The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP028787	Klebsiella pneumoniae strain SCKP020049 chromosome, complete genome	5256586	1191359	1200806	5256586		Enterobacteria_phage(83.33%)	10	NA	NA
AWA61792.1|1191359_1193693_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	84.4	0.0e+00
AWA61793.1|1193707_1194028_-	hypothetical protein	NA	NA	NA	NA	NA
AWA61794.1|1194024_1194252_-	hypothetical protein	NA	NA	NA	NA	NA
AWA61795.1|1194248_1194800_-	host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	70.4	3.0e-33
AWA61796.1|1195612_1196350_+	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	66.1	6.9e-81
AWA61797.1|1196346_1196592_+	hypothetical protein	NA	Q7M294	Enterobacteria_phage	77.8	3.7e-31
AWA61798.1|1196608_1197175_+	phage polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	1.5e-56
AWA61799.1|1197216_1197324_-	acetyl xylan esterase	NA	NA	NA	NA	NA
AWA61800.1|1197689_1199582_+	hypothetical protein	NA	NA	NA	NA	NA
AWA61801.1|1199618_1200806_-	DUF4102 domain-containing protein	NA	A0A1B5FPC6	Escherichia_phage	51.0	2.4e-107
>prophage 2
CP028787	Klebsiella pneumoniae strain SCKP020049 chromosome, complete genome	5256586	1317111	1360327	5256586	holin,integrase,tail,transposase,terminase	Salmonella_phage(33.33%)	54	1314538:1314553	1341946:1341961
1314538:1314553	attL	CGCTGCTGGCGCCGCC	NA	NA	NA	NA
AWA61903.1|1317111_1318578_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	1.2e-87
AWA61904.1|1318645_1320223_+	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA	NA
AWA61905.1|1320414_1321665_+|integrase	site-specific integrase	integrase	A0A1X9TCT6	Enterobacter_phage	85.1	6.8e-206
AWA61906.1|1321681_1321873_-	hypothetical protein	NA	NA	NA	NA	NA
AWA61907.1|1321869_1322463_-	adenine methylase	NA	T1SA14	Salmonella_phage	91.4	3.7e-109
AWA61908.1|1322459_1322618_-	DUF1317 family protein	NA	T1SAR0	Salmonella_phage	80.8	5.1e-18
AWA61909.1|1322610_1322904_-	PerC family transcriptional regulator	NA	T1S9J5	Salmonella_phage	71.1	8.9e-32
AWA61910.1|1323013_1323262_-	AlpA family phage regulatory protein	NA	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	78.0	2.8e-31
AWA61911.1|1323310_1324192_-	recombinase RecT	NA	T1SBJ5	Salmonella_phage	84.3	6.8e-136
AWA61912.1|1324188_1325010_-	exodeoxyribonuclease VIII	NA	A0A193GYK2	Enterobacter_phage	80.6	6.2e-131
AWA61913.1|1325009_1325294_-	hypothetical protein	NA	B5WZV1	Pseudomonas_phage	44.0	2.4e-10
AWA61914.1|1325290_1325590_-	hypothetical protein	NA	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	54.5	4.7e-20
AWA65481.1|1325597_1326629_-	hypothetical protein	NA	A0A1B0VN89	Pseudomonas_phage	51.4	3.6e-35
AWA61915.1|1327029_1327611_-	XRE family transcriptional regulator	NA	Q858D7	Salmonella_phage	64.3	2.1e-64
AWA61916.1|1327764_1327998_+	hypothetical protein	NA	T1SAR5	Salmonella_phage	66.2	9.2e-24
AWA61917.1|1328144_1328354_+	hypothetical protein	NA	A0A193GYW4	Enterobacter_phage	78.3	1.4e-26
AWA61918.1|1328353_1329115_+	primosomal protein	NA	A0A193GZ86	Enterobacter_phage	90.2	1.6e-136
AWA61919.1|1329111_1329897_+	replication protein	NA	A0A193GYX1	Enterobacter_phage	87.7	3.7e-133
AWA61920.1|1330016_1330364_+	DUF1064 domain-containing protein	NA	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	83.5	1.7e-50
AWA65482.1|1330556_1331096_+	hypothetical protein	NA	R9TME7	Aeromonas_phage	41.9	1.5e-08
AWA61921.1|1331372_1332134_+	ead/Ea22-like family protein	NA	C6ZR30	Salmonella_phage	65.2	6.8e-07
AWA61922.1|1332130_1332310_+	hypothetical protein	NA	NA	NA	NA	NA
AWA61923.1|1332306_1333050_+	hypothetical protein	NA	K7P7E4	Enterobacteria_phage	56.6	3.3e-14
AWA61924.1|1333134_1333374_+	hypothetical protein	NA	G8C7S3	Escherichia_phage	51.7	1.9e-08
AWA61925.1|1333373_1333610_+	hypothetical protein	NA	NA	NA	NA	NA
AWA61926.1|1333602_1333941_+	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	88.2	1.9e-49
AWA65483.1|1334015_1334273_+	lF-82	NA	NA	NA	NA	NA
AWA61927.1|1334350_1334935_+|terminase	terminase small subunit	terminase	T1SBI8	Salmonella_phage	89.1	1.3e-90
AWA61928.1|1334931_1336407_+|terminase	terminase	terminase	Q858H3	Salmonella_phage	92.5	1.9e-279
AWA61929.1|1336418_1336691_-	hypothetical protein	NA	NA	NA	NA	NA
AWA61930.1|1336776_1337142_-	hypothetical protein	NA	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	95.9	5.1e-61
AWA61931.1|1337633_1337822_+	hypothetical protein	NA	NA	NA	NA	NA
AWA61932.1|1337841_1338048_+	hypothetical protein	NA	T1SA67	Salmonella_phage	88.2	4.8e-08
AWA61933.1|1338062_1339745_+|tail	phage tail protein	tail	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	84.4	2.5e-264
AWA61934.1|1339741_1340038_+	hypothetical protein	NA	T1SBI9	Salmonella_phage	70.4	9.6e-34
AWA61935.1|1340040_1340730_+	peptidase	NA	G9L6C4	Escherichia_phage	69.6	2.9e-65
AWA61936.1|1340744_1341731_+	hypothetical protein	NA	A0A193GZ49	Enterobacter_phage	93.6	3.3e-179
AWA61937.1|1341784_1342222_+	hypothetical protein	NA	A0A193GYT9	Enterobacter_phage	91.7	1.3e-66
1341946:1341961	attR	CGCTGCTGGCGCCGCC	NA	NA	NA	NA
AWA61938.1|1342232_1342574_+	hypothetical protein	NA	G9L6C7	Escherichia_phage	71.9	1.1e-36
AWA61939.1|1342624_1342948_+	hypothetical protein	NA	G9L6C8	Escherichia_phage	85.0	5.3e-46
AWA61940.1|1342947_1343553_+	hypothetical protein	NA	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	79.0	3.3e-89
AWA61941.1|1343552_1346030_+	hypothetical protein	NA	Q858G3	Salmonella_phage	84.2	0.0e+00
AWA61942.1|1346029_1346494_+	hypothetical protein	NA	Q858G2	Salmonella_phage	81.2	1.5e-70
AWA61943.1|1346493_1347033_+	hypothetical protein	NA	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	79.4	3.0e-70
AWA61944.1|1347043_1349857_+	hypothetical protein	NA	T1SBJ1	Salmonella_phage	93.3	0.0e+00
AWA61945.1|1349853_1351659_+	hypothetical protein	NA	A0A0F6TJQ3	Escherichia_coli_O157_typing_phage	73.3	1.7e-237
AWA61946.1|1351662_1354137_+	hypothetical protein	NA	A0A0F6TK45	Escherichia_coli_O157_typing_phage	87.0	0.0e+00
AWA61947.1|1354335_1354632_+	hypothetical protein	NA	A0A2R9YJP3	Escherichia_phage	94.8	4.4e-47
AWA61948.1|1354666_1354819_-	transmembrane anchored protein	NA	G9L6D9	Escherichia_phage	83.7	3.3e-14
AWA65484.1|1354917_1355178_-	hypothetical protein	NA	A0A0F6R8M4	Escherichia_coli_O157_typing_phage	64.0	2.1e-24
AWA61949.1|1355277_1356498_+|transposase	ISL3-like element ISKox3 family transposase	transposase	NA	NA	NA	NA
AWA61950.1|1359046_1359295_+	hypothetical protein	NA	NA	NA	NA	NA
AWA61951.1|1359630_1360035_+	hypothetical protein	NA	T1SA79	Salmonella_phage	84.1	9.3e-56
AWA61952.1|1360021_1360327_+|holin	phage holin family protein	holin	A0A193GYK3	Enterobacter_phage	80.4	7.8e-39
>prophage 3
CP028787	Klebsiella pneumoniae strain SCKP020049 chromosome, complete genome	5256586	1702833	1709740	5256586		Planktothrix_phage(33.33%)	6	NA	NA
AWA65501.1|1702833_1703697_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.0	4.8e-09
AWA62241.1|1703707_1704481_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	3.9e-26
AWA65502.1|1704723_1705617_-	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
AWA62242.1|1705862_1707224_-	U32 family peptidase	NA	Q6DW11	Phage_TP	94.8	1.8e-207
AWA62243.1|1707542_1708265_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
AWA62244.1|1708261_1709740_-	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	5.0e-30
>prophage 4
CP028787	Klebsiella pneumoniae strain SCKP020049 chromosome, complete genome	5256586	1751304	1761206	5256586	transposase	Escherichia_phage(37.5%)	8	NA	NA
AWA62270.1|1751304_1752711_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.9	1.6e-38
AWA62271.1|1752952_1754017_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.1	6.4e-104
AWA62272.1|1754043_1754913_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	67.0	7.5e-111
AWA62273.1|1754944_1755835_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	3.7e-28
AWA62274.1|1755849_1756404_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	57.6	1.9e-51
AWA62275.1|1756584_1757751_+	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.7	4.1e-112
AWA62276.1|1758695_1759700_-	NAD-dependent epimerase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	29.5	1.0e-31
AWA62277.1|1760225_1761206_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
>prophage 5
CP028787	Klebsiella pneumoniae strain SCKP020049 chromosome, complete genome	5256586	1866442	1950907	5256586	capsid,head,holin,tail,tRNA,portal,terminase,protease	Enterobacteria_phage(21.05%)	100	NA	NA
AWA62377.1|1866442_1868176_-|tRNA	arginine--tRNA ligase	tRNA	A0A2K9L6Z2	Tupanvirus	33.8	1.4e-87
AWA62378.1|1868411_1868981_+	VOC family protein	NA	NA	NA	NA	NA
AWA62379.1|1869057_1869801_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
AWA62380.1|1869882_1870887_-|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	tRNA	NA	NA	NA	NA
AWA62381.1|1870883_1871627_-	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	F5B419	Synechococcus_phage	30.0	4.1e-25
AWA62382.1|1871666_1872062_-	hypothetical protein	NA	NA	NA	NA	NA
AWA62383.1|1872114_1872894_-	DUF72 domain-containing protein	NA	Q859D1	Escherichia_coli_phage	82.7	1.1e-60
AWA62384.1|1872890_1874150_-	DUF3596 domain-containing protein	NA	A0A286S1S8	Klebsiella_phage	90.2	2.1e-223
AWA62385.1|1874192_1874438_-	excisionase	NA	A0A286S2A4	Klebsiella_phage	92.1	1.4e-35
AWA62386.1|1874571_1874865_-	hypothetical protein	NA	A0A1U8QJU8	Salmonella_virus	58.3	9.8e-23
AWA62387.1|1874861_1875509_-	hypothetical protein	NA	R9VWB9	Serratia_phage	52.6	5.1e-56
AWA62388.1|1875501_1875846_-	hypothetical protein	NA	NA	NA	NA	NA
AWA62389.1|1875842_1876067_-	hypothetical protein	NA	A0A286S2B3	Klebsiella_phage	60.8	1.5e-18
AWA62390.1|1876063_1876291_-	hypothetical protein	NA	A0A291LBA3	Klebsiella_phage	46.8	8.1e-09
AWA62391.1|1876592_1876886_-	host cell division inhibitory peptide Kil	NA	NA	NA	NA	NA
AWA62392.1|1877076_1877265_-	hypothetical protein	NA	NA	NA	NA	NA
AWA62393.1|1877938_1878571_-	helix-turn-helix domain-containing protein	NA	A0A1I9KG86	Aeromonas_phage	36.9	6.4e-35
AWA62394.1|1878669_1878891_+	helix-turn-helix domain-containing protein	NA	Q716D6	Shigella_phage	55.7	8.2e-14
AWA62395.1|1878930_1879251_+	hypothetical protein	NA	A0A0M4RU01	Salmonella_phage	68.9	5.0e-36
AWA62396.1|1879446_1879701_+	hypothetical protein	NA	NA	NA	NA	NA
AWA62397.1|1879697_1880747_+	hypothetical protein	NA	K7PLZ7	Enterobacterial_phage	51.5	2.7e-30
AWA62398.1|1880773_1881169_+	hypothetical protein	NA	NA	NA	NA	NA
AWA62399.1|1881168_1881390_+	hypothetical protein	NA	NA	NA	NA	NA
AWA62400.1|1881382_1882174_+	hypothetical protein	NA	A4JX52	Burkholderia_virus	51.7	5.3e-63
AWA62401.1|1882166_1882799_+	ead/Ea22-like family protein	NA	K7PJQ4	Enterobacteria_phage	40.2	9.0e-05
AWA62402.1|1882962_1883562_+	DUF551 domain-containing protein	NA	G9L6B4	Escherichia_phage	59.5	2.7e-19
AWA65511.1|1883561_1883750_+	hypothetical protein	NA	R9TNE4	Aeromonas_phage	72.9	4.7e-18
AWA62403.1|1883822_1884092_+	hypothetical protein	NA	H6WRY4	Salmonella_phage	80.7	3.5e-35
AWA62404.1|1884333_1884642_+	DUF968 domain-containing protein	NA	Q6V7S4	Burkholderia_virus	57.6	1.6e-23
AWA62405.1|1884634_1885279_+	phage N-6-adenine-methyltransferase	NA	Q8HA94	Salmonella_phage	81.0	3.6e-102
AWA62406.1|1885275_1885875_+	hypothetical protein	NA	H9C175	Pectobacterium_phage	58.4	1.1e-65
AWA62407.1|1886577_1886847_+|holin	holin	holin	K7P6H9	Enterobacteria_phage	78.3	2.8e-32
AWA65512.1|1886824_1887322_+	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	83.6	9.6e-79
AWA62408.1|1887318_1887708_+	DUF2570 domain-containing protein	NA	A0A192Y6H8	Salmonella_phage	50.0	1.5e-23
AWA62409.1|1887700_1887850_+	Rz1 lytic protein	NA	S5FXQ4	Shigella_phage	71.4	1.1e-09
AWA62410.1|1887973_1888294_+	hypothetical protein	NA	NA	NA	NA	NA
AWA62411.1|1888296_1888647_+	HNH endonuclease	NA	K7PHK9	Enterobacteria_phage	80.2	1.2e-51
AWA62412.1|1888804_1889302_+|terminase	phage terminase small subunit P27 family	terminase	K7PHI2	Enterobacteria_phage	72.1	1.1e-61
AWA62413.1|1889301_1891059_+|terminase	terminase large subunit	terminase	A0A1B5FP96	Escherichia_phage	91.1	0.0e+00
AWA62414.1|1891069_1891255_+	hypothetical protein	NA	Q8HAD5	Salmonella_phage	61.7	6.2e-15
AWA62415.1|1891254_1892484_+|portal	phage portal protein	portal	U5P411	Shigella_phage	82.4	8.2e-204
AWA62416.1|1892470_1893124_+|head,protease	HK97 family phage prohead protease	head,protease	Q8W628	Enterobacteria_phage	87.9	7.1e-106
AWA62417.1|1893138_1894347_+|capsid	phage major capsid protein	capsid	M1FPN2	Enterobacteria_phage	84.8	2.2e-193
AWA62418.1|1894385_1894589_+	hypothetical protein	NA	M1FN89	Enterobacteria_phage	42.4	2.3e-07
AWA62419.1|1894585_1894906_+|head,tail	phage gp6-like head-tail connector protein	head,tail	K7PKT4	Enterobacteria_phage	39.8	1.7e-15
AWA62420.1|1894914_1895253_+|head,tail	head-tail adaptor protein	head,tail	A0A2H4JHK5	uncultured_Caudovirales_phage	74.1	1.4e-41
AWA62421.1|1895249_1895699_+	HK97 gp10 family phage protein	NA	Q9MCS9	Enterobacteria_phage	81.9	9.7e-62
AWA62422.1|1895695_1896043_+	DUF3168 domain-containing protein	NA	K7PKL6	Enterobacterial_phage	62.8	8.0e-32
AWA62423.1|1896099_1896804_+|tail	phage tail protein	tail	K7PHL2	Enterobacterial_phage	66.9	5.5e-80
AWA62424.1|1896834_1897239_+|tail	phage tail protein	tail	K7PKV6	Enterobacterial_phage	57.7	8.5e-33
AWA62425.1|1897241_1897547_+	DUF4035 domain-containing protein	NA	Q9MCS5	Enterobacteria_phage	64.6	4.7e-28
AWA62426.1|1897620_1897854_+	hypothetical protein	NA	K7PH16	Enterobacteria_phage	47.2	1.9e-08
AWA62427.1|1897914_1901301_+|tail	phage tail tape measure protein	tail	A0A0P0ZCJ4	Stx2-converting_phage	57.9	1.5e-303
AWA62428.1|1901321_1901795_+	hypothetical protein	NA	A0A286S298	Klebsiella_phage	61.4	1.6e-54
AWA62429.1|1901781_1902267_+	DUF1833 domain-containing protein	NA	A0A286S2B1	Klebsiella_phage	66.2	3.0e-53
AWA62430.1|1902276_1902657_+	nitrite transporter	NA	A0A286S2A6	Klebsiella_phage	80.2	2.1e-57
AWA62431.1|1902653_1905728_+	kinase	NA	A0A286S259	Klebsiella_phage	70.6	0.0e+00
AYE54689.1|1907872_1908124_+	hypothetical protein	NA	NA	NA	NA	NA
AWA62432.1|1908385_1909927_+	hypothetical protein	NA	NA	NA	NA	NA
AWA62433.1|1909934_1911158_-	hypothetical protein	NA	NA	NA	NA	NA
AWA62434.1|1911535_1911775_+	hypothetical protein	NA	K7P7N3	Enterobacteria_phage	63.3	3.0e-22
AWA62435.1|1911999_1912566_-	hydrolase	NA	NA	NA	NA	NA
AWA62436.1|1912833_1914621_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L3L6	Tupanvirus	27.2	1.3e-11
AWA62437.1|1914622_1915066_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA	NA
AWA62438.1|1915093_1915834_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AWA62439.1|1915868_1916390_+	crossover junction endodeoxyribonuclease RuvC	NA	G3MA90	Bacillus_virus	35.1	3.4e-10
AWA62440.1|1916469_1917081_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AWA62441.1|1917089_1918100_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	24.3	1.4e-07
AWA62442.1|1918163_1918949_-	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA	NA
AWA62443.1|1918948_1919701_-	zinc ABC transporter ATP-binding protein ZnuC	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	32.4	6.7e-15
AWA62444.1|1919779_1920724_+	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA	NA
AWA62445.1|1920739_1922059_+	murein DD-endopeptidase MepM	NA	A8ATH6	Listeria_phage	38.2	5.3e-15
AWA62446.1|1922176_1923151_+	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA	NA
AWA62447.1|1923191_1924634_-	pyruvate kinase	NA	NA	NA	NA	NA
AWA65513.1|1924759_1925629_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AWA62448.1|1925664_1925853_-	hypothetical protein	NA	NA	NA	NA	NA
AWA62449.1|1925824_1925974_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
AWA62450.1|1925984_1927460_+	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	36.8	3.2e-77
AWA62451.1|1927682_1929494_+	phosphogluconate dehydratase	NA	NA	NA	NA	NA
AWA62452.1|1929532_1930174_+	keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase	NA	NA	NA	NA	NA
AWA62453.1|1930231_1931410_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
AWA62454.1|1931554_1931902_+	LexA family transcriptional regulator	NA	NA	NA	NA	NA
AWA62455.1|1932041_1932701_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
AWA62456.1|1932821_1934882_+	oligopeptidase B	NA	NA	NA	NA	NA
AWA62457.1|1934885_1935545_-	exodeoxyribonuclease X	NA	A0A0H4IT92	Pseudoalteromonas_phage	31.2	4.9e-14
AWA62458.1|1935623_1935854_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	57.4	5.9e-15
AWA62459.1|1935966_1936341_+	CopC domain-containing protein YobA	NA	NA	NA	NA	NA
AWA62460.1|1936344_1937214_+	hypothetical protein	NA	NA	NA	NA	NA
AWA65514.1|1937227_1937569_+	DUF2511 domain-containing protein	NA	NA	NA	NA	NA
AWA65515.2|1938453_1939458_-	DUF535 domain-containing protein	NA	NA	NA	NA	NA
AWA62461.1|1939578_1940232_+	protein-serine/threonine phosphatase	NA	A0A222YWF0	Escherichia_phage	50.2	3.0e-56
AWA62462.1|1940228_1940420_-	DUF1482 family protein	NA	NA	NA	NA	NA
AWA62463.1|1940517_1940757_-	DUF1480 family protein	NA	NA	NA	NA	NA
AWA62464.1|1940872_1942306_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA	NA
AWA62465.1|1942429_1945063_-	PqiB family protein	NA	NA	NA	NA	NA
AWA62466.1|1945031_1946315_-	paraquat-inducible protein A	NA	NA	NA	NA	NA
AWA62467.1|1946447_1946945_+	GAF domain-containing protein	NA	NA	NA	NA	NA
AWA62468.1|1947042_1947720_+	RNA chaperone ProQ	NA	NA	NA	NA	NA
AWA62469.1|1947739_1949788_+	carboxy terminal-processing peptidase	NA	A0A0R6PIZ1	Moraxella_phage	33.3	3.0e-86
AWA62470.1|1950022_1950907_+|protease	protease HtpX	protease	NA	NA	NA	NA
>prophage 6
CP028787	Klebsiella pneumoniae strain SCKP020049 chromosome, complete genome	5256586	2709447	2720335	5256586		Escherichia_phage(87.5%)	9	NA	NA
AWA63185.1|2709447_2712555_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.6	0.0e+00
AWA63186.1|2713905_2714994_-	chromosome segregation protein SMC	NA	A0A077SLJ9	Escherichia_phage	99.4	2.0e-209
AWA63187.1|2715080_2715341_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	98.8	5.4e-41
AWA63188.1|2715638_2716499_+	class A extended-spectrum beta-lactamase SHV-5	NA	A0A077SL40	Escherichia_phage	99.7	4.4e-156
AWA63189.1|2716519_2717281_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
AWA63190.1|2717271_2717505_+	hypothetical protein	NA	NA	NA	NA	NA
AWA63191.1|2717542_2718445_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	98.7	1.4e-157
AWA63192.1|2718456_2719722_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.0	1.5e-232
AWA63193.1|2719714_2720335_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 7
CP028787	Klebsiella pneumoniae strain SCKP020049 chromosome, complete genome	5256586	3104732	3187445	5256586	capsid,head,holin,tail,integrase,tRNA,portal,terminase	Klebsiella_phage(43.48%)	96	3131547:3131561	3185256:3185270
AWA63549.1|3104732_3105233_+|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
AWA63550.1|3105349_3105796_+	DUF441 domain-containing protein	NA	NA	NA	NA	NA
AWA65565.1|3105779_3106571_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AWA63551.1|3106672_3107857_+	cyanate MFS transporter	NA	NA	NA	NA	NA
AWA63552.1|3107888_3108581_-	hypothetical protein	NA	NA	NA	NA	NA
AWA63553.1|3108726_3109236_+	DUF523 domain-containing protein	NA	NA	NA	NA	NA
AWA63554.1|3109222_3109579_+	DUF488 domain-containing protein	NA	NA	NA	NA	NA
AWA63555.1|3109568_3109808_-	DUF333 domain-containing protein	NA	NA	NA	NA	NA
AWA63556.1|3110109_3111123_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	29.5	1.7e-13
AWA63557.1|3111180_3111282_+	hypothetical protein	NA	NA	NA	NA	NA
AWA65566.1|3111281_3111356_+	protein YoaJ	NA	NA	NA	NA	NA
AWA63558.1|3111473_3111599_+	hypothetical protein	NA	NA	NA	NA	NA
AWA63559.1|3111658_3111922_-	DUF2534 family protein	NA	NA	NA	NA	NA
AWA63560.1|3112052_3112691_-	leucine efflux protein	NA	NA	NA	NA	NA
AWA63561.1|3112780_3113695_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	50.4	1.5e-72
AWA63562.1|3113910_3114102_+	hypothetical protein	NA	NA	NA	NA	NA
AWA63563.1|3114356_3115400_-	type II asparaginase	NA	NA	NA	NA	NA
AWA63564.1|3115702_3116911_+	HD domain-containing protein	NA	NA	NA	NA	NA
AWA63565.1|3116983_3118768_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	38.5	3.4e-17
AWA63566.1|3118774_3119665_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AWA63567.1|3119785_3121294_+	UbiD family decarboxylase	NA	NA	NA	NA	NA
AWA63568.1|3121604_3122291_-	EAL domain-containing protein	NA	NA	NA	NA	NA
AWA63569.1|3122688_3122868_-	hypothetical protein	NA	NA	NA	NA	NA
AWA63570.1|3122907_3123540_-	DNA-binding protein	NA	NA	NA	NA	NA
AWA63571.1|3124106_3124304_+	hypothetical protein	NA	NA	NA	NA	NA
AWA63572.1|3124419_3125430_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AWA63573.1|3125426_3126833_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AWA63574.1|3126888_3127776_-	manganese catalase family protein	NA	NA	NA	NA	NA
AWA63575.1|3127792_3128299_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
AWA63576.1|3128325_3128820_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
AWA63577.1|3128910_3129096_-	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA	NA
AWA63578.1|3129717_3130911_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA	NA
AWA63579.1|3131023_3131251_+	DUF1272 domain-containing protein	NA	NA	NA	NA	NA
AWA63580.1|3131271_3131457_-	hypothetical protein	NA	NA	NA	NA	NA
3131547:3131561	attL	TGGCTGGCGTTCTTT	NA	NA	NA	NA
AWA63581.1|3131700_3132024_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AWA63582.1|3132016_3132409_+	amino acid-binding protein	NA	NA	NA	NA	NA
AWA63583.1|3132405_3133119_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AWA63584.1|3133391_3133544_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.0	3.8e-18
AWA63585.1|3133697_3135194_-|tail	tail fiber domain-containing protein	tail	A0A0P0IDN1	Klebsiella_phage	69.6	2.5e-138
AWA63586.1|3135255_3146472_-	DUF1983 domain-containing protein	NA	Q6UAW1	Klebsiella_phage	50.5	0.0e+00
AWA63587.1|3146534_3147128_-|tail	tail assembly protein	tail	K7PHE5	Enterobacteria_phage	77.2	1.8e-79
AWA63588.1|3147154_3147577_-	hypothetical protein	NA	J9Q806	Salmonella_phage	49.3	2.9e-28
AWA63589.1|3147618_3148329_-	peptidase P60	NA	Q6UAW4	Klebsiella_phage	91.1	3.8e-137
AWA63590.1|3148330_3149086_-|tail	phage minor tail protein L	tail	Q6UAW5	Klebsiella_phage	80.5	1.4e-124
AWA63591.1|3149082_3149421_-|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	88.4	2.4e-57
AWA63592.1|3149420_3152777_-|tail	phage tail tape measure protein	tail	Q6UAW7	Klebsiella_phage	87.8	0.0e+00
AWA63593.1|3152776_3152989_-	hypothetical protein	NA	Q6UAW9	Klebsiella_phage	88.9	3.7e-32
AWA63594.1|3153009_3153375_-|tail	phage tail protein	tail	Q6UAW8	Klebsiella_phage	89.3	1.6e-51
AWA63595.1|3153432_3153894_-|tail	phage tail protein	tail	Q6UAX0	Klebsiella_phage	83.7	7.8e-67
AWA63596.1|3153925_3154327_-	hypothetical protein	NA	Q6UAX1	Klebsiella_phage	93.2	1.1e-61
AWA63597.1|3154323_3154713_-	hypothetical protein	NA	Q6UAX2	Klebsiella_phage	84.5	4.0e-56
AWA63598.1|3154693_3155032_-|head,tail	head-tail adaptor protein	head,tail	Q6UAX3	Klebsiella_phage	91.1	5.6e-54
AWA63599.1|3155028_3155346_-|head,tail	phage gp6-like head-tail connector protein	head,tail	Q6UAX4	Klebsiella_phage	89.8	1.5e-45
AWA63600.1|3155326_3155587_-	hypothetical protein	NA	Q6UAX5	Klebsiella_phage	63.9	1.5e-22
AWA63601.1|3155645_3156932_-|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	89.3	5.7e-216
AWA63602.1|3157009_3157930_-	S49 family peptidase	NA	Q6UAX7	Klebsiella_phage	88.2	1.6e-148
AWA63603.1|3157966_3159226_-|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	89.8	2.3e-222
AWA63604.1|3159225_3159405_-	hypothetical protein	NA	Q6UAX9	Klebsiella_phage	57.6	3.1e-11
AWA63605.1|3159398_3161120_-|terminase	terminase large subunit	terminase	Q7Y413	Yersinia_phage	57.4	1.9e-190
AWA63606.1|3161119_3161554_-|terminase	phage terminase small subunit P27 family	terminase	A0A1J0GV10	Halomonas_phage	61.9	9.4e-30
AWA63607.1|3161803_3162235_-	hypothetical protein	NA	Q6UAS0	Klebsiella_phage	61.3	1.8e-41
AWA63608.1|3162231_3162549_-	hypothetical protein	NA	NA	NA	NA	NA
AWA63609.1|3162500_3162863_-	HNH endonuclease	NA	Q6UAS2	Klebsiella_phage	81.7	3.4e-57
AWA63610.1|3163016_3163238_-	DNA gyrase subunit B	NA	NA	NA	NA	NA
AWA63611.1|3163344_3163533_-	hypothetical protein	NA	NA	NA	NA	NA
AWA63612.1|3164612_3164963_-	hypothetical protein	NA	R9TPM9	Aeromonas_phage	39.8	1.8e-10
AWA63613.1|3164959_3165457_-	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	85.8	1.9e-79
AWA63614.1|3165456_3165672_-|holin	holin	holin	A5LH82	Enterobacteria_phage	87.3	7.9e-30
AWA63615.1|3167095_3167698_-	hypothetical protein	NA	H9C175	Pectobacterium_phage	68.1	2.4e-76
AWA63616.1|3167714_3168746_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	49.6	6.2e-96
AWA63617.1|3168745_3168949_-	hypothetical protein	NA	NA	NA	NA	NA
AWA63618.1|3168945_3169338_-	DNA-binding protein	NA	K7PHB4	Enterobacterial_phage	36.6	1.0e-11
AWA63619.1|3169378_3169669_-	hypothetical protein	NA	H6WRY6	Salmonella_phage	56.9	1.4e-16
AWA63620.1|3169680_3169914_-	DinI family protein	NA	K7PM44	Enterobacteria_phage	72.4	1.3e-25
AWA63621.1|3170539_3171517_+	thymidylate synthase	NA	A0A1G5SB41	Enterococcus_phage	31.5	1.1e-22
AWA63622.1|3171516_3172461_+	hypothetical protein	NA	NA	NA	NA	NA
AWA63623.1|3172463_3173546_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A075BTZ7	Microcystis_phage	38.6	2.1e-09
AWA63624.1|3173542_3173869_-	killer suppression protein HigA	NA	NA	NA	NA	NA
AWA63625.1|3174014_3174281_+	hypothetical protein	NA	A0A2C9CX56	Yersinia_phage	70.7	8.6e-26
AWA63626.1|3174281_3174533_-	hypothetical protein	NA	NA	NA	NA	NA
AWA63627.1|3175228_3175669_-	PerC family transcriptional regulator	NA	NA	NA	NA	NA
AWA65567.1|3175682_3176147_-	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	68.9	1.7e-61
AWA63628.1|3176139_3177123_-	hypothetical protein	NA	A0A0U2RT81	Escherichia_phage	55.8	2.4e-44
AWA63629.1|3177174_3177729_-	hypothetical protein	NA	NA	NA	NA	NA
AWA63630.1|3177731_3177947_-	Rha family transcriptional regulator	NA	A0A0M4QX15	Salmonella_phage	57.5	2.0e-17
AWA63631.1|3178048_3178438_+	helix-turn-helix domain-containing protein	NA	A0A0M4R5D1	Salmonella_phage	60.2	6.7e-35
AWA63632.1|3179052_3179271_+	hypothetical protein	NA	NA	NA	NA	NA
AWA63633.1|3179280_3179475_+	DUF1482 family protein	NA	NA	NA	NA	NA
AWA63634.1|3179517_3179862_+	transcriptional regulator	NA	NA	NA	NA	NA
AWA63635.1|3180003_3182142_+	exonuclease	NA	S4TNL0	Salmonella_phage	42.9	1.9e-99
AWA63636.1|3182194_3182440_+	excisionase	NA	NA	NA	NA	NA
AWA63637.1|3182420_3183548_+|integrase	integrase	integrase	O21925	Phage_21	58.4	3.3e-119
AWA63638.1|3183665_3184916_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
AWA63639.1|3185156_3185807_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
3185256:3185270	attR	AAAGAACGCCAGCCA	NA	NA	NA	NA
AWA63640.1|3185823_3186282_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AWA65568.1|3186338_3187445_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
>prophage 8
CP028787	Klebsiella pneumoniae strain SCKP020049 chromosome, complete genome	5256586	3424427	3433891	5256586	tRNA,protease	Brazilian_cedratvirus(16.67%)	9	NA	NA
AWA63847.1|3424427_3426149_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
AWA63848.1|3426193_3426895_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
AWA63849.1|3427248_3427467_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
AWA63850.1|3427587_3429867_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
AWA63851.1|3429897_3430215_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
AWA63852.1|3430540_3430762_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
AWA63853.1|3430716_3430899_-	hypothetical protein	NA	NA	NA	NA	NA
AWA63854.1|3430838_3432779_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	7.2e-37
AWA63855.1|3432775_3433891_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
>prophage 9
CP028787	Klebsiella pneumoniae strain SCKP020049 chromosome, complete genome	5256586	4610765	4622797	5256586		Enterobacteria_phage(71.43%)	11	NA	NA
AWA64876.1|4610765_4612031_-	DUF4102 domain-containing protein	NA	B7SYF8	Stenotrophomonas_phage	40.3	5.8e-80
AWA64877.1|4612773_4615107_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	83.7	0.0e+00
AWA64878.1|4615120_4615441_-	hypothetical protein	NA	NA	NA	NA	NA
AWA64879.1|4615437_4615665_-	hypothetical protein	NA	NA	NA	NA	NA
AWA64880.1|4615661_4616213_-	host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	66.7	4.9e-31
AWA64881.1|4617036_4617774_+	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	60.1	1.9e-70
AWA64882.1|4617770_4618016_+	hypothetical protein	NA	Q7M294	Enterobacteria_phage	59.3	5.0e-20
AWA64883.1|4618033_4618600_+	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	64.9	3.9e-60
AWA64884.1|4618665_4618881_+	hypothetical protein	NA	NA	NA	NA	NA
AWA64885.1|4618996_4621405_-	hypothetical protein	NA	NA	NA	NA	NA
AWA64886.1|4621525_4622797_-	DUF4102 domain-containing protein	NA	B7SYF8	Stenotrophomonas_phage	40.7	3.1e-73
>prophage 1
CP028784	Klebsiella pneumoniae strain SCKP020049 plasmid p1_020049, complete sequence	182097	1727	61239	182097	integrase,transposase	uncultured_Caudovirales_phage(29.41%)	56	NA	NA
AWA60411.1|1727_2468_-|integrase	site-specific integrase	integrase	I3WFA4	Macacine_betaherpesvirus	58.6	5.4e-25
AWA60412.1|3379_3607_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60413.1|3654_4635_-|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.1	2.3e-185
AWA60414.1|4954_6391_+	EAL domain-containing protein	NA	NA	NA	NA	NA
AWA60415.1|7373_8651_-	DUF2254 domain-containing protein	NA	NA	NA	NA	NA
AWA60416.1|8713_10717_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	25.9	9.7e-21
AWA60575.1|11750_12958_-|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	63.2	1.7e-100
AWA60417.1|14386_14818_-	silver-binding protein SilE	NA	NA	NA	NA	NA
AWA60418.1|15068_16544_-	Cu(+)/Ag(+) sensor histidine kinase	NA	W8CYF6	Bacillus_phage	30.1	1.0e-27
AWA60419.1|16536_17217_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	35.6	2.1e-31
AWA60420.1|17406_18792_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
AWA60421.1|18820_19174_+	copper ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AWA60422.1|19287_20580_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AWA60423.1|20590_23737_+	CusA/CzcA family heavy metal efflux RND transporter	NA	S5VTK5	Leptospira_phage	22.5	4.0e-61
AWA60424.1|23823_24264_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60425.1|24390_26838_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	35.8	7.6e-84
AWA60426.1|26878_27076_+	DUF2933 domain-containing protein	NA	NA	NA	NA	NA
AWA60427.1|27109_27847_-	peptidase M23	NA	A0A2H4JAF5	uncultured_Caudovirales_phage	32.5	1.2e-11
AWA60428.1|28135_28585_-	copper resistance protein	NA	NA	NA	NA	NA
AWA60429.1|28818_30636_+	multicopper oxidase PcoA	NA	NA	NA	NA	NA
AWA60430.1|30635_31532_+	copper resistance protein B	NA	NA	NA	NA	NA
AWA60431.1|31571_31952_+	copper resistance system chaperone PcoC	NA	NA	NA	NA	NA
AWA60432.1|31956_32886_+	copper resistance protein D	NA	NA	NA	NA	NA
AWA60433.1|32940_33621_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	34.4	8.7e-30
AWA60434.1|33617_35018_+	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	26.3	4.1e-18
AWA60435.1|35234_35669_+	copper-binding protein	NA	NA	NA	NA	NA
AWA60576.1|35900_36080_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
AWA60436.1|37822_38332_+	porin	NA	NA	NA	NA	NA
AWA60577.1|38381_38879_-	N-acetyltransferase	NA	NA	NA	NA	NA
AWA60437.1|39210_39537_+	transcriptional regulator	NA	NA	NA	NA	NA
AWA60578.1|39536_40247_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	77.0	2.9e-92
AWA60438.1|40255_40801_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
AWA60439.1|40876_41239_+	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA	NA
AWA60440.1|43135_43672_+	N-acetyltransferase	NA	NA	NA	NA	NA
AWA60441.1|43704_44130_-	arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	72.9	2.3e-52
AWA60442.1|44142_45432_-	arsenical efflux pump membrane protein ArsB	NA	A0A2H4J144	uncultured_Caudovirales_phage	74.0	1.9e-171
AWA60443.1|45479_47231_-	arsenical pump-driving ATPase	NA	NA	NA	NA	NA
AWA60444.1|47248_47611_-	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA	NA
AWA60445.1|47660_48011_-	transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	50.9	1.4e-23
AWA60446.1|48368_48638_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60447.1|48625_49201_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60448.1|49231_49726_+	DNA-binding protein	NA	NA	NA	NA	NA
AWA60449.1|49769_50138_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60450.1|50171_50375_+	hemolysin expression modulator Hha	NA	NA	NA	NA	NA
AWA60451.1|50423_50681_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60452.1|50710_50899_-	hypothetical protein	NA	NA	NA	NA	NA
AWA60453.1|50897_51878_+|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
AWA60579.2|52001_52211_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60455.1|52386_52653_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
AWA60456.1|52640_53123_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AWA60457.1|53323_54727_+|transposase	ISNCY-like element ISKpn21 family transposase	transposase	NA	NA	NA	NA
AWA60580.1|54755_55388_-	hypothetical protein	NA	NA	NA	NA	NA
AWA60458.1|55606_57010_+|transposase	ISNCY-like element ISKpn21 family transposase	transposase	NA	NA	NA	NA
AWA60581.1|57038_57671_-	hypothetical protein	NA	NA	NA	NA	NA
AWA60582.1|57900_59247_+|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
AWA60459.1|60534_61239_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
>prophage 2
CP028784	Klebsiella pneumoniae strain SCKP020049 plasmid p1_020049, complete sequence	182097	83636	117740	182097	integrase,transposase,bacteriocin	Bacillus_virus(16.67%)	29	79986:80003	120772:120789
79986:80003	attL	CCACCTGTTGAATCGCCT	NA	NA	NA	NA
AWA60479.1|83636_83804_-|integrase	integrase	integrase	NA	NA	NA	NA
AWA60480.1|84906_85428_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
AWA60481.1|85424_86378_+	fec operon regulator FecR	NA	NA	NA	NA	NA
AWA60482.1|86463_88788_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AWA60483.1|88832_89735_+	Fe(3+)-dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA	NA
AWA60484.1|89731_90730_+	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA	NA
AWA60485.1|90726_91683_+	iron-dicitrate ABC transporter permease FecD	NA	NA	NA	NA	NA
AWA60486.1|91683_92451_+	iron-dicitrate ABC transporter ATP-binding subunit	NA	G3M9Y6	Bacillus_virus	25.2	9.8e-14
AWA60487.1|92549_92843_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	96.9	2.7e-49
AWA60584.1|93173_93416_-	EAL domain-containing protein	NA	NA	NA	NA	NA
AWA60488.1|93713_94718_-|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
AWA60489.1|95121_96132_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
AWA60490.1|96154_96370_-	hypothetical protein	NA	NA	NA	NA	NA
AWA60491.1|96592_97675_+	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	96.4	6.8e-186
AWA60492.1|97796_100871_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	96.7	0.0e+00
AWA60493.1|100922_102176_+	MFS transporter	NA	NA	NA	NA	NA
AWA60494.1|102312_103236_+|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	99.7	1.4e-176
AWA60495.1|103880_106190_+	ATPase	NA	NA	NA	NA	NA
AWA60496.1|106193_107510_+	ATP-binding protein	NA	NA	NA	NA	NA
AWA60497.1|107506_109702_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
AWA60585.1|110323_110512_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60498.1|110655_110844_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60499.1|111148_112006_-	incFII family plasmid replication initiator RepA	NA	NA	NA	NA	NA
AWA60586.1|111998_112076_-	RepA leader peptide Tap	NA	NA	NA	NA	NA
AWA60500.1|112292_112571_-	replication regulatory protein RepA	NA	NA	NA	NA	NA
AWA60587.1|112891_113443_-	phospholipase D family protein	NA	A0A1B2LRT6	Wolbachia_phage	35.2	1.1e-19
AWA60501.1|113711_113990_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AWA60502.1|113991_116313_-|bacteriocin	klebicin B-related nuclease bacteriocin	bacteriocin	NA	NA	NA	NA
AWA60503.1|116519_117740_+|transposase	ISL3-like element ISKox3 family transposase	transposase	NA	NA	NA	NA
120772:120789	attR	CCACCTGTTGAATCGCCT	NA	NA	NA	NA
>prophage 1
CP028786	Klebsiella pneumoniae strain SCKP020049 plasmid pNDM1_020049, complete sequence	54035	0	36370	54035	transposase,coat	Escherichia_phage(50.0%)	45	NA	NA
AWA60645.1|758_1214_+	DNA-binding protein	NA	NA	NA	NA	NA
AWA60646.1|1251_1902_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA	NA
AWA60647.1|2174_2354_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60648.1|2350_3172_+	sprT domain-containing protein	NA	NA	NA	NA	NA
AWA60649.1|3281_3536_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60650.1|3553_3829_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60664.1|3891_4104_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60651.1|4061_4247_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60652.1|10043_11060_+|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.7	9.8e-187
AWA60653.1|11473_12286_+	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA	NA
AWA60654.1|12289_12655_+	bleomycin binding protein Ble-MBL	NA	NA	NA	NA	NA
AWA60655.1|12659_13298_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
AWA60656.1|13308_14340_-	twin-arginine translocation (TAT) pathway signal sequence domain protein	NA	NA	NA	NA	NA
AWA60657.1|14344_14674_-	divalent-cation tolerance protein CutA	NA	NA	NA	NA	NA
AWA60658.1|14867_15158_+	co-chaperone GroES	NA	A0A221S322	uncultured_virus	47.8	2.1e-17
AWA60600.1|15213_16854_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	62.1	8.2e-175
AWA60601.1|17042_18572_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
AWA60602.1|18532_18727_-	hypothetical protein	NA	NA	NA	NA	NA
AWA60659.1|18782_19058_-	hypothetical protein	NA	NA	NA	NA	NA
AWA60603.1|19087_19792_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AWA60604.1|19782_19965_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60605.1|19928_20789_+	class A extended-spectrum beta-lactamase SHV-12	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
AWA60606.1|20809_21571_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
AWA60607.1|21561_21795_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60608.1|22411_23116_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
AWA60609.1|23149_23506_-	sOS mutagenesis and repair protein UmuD	NA	A0A222YZE2	Escherichia_phage	46.6	5.5e-20
AWA60610.1|23508_23748_-	DNA polymerase V	NA	I6PD82	Cronobacter_phage	55.1	4.4e-21
AWA60611.1|23849_25070_+|transposase	ISL3-like element ISKox3 family transposase	transposase	NA	NA	NA	NA
AWA60660.1|25158_25821_-	resolvase	NA	M9Q1K0	Clostridium_phage	29.1	9.7e-10
AWA60612.1|26201_26864_+	peptidyl-arginine deiminase	NA	E5FFJ3	Burkholderia_phage	25.2	2.6e-07
AWA60613.1|26963_27248_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
AWA60614.1|27453_27765_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60615.1|27800_28085_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60661.1|28105_28459_-	DNA distortion polypeptide 3	NA	NA	NA	NA	NA
AWA60662.1|28646_29090_-	hypothetical protein	NA	NA	NA	NA	NA
AWA60616.1|29098_30112_-	RepB family plasmid replication initiator protein	NA	NA	NA	NA	NA
AWA60617.1|31464_31980_+	molecular chaperone DnaJ	NA	A0A2K9L588	Tupanvirus	39.8	3.3e-05
AWA60618.1|32038_32275_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60619.1|32334_32886_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60620.1|32951_33164_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60621.1|33153_33396_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60622.1|33489_33828_+	hypothetical protein	NA	NA	NA	NA	NA
AWA60623.1|34201_34417_-	hypothetical protein	NA	NA	NA	NA	NA
AWA60663.1|34661_35207_+	DNA distortion polypeptide 1	NA	NA	NA	NA	NA
AWA60624.1|35209_36370_+|coat	spore coat protein CotH	coat	NA	NA	NA	NA
>prophage 2
CP028786	Klebsiella pneumoniae strain SCKP020049 plasmid pNDM1_020049, complete sequence	54035	50611	52451	54035		Moraxella_phage(50.0%)	2	NA	NA
AWA60642.1|50611_51106_+	micrococcal nuclease	NA	A0A0R6PHV6	Moraxella_phage	37.3	8.0e-17
AWA60643.1|51188_52451_+	ATP-binding protein	NA	A0A1V0SKF8	Klosneuvirus	31.4	1.3e-07
