphatase	NA	NA	NA	NA	NA
AUK53457.1|694389_695454_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
AUK53458.1|695468_696059_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53459.1|696210_696483_+	DNA-binding protein	NA	A7KV42	Bacillus_phage	60.0	1.2e-19
AUK53460.1|696686_698519_+	glutamine--fructose-6-phosphate aminotransferase	NA	M1HVL7	Paramecium_bursaria_Chlorella_virus	42.8	8.9e-130
AUK53461.1|698777_698945_-	alkaline phosphatase	NA	NA	NA	NA	NA
AUK53462.1|699251_700085_-	DL-methionine transporter substrate-binding subunit	NA	NA	NA	NA	NA
AUK53463.1|700128_700818_-	methionine ABC transporter permease	NA	NA	NA	NA	NA
AUK53464.1|700810_701845_-	D-methionine ABC transporter, ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.2	6.3e-32
>prophage 55
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	708456	750602	2333691	integrase,head,tail,coat,terminase	Mannheimia_phage(43.9%)	61	708365:708418	757198:757251
708365:708418	attL	CGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGCCTCTCCGCCCCTGCCATTATT	NA	NA	NA	NA
AUK53466.1|708456_709422_-|integrase	integrase	integrase	G8C7S0	Escherichia_phage	35.8	3.7e-50
AUK53467.1|709418_709751_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53468.1|709940_710618_-	hypothetical protein	NA	B6SD63	Bacteriophage	49.6	6.2e-28
AUK53469.1|710872_711361_-	hypothetical protein	NA	A0A0M3LS47	Mannheimia_phage	51.2	3.2e-34
AUK53470.1|711572_711938_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53471.1|711934_712534_-	hypothetical protein	NA	A0A218KC93	Bacillus_phage	34.8	1.4e-18
AUK53472.1|712586_713375_-	hypothetical protein	NA	C5IHK3	Burkholderia_virus	29.2	3.2e-20
AUK53473.1|713866_714295_-	single-stranded DNA-binding protein	NA	A0A2I7RK19	Vibrio_phage	67.0	2.5e-35
AUK53474.1|714305_715007_-	single-stranded DNA-binding protein	NA	A0A0A7RVW0	Clostridium_phage	42.6	4.2e-19
AUK53475.1|715049_715694_-	ribonuclease H	NA	R9ZX90	Cellulophaga_phage	25.9	8.0e-09
AUK53476.1|716041_716278_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53477.1|716249_716549_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53478.1|716615_716927_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53479.1|716988_717630_-	antirepressor	NA	Q7Y5V4	Haemophilus_phage	65.0	1.0e-35
AUK53480.1|717915_718752_-	DNA-binding protein	NA	Q4ZC41	Staphylococcus_virus	51.4	1.3e-72
AUK53481.1|718862_719240_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53482.1|719214_719406_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53483.1|720002_720230_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53484.1|720738_721563_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53485.1|721559_722297_-	toxin HipA	NA	NA	NA	NA	NA
AUK53486.1|722372_723059_-	transcriptional regulator	NA	Q7Y5W5	Haemophilus_phage	58.4	4.6e-71
AUK53487.1|723186_723396_+	transcriptional regulator	NA	A0A077K9X2	Edwardsiella_phage	52.3	5.5e-12
AUK53488.1|723444_723897_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53489.1|723948_724632_+	antirepressor	NA	D0UIL6	Aggregatibacter_phage	67.9	9.5e-77
AUK53490.1|724628_724982_+	hypothetical protein	NA	A0A1C9LVX4	Vibrio_phage	33.6	1.3e-08
AUK53491.1|724983_725886_+	hypothetical protein	NA	A0A0U4JX08	Bacillus_phage	37.7	5.5e-32
AUK53492.1|725885_726581_+	replication protein P	NA	D0UIL4	Aggregatibacter_phage	32.6	2.8e-31
AUK53493.1|726573_727104_+	DNA methyltransferase	NA	A0A0M3LPV8	Mannheimia_phage	81.7	3.2e-88
AUK54921.1|727112_727550_+	hypothetical protein	NA	A0A0M3LR84	Mannheimia_phage	73.1	1.7e-58
AUK53494.1|727709_727925_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53495.1|727917_728520_+	recombinase NinG	NA	H6WRY9	Salmonella_phage	38.2	6.3e-32
AUK53496.1|728519_728885_+	hypothetical protein	NA	A0A0M3LR87	Mannheimia_phage	28.2	9.1e-10
AUK53497.1|728960_729536_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53498.1|729823_730441_+	DNA-binding protein	NA	S5FM84	Shigella_phage	42.6	1.3e-13
AUK53499.1|730649_730865_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54922.1|731248_731500_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53500.1|731496_732027_+	glycoside hydrolase	NA	A0A0M3LPQ1	Mannheimia_phage	48.0	3.6e-39
AUK54923.1|732279_732510_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53501.1|732544_732979_-	CopG family transcriptional regulator	NA	A0A0R6PJ17	Moraxella_phage	38.7	1.6e-21
AUK53502.1|733272_733770_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	70.7	7.4e-47
AUK53503.1|733753_734989_+|terminase	terminase	terminase	A0A0M3LTA2	Mannheimia_phage	77.9	8.8e-190
AUK53504.1|734998_736402_+	hypothetical protein	NA	A0A0M3LQA1	Mannheimia_phage	60.0	1.8e-154
AUK54924.1|736391_737993_+|head	phage head morphogenesis protein	head	A0A0M3LQ07	Mannheimia_phage	52.1	4.7e-151
AUK53505.1|737995_738214_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53506.1|738188_738623_+	guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	D0UIJ3	Aggregatibacter_phage	60.1	7.7e-40
AUK53507.1|738659_739058_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53508.1|739233_740019_+	hypothetical protein	NA	A0A1V0DY60	Dinoroseobacter_phage	36.5	1.1e-25
AUK53509.1|740036_741194_+|coat	P22 coat - protein 5 family protein	coat	G8C7P7	Escherichia_phage	43.6	1.3e-81
AUK53510.1|741250_741487_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53511.1|741503_741971_+	hypothetical protein	NA	A0A0M3LSP7	Mannheimia_phage	55.0	6.8e-34
AUK53512.1|741972_742347_+	hypothetical protein	NA	A0A0M3LT14	Mannheimia_phage	46.3	5.8e-28
AUK53513.1|742348_742750_+	hypothetical protein	NA	A0A0M3LPJ5	Mannheimia_phage	61.4	3.0e-38
AUK53514.1|742749_743145_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53515.1|743157_744174_+	hypothetical protein	NA	A0A0M3LQ19	Mannheimia_phage	72.8	4.0e-140
AUK53516.1|744247_744652_+	hypothetical protein	NA	A0A0M3LPJ3	Mannheimia_phage	56.7	3.7e-36
AUK53517.1|744660_744990_+	hypothetical protein	NA	A0A0M3LQT0	Mannheimia_phage	62.5	4.6e-29
AUK53518.1|744997_745324_+|tail	phage tail protein	tail	A0A1W6JNT2	Morganella_phage	37.6	1.2e-16
AUK53519.1|745341_748590_+|tail	phage tail protein	tail	A0A0M3LS69	Mannheimia_phage	35.4	2.9e-91
AUK53520.1|748586_749291_+|tail	phage minor tail protein L	tail	A0A0M3LPR8	Mannheimia_phage	63.9	7.7e-82
AUK53521.1|749295_750039_+|tail	phage tail protein	tail	A0A0M3LQI5	Mannheimia_phage	59.6	7.4e-83
AUK54925.1|749981_750602_+|tail	phage tail protein	tail	A0A0M3LQC4	Mannheimia_phage	57.4	1.1e-52
757198:757251	attR	CGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGCCTCTCCGCCCCTGCCATTATT	NA	NA	NA	NA
>prophage 56
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	764046	772488	2333691		Bodo_saltans_virus(25.0%)	6	NA	NA
AUK53530.1|764046_765021_+	23S rRNA pseudouridine(1911/1915/1917) synthase	NA	A0A2H4UV25	Bodo_saltans_virus	25.8	5.6e-06
AUK53531.1|765032_765767_+	multi-copper polyphenol oxidoreductase	NA	NA	NA	NA	NA
AUK53532.1|765850_768409_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	A0A2L1IV18	Escherichia_phage	28.9	1.8e-43
AUK53533.1|768605_770627_+	DNA ligase (NAD(+)) LigA	NA	A0A289ZTZ3	Serratia_phage	50.5	8.6e-142
AUK53534.1|770719_771601_-	N-acetylneuraminate lyase	NA	NA	NA	NA	NA
AUK53535.1|771621_772488_-	N-acetylmannosamine kinase	NA	A0A2P0VNK5	Tetraselmis_virus	25.0	1.5e-05
>prophage 57
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	778682	787017	2333691		Skunkpox_virus(33.33%)	7	NA	NA
AUK53541.1|778682_779825_+	N-acetylneuraminic acid mutarotase	NA	A0A1C9KBW8	Skunkpox_virus	29.5	5.0e-06
AUK53542.1|779916_780645_-	cytochrome C biogenesis protein	NA	NA	NA	NA	NA
AUK53543.1|780660_781035_-	thiol reductase thioredoxin	NA	NA	NA	NA	NA
AUK53544.1|781191_783759_-	ATP-dependent chaperone ClpB	NA	K4FB40	Cronobacter_phage	38.3	2.4e-125
AUK53545.1|784037_784862_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
AUK53546.1|785389_786088_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53547.1|786129_787017_+	tyrosine recombinase XerC	NA	S5W9T9	Leptospira_phage	26.0	1.6e-15
>prophage 58
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	792284	801514	2333691		Lactococcus_phage(33.33%)	10	NA	NA
AUK53555.1|792284_793232_+	cysteine synthase A	NA	A0A1W6JHY1	Lactococcus_phage	49.7	1.8e-65
AUK53556.1|793307_794333_-	delta-aminolevulinic acid dehydratase	NA	NA	NA	NA	NA
AUK53557.1|794404_795142_-	twin arginine-targeting protein translocase TatC	NA	NA	NA	NA	NA
AUK53558.1|795141_795717_-	twin arginine-targeting protein translocase TatB	NA	NA	NA	NA	NA
AUK53559.1|795716_795947_-	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
AUK53560.1|796055_797639_-	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	M4R0M8	Ostreococcus_lucimarinus_virus	28.9	2.6e-37
AUK53561.1|797656_798289_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54926.1|798623_799397_-	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase	NA	NA	NA	NA	NA
AUK53562.1|799504_800206_-	quercetin 2,3-dioxygenase	NA	NA	NA	NA	NA
AUK53563.1|800332_801514_-	Na(+)/H(+) antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	49.7	1.3e-89
>prophage 59
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	813498	816541	2333691		Erwinia_phage(50.0%)	3	NA	NA
AUK53574.1|813498_814128_-	dTMP kinase	NA	W8D0J5	Erwinia_phage	38.1	3.5e-25
AUK53575.1|814129_815176_-	cell division protein YceG	NA	NA	NA	NA	NA
AUK53576.1|815308_816541_-	D-3-phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	49.1	7.9e-106
>prophage 60
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	822459	825258	2333691	tRNA	Bandra_megavirus(100.0%)	1	NA	NA
AUK53585.1|822459_825258_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2K9V7W4	Bandra_megavirus	26.8	8.1e-90
>prophage 61
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	844881	854072	2333691	tRNA	Cyanophage(20.0%)	8	NA	NA
AUK53607.1|844881_845832_+	transaldolase	NA	A0A127KNC6	Cyanophage	26.5	8.2e-10
AUK53608.1|845859_847866_+	transketolase	NA	NA	NA	NA	NA
AUK53609.1|847961_849830_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.8	4.5e-36
AUK53610.1|849905_851654_-	DNA primase	NA	A0A1S5RF71	Helicobacter_phage	32.6	1.1e-41
AUK53611.1|851769_851985_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AUK53612.1|852203_853235_+|tRNA	tRNA N6-adenosine(37)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.6	1.1e-111
AUK53613.1|853255_853492_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53614.1|853493_854072_+	thymidine kinase	NA	A0A1Z1LZ42	Serratia_phage	52.1	2.4e-52
>prophage 62
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	867720	868626	2333691		Vibrio_phage(100.0%)	1	NA	NA
AUK53628.1|867720_868626_+	DNA adenine methylase	NA	A0A1S6L1V5	Vibrio_phage	48.9	1.8e-62
>prophage 63
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	874745	877328	2333691	tRNA	Staphylococcus_phage(100.0%)	1	NA	NA
AUK53636.1|874745_877328_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	41.9	4.5e-188
>prophage 64
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	881932	885770	2333691	integrase	Mannheimia_phage(50.0%)	5	879852:879866	888441:888455
879852:879866	attL	AAGTGCGGTGCTTTT	NA	NA	NA	NA
AUK54927.1|881932_882931_+|integrase	integrase	integrase	Q19US1	Mannheimia_phage	60.7	9.9e-107
AUK53639.1|883075_883381_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53640.1|883390_883744_-	MerT	NA	NA	NA	NA	NA
AUK53641.1|883715_884822_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53642.1|884942_885770_-	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA	A0A0A0YRJ8	Escherichia_phage	46.2	2.3e-08
888441:888455	attR	AAGTGCGGTGCTTTT	NA	NA	NA	NA
>prophage 65
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	890418	891168	2333691		Bodo_saltans_virus(100.0%)	1	NA	NA
AUK53649.1|890418_891168_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	A0A2H4UVM0	Bodo_saltans_virus	25.1	1.4e-09
>prophage 66
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	897377	900203	2333691		Brazilian_cedratvirus(50.0%)	4	NA	NA
AUK53656.1|897377_898001_-	chloramphenicol acetyltransferase	NA	A0A2R8FE91	Brazilian_cedratvirus	47.1	2.0e-28
AUK53657.1|898025_898280_-	recombinase RecA	NA	NA	NA	NA	NA
AUK53658.1|898284_899184_-	ATP phosphoribosyltransferase	NA	NA	NA	NA	NA
AUK53659.1|899447_900203_-	hypothetical protein	NA	A0A1X9I669	Streptococcus_phage	25.7	4.8e-05
>prophage 67
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	903405	903933	2333691		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
AUK53661.1|903405_903933_+	inorganic pyrophosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	66.3	1.6e-60
>prophage 68
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	914078	914714	2333691		Enterobacteria_phage(100.0%)	1	NA	NA
AUK53671.1|914078_914714_+	repressor LexA	NA	A5LH73	Enterobacteria_phage	43.2	1.4e-10
>prophage 69
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	919664	921515	2333691		Streptococcus_phage(100.0%)	1	NA	NA
AUK53679.1|919664_921515_+	GTP-binding protein TypA	NA	A0A1B0RXH7	Streptococcus_phage	41.4	1.5e-20
>prophage 70
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	930076	933606	2333691		Staphylococcus_phage(50.0%)	5	NA	NA
AUK53688.1|930076_930337_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	55.3	5.5e-17
AUK53689.1|930300_930660_-	ribonuclease P protein component	NA	NA	NA	NA	NA
AUK53690.1|930677_930812_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
AUK53691.1|931136_932492_+	chromosomal replication initiation protein DnaA	NA	NA	NA	NA	NA
AUK53692.1|932505_933606_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	31.7	8.2e-46
>prophage 71
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	937116	945268	2333691		Xanthomonas_phage(20.0%)	11	NA	NA
AUK53698.1|937116_937572_-	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA	Q2NP83	Xanthomonas_phage	59.5	4.0e-47
AUK53699.1|937587_938790_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase	NA	Q9HH70	Methanothermobacter_phage	29.5	7.9e-34
AUK53700.1|938968_939643_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53701.1|939884_940121_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
AUK53702.1|940132_940303_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
AUK53703.1|940370_941183_+	DNA-formamidopyrimidine glycosylase	NA	A0A127AWE5	Bacillus_phage	29.9	4.7e-22
AUK53704.1|941185_942217_-	heptosyltransferase	NA	NA	NA	NA	NA
AUK53705.1|942219_942888_-	beta-1,4-galactosyltransferase	NA	A0A1V0SJT4	Klosneuvirus	27.0	1.3e-09
AUK53706.1|942950_943163_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
AUK53707.1|943382_944225_+	beta-1,4 galactosyltransferase	NA	NA	NA	NA	NA
AUK53708.1|944254_945268_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	35.8	4.9e-13
>prophage 72
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	953053	957705	2333691		Leptospira_phage(50.0%)	3	NA	NA
AUK53716.1|953053_956152_+	transporter	NA	S5VTK5	Leptospira_phage	23.5	3.7e-59
AUK53717.1|956210_957275_-	AI-2E family transporter	NA	NA	NA	NA	NA
AUK53718.1|957354_957705_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	35.1	2.2e-13
>prophage 73
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	964461	1067824	2333691	integrase,transposase,tRNA,tail,portal,terminase	Mannheimia_phage(32.0%)	106	966023:966068	1007753:1007798
AUK53726.1|964461_965904_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
966023:966068	attL	CATGGCATGCAAGAGGTCGTCGGTTCGATCCCGATTATCTCCACCA	NA	NA	NA	NA
AUK53727.1|966172_967345_-|integrase	integrase	integrase	A0A059VF45	Pseudomonas_phage	52.9	1.0e-110
AUK53728.1|967720_968206_-	hypothetical protein	NA	A0A0M3LQA6	Mannheimia_phage	40.2	1.2e-20
AUK53729.1|968291_968591_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53730.1|968600_969134_-	hypothetical protein	NA	A0A0M3LS47	Mannheimia_phage	36.6	1.3e-20
AUK53731.1|969268_969868_-	hypothetical protein	NA	A0A218KC93	Bacillus_phage	37.6	4.6e-19
AUK53732.1|969918_970707_-	hypothetical protein	NA	C5IHK3	Burkholderia_virus	29.2	3.2e-20
AUK53733.1|970778_971132_-	hypothetical protein	NA	I6XKT1	Burkholderia_virus	31.8	1.7e-05
AUK53734.1|971174_971366_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53735.1|971377_971842_-	single-stranded DNA-binding protein	NA	A0A2I7RK19	Vibrio_phage	69.0	6.1e-35
AUK53736.1|971845_972457_-	exonuclease	NA	A0A0M3LPU0	Mannheimia_phage	76.4	2.8e-88
AUK53737.1|972449_973301_-	phage recombination protein Bet	NA	A0A2H4JAQ4	uncultured_Caudovirales_phage	63.9	4.8e-62
AUK53738.1|973304_974291_-	hypothetical protein	NA	A0A0M3LR66	Mannheimia_phage	40.2	3.4e-51
AUK53739.1|974467_974704_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53740.1|974675_974975_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53741.1|975041_975353_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53742.1|976562_977096_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53743.1|977183_977447_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53744.1|977671_977902_-	hypothetical protein	NA	A0A0M3LNV4	Mannheimia_phage	52.8	3.4e-10
AUK53745.1|978504_978888_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53746.1|978884_979364_-	HicB	NA	K7PJX6	Enterobacterial_phage	47.1	8.3e-19
AUK53747.1|979366_979630_-	hexulose-6-phosphate synthase	NA	NA	NA	NA	NA
AUK53748.1|979831_980491_-	DNA-binding protein	NA	A0A0M3LSL8	Mannheimia_phage	40.1	3.0e-35
AUK53749.1|980592_980781_+	hypothetical protein	NA	A5VW97	Enterobacteria_phage	55.9	6.1e-10
AUK53750.1|980829_981279_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53751.1|981336_981597_+	hypothetical protein	NA	D0UIL6	Aggregatibacter_phage	70.8	6.5e-18
AUK53752.1|981681_982500_+	DNA replication protein	NA	Q7Y5W1	Haemophilus_phage	58.2	5.6e-76
AUK53753.1|982496_983861_+	DNA helicase	NA	A0A0M3LQC0	Mannheimia_phage	51.9	2.6e-126
AUK54928.1|983863_984394_+	phage N-6-adenine-methyltransferase	NA	A0A0M3LNW2	Mannheimia_phage	58.9	1.0e-54
AUK53754.1|984383_984842_+	NinB protein	NA	Q7Y5V7	Haemophilus_phage	53.4	3.4e-38
AUK53755.1|984915_985128_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53756.1|985215_985818_+	recombinase NinG	NA	H6WRY9	Salmonella_phage	38.2	6.3e-32
AUK53757.1|985817_986183_+	hypothetical protein	NA	A0A0M3LR87	Mannheimia_phage	27.3	3.5e-09
AUK53758.1|986391_986607_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54929.1|986990_987281_+	hypothetical protein	NA	A0A0M3LR95	Mannheimia_phage	71.4	6.3e-14
AUK53759.1|987277_987808_+	glycoside hydrolase	NA	A0A0M3LPQ1	Mannheimia_phage	51.4	2.6e-45
AUK54930.1|988060_988291_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53760.1|988328_988745_-	antitoxin	NA	A0A0R6PD76	Moraxella_phage	52.9	1.0e-33
AUK53761.1|988792_988969_-	mRNA interferase	NA	A0A0M3LQ86	Mannheimia_phage	65.5	2.9e-14
AUK53762.1|989230_989707_+|terminase	terminase	terminase	K7PJY2	Enterobacterial_phage	54.3	3.2e-39
AUK53763.1|989709_991818_+	DNA packaging protein	NA	K7PH52	Enterobacterial_phage	67.0	2.8e-268
AUK54931.1|991814_992036_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53764.1|992032_993571_+|portal	phage portal protein	portal	K7PJP3	Enterobacteria_phage	58.2	1.2e-156
AUK53765.1|993506_995513_+	peptidase S14	NA	A0A1W6JT88	Pseudomonas_phage	52.9	3.8e-190
AUK53766.1|995583_995910_+	hypothetical protein	NA	A5LH31	Enterobacteria_phage	38.9	7.9e-13
AUK53767.1|995902_996196_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53768.1|996195_996747_+|tail	phage tail protein	tail	K7PKQ5	Enterobacteria_phage	44.5	3.6e-26
AUK53769.1|996743_997151_+|tail	phage tail protein	tail	NA	NA	NA	NA
AUK53770.1|997147_997654_+|tail	phage tail protein	tail	K7P6G8	Enterobacteria_phage	52.4	3.1e-40
AUK53771.1|997659_998049_+|tail	phage tail protein	tail	NA	NA	NA	NA
AUK53772.1|998177_998372_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53773.1|998358_1000512_+	hypothetical protein	NA	A0A088FB58	Idiomarinaceae_phage	24.8	6.1e-21
AUK53774.1|1000511_1000859_+|tail	phage tail protein	tail	I6RSL7	Salmonella_phage	39.6	4.0e-15
AUK53775.1|1000946_1001660_+|tail	phage minor tail protein L	tail	A0A0M3LPR8	Mannheimia_phage	63.2	2.1e-82
AUK53776.1|1001662_1002403_+|tail	phage tail protein	tail	A0A0M3LQI5	Mannheimia_phage	60.0	3.9e-84
AUK54932.1|1002345_1002936_+|tail	phage tail protein	tail	A0A0M3LQC4	Mannheimia_phage	57.1	3.1e-52
AUK53777.1|1002939_1007037_+	host specificity protein	NA	A0A0M3LQG1	Mannheimia_phage	40.1	4.3e-233
AUK53778.1|1007084_1007408_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53779.1|1008082_1010227_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
1007753:1007798	attR	CATGGCATGCAAGAGGTCGTCGGTTCGATCCCGATTATCTCCACCA	NA	NA	NA	NA
AUK53780.1|1010310_1011207_+	lipoprotein NlpI-like protein	NA	NA	NA	NA	NA
AUK53781.1|1011314_1013147_+	DEAD/DEAH family ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.7	1.8e-53
AUK53782.1|1013246_1014095_-	ModD protein	NA	NA	NA	NA	NA
AUK53783.1|1014112_1014712_-	iron ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.5	9.7e-17
AUK53784.1|1014713_1015511_-	ABC transporter	NA	NA	NA	NA	NA
AUK53785.1|1016343_1017978_-	chaperonin GroL	NA	A0A2I7SAK5	Vibrio_phage	68.6	1.7e-188
AUK53786.1|1018073_1018364_-	co-chaperone GroES	NA	A0A221S322	uncultured_virus	40.0	4.5e-12
AUK53787.1|1018452_1018923_-	membrane protein FxsA	NA	NA	NA	NA	NA
AUK53788.1|1019053_1020625_-	aminobenzoyl-glutamate transporter	NA	NA	NA	NA	NA
AUK53789.1|1020953_1022372_+	aspartate ammonia-lyase	NA	NA	NA	NA	NA
AUK53790.1|1022507_1024577_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AUK53791.1|1024606_1024987_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53792.1|1025117_1025741_-	glutathione S-transferase	NA	NA	NA	NA	NA
AUK53793.1|1025758_1026022_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53794.1|1026052_1026955_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AUK53795.1|1027236_1028490_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53796.1|1028600_1029458_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
AUK53797.1|1029710_1030724_+	o-succinylbenzoate synthase	NA	NA	NA	NA	NA
AUK53798.1|1030794_1031241_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
AUK53799.1|1031395_1031857_+	acetyl-CoA carboxylase, biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AUK53800.1|1031958_1033305_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AUK53801.1|1033387_1033639_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53802.1|1033628_1035062_+	sodium/panthothenate symporter	NA	NA	NA	NA	NA
AUK53803.1|1035204_1036086_+	ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
AUK53804.1|1036362_1037367_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AUK53805.1|1037347_1037647_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AUK53806.1|1037871_1041765_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	53.4	1.7e-114
AUK53807.1|1042198_1042771_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53808.1|1042784_1044023_-	hypothetical protein	NA	A0A0R6PKN1	Moraxella_phage	25.6	1.0e-12
AUK53809.1|1045040_1046066_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53810.1|1046530_1048960_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AUK53811.1|1049105_1049843_-	ferrichrome ABC transporter ATP-binding protein	NA	M1HP82	Acanthocystis_turfacea_Chlorella_virus	32.5	1.5e-14
AUK53812.1|1049854_1050799_-	ABC transporter permease	NA	NA	NA	NA	NA
AUK53813.1|1050811_1051600_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUK53814.1|1051907_1052462_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53815.1|1052942_1054022_+	endonuclease	NA	NA	NA	NA	NA
AUK53816.1|1054111_1055767_-	alpha-D-phosphohexomutase	NA	A0A1X9I671	Streptococcus_phage	34.9	7.4e-83
AUK53817.1|1055984_1056539_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53818.1|1056686_1058444_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AUK53819.1|1058628_1060290_+	transporter	NA	NA	NA	NA	NA
AUK53820.1|1060337_1060628_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53821.1|1060872_1062183_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53822.1|1062245_1062788_+	cysteine methyltransferase	NA	M1PFU9	Streptococcus_phage	45.7	4.8e-23
AUK53823.1|1062797_1063466_+	DNA mismatch repair endonuclease MutH	NA	NA	NA	NA	NA
AUK53824.1|1063531_1064260_+	hypothetical protein	NA	A0A0R6PEZ3	Moraxella_phage	38.1	4.9e-31
AUK53825.1|1064441_1064906_+|transposase	transposase	transposase	A0A0A8WIU6	Clostridium_phage	36.1	2.3e-13
AUK53826.1|1065031_1067824_-	DNA polymerase I	NA	A0A142F1Q9	Bacillus_phage	33.8	8.4e-79
>prophage 74
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1073120	1075136	2333691		Bacillus_phage(100.0%)	1	NA	NA
AUK53832.1|1073120_1075136_+	ATP-dependent DNA helicase Rep	NA	A7KV33	Bacillus_phage	38.6	1.3e-113
>prophage 75
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1086962	1088081	2333691		Pseudomonas_phage(100.0%)	1	NA	NA
AUK53845.1|1086962_1088081_+	nucleoside triphosphate hydrolase	NA	A0A0S0MVD6	Pseudomonas_phage	45.2	1.2e-47
>prophage 76
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1098065	1101935	2333691		Organic_Lake_phycodnavirus(50.0%)	3	NA	NA
AUK53853.1|1098065_1099586_-	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	NA	F2Y2R6	Organic_Lake_phycodnavirus	28.4	1.4e-11
AUK53854.1|1099658_1100651_-	methyl-galactoside ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUK53855.1|1100930_1101935_-	DNA-binding transcriptional regulator GalS	NA	C6ZCU4	Enterobacteria_phage	28.8	6.8e-23
>prophage 77
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1108489	1118889	2333691		Enterobacteria_phage(16.67%)	11	NA	NA
AUK53862.1|1108489_1109527_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	50.7	3.5e-91
AUK53863.1|1109631_1110936_+	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	31.0	1.5e-30
AUK53864.1|1110945_1111365_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	49.6	8.0e-26
AUK53865.1|1111516_1112671_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	62.5	9.0e-128
AUK53866.1|1112725_1113235_+	SprT family protein	NA	NA	NA	NA	NA
AUK53867.1|1113298_1113892_+	acetylglucosamine transferase	NA	NA	NA	NA	NA
AUK53868.1|1114060_1115956_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.4	6.2e-118
AUK53869.1|1116027_1116372_+	arsenate reductase	NA	NA	NA	NA	NA
AUK53870.1|1116451_1117588_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AUK53871.1|1117584_1118271_+	peptidase M15	NA	NA	NA	NA	NA
AUK53872.1|1118280_1118889_+	ADP-ribose pyrophosphatase	NA	A0A1S6L1P8	Vibrio_phage	33.5	4.1e-23
>prophage 78
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1123810	1126943	2333691		Moumouvirus(50.0%)	2	NA	NA
AUK54933.1|1123810_1125751_-	capsular biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	27.8	1.3e-17
AUK53877.1|1125773_1126943_-	aminotransferase	NA	A0A2K9L470	Tupanvirus	46.4	9.8e-98
>prophage 79
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1130478	1133780	2333691		Klosneuvirus(50.0%)	3	NA	NA
AUK53882.1|1130478_1131609_-	UDP-N-acetylglucosamine 2-epimerase	NA	A0A1V0SJE0	Klosneuvirus	51.6	1.6e-105
AUK53883.1|1131621_1132743_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
AUK53884.1|1132745_1133780_-	UDP-glucose 4-epimerase	NA	A0A1V0SAI8	Catovirus	34.7	4.8e-40
>prophage 80
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1137414	1138689	2333691		uncultured_virus(100.0%)	1	NA	NA
AUK53888.1|1137414_1138689_-	Vi polysaccharide biosynthesis protein VipA/TviB	NA	A0A218MKK1	uncultured_virus	25.7	1.3e-13
>prophage 81
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1146042	1154304	2333691		Roseobacter_phage(25.0%)	6	NA	NA
AUK53892.1|1146042_1147431_+	nicotinate phosphoribosyltransferase	NA	A0A1B0V392	Roseobacter_phage	54.7	5.9e-134
AUK53893.1|1147924_1148698_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53894.1|1148786_1149914_+	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AUK53895.1|1149913_1151860_+	macrolide ABC transporter permease/ATP-binding protein MacB	NA	G9BWD6	Planktothrix_phage	39.9	2.2e-38
AUK53896.1|1152759_1153869_+	cystathionine gamma-synthase	NA	A0A1V0SL56	Klosneuvirus	25.3	5.8e-15
AUK54934.1|1153980_1154304_+	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	48.3	1.6e-18
>prophage 82
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1167467	1174193	2333691	tRNA	Tupanvirus(33.33%)	8	NA	NA
AUK53906.1|1167467_1169234_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L3L6	Tupanvirus	24.5	1.1e-12
AUK53907.1|1169297_1170083_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53908.1|1170093_1170612_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA	NA
AUK53909.1|1170598_1171339_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53910.1|1171424_1171835_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53911.1|1171916_1172489_+	crossover junction endodeoxyribonuclease RuvC	NA	G3MA90	Bacillus_virus	32.4	3.2e-09
AUK53912.1|1172552_1173167_+	Holliday junction DNA helicase RuvA	NA	NA	NA	NA	NA
AUK53913.1|1173185_1174193_+	Holliday junction DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	24.4	2.4e-07
>prophage 83
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1191260	1340271	2333691	plate,integrase,tail,head,transposase,tRNA,portal,capsid,terminase	Mannheimia_phage(23.75%)	152	1261856:1261873	1315876:1315893
AUK53932.1|1191260_1192310_-	ferric transporter ATP-binding subunit	NA	G3M9Y6	Bacillus_virus	38.6	1.1e-34
AUK53933.1|1193574_1194132_-	hypothetical protein	NA	F6MII3	Haemophilus_phage	44.5	3.5e-13
AUK53934.1|1194251_1194515_+	Nlp family transcriptional regulator	NA	F6MII4	Haemophilus_phage	85.1	1.5e-35
AUK53935.1|1194530_1196546_+|transposase	transposase	transposase	M4M9R2	Vibrio_phage	35.3	1.2e-90
AUK53936.1|1196572_1197490_+	DNA transposition protein	NA	A0A2I7S9C3	Vibrio_phage	43.4	2.3e-62
AUK53937.1|1197489_1197693_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53938.1|1197713_1197965_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53939.1|1197939_1198158_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53940.1|1198168_1198687_+	host-nuclease inhibitor protein Gam	NA	C9DGL8	Escherichia_phage	64.3	2.3e-54
AUK53941.1|1198764_1198956_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53942.1|1198973_1199189_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53943.1|1199197_1199899_+	hypothetical protein	NA	L7P7W8	Pseudomonas_phage	31.0	1.7e-17
AUK53944.1|1199966_1200473_+	hypothetical protein	NA	A0A0C4UQU3	Shigella_phage	31.2	1.9e-13
AUK53945.1|1200469_1201015_+	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	43.5	1.5e-37
AUK53946.1|1201011_1201389_+	transcriptional regulator	NA	Q6QIE8	Burkholderia_phage	46.6	3.3e-23
AUK53947.1|1201462_1201882_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53948.1|1201968_1202517_+	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	67.4	1.3e-71
AUK54935.1|1202668_1203025_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53949.1|1203008_1203239_+	hypothetical protein	NA	F6MIK0	Haemophilus_phage	70.7	3.3e-18
AUK53950.1|1203235_1203493_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53951.1|1203616_1203946_+	hypothetical protein	NA	A0A2I7S9E2	Vibrio_phage	33.8	7.9e-05
AUK53952.1|1203949_1204240_+	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	68.8	1.1e-26
AUK53953.1|1204262_1204829_+	hypothetical protein	NA	A0A2I7S9D1	Vibrio_phage	44.8	9.4e-38
AUK54936.1|1204912_1206382_+	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	61.9	4.2e-162
AUK53954.1|1206383_1207799_+	hypothetical protein	NA	Q6QIC0	Burkholderia_phage	45.8	6.9e-114
AUK53955.1|1207799_1209071_+|head	phage head morphogenesis protein	head	J9STS2	Pseudomonas_phage	49.1	2.5e-54
AUK53956.1|1209199_1209664_+	phage virion morphogenesis protein	NA	Q6QIB8	Burkholderia_phage	38.8	6.8e-10
AUK53957.1|1209914_1211018_+	peptidase	NA	A4JWJ9	Burkholderia_virus	42.0	4.6e-73
AUK53958.1|1211036_1211963_+	hypothetical protein	NA	A4JWK0	Burkholderia_virus	47.9	1.0e-73
AUK53959.1|1212028_1212346_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53960.1|1212345_1212780_+	hypothetical protein	NA	A4JWK2	Burkholderia_virus	37.8	4.0e-20
AUK53961.1|1212791_1213289_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53962.1|1213298_1214684_+|tail	phage tail protein	tail	A4JWK5	Burkholderia_virus	44.3	2.0e-97
AUK53963.1|1214694_1215213_+|tail	phage major tail tube protein	tail	A4JWK6	Burkholderia_virus	45.0	3.9e-38
AUK53964.1|1215305_1215575_+|tail	phage tail protein	tail	NA	NA	NA	NA
AUK53965.1|1215595_1215730_+|tail	phage tail protein	tail	NA	NA	NA	NA
AUK53966.1|1215745_1215979_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53967.1|1216013_1218362_+|tail	phage tail tape measure protein	tail	K4ICR4	Acidithiobacillus_phage	38.8	1.1e-71
AUK53968.1|1218361_1219294_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53969.1|1219274_1219505_+	hypothetical protein	NA	Q6QIA3	Burkholderia_phage	47.8	7.2e-13
AUK53970.1|1219497_1220562_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53971.1|1220548_1221118_+|plate	phage baseplate protein	plate	NA	NA	NA	NA
AUK53972.1|1221172_1221538_+|plate	phage baseplate protein	plate	NA	NA	NA	NA
AUK53973.1|1221537_1222644_+|plate	phage baseplate protein	plate	A4JWL6	Burkholderia_virus	36.4	3.6e-57
AUK53974.1|1222636_1223206_+|tail	phage tail protein	tail	A4JWL7	Burkholderia_virus	44.8	4.5e-40
AUK53975.1|1223236_1225693_+	hypothetical protein	NA	A0A1Y0SVL0	Pasteurella_phage	95.5	0.0e+00
AUK53976.1|1225753_1225933_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53977.1|1227449_1228484_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53978.1|1228496_1229519_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53979.1|1229542_1230580_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53980.1|1230834_1231485_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.6	2.0e-36
AUK53981.1|1231501_1232086_+	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	40.5	9.4e-25
AUK53982.1|1232087_1233302_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53983.1|1233305_1234520_+	sugar transporter	NA	NA	NA	NA	NA
AUK53984.1|1234767_1236507_+	C4-dicarboxylic acid transporter DauA	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	7.9e-35
AUK53985.1|1236528_1237191_+	2-dehydro-3-deoxyphosphogluconate aldolase	NA	NA	NA	NA	NA
AUK53986.1|1237279_1237918_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
AUK53987.1|1237968_1239348_-|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	34.6	2.5e-44
AUK53988.1|1239484_1239994_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AUK54937.1|1240138_1240594_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AUK53989.1|1240700_1241492_+	deoxyribonuclease	NA	NA	NA	NA	NA
AUK53990.1|1241530_1241773_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53991.1|1241797_1242274_-	anaerobic ribonucleotide reductase-activating protein	NA	H6WXC9	Vibrio_phage	61.7	2.5e-52
AUK53992.1|1242345_1244487_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A2I7QNQ7	Vibrio_phage	62.1	2.2e-257
AUK53993.1|1244789_1246196_-	cytochrome-c peroxidase	NA	NA	NA	NA	NA
AUK53994.1|1246385_1247684_-	adenylosuccinate synthase	NA	W5S5V7	Pithovirus	36.5	1.1e-70
AUK53995.1|1247863_1249216_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
AUK53996.1|1249350_1250613_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.3	4.9e-95
AUK53997.1|1250626_1251307_-	hypothetical protein	NA	NA	NA	NA	NA
AUK53998.1|1251438_1252254_+	hypothetical protein	NA	NA	NA	NA	NA
AUK53999.1|1252337_1253726_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AUK54000.1|1253719_1254859_-	peptidase	NA	NA	NA	NA	NA
AUK54001.1|1255140_1255632_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54002.1|1255767_1256769_-	fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	44.5	1.9e-73
AUK54003.1|1256914_1258288_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
AUK54004.1|1258756_1259854_+	murein transglycosylase A	NA	NA	NA	NA	NA
AUK54005.1|1259853_1260615_+|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	S4VW33	Pandoravirus	32.2	2.0e-14
AUK54006.1|1260761_1261856_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
1261856:1261873	attL	AAAAGTGCGGTCATTTTT	NA	NA	NA	NA
AUK54007.1|1261920_1263741_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	25.7	2.5e-47
AUK54008.1|1263993_1264125_+	entericidin EcnAB	NA	NA	NA	NA	NA
AUK54009.1|1264303_1265308_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AUK54010.1|1265555_1265948_+	peptide-methionine (R)-S-oxide reductase	NA	NA	NA	NA	NA
AUK54011.1|1266045_1266672_+	guanylate kinase	NA	A0A223FN12	Murmansk_poxvirus	32.4	3.8e-16
AUK54012.1|1266738_1267008_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
AUK54013.1|1267068_1269192_+	guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	38.9	2.6e-11
AUK54014.1|1269188_1271270_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
AUK54015.1|1271262_1271775_+	chorismate--pyruvate lyase	NA	NA	NA	NA	NA
AUK54016.1|1271771_1272581_+	glutamate racemase	NA	NA	NA	NA	NA
AUK54017.1|1278431_1279103_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54018.1|1279835_1280852_-|portal	phage portal protein	portal	Q19UT6	Mannheimia_phage	63.1	2.0e-123
AUK54019.1|1280859_1282644_-|terminase	terminase	terminase	A0A0M3LRV4	Mannheimia_phage	65.6	2.5e-225
AUK54020.1|1282793_1283645_+|capsid	capsid scaffolding protein	capsid	Q19UT4	Mannheimia_phage	51.8	5.9e-68
AUK54021.1|1283660_1284707_+|capsid	phage major capsid protein, P2 family	capsid	A0A0M3LPD2	Mannheimia_phage	55.7	2.1e-99
AUK54022.1|1284710_1285382_+|terminase	terminase	terminase	K4NX86	Burkholderia_phage	40.8	2.7e-31
AUK54023.1|1285483_1285990_+|head	phage head protein	head	A0A0M3LNL8	Mannheimia_phage	46.4	1.4e-32
AUK54024.1|1285989_1286193_+|tail	phage tail protein	tail	E5FFI3	Burkholderia_phage	42.6	4.9e-05
AUK54025.1|1286203_1286431_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54026.1|1286420_1286942_+	glycoside hydrolase	NA	A0A0M3LQY4	Mannheimia_phage	46.2	6.9e-35
AUK54027.1|1287191_1287446_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54028.1|1287449_1287662_+	molecular chaperone DnaK	NA	A0A0M3LS11	Mannheimia_phage	50.7	4.3e-12
AUK54029.1|1287658_1288153_+|tail	phage tail protein	tail	A0A077K8R3	Ralstonia_phage	45.9	4.2e-26
AUK54030.1|1288139_1288595_+	phage virion morphogenesis protein	NA	A0A2H4J927	uncultured_Caudovirales_phage	49.3	4.2e-28
AUK54031.1|1288609_1291381_+|tail	phage tail tape measure protein	tail	A0A2H4JE61	uncultured_Caudovirales_phage	34.2	1.0e-84
AUK54032.1|1291500_1292142_+|plate	baseplate assembly protein	plate	A0A0M3LPY9	Mannheimia_phage	55.8	2.6e-36
AUK54033.1|1292141_1292480_+|plate	baseplate assembly protein W	plate	F1BUP4	Erwinia_phage	45.7	2.7e-16
AUK54034.1|1292476_1293391_+|plate	baseplate assembly protein	plate	Q19UQ5	Mannheimia_phage	60.5	7.7e-98
AUK54035.1|1293380_1293917_+|tail	phage tail protein I	tail	Q19UQ4	Mannheimia_phage	51.7	1.1e-48
AUK54036.1|1293933_1296747_+	hypothetical protein	NA	A0A1Y0SVL0	Pasteurella_phage	95.4	0.0e+00
AUK54037.1|1297299_1298490_+|tail	phage tail protein	tail	A0A0F7LBW9	Escherichia_phage	53.9	3.0e-118
AUK54038.1|1298500_1299007_+|tail	phage major tail tube protein	tail	Q19UP8	Mannheimia_phage	60.1	1.2e-52
AUK54039.1|1299064_1299367_+|tail	phage tail protein	tail	Q19UP7	Mannheimia_phage	38.5	1.7e-09
AUK54040.1|1299575_1300013_+	oxidoreductase	NA	A0A0M3LQ18	Mannheimia_phage	52.4	1.2e-37
AUK54041.1|1300009_1301167_+|tail	phage tail protein	tail	R9QBT3	Mannheimia_phage	52.4	7.9e-108
AUK54042.1|1301626_1302157_-	hypothetical protein	NA	Q19UP0	Mannheimia_phage	43.5	3.0e-30
AUK54043.1|1302159_1302831_-	repressor	NA	Q76H56	Enterobacteria_phage	33.0	9.8e-26
AUK54044.1|1302980_1303196_+	Cro/Cl family transcriptional regulator	NA	A0A0N7C1T6	Escherichia_phage	55.9	6.3e-11
AUK54045.1|1303210_1303756_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54046.1|1303769_1304243_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54047.1|1304242_1304497_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54048.1|1304591_1304864_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54049.1|1304885_1305218_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54050.1|1305201_1305429_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54051.1|1305518_1305851_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AUK54052.1|1305850_1306348_+	hypothetical protein	NA	A0A0M3LPG0	Mannheimia_phage	35.3	4.9e-14
AUK54053.1|1306347_1308516_+	replication protein	NA	F1BUM9	Cronobacter_phage	42.8	5.1e-124
AUK54054.1|1308515_1308881_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54055.1|1308890_1309208_+	hypothetical protein	NA	A0A0M3LQ35	Mannheimia_phage	40.7	1.5e-13
AUK54056.1|1309229_1309706_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54057.1|1309702_1310701_-|integrase	integrase	integrase	Q19US1	Mannheimia_phage	49.5	2.9e-82
AUK54058.1|1311356_1311848_+	heme iron utilization protein	NA	NA	NA	NA	NA
AUK54059.1|1311863_1312379_+	heme utilization protein HutZ	NA	NA	NA	NA	NA
AUK54060.1|1312420_1315324_+	ligand-gated channel protein	NA	NA	NA	NA	NA
AUK54061.1|1315490_1315760_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
AUK54062.1|1315898_1317011_-	Fe-S-binding ATPase	NA	NA	NA	NA	NA
1315876:1315893	attR	AAAAGTGCGGTCATTTTT	NA	NA	NA	NA
AUK54063.1|1317192_1319241_+|tRNA	methionine--tRNA ligase	tRNA	H2EDI7	Moumouvirus	30.1	2.5e-48
AUK54064.1|1319374_1321534_+	23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase	NA	NA	NA	NA	NA
AUK54065.1|1321764_1323099_+	type I-F CRISPR-associated protein Csy1	NA	NA	NA	NA	NA
AUK54066.1|1323108_1324092_+	type I-F CRISPR-associated protein Csy2	NA	NA	NA	NA	NA
AUK54067.1|1324094_1325102_+	type I-F CRISPR-associated protein Csy3	NA	A0A2D0YYX4	Vibrio_phage	39.0	4.9e-45
AUK54068.1|1325104_1325665_+	type I-F CRISPR-associated endoribonuclease Cas6/Csy4	NA	NA	NA	NA	NA
AUK54069.1|1326243_1327224_+	subtype I-F CRISPR-associated endonuclease Cas1	NA	A0A2D0YFC9	Vibrio_phage	37.8	8.3e-50
AUK54070.1|1327204_1330525_+	type I-F CRISPR-associated helicase Cas3	NA	F1D4K0	Vibrio_phage	29.2	3.2e-61
AUK54071.1|1330582_1332439_+	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	31.8	1.4e-37
AUK54072.1|1332579_1333170_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54073.1|1333233_1334037_-	inositol monophosphatase	NA	NA	NA	NA	NA
AUK54074.1|1334250_1334967_+|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	tRNA	NA	NA	NA	NA
AUK54075.1|1335045_1335510_+	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
AUK54076.1|1335557_1336772_+	cysteine desulfurase IscS	NA	H7BUW1	unidentified_phage	36.9	2.3e-33
AUK54077.1|1337003_1337390_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.9	5.4e-53
AUK54078.1|1337459_1337783_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	48.6	8.0e-26
AUK54079.1|1337812_1338331_+	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
AUK54080.1|1338408_1340271_+	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.0	2.9e-104
>prophage 84
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1364873	1367877	2333691		Klosneuvirus(50.0%)	3	NA	NA
AUK54099.1|1364873_1366070_+	bifunctional succinylornithine transaminase/acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	7.3e-24
AUK54100.1|1366125_1366827_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54101.1|1366905_1367877_-	octaprenyl diphosphate synthase	NA	A0A1V0SE37	Indivirus	25.3	1.6e-08
>prophage 85
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1379533	1394087	2333691		Bacillus_virus(33.33%)	12	NA	NA
AUK54113.1|1379533_1380607_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	46.8	6.5e-88
AUK54114.1|1380671_1381532_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA	NA
AUK54115.1|1381541_1382306_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54116.1|1382311_1383268_+	lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	NA	NA	NA	NA	NA
AUK54117.1|1383502_1384045_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.8	7.9e-26
AUK54118.1|1384079_1386224_+	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	35.8	1.9e-46
AUK54119.1|1386277_1387603_-	sodium:proton antiporter	NA	A0A2H4J178	uncultured_Caudovirales_phage	41.6	5.1e-42
AUK54120.1|1387728_1388082_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54121.1|1388183_1388900_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54122.1|1388909_1389638_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54123.1|1389669_1391922_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	35.1	1.5e-86
AUK54940.1|1392188_1394087_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	35.6	1.1e-95
>prophage 86
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1405361	1406039	2333691		Planktothrix_phage(100.0%)	1	NA	NA
AUK54130.1|1405361_1406039_+	thiamine ABC transporter, ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.5	1.2e-23
>prophage 87
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1425934	1428912	2333691		Planktothrix_phage(50.0%)	4	NA	NA
AUK54149.1|1425934_1426828_-	iron ABC transporter permease	NA	G9BWD6	Planktothrix_phage	25.5	4.1e-11
AUK54150.1|1426827_1427709_-	iron-binding protein	NA	NA	NA	NA	NA
AUK54151.1|1427821_1428151_-	sulfur relay protein TusE	NA	NA	NA	NA	NA
AUK54152.1|1428249_1428912_-	BAX inhibitor protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	52.8	7.6e-31
>prophage 88
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1436273	1447009	2333691		Vibrio_phage(33.33%)	8	NA	NA
AUK54159.1|1436273_1438454_+	DNA helicase II	NA	A7KV33	Bacillus_phage	35.7	9.0e-113
AUK54160.1|1438614_1440018_+	replicative DNA helicase	NA	O80281	Escherichia_phage	66.8	1.3e-168
AUK54943.1|1440023_1441100_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	31.2	1.9e-34
AUK54944.1|1441190_1443128_-	glycosyl transferase family A	NA	A0A1V0SAH6	Catovirus	30.3	2.3e-19
AUK54161.1|1443415_1443625_+	proteinprecursor	NA	NA	NA	NA	NA
AUK54162.1|1444179_1445829_+	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
AUK54163.1|1445912_1446602_-	transcriptional regulator	NA	A0A2I7S9A5	Vibrio_phage	37.8	1.5e-13
AUK54164.1|1446799_1447009_+	transcriptional regulator	NA	A0A2I7S995	Vibrio_phage	55.4	7.2e-12
>prophage 89
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1452723	1454394	2333691		Tupanvirus(100.0%)	1	NA	NA
AUK54169.1|1452723_1454394_-	energy-dependent translational throttle protein EttA	NA	A0A2K9L3Z8	Tupanvirus	26.4	8.6e-39
>prophage 90
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1461097	1469861	2333691	protease	Bacillus_phage(60.0%)	8	NA	NA
AUK54175.1|1461097_1462393_-	phosphate regulon sensor histidine kinase PhoR	NA	W8CYF6	Bacillus_phage	31.3	4.7e-24
AUK54176.1|1462389_1463085_-	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	36.4	7.0e-35
AUK54177.1|1463211_1463991_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.8	2.4e-15
AUK54178.1|1464008_1464851_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
AUK54179.1|1464851_1465814_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AUK54180.1|1465875_1466910_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	42.1	8.2e-56
AUK54181.1|1467180_1467810_+	23S rRNA (uridine(2552)-2'-O)-methyltransferase	NA	NA	NA	NA	NA
AUK54182.1|1467941_1469861_+|protease	ATP-dependent metalloprotease	protease	H8ZJI5	Ostreococcus_tauri_virus	42.0	4.2e-114
>prophage 91
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1474726	1476643	2333691		Nitrincola_phage(50.0%)	4	NA	NA
AUK54189.1|1474726_1475116_-	deoxyribonuclease	NA	A0A023NGV8	Nitrincola_phage	50.4	1.8e-27
AUK54190.1|1475175_1475478_-	cytochrome C biogenesis protein CcsB	NA	NA	NA	NA	NA
AUK54191.1|1475481_1475982_-	thioredoxin	NA	NA	NA	NA	NA
AUK54192.1|1475947_1476643_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.8	6.0e-18
>prophage 92
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1484235	1488256	2333691		Pandoravirus(50.0%)	4	NA	NA
AUK54199.1|1484235_1485126_+	peroxidase	NA	S4VVJ7	Pandoravirus	31.8	9.9e-26
AUK54200.1|1485200_1487528_-	penicillin-binding protein 1B	NA	NA	NA	NA	NA
AUK54201.1|1487556_1487877_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54202.1|1487914_1488256_-	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	45.5	3.2e-25
>prophage 93
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1507942	1508881	2333691		Staphylococcus_phage(100.0%)	1	NA	NA
AUK54213.1|1507942_1508881_+	ABC transporter	NA	A0A2H4PQG7	Staphylococcus_phage	32.4	7.3e-19
>prophage 94
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1515338	1518809	2333691	tRNA	Vibrio_phage(50.0%)	5	NA	NA
AUK54219.1|1515338_1516178_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.6e-41
AUK54220.1|1516221_1517007_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54221.1|1517143_1517455_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA	NA
AUK54222.1|1517458_1518190_+|tRNA	tRNA pseudouridine(65) synthase TruC	tRNA	NA	NA	NA	NA
AUK54223.1|1518599_1518809_+	cold shock domain protein CspD	NA	Q9AZD3	Lactococcus_phage	51.6	3.6e-11
>prophage 95
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1534701	1540956	2333691		Moumouvirus(33.33%)	6	NA	NA
AUK54246.1|1534701_1535487_+	Lsg locus protein 4	NA	A0A2P1EL82	Moumouvirus	23.7	5.0e-05
AUK54247.1|1535496_1536684_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54248.1|1536683_1537568_+	glycosyltransferase	NA	NA	NA	NA	NA
AUK54249.1|1537567_1538368_+	amylovoran biosynthesis protein AmsE	NA	F2Y1U7	Organic_Lake_phycodnavirus	30.1	3.1e-18
AUK54250.1|1538378_1539473_+	lytic transglycosylase	NA	NA	NA	NA	NA
AUK54251.1|1539645_1540956_+	adenine permease PurP	NA	A0A0R6PHV4	Moraxella_phage	35.8	1.5e-62
>prophage 96
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1545067	1547041	2333691		Virus_Rctr197k(100.0%)	1	NA	NA
AUK54254.1|1545067_1547041_+	exodeoxyribonuclease V subunit alpha	NA	A0A1P8DII4	Virus_Rctr197k	24.6	9.3e-16
>prophage 97
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1550120	1552146	2333691	protease	Pseudomonas_phage(33.33%)	3	NA	NA
AUK54260.1|1550120_1550603_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	53.9	4.1e-26
AUK54261.1|1550665_1551211_-	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	NA	A0A140XBD6	Dickeya_phage	41.2	3.1e-22
AUK54262.1|1551210_1552146_-	arabinose-5-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	32.7	8.2e-39
>prophage 98
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1555343	1559787	2333691	tRNA	Escherichia_phage(50.0%)	4	NA	NA
AUK54265.1|1555343_1557023_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	77.1	2.4e-254
AUK54266.1|1557226_1558672_+	sodium:alanine symporter	NA	NA	NA	NA	NA
AUK54267.1|1558771_1559263_+	GCN5 family acetyltransferase	NA	NA	NA	NA	NA
AUK54268.1|1559247_1559787_+	hypothetical protein	NA	A0A023NGN6	Nitrincola_phage	31.8	8.2e-07
>prophage 99
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1563133	1565620	2333691		Escherichia_phage(100.0%)	1	NA	NA
AUK54272.1|1563133_1565620_-	trimethylamine N-oxide reductase I catalytic subunit	NA	A0A077SK27	Escherichia_phage	29.0	1.0e-75
>prophage 100
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1581161	1587613	2333691		Dickeya_phage(50.0%)	3	NA	NA
AUK54284.1|1581161_1583618_+	glycogen phosphorylase	NA	A0A140XAG6	Dickeya_phage	55.4	1.6e-20
AUK54285.1|1583723_1586363_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AUK54286.1|1586608_1587613_-	transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	33.9	2.2e-37
>prophage 101
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1590764	1603434	2333691	tRNA	Tupanvirus(16.67%)	13	NA	NA
AUK54290.1|1590764_1592498_-|tRNA	arginine--tRNA ligase	tRNA	A0A2K9L2F0	Tupanvirus	35.5	1.5e-86
AUK54291.1|1592584_1593175_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54292.1|1593176_1593482_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54293.1|1593509_1593974_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54294.1|1594138_1595221_+	peptide chain release factor 1	NA	W8EDB3	Pseudomonas_phage	40.5	1.8e-08
AUK54295.1|1595279_1596176_+	protein-(glutamine-N5) methyltransferase, release factor-specific	NA	NA	NA	NA	NA
AUK54296.1|1596181_1596976_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54297.1|1596989_1597844_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	40.1	1.7e-46
AUK54298.1|1598026_1598977_+	glycerate dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	29.2	4.5e-24
AUK54299.1|1599058_1600249_+	permease	NA	NA	NA	NA	NA
AUK54945.1|1600265_1600949_+	lipoprotein releasing system, ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.3	2.1e-36
AUK54300.1|1600949_1602203_+	lipoprotein transporter subunit LolE	NA	NA	NA	NA	NA
AUK54301.1|1602348_1603434_+	3-deoxy-7-phosphoheptulonate synthase	NA	A0A0B6VT43	Edwardsiella_phage	46.0	5.9e-81
>prophage 102
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1611847	1616380	2333691		Bacillus_phage(66.67%)	3	NA	NA
AUK54308.1|1611847_1613578_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	W8CYL7	Bacillus_phage	24.1	9.6e-17
AUK54309.1|1613577_1615341_-	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.9	8.3e-24
AUK54310.1|1615426_1616380_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	43.3	1.3e-60
>prophage 103
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1623569	1630542	2333691	protease	Acinetobacter_phage(75.0%)	6	NA	NA
AUK54317.1|1623569_1624979_-	bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase	NA	A0A0P0IR83	Acinetobacter_phage	36.8	6.8e-29
AUK54318.1|1625015_1626017_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	37.0	8.2e-53
AUK54319.1|1626184_1627069_+	permease	NA	NA	NA	NA	NA
AUK54320.1|1627085_1627673_-	anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	38.1	4.0e-31
AUK54321.1|1627683_1629234_-	anthranilate synthase component I	NA	NA	NA	NA	NA
AUK54322.1|1629480_1630542_+|protease	protease SohB	protease	A0A219YA27	Aeromonas_phage	23.3	2.3e-05
>prophage 104
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1642811	1644743	2333691	tRNA	Tupanvirus(100.0%)	1	NA	NA
AUK54330.1|1642811_1644743_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.6	6.7e-128
>prophage 105
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1647765	1656474	2333691	tRNA	Escherichia_phage(50.0%)	10	NA	NA
AUK54333.1|1647765_1649211_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	29.2	1.6e-12
AUK54334.1|1649361_1649955_+	cyclic nucleotide-binding protein	NA	NA	NA	NA	NA
AUK54335.1|1649967_1651101_+	anaerobic sulfatase maturase	NA	NA	NA	NA	NA
AUK54336.1|1651122_1651947_+	D-hexose-6-phosphate mutarotase	NA	NA	NA	NA	NA
AUK54337.1|1652147_1652612_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	34.2	6.6e-13
AUK54338.1|1653009_1653207_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
AUK54339.1|1653277_1653631_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
AUK54340.1|1654448_1654721_+	adhesin	NA	A0A2L1IV32	Escherichia_phage	61.7	4.7e-19
AUK54341.1|1654976_1655501_-	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA	NA
AUK54342.1|1655535_1656474_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	81.3	8.9e-126
>prophage 106
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1667798	1675938	2333691		Tupanvirus(33.33%)	5	NA	NA
AUK54351.1|1667798_1670405_-	DNA topoisomerase I	NA	A0A2K9L1Q2	Tupanvirus	33.9	6.0e-87
AUK54352.1|1670565_1671399_-	phosphatase	NA	NA	NA	NA	NA
AUK54353.1|1671485_1672505_-	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA	NA
AUK54354.1|1672657_1675267_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.9	3.5e-18
AUK54355.1|1675437_1675938_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	40.6	2.3e-19
>prophage 107
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1681109	1688952	2333691	tRNA	Streptococcus_phage(20.0%)	9	NA	NA
AUK54362.1|1681109_1682036_+	hypothetical protein	NA	A1IMD5	Streptococcus_phage	30.8	3.1e-30
AUK54363.1|1682055_1682541_-	endopeptidase	NA	S5MM68	Bacillus_phage	36.6	7.1e-10
AUK54364.1|1682622_1682919_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	4.6e-12
AUK54365.1|1682922_1685310_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AUK54366.1|1685332_1685812_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54367.1|1685822_1686806_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	36.4	1.6e-32
AUK54368.1|1686984_1687503_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54369.1|1687531_1688194_-	RNA pseudouridine synthase	NA	NA	NA	NA	NA
AUK54370.1|1688301_1688952_+	phosphoglycerate mutase	NA	A0A1X9IGJ2	Lactococcus_phage	32.7	4.4e-07
>prophage 108
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1696753	1701466	2333691	tRNA	Indivirus(50.0%)	3	NA	NA
AUK54379.1|1696753_1698157_+|tRNA	asparagine--tRNA ligase	tRNA	A0A1V0SDB6	Indivirus	38.2	8.2e-83
AUK54380.1|1698217_1700575_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
AUK54381.1|1700620_1701466_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	43.2	6.7e-48
>prophage 109
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1704915	1705530	2333691		Orpheovirus(100.0%)	1	NA	NA
AUK54386.1|1704915_1705530_-	riboflavin synthase subunit alpha	NA	A0A2I2L4R9	Orpheovirus	37.8	2.4e-26
>prophage 110
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1710359	1710569	2333691		Morganella_phage(100.0%)	1	NA	NA
AUK54390.1|1710359_1710569_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	57.1	1.4e-15
>prophage 111
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1722899	1727825	2333691		Skua_adenovirus(50.0%)	3	NA	NA
AUK54398.1|1722899_1725296_-	sialidase	NA	G9B6J5	Skua_adenovirus	25.8	2.2e-11
AUK54399.1|1725638_1726763_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
AUK54400.1|1726772_1727825_-	3-deoxy-7-phosphoheptulonate synthase	NA	A0A067ZJG7	Escherichia_phage	51.4	2.2e-88
>prophage 112
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1731819	1733703	2333691		Salinibacter_virus(100.0%)	1	NA	NA
AUK54406.1|1731819_1733703_-	signal peptide peptidase SppA	NA	A0A2I6UGK8	Salinibacter_virus	29.0	4.1e-13
>prophage 113
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1738035	1738695	2333691		Staphylococcus_phage(100.0%)	1	NA	NA
AUK54412.1|1738035_1738695_+	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	43.3	1.2e-41
>prophage 114
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1753276	1761513	2333691		Chrysochromulina_ericina_virus(25.0%)	7	NA	NA
AUK54946.1|1753276_1754080_-	exodeoxyribonuclease III	NA	A0A0N9QXX6	Chrysochromulina_ericina_virus	26.5	1.3e-13
AUK54425.1|1754326_1756288_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	40.6	9.3e-93
AUK54426.1|1756382_1757039_-	GTP cyclohydrolase I FolE	NA	I6XC45	Vibriophage	50.2	2.0e-52
AUK54427.1|1757281_1758502_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AUK54428.1|1758503_1759226_+	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA	NA
AUK54429.1|1759238_1759829_-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA	NA	NA	NA	NA
AUK54430.1|1759998_1761513_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	39.6	1.1e-85
>prophage 115
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1767595	1772634	2333691	tRNA	Staphylococcus_phage(50.0%)	4	NA	NA
AUK54436.1|1767595_1769284_-	long-chain-fatty-acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.1	2.5e-30
AUK54437.1|1769405_1769945_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54438.1|1769980_1770700_-|tRNA	tRNA N6-adenosine(37)-N6-threonylcarbamoyltransferase complex dimerization subunit TsaB	tRNA	NA	NA	NA	NA
AUK54439.1|1770705_1772634_-	ATP-dependent helicase	NA	A0A127AW80	Bacillus_phage	31.7	3.5e-92
>prophage 116
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1785992	1791569	2333691		Colwellia_phage(50.0%)	3	NA	NA
AUK54445.1|1785992_1788263_+	ribonucleoside-diphosphate reductase subunit alpha	NA	I3UMG3	Colwellia_phage	67.8	3.3e-307
AUK54446.1|1788575_1790084_+	transporter	NA	NA	NA	NA	NA
AUK54948.1|1790438_1791569_+	ribonucleotide-diphosphate reductase subunit beta	NA	G9IAA3	Pseudomonas_phage	78.6	5.4e-170
>prophage 117
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1802849	1818214	2333691		Staphylococcus_phage(20.0%)	12	NA	NA
AUK54458.1|1802849_1803323_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	46.7	3.0e-29
AUK54459.1|1803536_1804748_+	tyrosine transporter	NA	NA	NA	NA	NA
AUK54460.1|1804803_1805466_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
AUK54461.1|1805687_1807067_+	serine peptidase	NA	A0A1B1IT49	uncultured_Mediterranean_phage	31.1	1.0e-24
AUK54462.1|1807161_1808589_-	GTP-binding protein	NA	NA	NA	NA	NA
AUK54463.1|1808942_1810847_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	51.3	5.8e-148
AUK54464.1|1810971_1811370_+	transcriptional regulator	NA	NA	NA	NA	NA
AUK54465.1|1811443_1812712_+	O-acetylhomoserine aminocarboxypropyltransferase	NA	NA	NA	NA	NA
AUK54466.1|1812712_1813243_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54467.1|1813290_1814409_+	molecular chaperone DnaJ	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	35.8	1.2e-23
AUK54468.1|1814715_1817070_+	ligand-gated channel protein	NA	NA	NA	NA	NA
AUK54469.1|1817158_1818214_-	molybdenum ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.3	3.6e-22
>prophage 118
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1823942	1826717	2333691		Salmonella_phage(33.33%)	3	NA	NA
AUK54473.1|1823942_1824542_-	5'-deoxynucleotidase	NA	A0A2L0V156	Salmonella_phage	35.8	7.0e-07
AUK54474.1|1824561_1825590_-	outer membrane-stress sensor serine endopeptidase DegS	NA	A0A1B1IT49	uncultured_Mediterranean_phage	28.4	2.4e-15
AUK54475.1|1825586_1826717_-	riboflavin biosynthesis protein RibD	NA	A0A2H4PQS8	Staphylococcus_phage	36.4	1.0e-43
>prophage 119
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1840005	1845776	2333691		Bodo_saltans_virus(50.0%)	4	NA	NA
AUK54486.1|1840005_1842507_-	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	24.2	8.1e-25
AUK54487.1|1842522_1844007_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
AUK54488.1|1844024_1844480_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
AUK54489.1|1845029_1845776_-	transcriptional regulator	NA	A0A077SK06	Escherichia_phage	26.7	1.2e-13
>prophage 120
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1852693	1856605	2333691		Catovirus(100.0%)	1	NA	NA
AUK54950.1|1852693_1856605_-	ATP-dependent RNA helicase HrpA	NA	A0A1V0SBU4	Catovirus	28.0	6.5e-53
>prophage 121
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1866039	1868638	2333691		Only_Syngen_Nebraska_virus(50.0%)	2	NA	NA
AUK54502.1|1866039_1867212_+	UDP-glucose 6-dehydrogenase	NA	A0A1J0FA55	Only_Syngen_Nebraska_virus	57.6	7.7e-119
AUK54503.1|1867204_1868638_+	glycosyltransferase DcbB	NA	A0A1V0SAH6	Catovirus	38.1	2.5e-18
>prophage 122
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1871777	1872437	2333691		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
AUK54507.1|1871777_1872437_+	ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.0	2.5e-10
>prophage 123
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1893508	1893793	2333691		Burkholderia_virus(100.0%)	1	NA	NA
AUK54528.1|1893508_1893793_-	integration host factor subunit beta	NA	A4JWM7	Burkholderia_virus	38.9	6.0e-09
>prophage 124
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1911772	1922017	2333691	tRNA	Dickeya_phage(20.0%)	6	NA	NA
AUK54537.1|1911772_1913110_-	argininosuccinate synthase	NA	A0A140XAJ5	Dickeya_phage	77.8	9.9e-54
AUK54538.1|1913165_1914026_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AUK54539.1|1914097_1914958_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	37.3	4.6e-52
AUK54540.1|1916746_1918327_+	peptide chain release factor 3	NA	D0R0F5	Streptococcus_phage	25.8	2.0e-29
AUK54541.1|1918545_1919025_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	32.4	9.1e-18
AUK54542.1|1919152_1922017_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.7	1.3e-146
>prophage 125
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1928349	1928613	2333691		Vibrio_phage(100.0%)	1	NA	NA
AUK54551.1|1928349_1928613_+	glutaredoxin	NA	A0A2I7SAE2	Vibrio_phage	70.1	1.6e-24
>prophage 126
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1938218	1939301	2333691		Streptococcus_phage(100.0%)	1	NA	NA
AUK54559.1|1938218_1939301_+	phosphoserine transaminase	NA	M1Q1P2	Streptococcus_phage	44.8	1.3e-83
>prophage 127
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1942799	1945481	2333691		Bacillus_virus(100.0%)	1	NA	NA
AUK54563.1|1942799_1945481_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	32.5	1.8e-107
>prophage 128
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1963613	1970136	2333691		Bacillus_phage(33.33%)	4	NA	NA
AUK54581.1|1963613_1965362_-	lipid ABC transporter permease/ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.3	4.8e-56
AUK54582.1|1965414_1967622_-	DNA internalization-related competence protein ComEC/Rec2	NA	Q0H255	Geobacillus_phage	30.7	2.7e-24
AUK54583.1|1968104_1968542_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
AUK54584.1|1968630_1970136_+	poly(A) polymerase	NA	H7BUW3	unidentified_phage	33.2	9.9e-26
>prophage 129
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1974295	1976020	2333691		Yellowstone_lake_phycodnavirus(100.0%)	1	NA	NA
AUK54590.1|1974295_1976020_-	acetolactate synthase, large subunit, biosynthetic type	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.5	3.6e-56
>prophage 130
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	1983563	2063712	2333691	lysis,plate,head,tRNA,tail	Haemophilus_phage(39.13%)	85	NA	NA
AUK54597.1|1983563_1985513_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.0	3.0e-51
AUK54598.1|1985628_1986981_-	dGTPase	NA	NA	NA	NA	NA
AUK54957.1|1986982_1987678_-|lysis	CidB/LrgB family autolysis modulator	lysis	NA	NA	NA	NA
AUK54599.1|1987677_1988088_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54600.1|1988217_1988700_+	nuclease	NA	A0A0R6PHV6	Moraxella_phage	43.5	1.2e-28
AUK54601.1|1988701_1989901_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	32.8	6.0e-58
AUK54602.1|1989904_1990282_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54603.1|1990691_1992122_-	bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	27.2	1.2e-33
AUK54604.1|1992345_1993287_+	lipid A biosynthesis lauroyl acyltransferase	NA	A0A1W6JP29	Morganella_phage	38.8	2.2e-52
AUK54605.1|1993385_1993961_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54606.1|1993950_1994565_-	NAD(P)H oxidoreductase	NA	NA	NA	NA	NA
AUK54607.1|1994570_1995020_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54608.1|1995040_1995964_-	paraslipin	NA	NA	NA	NA	NA
AUK54609.1|1996008_1997460_-	molybdate ABC transporter ATP-binding protein ModF	NA	A0A2R8FG22	Brazilian_cedratvirus	27.1	3.1e-08
AUK54610.1|1997520_1998762_-	serine/threonine transporter SstT	NA	NA	NA	NA	NA
AUK54611.1|1999133_1999583_+	type VI secretion protein ImpA	NA	NA	NA	NA	NA
AUK54612.1|1999690_2001109_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.3	2.3e-40
AUK54613.1|2001233_2003132_-	pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
AUK54614.1|2003204_2005868_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
AUK54615.1|2006570_2007071_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
AUK54616.1|2007129_2008857_-	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	32.9	6.7e-18
AUK54617.1|2008940_2009198_-	PTS sugar transporter	NA	NA	NA	NA	NA
AUK54618.1|2009428_2010481_-	ribosome biogenesis GTPase RsgA	NA	NA	NA	NA	NA
AUK54619.1|2010563_2011118_+	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	41.8	2.2e-31
AUK54620.1|2011618_2012068_+|tRNA	tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE	tRNA	NA	NA	NA	NA
AUK54958.1|2012072_2013302_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A223LD43	Bacillus_phage	29.8	2.0e-08
AUK54621.1|2013307_2015161_+	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	42.7	2.6e-68
AUK54622.1|2015165_2016116_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AUK54623.1|2016245_2016536_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
AUK54624.1|2016543_2017890_+	GTPase HflX	NA	NA	NA	NA	NA
AUK54625.1|2017938_2018892_-	transcriptional regulator	NA	NA	NA	NA	NA
AUK54626.1|2018978_2020055_-	TIGR01620 family protein	NA	NA	NA	NA	NA
AUK54627.1|2020072_2021479_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54628.1|2021647_2023339_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUK54629.1|2023335_2024301_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
AUK54630.1|2024290_2025178_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
AUK54631.1|2025185_2026235_+	peptide ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AUK54632.1|2026794_2027634_-	hypothetical protein	NA	F6MIM2	Haemophilus_phage	70.2	1.6e-113
AUK54633.1|2027963_2028152_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54634.1|2028212_2030741_-	hypothetical protein	NA	A0A1Y0SVL0	Pasteurella_phage	94.8	0.0e+00
AUK54959.1|2030744_2031329_-	hypothetical protein	NA	F6MIL7	Haemophilus_phage	69.3	9.3e-73
AUK54635.1|2031331_2032396_-|plate	baseplate J protein	plate	F6MIL6	Haemophilus_phage	64.0	6.1e-123
AUK54636.1|2032410_2032761_-	hypothetical protein	NA	A0A0M3LQK5	Mannheimia_phage	77.6	7.6e-46
AUK54637.1|2032836_2033493_-|plate	baseplate assembly protein	plate	A0A0M3LPA3	Mannheimia_phage	61.5	2.3e-67
AUK54960.1|2033495_2034608_-|tail	phage tail protein	tail	F6MIL3	Haemophilus_phage	70.3	5.2e-141
AUK54638.1|2034609_2035935_-	phage morphogenesis protein	NA	F6MIL2	Haemophilus_phage	45.0	3.3e-110
AUK54639.1|2035937_2038193_-|tail	phage tail tape measure protein	tail	A0A0M3LPB6	Mannheimia_phage	45.8	4.5e-139
AUK54640.1|2038240_2038420_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54641.1|2038476_2038818_-	hypothetical protein	NA	A0A0M3LSI2	Mannheimia_phage	41.8	4.4e-14
AUK54642.1|2038817_2039186_-|tail	phage tail protein	tail	F6MIK8	Haemophilus_phage	53.2	1.8e-26
AUK54643.1|2039195_2040605_-|tail	phage tail protein	tail	A0A0M3LQC3	Mannheimia_phage	64.0	1.0e-157
AUK54644.1|2040771_2041185_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54645.1|2041188_2041830_-	hypothetical protein	NA	A0A0M3LQJ7	Mannheimia_phage	45.6	1.1e-47
AUK54646.1|2041813_2042236_-	hypothetical protein	NA	A0A0M3LP98	Mannheimia_phage	60.4	2.6e-40
AUK54961.1|2042238_2042550_-	hypothetical protein	NA	A0A0M3LPR6	Mannheimia_phage	56.7	2.6e-13
AUK54647.1|2042684_2043602_-|head	head protein	head	B7SDP1	Haemophilus_phage	71.0	4.8e-124
AUK54648.1|2043601_2044639_-	I protein	NA	B7SDN9	Haemophilus_phage	46.0	1.5e-65
AUK54649.1|2044881_2045298_-	phage virion morphogenesis protein	NA	A0A0M3LSP9	Mannheimia_phage	72.5	4.9e-52
AUK54650.1|2045438_2046740_-|head	phage head morphogenesis protein	head	B7SDN5	Haemophilus_phage	65.8	3.9e-164
AUK54651.1|2046732_2048373_-	hypothetical protein	NA	B7SDN1	Haemophilus_phage	67.7	6.0e-202
AUK54652.1|2048376_2050017_-	hypothetical protein	NA	B7SDN0	Haemophilus_phage	76.7	2.5e-248
AUK54653.1|2050120_2050621_-	DNA-binding protein	NA	F6MIK6	Haemophilus_phage	61.7	5.0e-51
AUK54654.1|2050624_2050876_-	hypothetical protein	NA	A0A0M3LP87	Mannheimia_phage	70.6	3.2e-06
AUK54655.1|2050872_2051127_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54656.1|2051240_2051498_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54657.1|2051494_2051731_-	hypothetical protein	NA	F6MIK0	Haemophilus_phage	72.7	3.4e-18
AUK54658.1|2051883_2052369_-	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	47.6	2.3e-37
AUK54659.1|2052459_2052888_-	mor transcription activator family protein	NA	F6MIJ8	Haemophilus_phage	48.9	1.6e-34
AUK54660.1|2053016_2053352_-	hypothetical protein	NA	A0A0M3LQH8	Mannheimia_phage	61.3	1.4e-28
AUK54962.1|2053388_2053793_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54661.1|2053839_2054220_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54662.1|2054212_2054686_-	hypothetical protein	NA	A0A2H4JFV8	uncultured_Caudovirales_phage	44.4	2.3e-29
AUK54663.1|2054761_2055244_-	hypothetical protein	NA	A0A0M3LS47	Mannheimia_phage	49.1	2.8e-30
AUK54664.1|2055287_2055563_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54665.1|2056284_2056521_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54666.1|2056529_2057078_-	phosphohydrolase	NA	A0A1W6JP41	Morganella_phage	42.9	1.8e-22
AUK54667.1|2057413_2057623_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54668.1|2057780_2058398_-	sulfate transporter	NA	A0A0M3LQ92	Mannheimia_phage	64.9	2.0e-73
AUK54669.1|2058400_2058589_-	hypothetical protein	NA	F6MII8	Haemophilus_phage	54.8	1.7e-12
AUK54670.1|2058597_2058807_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54671.1|2058823_2059144_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54672.1|2059157_2060033_-	transcriptional regulator	NA	A0A0M3LP72	Mannheimia_phage	57.9	2.9e-86
AUK54673.1|2060059_2060503_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54674.1|2062504_2062777_-	DNA-binding protein	NA	F6MII4	Haemophilus_phage	48.8	7.7e-14
AUK54675.1|2063001_2063712_+	transcriptional regulator	NA	F6MII3	Haemophilus_phage	52.7	5.4e-59
>prophage 131
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2067307	2068804	2333691		Tupanvirus(100.0%)	1	NA	NA
AUK54681.1|2067307_2068804_+	ribose ABC transporter ATP-binding protein RbsA	NA	A0A2K9L0W2	Tupanvirus	23.6	1.1e-19
>prophage 132
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2097476	2106957	2333691	protease	uncultured_Caudovirales_phage(20.0%)	12	NA	NA
AUK54707.1|2097476_2098469_+	iron-dicitrate transporter subunit FecD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	31.3	1.3e-21
AUK54708.1|2098468_2099242_+	iron ABC transporter	NA	W5SAS9	Pithovirus	25.7	1.3e-13
AUK54709.1|2099332_2099563_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54710.1|2099621_2100305_-	arginine transporter permease subunit ArtM	NA	NA	NA	NA	NA
AUK54711.1|2100304_2100976_-	ABC transporter	NA	NA	NA	NA	NA
AUK54712.1|2100982_2101705_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUK54713.1|2101721_2102453_-	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	35.6	9.6e-27
AUK54963.1|2102628_2103213_-	phosphoheptose isomerase	NA	NA	NA	NA	NA
AUK54714.1|2103245_2103785_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	30.6	3.7e-15
AUK54715.1|2104019_2105375_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
AUK54716.1|2105469_2106012_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54717.1|2106069_2106957_-|protease	protease modulator HflC	protease	A0A2I7S9Z3	Vibrio_phage	26.7	1.6e-07
>prophage 133
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2123645	2124940	2333691		Salmonella_phage(50.0%)	2	NA	NA
AUK54729.1|2123645_2124110_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	53.9	5.3e-47
AUK54730.1|2124178_2124940_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	42.3	3.7e-37
>prophage 134
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2134795	2138678	2333691		Salmonella_phage(50.0%)	4	NA	NA
AUK54740.1|2134795_2135704_-	recombination-associated protein RdgC	NA	S4TWL4	Salmonella_phage	50.3	5.5e-72
AUK54741.1|2135797_2136625_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
AUK54742.1|2136624_2137782_+	3-phenylpropionic acid transporter	NA	NA	NA	NA	NA
AUK54743.1|2137784_2138678_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.2	1.0e-33
>prophage 135
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2146149	2156538	2333691	tRNA	Agrobacterium_phage(25.0%)	9	NA	NA
AUK54753.1|2146149_2146716_+	N-acetyl-anhydromuranmyl-L-alanine amidase	NA	A0A223VZK2	Agrobacterium_phage	29.2	2.7e-08
AUK54754.1|2147301_2147898_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
AUK54755.1|2147900_2148695_+	hypothetical protein	NA	NA	NA	NA	NA
AUK54756.1|2148704_2149508_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
AUK54757.1|2149513_2150365_+	thymidylate synthase	NA	H9EB68	Vibrio_phage	77.4	4.0e-133
AUK54758.1|2150379_2150880_+|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
AUK54759.1|2151096_2151837_-	pyruvate formate-lyase 1-activating enzyme	NA	E5DI79	Enterobacter_phage	37.1	8.6e-07
AUK54760.1|2152000_2154040_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54761.1|2154213_2156538_-	formate acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	41.5	1.7e-157
>prophage 136
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2159633	2169344	2333691		Streptococcus_phage(33.33%)	10	NA	NA
AUK54766.1|2159633_2160824_+	23S rRNA (uracil(747)-C(5))-methyltransferase	NA	A0A1X9I6F4	Streptococcus_phage	24.7	6.8e-22
AUK54767.1|2160916_2161882_-	6-phosphofructokinase	NA	NA	NA	NA	NA
AUK54768.1|2161976_2162891_-	divalent metal cation transporter FieF	NA	NA	NA	NA	NA
AUK54769.1|2162891_2163458_-	hypothetical protein	NA	NA	NA	NA	NA
AUK54770.1|2163459_2164236_-	hypothetical protein	NA	A0A1X9I5I0	Streptococcus_phage	23.2	1.4e-15
AUK54771.1|2164263_2164932_-	uracil-DNA glycosylase	NA	A0A076JX67	Equid_alphaherpesvirus	46.5	4.2e-53
AUK54772.1|2165207_2165591_+	autonomous glycyl radical cofactor GrcA	NA	A0A2K9VG12	Escherichia_phage	69.0	4.9e-30
AUK54773.1|2165822_2167619_+	elongation factor 4	NA	A0A2K9L2P9	Tupanvirus	42.6	5.0e-24
AUK54774.1|2167637_2168660_+	S26 family signal peptidase	NA	NA	NA	NA	NA
AUK54775.1|2168666_2169344_+	ribonuclease III	NA	A0A2K9L5P0	Tupanvirus	32.6	3.0e-22
>prophage 137
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2203814	2204852	2333691		Bacillus_virus(100.0%)	1	NA	NA
AUK54786.1|2203814_2204852_+	ABC transporter	NA	G3M9Y6	Bacillus_virus	32.5	2.2e-24
>prophage 138
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2212918	2214613	2333691		Bacillus_virus(100.0%)	1	NA	NA
AUK54793.1|2212918_2214613_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.8	4.0e-07
>prophage 139
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2222534	2227638	2333691		Saccharomonospora_phage(50.0%)	2	NA	NA
AUK54800.1|2222534_2226014_-	DNA polymerase III subunit alpha	NA	Q8W6C3	Saccharomonospora_phage	36.2	7.2e-197
AUK54801.1|2226183_2227638_-	catalase	NA	A0A2K9L0T1	Tupanvirus	46.1	1.3e-96
>prophage 140
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2238775	2240454	2333691		Prochlorococcus_phage(50.0%)	2	NA	NA
AUK54812.1|2238775_2239813_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.8	2.3e-74
AUK54813.1|2239812_2240454_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.1	7.2e-26
>prophage 141
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2251048	2251690	2333691		Klosneuvirus(100.0%)	1	NA	NA
AUK54828.1|2251048_2251690_-	heme ABC transporter ATP-binding protein CcmA	NA	A0A1V0SKJ1	Klosneuvirus	26.0	6.3e-06
>prophage 142
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2260266	2261469	2333691		Salmonella_phage(100.0%)	1	NA	NA
AUK54836.1|2260266_2261469_-	Bcr/CflA family drug resistance efflux transporter	NA	S4TR35	Salmonella_phage	22.6	1.6e-18
>prophage 143
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2264803	2265448	2333691		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
AUK54839.1|2264803_2265448_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	55.6	1.2e-57
>prophage 144
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2278935	2281416	2333691		Oenococcus_phage(50.0%)	2	NA	NA
AUK54854.1|2278935_2280792_-	citrate transporter	NA	Q6A201	Oenococcus_phage	28.0	1.5e-12
AUK54855.1|2280822_2281416_-	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	40.8	1.2e-27
>prophage 145
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2290400	2292971	2333691	transposase	Flavobacterium_phage(50.0%)	3	NA	NA
AUK54863.1|2290400_2291123_-	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	45.2	1.1e-25
AUK54968.1|2291172_2292372_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
AUK54864.1|2292506_2292971_-|transposase	transposase	transposase	A0A0A8WIU6	Clostridium_phage	36.1	2.3e-13
>prophage 146
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2297711	2300444	2333691		Staphylococcus_phage(100.0%)	1	NA	NA
AUK54870.1|2297711_2300444_+	multidrug ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.4	3.9e-20
>prophage 147
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2305054	2312544	2333691	protease	Moraxella_phage(20.0%)	6	NA	NA
AUK54874.1|2305054_2307469_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.1e-220
AUK54875.1|2307593_2308829_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.5	9.9e-125
AUK54876.1|2308844_2309426_-	ATP-dependent Clp endopeptidase, proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	62.4	3.1e-60
AUK54877.1|2309590_2310889_-	trigger factor	NA	NA	NA	NA	NA
AUK54878.1|2311101_2311545_-	peptidoglycan-binding protein LysM	NA	J9QDY6	Clostridium_phage	44.3	1.4e-07
AUK54879.1|2311716_2312544_+	hypothetical protein	NA	A0A1I9SA48	Rhodococcus_phage	37.7	1.7e-32
>prophage 148
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2316524	2319788	2333691		Acanthocystis_turfacea_Chlorella_virus(50.0%)	3	NA	NA
AUK54886.1|2316524_2316908_+	2-deoxyglucose-6-phosphate hydrolase	NA	M1IMD4	Acanthocystis_turfacea_Chlorella_virus	40.0	2.1e-09
AUK54887.1|2316952_2317717_+	transcriptional regulator	NA	NA	NA	NA	NA
AUK54888.1|2318231_2319788_+	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	26.9	3.5e-10
>prophage 149
CP015571	Pasteurella multocida strain USDA-ARS-USMARC-60214 chromosome, complete genome	2333691	2325927	2331041	2333691		Organic_Lake_phycodnavirus(33.33%)	4	NA	NA
AUK54895.1|2325927_2326983_-	rod shape-determining protein	NA	F2Y0P3	Organic_Lake_phycodnavirus	26.5	8.8e-05
AUK54896.1|2327254_2329657_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	33.2	8.8e-69
AUK54897.1|2329657_2330395_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
AUK54898.1|2330480_2331041_-	superoxide dismutase	NA	Q9MC02	Salmonella_phage	61.8	2.8e-50
