The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025223	Enterococcus sp. CR-Ec1 chromosome, complete genome	3819143	1012325	1072712	3819143	capsid,tRNA,head,protease,terminase,tail,holin,portal,integrase	Lactococcus_phage(18.18%)	71	1033620:1033639	1075387:1075406
AUJ84801.1|1012325_1013072_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AUJ84802.1|1013238_1013586_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
AUJ84803.1|1014357_1015371_+	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	26.9	2.4e-28
AUJ87315.1|1015433_1016192_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AUJ84804.1|1016459_1016864_+	glyoxalase	NA	NA	NA	NA	NA
AUJ84805.1|1017055_1017487_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
AUJ84806.1|1017617_1018268_+	NADH-flavin reductase	NA	NA	NA	NA	NA
AUJ84807.1|1018434_1018896_+	GAF protein	NA	NA	NA	NA	NA
AUJ84808.1|1019077_1019305_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84809.1|1019473_1020247_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84810.1|1020321_1020657_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AUJ84811.1|1020727_1020976_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84812.1|1021378_1023040_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUJ84813.1|1023222_1024296_+	dipeptide epimerase	NA	NA	NA	NA	NA
AUJ84814.1|1024302_1025229_+	NlpC/P60 family protein	NA	A0A0A8WIF2	Clostridium_phage	37.3	1.1e-14
AUJ84815.1|1025265_1026033_+	serine hydrolase	NA	NA	NA	NA	NA
AUJ84816.1|1026082_1026784_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AUJ84817.1|1026954_1028259_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
AUJ84818.1|1028274_1029690_+	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	27.1	2.8e-38
AUJ84819.1|1029743_1030844_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
AUJ84820.1|1031513_1032572_-	transcriptional regulator	NA	NA	NA	NA	NA
AUJ84821.1|1032616_1033447_-	acyltransferase	NA	NA	NA	NA	NA
1033620:1033639	attL	ATGGAGATGGCGGGAGTCGA	NA	NA	NA	NA
AUJ84822.1|1033696_1034833_-|integrase	site-specific integrase	integrase	A5GYP9	Lactococcus_phage	43.2	5.1e-75
AUJ84823.1|1034932_1035529_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ87316.1|1035621_1036026_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
AUJ84824.1|1036041_1036353_-	transcriptional regulator	NA	M1I9X0	Streptococcus_phage	48.1	1.0e-22
AUJ84825.1|1036643_1036847_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84826.1|1036862_1037096_+	DNA-binding protein	NA	NA	NA	NA	NA
AUJ84827.1|1037100_1037295_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84828.1|1037718_1037943_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84829.1|1037954_1038149_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84830.1|1038151_1039168_+	RecT protein	NA	A0A1S5SAA8	Streptococcus_phage	44.1	2.1e-59
AUJ84831.1|1039130_1039961_+	hypothetical protein	NA	E9LUM4	Lactobacillus_phage	46.0	1.4e-61
AUJ84832.1|1039974_1040769_+	hypothetical protein	NA	A8ATY7	Listeria_phage	55.4	9.8e-33
AUJ84833.1|1040782_1041622_+	DNA replication protein DnaC	NA	Q9AZP7	Lactococcus_phage	33.8	7.4e-23
AUJ84834.1|1041625_1042087_+	hypothetical protein	NA	A0A1P8BKR1	Lactococcus_phage	44.7	7.4e-17
AUJ84835.1|1042086_1042293_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84836.1|1042314_1042911_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84837.1|1042897_1043092_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84838.1|1043233_1043422_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84839.1|1043460_1044699_+	DNA (cytosine-5-)-methyltransferase	NA	A0A141E1L1	Streptococcus_phage	68.2	1.7e-156
AUJ84840.1|1044700_1045489_+	DNA methyltransferase	NA	Q24LC8	Clostridium_phage	44.0	1.3e-61
AUJ84841.1|1045787_1046273_+	hypothetical protein	NA	C9E2P0	Enterococcus_phage	85.3	5.3e-74
AUJ84842.1|1046262_1046463_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84843.1|1046626_1047097_+	hypothetical protein	NA	A0A2H4JFW6	uncultured_Caudovirales_phage	45.2	1.1e-23
AUJ84844.1|1047440_1047680_+	hypothetical protein	NA	A0A1X9I5F0	Streptococcus_phage	42.7	9.5e-08
AUJ87317.1|1047951_1048626_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84845.1|1048699_1049029_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84846.1|1049025_1049340_+	HNH endonuclease	NA	A0A1S5SFB3	Streptococcus_phage	56.0	2.7e-26
AUJ87318.1|1049521_1049833_+|terminase	terminase	terminase	D2XR14	Bacillus_phage	40.4	6.3e-12
AUJ84847.1|1049829_1051512_+|terminase	terminase	terminase	D2XR15	Bacillus_phage	70.2	1.3e-231
AUJ84848.1|1051715_1052885_+|portal	phage portal protein	portal	A0A059T6F0	Listeria_phage	41.5	5.6e-85
AUJ84849.1|1052871_1053576_+|protease	Clp protease	protease	A0A2H4J8Y7	uncultured_Caudovirales_phage	46.6	5.6e-48
AUJ84850.1|1053579_1054761_+|capsid	phage major capsid protein	capsid	D2XR18	Bacillus_phage	39.1	4.5e-66
AUJ84851.1|1054778_1054901_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84852.1|1054904_1055183_+	hypothetical protein	NA	A0A2H4J447	uncultured_Caudovirales_phage	45.3	1.6e-11
AUJ84853.1|1055163_1055544_+|head,tail	phage head-tail adapter protein	head,tail	A8ATA1	Listeria_phage	47.1	1.6e-25
AUJ84854.1|1055540_1055939_+	hypothetical protein	NA	A0A2P0ZLD7	Lactobacillus_phage	47.3	3.4e-26
AUJ84855.1|1055935_1056331_+	hypothetical protein	NA	A8ATA3	Listeria_phage	40.8	2.2e-17
AUJ84856.1|1056364_1056973_+|tail	phage tail protein	tail	A8ATA4	Listeria_phage	40.9	5.2e-26
AUJ84857.1|1057035_1057413_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ87319.1|1057644_1061943_+|tail	phage tail tape measure protein	tail	M1PKM6	Streptococcus_phage	35.9	4.9e-102
AUJ84858.1|1061939_1063454_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84859.1|1063450_1066042_+	hypothetical protein	NA	A0A249XUR9	Enterococcus_phage	24.4	6.1e-15
AUJ84860.1|1066053_1069230_+	hypothetical protein	NA	Q38319	Lactococcus_phage	29.4	7.7e-28
AUJ84861.1|1069193_1069520_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84862.1|1069768_1070233_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ84863.1|1070244_1070490_+|holin	holin	holin	A0A1U9WRD5	Streptococcus_virus	49.3	4.7e-10
AUJ87320.1|1070527_1071310_+|holin	phage holin	holin	A0A1P8BKR7	Lactococcus_phage	77.0	1.4e-92
AUJ84864.1|1071355_1071736_+	transcriptional regulator	NA	C9E2L2	Enterococcus_phage	48.4	1.1e-26
AUJ84865.1|1071824_1072712_+	hypothetical protein	NA	A0A1P8BLQ4	Lactococcus_phage	54.2	8.1e-36
1075387:1075406	attR	ATGGAGATGGCGGGAGTCGA	NA	NA	NA	NA
>prophage 2
CP025223	Enterococcus sp. CR-Ec1 chromosome, complete genome	3819143	1723736	1774893	3819143	capsid,tRNA,tail,integrase	Streptococcus_phage(34.78%)	55	1715129:1715144	1752315:1752330
1715129:1715144	attL	TAAAAGGAGATTCGAT	NA	NA	NA	NA
AUJ85424.1|1723736_1724783_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	30.1	1.9e-28
AUJ85425.1|1724783_1727204_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AUJ85426.1|1727605_1728613_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
AUJ85427.1|1728880_1729618_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.2	2.6e-32
AUJ85428.1|1729636_1730446_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUJ85429.1|1730457_1731105_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AUJ85430.1|1731122_1731779_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AUJ85431.1|1732009_1732825_+	glutamate racemase	NA	NA	NA	NA	NA
AUJ85432.1|1732825_1734178_+	ribonuclease PH	NA	A0A0P0A2L0	Cassava_brown_streak_virus	33.3	3.7e-16
AUJ85433.1|1734174_1734687_+	metallophosphoesterase	NA	NA	NA	NA	NA
AUJ85434.1|1734796_1735300_+	CBS domain-containing protein	NA	NA	NA	NA	NA
AUJ85435.1|1735334_1736252_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AUJ85436.1|1736399_1737155_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AUJ85437.1|1737361_1737802_+	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ	NA	NA	NA	NA	NA
AUJ85438.1|1737930_1739169_-|integrase	site-specific integrase	integrase	A0A0P0I3D2	Lactobacillus_phage	38.9	3.1e-70
AUJ85439.1|1739300_1740629_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85440.1|1740794_1741550_-	toxin-antitoxin system, toxin component domain protein	NA	A0A0A0YSF3	Streptococcus_phage	30.5	3.8e-18
AUJ85441.1|1741562_1741919_-	XRE family transcriptional regulator	NA	A0A1S5SC02	Streptococcus_phage	48.8	1.8e-23
AUJ85442.1|1742225_1742396_+	transcriptional regulator	NA	NA	NA	NA	NA
AUJ87340.1|1742424_1742667_+	DNA-binding protein	NA	NA	NA	NA	NA
AUJ85443.1|1742686_1742908_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85444.1|1742912_1743671_+	phage antirepressor Ant	NA	A0A2D1GPQ2	Lactobacillus_phage	50.8	2.5e-62
AUJ85445.1|1743681_1743870_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85446.1|1744034_1744223_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85447.1|1744219_1744921_+	Erf family protein	NA	Q6JM07	Lactococcus_phage	56.9	1.5e-32
AUJ85448.1|1744924_1745839_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85449.1|1745838_1746549_+	hypothetical protein	NA	U5U4M2	Lactobacillus_phage	27.5	1.6e-13
AUJ85450.1|1746552_1747410_+	replication protein	NA	J7KBV5	Streptococcus_phage	67.1	2.9e-46
AUJ85451.1|1747381_1747714_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85452.1|1747694_1748003_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85453.1|1748228_1748552_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85454.1|1748925_1749423_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85455.1|1749560_1749773_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85456.1|1749793_1749994_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85457.1|1750319_1750520_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85458.1|1752796_1753288_+	hypothetical protein	NA	D2IZZ3	Enterococcus_phage	36.2	9.1e-13
1752315:1752330	attR	TAAAAGGAGATTCGAT	NA	NA	NA	NA
AUJ85459.1|1753894_1754089_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85460.1|1755242_1755452_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85461.1|1756108_1756948_+	TerS	NA	D7RWI2	Brochothrix_phage	39.9	2.3e-32
AUJ85462.1|1758231_1759770_+|capsid	phage capsid protein	capsid	Q5YA75	Bacillus_phage	39.8	2.5e-93
AUJ85463.1|1759774_1760923_+|capsid	phage capsid protein	capsid	U3PFU0	Lactobacillus_phage	35.7	1.2e-52
AUJ85464.1|1760956_1761250_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85465.1|1761460_1762051_+	hypothetical protein	NA	D2J060	Enterococcus_phage	36.5	2.8e-16
AUJ85466.1|1762064_1762952_+|capsid	capsid protein	capsid	U3PDP8	Lactobacillus_phage	46.6	5.7e-66
AUJ85467.1|1763008_1763113_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85468.1|1763142_1763595_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ87341.1|1763597_1763936_+|capsid	minor capsid protein	capsid	NA	NA	NA	NA
AUJ85469.1|1763935_1764301_+|capsid	minor capsid protein	capsid	B3GW08	Streptococcus_phage	39.1	5.5e-15
AUJ85470.1|1764300_1764699_+|capsid	minor capsid protein	capsid	NA	NA	NA	NA
AUJ85471.1|1764699_1765218_+	hypothetical protein	NA	A0A1S5SEC5	Streptococcus_phage	50.7	1.4e-32
AUJ85472.1|1765257_1765653_+	hypothetical protein	NA	A0A1S5SFW6	Streptococcus_phage	29.1	1.7e-06
AUJ85473.1|1765657_1766239_+	hypothetical protein	NA	A0A1S5SAD5	Streptococcus_phage	34.7	3.4e-19
AUJ85474.1|1766225_1770956_+|tail	phage tail tape measure protein	tail	A0A1X9IGH8	Lactococcus_phage	36.7	4.0e-41
AUJ85475.1|1770952_1771711_+|tail	phage tail protein	tail	B3GW14	Streptococcus_phage	30.3	2.6e-22
AUJ85476.1|1771707_1774893_+	hypothetical protein	NA	A0A1G5SAE0	Enterococcus_phage	36.8	2.1e-62
>prophage 3
CP025223	Enterococcus sp. CR-Ec1 chromosome, complete genome	3819143	2050015	2108020	3819143	capsid,tRNA,coat,terminase,tail,holin,integrase	Enterococcus_phage(36.67%)	72	2065552:2065571	2108109:2108128
AUJ85733.1|2050015_2050942_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
AUJ85734.1|2051064_2051643_+	PAP2 family protein	NA	NA	NA	NA	NA
AUJ85735.1|2051694_2052045_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
AUJ85736.1|2052077_2054837_-	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	23.9	1.0e-20
AUJ85737.1|2054849_2055152_-	50S ribosomal protein L7	NA	NA	NA	NA	NA
AUJ85738.1|2055144_2055441_-	DUF448 domain-containing protein	NA	NA	NA	NA	NA
AUJ85739.1|2055457_2056672_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
AUJ85740.1|2056693_2057167_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
AUJ85741.1|2057374_2057728_-	DUF2752 domain-containing protein	NA	NA	NA	NA	NA
AUJ85742.1|2057712_2058147_-	DUF4234 domain-containing protein	NA	NA	NA	NA	NA
AUJ85743.1|2058321_2060262_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.5	9.5e-114
AUJ85744.1|2060572_2060749_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
AUJ85745.1|2060837_2061335_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
AUJ85746.1|2061304_2062177_-	aminoglycoside adenylyltransferase	NA	A0A1X9I6F2	Streptococcus_phage	34.3	1.2e-39
AUJ85747.1|2062317_2064600_+	DNA helicase	NA	NA	NA	NA	NA
AUJ85748.1|2064662_2065322_-	hypothetical protein	NA	NA	NA	NA	NA
2065552:2065571	attL	ACATTGTGATAGACATTTTG	NA	NA	NA	NA
AUJ85749.1|2065779_2066133_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85750.1|2066129_2066315_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85751.1|2066727_2066928_+	hypothetical protein	NA	R4IBK5	Listeria_phage	51.6	3.0e-07
AUJ85752.1|2066968_2067361_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85753.1|2067353_2067872_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85754.1|2067960_2068938_-	hypothetical protein	NA	A0A142F1N7	Bacillus_phage	58.2	3.2e-41
AUJ85755.1|2068984_2069473_-|holin	holin	holin	NA	NA	NA	NA
AUJ85756.1|2069498_2069636_-	XkdX family protein	NA	NA	NA	NA	NA
AUJ85757.1|2069628_2069952_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85758.1|2069948_2071370_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85759.1|2071383_2071605_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85760.1|2071591_2072029_-	DUF1617 domain-containing protein	NA	NA	NA	NA	NA
AUJ85761.1|2072025_2075229_-	hypothetical protein	NA	A0A1G5SAE0	Enterococcus_phage	39.9	1.4e-69
AUJ85762.1|2075207_2075963_-|tail	phage tail protein	tail	B3GW14	Streptococcus_phage	30.9	1.1e-22
AUJ85763.1|2075959_2080690_-|tail	phage tail tape measure protein	tail	A0A1X9IGH8	Lactococcus_phage	36.3	1.4e-41
AUJ85764.1|2080676_2081258_-	hypothetical protein	NA	A0A1S5SAD5	Streptococcus_phage	34.7	7.7e-19
AUJ85765.1|2081262_2081658_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85766.1|2081697_2082216_-	hypothetical protein	NA	A0A1S5SEC5	Streptococcus_phage	54.3	1.2e-34
AUJ85767.1|2082216_2082615_-|capsid	minor capsid protein	capsid	NA	NA	NA	NA
AUJ85768.1|2082614_2082980_-|capsid	minor capsid protein	capsid	NA	NA	NA	NA
AUJ85769.1|2082979_2083315_-|capsid	minor capsid protein	capsid	NA	NA	NA	NA
AUJ85770.1|2083311_2083767_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ87349.1|2083796_2083901_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85771.1|2083969_2084953_-|coat	coat protein	coat	A0A059T6D4	Listeria_phage	84.1	5.4e-158
AUJ85772.1|2084956_2085550_-|capsid	capsid protein	capsid	A0A1C9LX53	Streptococcus_phage	31.1	5.4e-12
AUJ85773.1|2085688_2085982_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85774.1|2085984_2087163_-|capsid	phage capsid protein	capsid	U3PFU0	Lactobacillus_phage	35.4	2.3e-54
AUJ85775.1|2087167_2088751_-|capsid	phage capsid protein	capsid	Q5YA75	Bacillus_phage	44.7	1.2e-114
AUJ85776.1|2088762_2090079_-|terminase	PBSX family phage terminase large subunit	terminase	Q5YA76	Bacillus_phage	64.8	2.4e-169
AUJ85777.1|2090075_2090786_-	TerS	NA	D6PSW8	Lactobacillus_phage	49.5	2.8e-39
AUJ85778.1|2090870_2091101_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85779.1|2091297_2091681_-	hypothetical protein	NA	A0A1J0MFD1	Staphylococcus_phage	35.3	4.4e-15
AUJ85780.1|2091710_2091938_-	hypothetical protein	NA	A0A097BY46	Enterococcus_phage	52.9	7.9e-20
AUJ85781.1|2091938_2092331_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A097BY81	Enterococcus_phage	72.3	1.6e-52
AUJ85782.1|2092323_2092503_-	DUF3797 domain-containing protein	NA	A0A0A8WES1	Clostridium_phage	44.6	2.6e-10
AUJ85783.1|2092730_2094968_-	DNA primase	NA	A0A097BY39	Enterococcus_phage	81.2	0.0e+00
AUJ85784.1|2094982_2095240_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85785.1|2095241_2095424_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85786.1|2095688_2095922_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85787.1|2095953_2097555_-	DEAD/DEAH box helicase	NA	A0A097BY72	Enterococcus_phage	85.0	1.8e-267
AUJ85788.1|2097612_2098404_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ85789.1|2098387_2098570_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85790.1|2098580_2099345_-	hypothetical protein	NA	A0A097BY87	Enterococcus_phage	63.9	1.9e-86
AUJ85791.1|2099789_2100425_-	hypothetical protein	NA	A0A097BY29	Enterococcus_phage	56.2	1.3e-32
AUJ85792.1|2100437_2101502_-	hypothetical protein	NA	A0A097BY66	Enterococcus_phage	72.7	1.1e-148
AUJ85793.1|2101501_2102839_-	chromosome segregation protein SMC	NA	A0A097BY67	Enterococcus_phage	65.6	6.7e-159
AUJ85794.1|2102813_2103164_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85795.1|2103191_2103458_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85796.1|2103458_2104253_-	helix-turn-helix domain containing protein	NA	NA	NA	NA	NA
AUJ85797.1|2104363_2104546_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85798.1|2104556_2104811_-	hypothetical protein	NA	A0A0S2MYC6	Enterococcus_phage	68.3	3.9e-28
AUJ85799.1|2104836_2105028_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ85800.1|2105307_2105661_+	transcriptional regulator	NA	C5J980	Streptococcus_phage	50.0	9.1e-23
AUJ85801.1|2105670_2106096_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
AUJ85802.1|2106282_2106738_+	hypothetical protein	NA	A0A1X9IGD6	Lactococcus_phage	74.6	3.8e-21
AUJ85803.1|2106799_2108020_+|integrase	site-specific integrase	integrase	A0A0S2MYI6	Enterococcus_phage	39.4	1.1e-59
2108109:2108128	attR	ACATTGTGATAGACATTTTG	NA	NA	NA	NA
>prophage 4
CP025223	Enterococcus sp. CR-Ec1 chromosome, complete genome	3819143	3296529	3340298	3819143	head,terminase,tail,holin,portal,integrase	Streptococcus_phage(30.56%)	55	3322267:3322282	3336880:3336895
AUJ86832.1|3296529_3297510_-	hypothetical protein	NA	A0A249XZR2	Enterococcus_phage	57.4	3.3e-46
AUJ86833.1|3297510_3297819_-	hypothetical protein	NA	A0A249XZP8	Enterococcus_phage	48.5	1.6e-20
AUJ86834.1|3297861_3298359_-|holin	holin	holin	A0A097BY69	Enterococcus_phage	69.9	1.7e-46
AUJ86835.1|3298415_3300920_-	hypothetical protein	NA	A0A140B3F5	Vibrio_phage	30.4	2.8e-09
AUJ86836.1|3300920_3301187_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86837.1|3301183_3301765_-	hypothetical protein	NA	Q708L1	Streptococcus_phage	28.0	7.7e-19
AUJ86838.1|3301761_3302895_-|tail	phage tail protein	tail	Q708L2	Streptococcus_phage	46.5	5.1e-91
AUJ86839.1|3302891_3303266_-	hypothetical protein	NA	Q708L3	Streptococcus_phage	49.6	9.3e-26
AUJ86840.1|3303270_3303573_-	hypothetical protein	NA	Q708L4	Streptococcus_phage	39.4	5.6e-13
AUJ86841.1|3303572_3304550_-	hypothetical protein	NA	Q708L5	Streptococcus_phage	43.2	7.7e-72
AUJ86842.1|3304546_3305224_-	hypothetical protein	NA	Q708L6	Streptococcus_phage	44.3	7.3e-45
AUJ86843.1|3305233_3309694_-|tail	phage tail tape measure protein	tail	Q5YA61	Bacillus_phage	59.4	1.4e-80
AUJ86844.1|3309876_3310272_-|portal	phage portal protein	portal	Q708L8	Streptococcus_phage	49.6	1.3e-25
AUJ86845.1|3310289_3310754_-|portal	phage portal protein	portal	S5M5L5	Brevibacillus_phage	49.4	2.3e-34
AUJ86846.1|3310773_3312078_-|tail	phage tail sheath protein	tail	Q708M0	Streptococcus_phage	49.8	1.1e-105
AUJ86847.1|3312079_3312313_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86848.1|3312299_3312731_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86849.1|3312727_3313198_-	hypothetical protein	NA	A0A0A7RTT0	Clostridium_phage	41.6	1.2e-22
AUJ86850.1|3313194_3313557_-	hypothetical protein	NA	A9D9T8	Lactobacillus_prophage	30.3	2.2e-08
AUJ86851.1|3313564_3313933_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86852.1|3313941_3314970_-|head	head protein	head	Q708M6	Streptococcus_phage	47.3	5.4e-76
AUJ86853.1|3314969_3315554_-	hypothetical protein	NA	Q9T1B8	Listeria_phage	36.5	5.5e-17
AUJ86854.1|3315778_3315982_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86855.1|3315974_3317582_-	hypothetical protein	NA	Q20DD6	Lactobacillus_phage	33.0	1.3e-44
AUJ86856.1|3317587_3318979_-|portal	phage portal protein	portal	Q708N3	Streptococcus_phage	53.6	6.8e-138
AUJ86857.1|3318992_3320267_-|terminase	PBSX family phage terminase large subunit	terminase	S6AVV7	Thermus_phage	44.0	2.5e-94
AUJ86858.1|3320272_3321091_-|terminase	small subunit of terminase	terminase	D2IZ90	Enterococcus_phage	63.2	1.0e-69
AUJ86859.1|3321176_3322043_-	hypothetical protein	NA	C9E2Q0	Enterococcus_phage	39.4	7.2e-29
3322267:3322282	attL	ACTATAACCCGTTTAA	NA	NA	NA	NA
AUJ86860.1|3322327_3322798_-	hypothetical protein	NA	Q2I8C1	Bacillus_phage	44.8	1.9e-23
AUJ87383.1|3322962_3323154_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86861.1|3323190_3323979_-	DNA methyltransferase	NA	Q24LC8	Clostridium_phage	44.0	1.3e-61
AUJ86862.1|3323980_3325219_-	DNA (cytosine-5-)-methyltransferase	NA	A0A141E1L1	Streptococcus_phage	68.7	6.8e-158
AUJ86863.1|3325254_3325446_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86864.1|3325587_3325782_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86865.1|3325778_3326564_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86866.1|3326577_3327012_-	RusA family crossover junction endodeoxyribonuclease	NA	S6B1L9	Thermus_phage	54.5	5.0e-31
AUJ86867.1|3327016_3327292_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86868.1|3327306_3328131_-	GntR family transcriptional regulator	NA	A8YQM0	Lactobacillus_phage	59.0	1.4e-29
AUJ86869.1|3328144_3328873_-	MBL fold metallo-hydrolase	NA	A0A0H4TGC9	Bacillus_phage	43.3	7.5e-56
AUJ86870.1|3328869_3329934_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86871.1|3329954_3330185_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86872.1|3330181_3332131_-	hypothetical protein	NA	A0A0A0RNI0	Bacillus_phage	30.0	1.6e-76
AUJ86873.1|3332127_3332451_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86874.1|3332863_3333058_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86875.1|3333054_3333387_-	DUF771 domain-containing protein	NA	A0A1B1IMW0	Lactococcus_phage	40.9	5.9e-16
AUJ86876.1|3333402_3333591_-	hypothetical protein	NA	NA	NA	NA	NA
AUJ86877.1|3333869_3334289_+	transcriptional regulator	NA	A0A1C8E9A4	Bacillus_phage	56.8	2.2e-36
AUJ86878.1|3334304_3334727_+	toxin	NA	A0A0B5CTZ7	Listeria_phage	56.7	1.2e-40
AUJ87384.1|3334853_3335138_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ86879.1|3335240_3336380_+|integrase	site-specific integrase	integrase	Q9AZR0	Lactococcus_phage	51.9	8.3e-110
AUJ86880.1|3336649_3336886_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ86881.1|3337064_3337694_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
3336880:3336895	attR	ACTATAACCCGTTTAA	NA	NA	NA	NA
AUJ87385.1|3337615_3337828_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ86882.1|3337943_3339188_-	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	55.1	1.2e-104
AUJ86883.1|3339269_3340298_-	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	40.6	3.8e-53
>prophage 5
CP025223	Enterococcus sp. CR-Ec1 chromosome, complete genome	3819143	3514660	3525561	3819143		Staphylococcus_phage(37.5%)	10	NA	NA
AUJ87036.1|3514660_3515221_-	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.0	1.5e-16
AUJ87037.1|3515307_3515649_+	hypothetical protein	NA	NA	NA	NA	NA
AUJ87038.1|3515799_3516813_-	ABC transporter	NA	NA	NA	NA	NA
AUJ87039.1|3516805_3517588_-	ABC transporter ATP-binding protein	NA	A0A1V0SKJ1	Klosneuvirus	28.5	4.2e-12
AUJ87040.1|3517592_3518666_-	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	25.4	1.0e-16
AUJ87041.1|3519134_3519608_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	50.0	1.5e-36
AUJ87042.1|3519629_3520841_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	50.9	2.5e-104
AUJ87043.1|3520818_3521406_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	39.4	4.0e-31
AUJ87044.1|3521390_3522467_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	35.7	3.3e-39
AUJ87045.1|3522912_3525561_-	magnesium-transporting ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	27.0	3.6e-71
