The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP015567	Pasteurella multocida strain USDA-ARS-USMARC-60675 chromosome, complete genome	2462567	796545	897710	2462567	head,integrase,terminase,tail,portal,tRNA,plate,capsid	Mannheimia_phage(40.0%)	96	820428:820445	877960:877977
AUK44398.1|796545_797925_-|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	34.6	2.5e-44
AUK44399.1|798061_798571_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AUK45873.1|798715_799171_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AUK44400.1|799277_800069_+	deoxyribonuclease	NA	NA	NA	NA	NA
AUK44401.1|800107_800350_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44402.1|800374_800851_-	anaerobic ribonucleotide reductase-activating protein	NA	H6WXC9	Vibrio_phage	61.7	2.5e-52
AUK44403.1|800922_803064_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A2I7QNQ7	Vibrio_phage	62.1	2.2e-257
AUK44404.1|803366_804773_-	cytochrome-c peroxidase	NA	NA	NA	NA	NA
AUK44405.1|804962_806261_-	adenylosuccinate synthase	NA	W5S5V7	Pithovirus	36.5	1.1e-70
AUK44406.1|806440_807793_-	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
AUK44407.1|807927_809190_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.3	4.9e-95
AUK44408.1|809203_809884_-	hypothetical protein	NA	NA	NA	NA	NA
AUK44409.1|810015_810831_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44410.1|810915_812304_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AUK44411.1|812297_813437_-	peptidase	NA	NA	NA	NA	NA
AUK44412.1|813718_814210_-	hypothetical protein	NA	NA	NA	NA	NA
AUK44413.1|814345_815347_-	fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	44.5	1.9e-73
AUK44414.1|815492_816866_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
AUK44415.1|817334_818432_+	murein transglycosylase A	NA	NA	NA	NA	NA
AUK44416.1|818431_819193_+|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	S4VW33	Pandoravirus	32.2	2.0e-14
AUK44417.1|819339_820428_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
820428:820445	attL	AAAAGTGCGGTCATTTTT	NA	NA	NA	NA
AUK44418.1|820492_822313_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	25.7	2.5e-47
AUK44419.1|822565_822697_+	entericidin EcnAB	NA	NA	NA	NA	NA
AUK44420.1|822875_823880_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AUK44421.1|824127_824520_+	peptide-methionine (R)-S-oxide reductase	NA	NA	NA	NA	NA
AUK44422.1|824617_825244_+	guanylate kinase	NA	A0A223FN12	Murmansk_poxvirus	32.4	3.8e-16
AUK44423.1|825310_825580_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
AUK44424.1|825640_827764_+	guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	38.9	2.6e-11
AUK44425.1|827760_829842_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
AUK44426.1|829834_830347_+	chorismate--pyruvate lyase	NA	NA	NA	NA	NA
AUK44427.1|830343_831153_+	glutamate racemase	NA	NA	NA	NA	NA
AUK44428.1|836992_837664_-	hypothetical protein	NA	NA	NA	NA	NA
AUK44429.1|838396_839392_-|portal	phage portal protein	portal	Q19UT6	Mannheimia_phage	63.9	1.6e-120
AUK44430.1|839404_841198_-|terminase	terminase	terminase	A0A0M3LRV4	Mannheimia_phage	65.9	1.4e-223
AUK44431.1|841347_842199_+|capsid	capsid scaffolding protein	capsid	Q19UT4	Mannheimia_phage	51.8	7.7e-68
AUK44432.1|842214_843261_+|capsid	phage major capsid protein, P2 family	capsid	A0A0M3LPD2	Mannheimia_phage	56.6	6.5e-101
AUK44433.1|843264_843936_+|terminase	terminase	terminase	K4NX86	Burkholderia_phage	41.5	3.1e-32
AUK44434.1|844039_844546_+|head	phage head protein	head	A0A0M3LNL8	Mannheimia_phage	44.0	3.8e-30
AUK44435.1|844547_844763_+|tail	phage tail protein	tail	NA	NA	NA	NA
AUK44436.1|844773_845001_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44437.1|844990_845512_+	glycoside hydrolase	NA	A0A0M3LPQ1	Mannheimia_phage	42.5	2.1e-31
AUK44438.1|845496_845880_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44439.1|846019_846232_+	molecular chaperone DnaK	NA	A0A0M3LS11	Mannheimia_phage	49.3	1.3e-11
AUK44440.1|846228_846729_+|tail	phage tail protein	tail	A0A077K8R3	Ralstonia_phage	45.9	3.3e-26
AUK44441.1|846715_847171_+	phage virion morphogenesis protein	NA	A0A2H4J927	uncultured_Caudovirales_phage	47.8	3.5e-27
AUK44442.1|847185_850026_+|tail	phage tail tape measure protein	tail	A0A2H4JE61	uncultured_Caudovirales_phage	37.6	2.5e-78
AUK44443.1|850145_850769_+|plate	baseplate assembly protein	plate	A0A0M3LPY9	Mannheimia_phage	56.5	1.3e-35
AUK44444.1|850768_851107_+|plate	baseplate assembly protein W	plate	F1BUP4	Erwinia_phage	45.7	3.5e-16
AUK44445.1|851103_852018_+|plate	baseplate assembly protein	plate	Q19UQ5	Mannheimia_phage	61.5	2.0e-98
AUK44446.1|852007_852544_+|tail	phage tail protein I	tail	Q19UQ4	Mannheimia_phage	52.2	1.0e-49
AUK44447.1|852561_855375_+	hypothetical protein	NA	A0A1Y0SVL0	Pasteurella_phage	94.8	0.0e+00
AUK44448.1|855927_857118_+|tail	phage tail protein	tail	A0A0F7LBW9	Escherichia_phage	53.4	3.3e-117
AUK44449.1|857128_857635_+|tail	phage major tail tube protein	tail	Q19UP8	Mannheimia_phage	61.3	3.2e-53
AUK44450.1|857683_858001_+|tail	phage tail protein	tail	A0A2H4J8P1	uncultured_Caudovirales_phage	34.7	1.5e-08
AUK44451.1|858209_858647_+	oxidoreductase	NA	A0A0M3LQ18	Mannheimia_phage	52.4	1.6e-37
AUK44452.1|858643_859801_+|tail	phage tail protein	tail	R9QBT3	Mannheimia_phage	52.1	2.3e-107
AUK44453.1|860075_861311_-	hypothetical protein	NA	NA	NA	NA	NA
AUK44454.1|861363_861624_-	hypothetical protein	NA	NA	NA	NA	NA
AUK44455.1|861742_861937_-	hypothetical protein	NA	NA	NA	NA	NA
AUK44456.1|861973_862201_-	hypothetical protein	NA	NA	NA	NA	NA
AUK44457.1|862251_862512_-	hypothetical protein	NA	NA	NA	NA	NA
AUK44458.1|862700_863393_-	hypothetical protein	NA	A0A2H4J954	uncultured_Caudovirales_phage	50.0	4.7e-07
AUK44459.1|863404_864082_-	repressor	NA	A0A0M3LPF9	Mannheimia_phage	38.9	6.8e-35
AUK44460.1|864202_864421_+	Cro/Cl family transcriptional regulator	NA	G8C7U2	Escherichia_phage	52.4	2.0e-12
AUK44461.1|864435_864918_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44462.1|864917_865172_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44463.1|865264_865537_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44464.1|865558_865891_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44465.1|865874_866102_+	hypothetical protein	NA	NA	NA	NA	NA
AUK45874.1|866191_866524_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AUK44466.1|866523_867003_+	hypothetical protein	NA	A0A0M3LQA6	Mannheimia_phage	35.4	1.4e-13
AUK44467.1|867002_869171_+	replication protein	NA	F1BUM9	Cronobacter_phage	42.8	5.1e-124
AUK44468.1|869170_869530_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44469.1|869540_870032_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44470.1|870034_870712_+	DNA methylase N-4	NA	A0A2I7R760	Vibrio_phage	34.2	2.9e-25
AUK44471.1|870696_870984_+	hypothetical protein	NA	A0A0M3LQ35	Mannheimia_phage	40.9	3.7e-14
AUK44472.1|871005_871545_+	hypothetical protein	NA	A0A0M3LS47	Mannheimia_phage	40.0	2.6e-21
AUK44473.1|871555_871786_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44474.1|871787_872786_-|integrase	integrase	integrase	Q19US1	Mannheimia_phage	49.2	4.9e-82
AUK44475.1|873440_873932_+	heme iron utilization protein	NA	NA	NA	NA	NA
AUK44476.1|873947_874463_+	heme utilization protein HutZ	NA	NA	NA	NA	NA
AUK44477.1|874504_877408_+	ligand-gated channel protein	NA	NA	NA	NA	NA
AUK44478.1|877574_877844_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
AUK44479.1|877982_879095_-	Fe-S-binding ATPase	NA	NA	NA	NA	NA
877960:877977	attR	AAAAGTGCGGTCATTTTT	NA	NA	NA	NA
AUK44480.1|879276_881325_+|tRNA	methionine--tRNA ligase	tRNA	H2EDI7	Moumouvirus	30.1	2.5e-48
AUK44481.1|881458_883618_+	23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase	NA	NA	NA	NA	NA
AUK44482.1|883848_885183_+	type I-F CRISPR-associated protein Csy1	NA	NA	NA	NA	NA
AUK44483.1|885192_886176_+	type I-F CRISPR-associated protein Csy2	NA	NA	NA	NA	NA
AUK44484.1|886178_887186_+	type I-F CRISPR-associated protein Csy3	NA	A0A2D0YYX4	Vibrio_phage	39.0	4.9e-45
AUK44485.1|887188_887749_+	type I-F CRISPR-associated endoribonuclease Cas6/Csy4	NA	NA	NA	NA	NA
AUK44486.1|888986_889967_+	subtype I-F CRISPR-associated endonuclease Cas1	NA	A0A2D0YFC9	Vibrio_phage	37.8	8.3e-50
AUK44487.1|889947_893268_+	type I-F CRISPR-associated helicase Cas3	NA	F1D4K0	Vibrio_phage	29.2	3.2e-61
AUK44488.1|893325_895182_+	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	31.8	1.4e-37
AUK44489.1|895322_895913_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44490.1|895976_896780_-	inositol monophosphatase	NA	NA	NA	NA	NA
AUK44491.1|896993_897710_+|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	tRNA	NA	NA	NA	NA
>prophage 2
CP015567	Pasteurella multocida strain USDA-ARS-USMARC-60675 chromosome, complete genome	2462567	1308997	1366580	2462567	head,tRNA,terminase,tail	Haemophilus_phage(17.86%)	62	NA	NA
AUK44836.1|1308997_1310302_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
AUK44837.1|1310440_1311142_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AUK44838.1|1311164_1311881_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AUK44839.1|1311958_1313719_+	ribosomal protein S12 methylthiotransferase accessory factor YcaO	NA	NA	NA	NA	NA
AUK44840.1|1313839_1314253_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44841.1|1314482_1315184_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44842.1|1315254_1316028_-	TIGR01619 family protein	NA	NA	NA	NA	NA
AUK45883.1|1316037_1316841_-	exodeoxyribonuclease III	NA	A0A0N9QXX6	Chrysochromulina_ericina_virus	26.5	1.3e-13
AUK44843.1|1317087_1319049_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	40.6	7.2e-93
AUK44844.1|1319143_1319800_-	GTP cyclohydrolase I FolE	NA	I6XC45	Vibriophage	50.2	2.0e-52
AUK44845.1|1320042_1321263_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AUK44846.1|1321264_1321987_+	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA	NA
AUK44847.1|1321999_1322590_-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA	NA	NA	NA	NA
AUK44848.1|1322759_1324274_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	39.6	1.1e-85
AUK44849.1|1324287_1324779_-	colicin V synthesis protein	NA	NA	NA	NA	NA
AUK44850.1|1324934_1325378_-	hypothetical protein	NA	NA	NA	NA	NA
AUK44851.1|1325664_1326870_+	acetate kinase	NA	NA	NA	NA	NA
AUK44852.1|1326938_1329077_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
AUK44853.1|1329150_1330302_-	ribonuclease D	NA	NA	NA	NA	NA
AUK44854.1|1330356_1332045_-	long-chain-fatty-acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.1	1.1e-30
AUK44855.1|1332166_1332706_-	hypothetical protein	NA	NA	NA	NA	NA
AUK44856.1|1332741_1333461_-|tRNA	tRNA N6-adenosine(37)-N6-threonylcarbamoyltransferase complex dimerization subunit TsaB	tRNA	NA	NA	NA	NA
AUK44857.1|1333466_1335395_-	ATP-dependent helicase	NA	A0A127AW80	Bacillus_phage	31.7	3.5e-92
AUK44858.1|1335493_1336315_+	D-hexose-6-phosphate mutarotase	NA	NA	NA	NA	NA
AUK44859.1|1336385_1337345_-	malonate transporter	NA	NA	NA	NA	NA
AUK44860.1|1337475_1337778_+	RNA-binding protein	NA	NA	NA	NA	NA
AUK44861.1|1337950_1341997_-	hypothetical protein	NA	NA	NA	NA	NA
AUK44862.1|1342214_1342925_-	transcriptional regulator	NA	F6MII3	Haemophilus_phage	48.4	6.4e-52
AUK44863.1|1343100_1343367_+	DNA-binding protein	NA	F6MII4	Haemophilus_phage	63.4	1.2e-19
AUK44864.1|1343411_1345397_+	DDE endonuclease	NA	M4M9R2	Vibrio_phage	45.1	7.1e-157
AUK44865.1|1345407_1346325_+	DNA transposition protein	NA	M4M9P4	Vibrio_phage	43.5	1.5e-61
AUK44866.1|1346327_1346624_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44867.1|1346637_1346865_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44868.1|1346879_1347401_+	host-nuclease inhibitor protein Gam	NA	C9DGL8	Escherichia_phage	54.4	1.0e-46
AUK44869.1|1347486_1347675_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44870.1|1347882_1348797_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44871.1|1348866_1349367_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44872.1|1349363_1349906_+	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	43.7	2.4e-38
AUK44873.1|1349905_1350268_+	transcriptional regulator	NA	Q6QIE8	Burkholderia_phage	44.2	2.9e-24
AUK44874.1|1350386_1350809_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44875.1|1350933_1351470_+	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	69.7	1.3e-73
AUK44876.1|1351480_1351708_+	hypothetical protein	NA	F6MIK0	Haemophilus_phage	72.4	6.0e-20
AUK44877.1|1351704_1351965_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44878.1|1351885_1352086_+	hypothetical protein	NA	F6MIK2	Haemophilus_phage	47.4	8.8e-07
AUK44879.1|1352082_1352412_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44880.1|1352408_1352711_+	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	61.5	2.2e-25
AUK44881.1|1352733_1353306_+	hypothetical protein	NA	M4MCR3	Vibrio_phage	44.0	1.7e-34
AUK44882.1|1353292_1354600_+|terminase	terminase	terminase	A0A2P9JZI8	Alteromonadaceae_phage	65.7	6.5e-151
AUK44883.1|1354601_1356017_+	hypothetical protein	NA	Q6QIC0	Burkholderia_phage	45.8	2.0e-113
AUK44884.1|1356017_1357289_+|head	phage head morphogenesis protein	head	J9STS2	Pseudomonas_phage	49.1	2.5e-54
AUK44885.1|1357417_1357882_+	phage virion morphogenesis protein	NA	Q6QIB8	Burkholderia_phage	38.8	6.8e-10
AUK44886.1|1358132_1359236_+	peptidase	NA	A4JWJ9	Burkholderia_virus	42.0	4.6e-73
AUK44887.1|1359254_1360181_+	hypothetical protein	NA	A4JWK0	Burkholderia_virus	47.9	1.0e-73
AUK44888.1|1360246_1360564_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44889.1|1360563_1360998_+	hypothetical protein	NA	A4JWK2	Burkholderia_virus	37.8	4.0e-20
AUK44890.1|1361009_1361507_+	hypothetical protein	NA	NA	NA	NA	NA
AUK44891.1|1361516_1362902_+|tail	phage tail protein	tail	A4JWK5	Burkholderia_virus	44.3	2.0e-97
AUK44892.1|1362912_1363431_+|tail	phage major tail tube protein	tail	A4JWK6	Burkholderia_virus	45.0	3.9e-38
AUK44893.1|1363523_1363793_+|tail	phage tail protein	tail	NA	NA	NA	NA
AUK44894.1|1363813_1363948_+|tail	phage tail protein	tail	NA	NA	NA	NA
AUK44895.1|1363963_1364197_-	hypothetical protein	NA	NA	NA	NA	NA
AUK44896.1|1364231_1366580_+|tail	phage tail tape measure protein	tail	K4ICR4	Acidithiobacillus_phage	38.8	1.1e-71
>prophage 3
CP015567	Pasteurella multocida strain USDA-ARS-USMARC-60675 chromosome, complete genome	2462567	1675264	1709834	2462567	tRNA,plate,tail	Bacillus_virus(12.5%)	33	NA	NA
AUK45140.1|1675264_1676551_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.8	1.6e-93
AUK45141.1|1676809_1678147_-	recombination factor protein RarA	NA	G3MBE0	Bacillus_virus	40.3	3.6e-80
AUK45142.1|1678158_1678776_-	outer-membrane lipoprotein carrier protein LolA	NA	NA	NA	NA	NA
AUK45143.1|1678786_1681579_-	cell division protein FtsK	NA	A0A218M9A2	Mycobacterium_phage	41.9	2.8e-82
AUK45144.1|1681583_1682063_-	transcriptional regulator	NA	NA	NA	NA	NA
AUK45145.1|1682235_1682571_+	hypothetical protein	NA	NA	NA	NA	NA
AUK45146.1|1682592_1683972_-	DNA repair protein RadA	NA	NA	NA	NA	NA
AUK45147.1|1683975_1685043_-	adenylate cyclase	NA	NA	NA	NA	NA
AUK45148.1|1685218_1685899_+	TIGR00153 family protein	NA	NA	NA	NA	NA
AUK45149.1|1685925_1687188_+	phosphate permease	NA	M4QMY4	Ostreococcus_lucimarinus_virus	34.9	4.8e-58
AUK45150.1|1687252_1687864_+	hypothetical protein	NA	NA	NA	NA	NA
AUK45151.1|1687873_1689148_+|tRNA	multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	49.5	1.8e-92
AUK45152.1|1689188_1689806_+	lipoprotein localization factor LolB	NA	NA	NA	NA	NA
AUK45153.1|1689805_1690693_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
AUK45154.1|1690762_1691710_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	38.7	1.9e-43
AUK45155.1|1691785_1693339_-	peptidase M23	NA	A0A2K9VGT1	Pontimonas_phage	49.6	8.4e-20
AUK45156.1|1693573_1694365_+	zinc ABC transporter ATP-binding protein ZnuC	NA	A0A2K9L3Z8	Tupanvirus	32.8	3.7e-16
AUK45157.1|1694373_1695159_+	high-affinity zinc transporter membrane component	NA	NA	NA	NA	NA
AUK45158.1|1695235_1696216_-	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.4	1.3e-15
AUK45159.1|1696232_1697231_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	2.3e-15
AUK45160.1|1697241_1698135_-	peptide transporter	NA	NA	NA	NA	NA
AUK45161.1|1698157_1699162_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
AUK45162.1|1699349_1699700_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45163.1|1699924_1700104_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45164.1|1700164_1702621_-	hypothetical protein	NA	A0A1Y0SVL0	Pasteurella_phage	95.1	0.0e+00
AUK45165.1|1702635_1703202_-|tail	phage tail protein	tail	Q6QI98	Burkholderia_phage	46.4	3.1e-41
AUK45166.1|1703194_1704307_-|plate	phage baseplate protein	plate	A4JWL6	Burkholderia_virus	35.6	3.6e-57
AUK45893.1|1704296_1704662_-|plate	phage baseplate protein	plate	NA	NA	NA	NA
AUK45167.1|1704714_1705296_-|plate	phage baseplate protein	plate	NA	NA	NA	NA
AUK45168.1|1705310_1706363_-	hypothetical protein	NA	A4JWL3	Burkholderia_virus	41.8	1.5e-60
AUK45169.1|1706362_1706584_-	hypothetical protein	NA	Q6QIA3	Burkholderia_phage	43.3	1.1e-10
AUK45170.1|1706571_1707522_-|tail	phage tail protein	tail	NA	NA	NA	NA
AUK45171.1|1707530_1709834_-|tail	phage tail tape measure protein	tail	K4ICR4	Acidithiobacillus_phage	38.3	1.3e-69
>prophage 4
CP015567	Pasteurella multocida strain USDA-ARS-USMARC-60675 chromosome, complete genome	2462567	1716161	1731346	2462567	transposase	Vibrio_phage(33.33%)	25	NA	NA
AUK45178.1|1716161_1716575_-	phage virion morphogenesis protein	NA	Q5ZQY1	Pseudomonas_phage	45.3	8.4e-20
AUK45179.1|1716817_1717006_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45180.1|1718406_1719852_-	hypothetical protein	NA	Q6QIC0	Burkholderia_phage	53.5	3.4e-116
AUK45895.1|1719844_1721317_-	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	61.4	3.9e-160
AUK45181.1|1721403_1721985_-	hypothetical protein	NA	A0A2I7S9D1	Vibrio_phage	44.5	2.4e-36
AUK45182.1|1722007_1722310_-	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	61.5	2.2e-25
AUK45183.1|1722306_1722636_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45184.1|1722632_1722833_-	hypothetical protein	NA	F6MIK2	Haemophilus_phage	47.4	8.8e-07
AUK45185.1|1722753_1723014_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45186.1|1723010_1723241_-	hypothetical protein	NA	F6MIK0	Haemophilus_phage	70.7	3.3e-18
AUK45187.1|1723224_1723581_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45188.1|1723735_1724272_-	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	68.6	1.2e-71
AUK45189.1|1724349_1724712_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45896.1|1724786_1725161_-	transcriptional regulator	NA	Q6QIE8	Burkholderia_phage	46.2	3.3e-23
AUK45190.1|1725164_1725650_-	hypothetical protein	NA	A0A0C4UQU3	Shigella_phage	33.8	2.8e-14
AUK45191.1|1725723_1726425_-	hypothetical protein	NA	L7P7W8	Pseudomonas_phage	30.9	5.1e-17
AUK45192.1|1726433_1726649_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45193.1|1726665_1726857_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45194.1|1726934_1727453_-	host-nuclease inhibitor protein Gam	NA	C9DGL8	Escherichia_phage	64.3	2.3e-54
AUK45195.1|1727445_1727685_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45196.1|1727681_1727957_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45197.1|1727974_1728178_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45198.1|1728177_1729095_-	DNA transposition protein	NA	A0A2I7S9C3	Vibrio_phage	43.4	3.1e-62
AUK45199.1|1729121_1731125_-|transposase	transposase	transposase	M4M9R2	Vibrio_phage	35.5	3.5e-95
AUK45200.1|1731109_1731346_-	transcriptional regulator	NA	M1PVU4	Vibrio_phage	54.0	5.7e-13
>prophage 5
CP015567	Pasteurella multocida strain USDA-ARS-USMARC-60675 chromosome, complete genome	2462567	2020904	2094079	2462567	head,transposase,tail,protease,tRNA,plate	Burkholderia_virus(15.15%)	83	NA	NA
AUK45446.1|2020904_2022176_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
AUK45447.1|2022205_2023309_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	NA	NA	NA	NA	NA
AUK45448.1|2023335_2024292_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45449.1|2024414_2024960_-	type IV pilus biogenesis/stability protein PilW	NA	NA	NA	NA	NA
AUK45450.1|2024998_2026183_-|tRNA	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	tRNA	NA	NA	NA	NA
AUK45451.1|2026363_2027617_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45452.1|2027617_2027956_-	transcriptional regulator	NA	NA	NA	NA	NA
AUK45453.1|2028000_2028579_-	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
AUK45454.1|2028604_2029534_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
AUK45455.1|2029535_2030165_-	acyltransferase	NA	NA	NA	NA	NA
AUK45456.1|2030175_2030832_-	CDP-alcohol phosphatidyltransferase	NA	NA	NA	NA	NA
AUK45457.1|2030846_2032703_-	citrate transporter	NA	Q6A201	Oenococcus_phage	28.0	1.5e-12
AUK45458.1|2032733_2033327_-	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	40.8	1.2e-27
AUK45459.1|2033328_2034507_-	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AUK45460.1|2034582_2035371_-	acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AUK45904.1|2035388_2035799_-	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ	NA	NA	NA	NA	NA
AUK45461.1|2035952_2036981_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AUK45462.1|2036980_2037562_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45463.1|2037670_2040046_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
AUK45464.1|2040075_2041404_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
AUK45465.1|2041425_2042295_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
AUK45466.1|2042311_2043034_-	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	45.2	1.1e-25
AUK45905.1|2043083_2044283_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
AUK45467.1|2044417_2044882_-|transposase	transposase	transposase	A0A0A8WIU6	Clostridium_phage	36.1	2.3e-13
AUK45468.1|2045166_2045724_-	ribosome recycling factor	NA	NA	NA	NA	NA
AUK45469.1|2045799_2046528_-	UMP kinase	NA	NA	NA	NA	NA
AUK45470.1|2046671_2047520_-	translation elongation factor Ts	NA	NA	NA	NA	NA
AUK45471.1|2047661_2048384_-	30S ribosomal protein S2	NA	NA	NA	NA	NA
AUK45472.1|2048642_2049608_+	hemolysin D	NA	NA	NA	NA	NA
AUK45473.1|2049622_2052355_+	multidrug ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.4	3.9e-20
AUK45474.1|2052356_2053481_+	hypothetical protein	NA	NA	NA	NA	NA
AUK45475.1|2053490_2054882_+	outer membrane protein	NA	NA	NA	NA	NA
AUK45476.1|2054954_2056835_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AUK45477.1|2056965_2059380_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	6.5e-221
AUK45478.1|2059504_2060740_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.8	2.6e-125
AUK45479.1|2060942_2061122_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45480.1|2061182_2063639_-	hypothetical protein	NA	A0A1Y0SVL0	Pasteurella_phage	95.1	0.0e+00
AUK45481.1|2063653_2064220_-|tail	phage tail protein	tail	Q6QI98	Burkholderia_phage	46.4	3.1e-41
AUK45482.1|2064212_2065325_-|plate	phage baseplate protein	plate	A4JWL6	Burkholderia_virus	35.6	3.6e-57
AUK45906.1|2065314_2065680_-|plate	phage baseplate protein	plate	NA	NA	NA	NA
AUK45483.1|2065732_2066314_-|plate	phage baseplate protein	plate	NA	NA	NA	NA
AUK45484.1|2066328_2067381_-	hypothetical protein	NA	A4JWL3	Burkholderia_virus	41.8	1.5e-60
AUK45485.1|2067380_2067602_-	hypothetical protein	NA	Q6QIA3	Burkholderia_phage	43.3	1.1e-10
AUK45486.1|2067589_2068540_-|tail	phage tail protein	tail	NA	NA	NA	NA
AUK45487.1|2068548_2070852_-|tail	phage tail tape measure protein	tail	K4ICR4	Acidithiobacillus_phage	38.3	1.3e-69
AUK45488.1|2070891_2071083_+	hypothetical protein	NA	NA	NA	NA	NA
AUK45907.1|2071079_2071202_-|tail	phage tail protein	tail	NA	NA	NA	NA
AUK45489.1|2071228_2071507_-|tail	phage tail protein	tail	NA	NA	NA	NA
AUK45490.1|2071588_2072104_-|tail	phage major tail tube protein	tail	NA	NA	NA	NA
AUK45491.1|2072103_2073495_-|tail	phage tail protein	tail	A4JWK5	Burkholderia_virus	47.3	1.9e-108
AUK45492.1|2073504_2073972_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45493.1|2073971_2074421_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45494.1|2074420_2074879_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45495.1|2074931_2075858_-	inorganic pyrophosphatase	NA	A4JWK0	Burkholderia_virus	49.3	1.7e-76
AUK45496.1|2075867_2076971_-	peptidase	NA	A4JWJ9	Burkholderia_virus	41.8	4.3e-71
AUK45497.1|2077207_2077663_-	phage virion morphogenesis protein	NA	Q5ZQY1	Pseudomonas_phage	40.1	1.9e-20
AUK45498.1|2077864_2078053_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45908.1|2078189_2079455_-|head	phage head morphogenesis protein	head	J9STS2	Pseudomonas_phage	44.4	3.1e-65
AUK45499.1|2079456_2080902_-	hypothetical protein	NA	Q6QIC0	Burkholderia_phage	53.5	3.4e-116
AUK45909.1|2080894_2082367_-	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	61.4	3.9e-160
AUK45500.1|2082453_2083035_-	hypothetical protein	NA	A0A2I7S9D1	Vibrio_phage	44.5	2.4e-36
AUK45501.1|2083057_2083360_-	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	61.5	2.2e-25
AUK45502.1|2083356_2083686_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45503.1|2083682_2083883_-	hypothetical protein	NA	F6MIK2	Haemophilus_phage	47.4	8.8e-07
AUK45504.1|2083803_2084064_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45505.1|2084060_2084291_-	hypothetical protein	NA	F6MIK0	Haemophilus_phage	70.7	3.3e-18
AUK45506.1|2084274_2084631_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45507.1|2084785_2085322_-	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	68.6	1.2e-71
AUK45508.1|2085399_2085762_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45910.1|2085836_2086211_-	transcriptional regulator	NA	Q6QIE8	Burkholderia_phage	46.2	3.3e-23
AUK45509.1|2086214_2086700_-	hypothetical protein	NA	A0A0C4UQU3	Shigella_phage	33.8	2.8e-14
AUK45510.1|2086773_2087475_-	hypothetical protein	NA	L7P7W8	Pseudomonas_phage	30.9	5.1e-17
AUK45511.1|2087483_2087699_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45512.1|2087715_2087907_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45513.1|2087984_2088503_-	host-nuclease inhibitor protein Gam	NA	C9DGL8	Escherichia_phage	64.3	2.3e-54
AUK45514.1|2088495_2088735_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45515.1|2088731_2089007_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45516.1|2089024_2089228_-	hypothetical protein	NA	NA	NA	NA	NA
AUK45517.1|2089227_2090145_-	DNA transposition protein	NA	A0A2I7S9C3	Vibrio_phage	43.4	3.1e-62
AUK45518.1|2090171_2092175_-|transposase	transposase	transposase	M4M9R2	Vibrio_phage	35.5	3.5e-95
AUK45519.1|2092159_2092396_-	transcriptional regulator	NA	M1PVU4	Vibrio_phage	54.0	5.7e-13
AUK45911.1|2092608_2093124_+	ci repressor-like protein	NA	NA	NA	NA	NA
AUK45520.1|2093497_2094079_-	ATP-dependent Clp endopeptidase, proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	62.4	3.1e-60
