assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_002850395.1_ASM285039v1	CP020713	Staphylococcus aureus strain K17 chromosome, complete genome	2	685473-685557	1	CRISPRCasFinder	no		WYL,DinG,cas3,DEDDh,csa3	Orphan	CTTTTCGTCAGCTTCTATGTTGGGGCCC	28	1	6	685501-685529|685501-685529|685501-685529|685501-685529|685501-685529|685501-685529	CP020713.1_915137-915165|CP020713.1_2002873-2002901|CP020713.1_2010082-2010110|CP020713.1_2254102-2254130|CP020713.1_2264736-2264764|CP020713.1_2138122-2138094	NA	1	1	Orphan	WYL,DinG,cas3,DEDDh,csa3	NA,NA	NA|228aa|up_9|CP020713.1_674654_675338_-	COG1030, NfeD, Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]	NA|59aa|up_8|CP020713.1_675580_675757_-	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|449aa|up_7|CP020713.1_676049_677396_-	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]	NA|251aa|up_6|CP020713.1_677402_678155_-	COG1385, COG1385, Uncharacterized protein conserved in bacteria [Function unknown]	NA|313aa|up_5|CP020713.1_678156_679095_-	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|380aa|up_4|CP020713.1_679098_680238_-	PRK14280, PRK14280, molecular chaperone DnaJ	NA|611aa|up_3|CP020713.1_680373_682206_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|209aa|up_2|CP020713.1_682274_682901_-	PRK14140, PRK14140, heat shock protein GrpE; Provisional	NA|326aa|up_1|CP020713.1_682932_683910_-	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA	NA|375aa|up_0|CP020713.1_684010_685135_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|608aa|down_0|CP020713.1_685696_687520_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|84aa|down_1|CP020713.1_687865_688117_+	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|325aa|down_2|CP020713.1_688161_689136_-	PRK05574, holA, DNA polymerase III subunit delta; Reviewed	NA|716aa|down_3|CP020713.1_689192_691340_-	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|154aa|down_4|CP020713.1_691398_691860_-	TIGR02571, putative_dCMP_deaminase, ComE operon protein 2	NA|229aa|down_5|CP020713.1_691951_692638_-	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair]	NA|239aa|down_6|CP020713.1_692677_693394_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|118aa|down_7|CP020713.1_693396_693750_-	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|195aa|down_8|CP020713.1_693750_694335_-	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism]	NA|190aa|down_9|CP020713.1_694324_694894_-	TIGR00482, Probable_nicotinate-nucleotide_adenylyltransferase, nicotinate (nicotinamide) nucleotide adenylyltransferase
GCA_002850395.1_ASM285039v1	CP020713	Staphylococcus aureus strain K17 chromosome, complete genome	5	2253986-2254075	4	CRISPRCasFinder	no	DEDDh	WYL,DinG,cas3,DEDDh,csa3	Unclear	CCCCAACTTGCATTGCCTGTAGAATTTCTTTT	32	1	3	2254018-2254043|2254018-2254043|2254018-2254043	CP020713.1_1703188-1703213|CP020713.1_190378-190403|CP020713.1_2654549-2654524	NA	1	1	Orphan	WYL,DinG,cas3,DEDDh,csa3	NA|92aa|up_6|CP020713.1_2248233_2248509_+,NA|129aa|up_1|CP020713.1_2252490_2252877_-,NA|138aa|down_1|CP020713.1_2255738_2256152_-,NA|37aa|down_2|CP020713.1_2256180_2256291_-,NA|31aa|down_6|CP020713.1_2259296_2259389_-	NA|419aa|up_9|CP020713.1_2246156_2247413_-	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29)	NA|67aa|up_8|CP020713.1_2247415_2247616_-	COG4840, COG4840, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_7|CP020713.1_2247762_2248227_+	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|92aa|up_6|CP020713.1_2248233_2248509_+	NA	NA|406aa|up_5|CP020713.1_2248786_2250004_+	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair]	NA|210aa|up_4|CP020713.1_2250115_2250745_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|348aa|up_3|CP020713.1_2250734_2251778_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|234aa|up_2|CP020713.1_2251774_2252476_-	COG4758, COG4758, Predicted membrane protein [Function unknown]	NA|129aa|up_1|CP020713.1_2252490_2252877_-	NA	NA|253aa|up_0|CP020713.1_2253093_2253852_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|329aa|down_0|CP020713.1_2254380_2255367_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|138aa|down_1|CP020713.1_2255738_2256152_-	NA	NA|37aa|down_2|CP020713.1_2256180_2256291_-	NA	NA|244aa|down_3|CP020713.1_2256376_2257108_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|438aa|down_4|CP020713.1_2257109_2258423_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|167aa|down_5|CP020713.1_2258714_2259215_+	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]	NA|31aa|down_6|CP020713.1_2259296_2259389_-	NA	DEDDh|185aa|down_7|CP020713.1_2259604_2260159_+	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|357aa|down_8|CP020713.1_2260226_2261297_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|177aa|down_9|CP020713.1_2261543_2262074_-	pfam11667, DUF3267, Putative zincin peptidase
GCA_002850395.1_ASM285039v1	CP020713	Staphylococcus aureus strain K17 chromosome, complete genome	6	2556522-2556611	5	CRISPRCasFinder	no	csa3	WYL,DinG,cas3,DEDDh,csa3	Type I-A	CAACTTTAGTTGTTAGGGGCTCTT	24	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,cas3,DEDDh,csa3	NA|77aa|up_5|CP020713.1_2551393_2551624_-,NA|364aa|up_0|CP020713.1_2555413_2556505_+,NA|35aa|down_0|CP020713.1_2556946_2557051_-,NA|61aa|down_1|CP020713.1_2557483_2557666_-,NA|53aa|down_2|CP020713.1_2557730_2557889_+,NA|31aa|down_3|CP020713.1_2558324_2558417_+	NA|237aa|up_9|CP020713.1_2547004_2547715_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|CP020713.1_2547835_2548279_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|CP020713.1_2548478_2548892_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|CP020713.1_2549348_2550722_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|CP020713.1_2551393_2551624_-	NA	NA|313aa|up_4|CP020713.1_2551654_2552593_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|CP020713.1_2553028_2553694_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|CP020713.1_2553845_2554166_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|CP020713.1_2554167_2555148_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|CP020713.1_2555413_2556505_+	NA	NA|35aa|down_0|CP020713.1_2556946_2557051_-	NA	NA|61aa|down_1|CP020713.1_2557483_2557666_-	NA	NA|53aa|down_2|CP020713.1_2557730_2557889_+	NA	NA|31aa|down_3|CP020713.1_2558324_2558417_+	NA	NA|286aa|down_4|CP020713.1_2558546_2559404_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_5|CP020713.1_2559471_2560254_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_6|CP020713.1_2560485_2562291_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_7|CP020713.1_2562971_2564510_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_8|CP020713.1_2564544_2566677_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_9|CP020713.1_2566688_2567123_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]
GCA_002850395.1_ASM285039v1	CP020713	Staphylococcus aureus strain K17 chromosome, complete genome	8	2603360-2603449	7	CRISPRCasFinder	no		WYL,DinG,cas3,DEDDh,csa3	Orphan	TGATTGAGAAGTCAGTCGAAAAAC	24	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,cas3,DEDDh,csa3	NA|30aa|up_7|CP020713.1_2596186_2596276_-,NA|49aa|down_2|CP020713.1_2604002_2604149_+,NA|70aa|down_3|CP020713.1_2604141_2604351_+,NA|127aa|down_7|CP020713.1_2607653_2608034_+	NA|45aa|up_9|CP020713.1_2594565_2594700_+	PRK14752, PRK14752, delta-lysin family phenol-soluble modulin	NA|262aa|up_8|CP020713.1_2595296_2596082_-	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|30aa|up_7|CP020713.1_2596186_2596276_-	NA	NA|199aa|up_6|CP020713.1_2596442_2597039_-	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|394aa|up_5|CP020713.1_2597264_2598446_+	pfam05887, Trypan_PARP, Procyclic acidic repetitive protein (PARP)	NA|248aa|up_4|CP020713.1_2598469_2599213_-	pfam02517, Abi, CAAX protease self-immunity	NA|95aa|up_3|CP020713.1_2599387_2599672_+	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|539aa|up_2|CP020713.1_2599747_2601364_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|391aa|up_1|CP020713.1_2601432_2602605_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|225aa|up_0|CP020713.1_2602618_2603293_-	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|73aa|down_0|CP020713.1_2603465_2603684_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|106aa|down_1|CP020713.1_2603688_2604006_+	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family	NA|49aa|down_2|CP020713.1_2604002_2604149_+	NA	NA|70aa|down_3|CP020713.1_2604141_2604351_+	NA	NA|107aa|down_4|CP020713.1_2604353_2604674_+	pfam07342, DUF1474, Protein of unknown function (DUF1474)	NA|290aa|down_5|CP020713.1_2604740_2605610_+	smart00942, PriCT_1, Primase C terminal 1 (PriCT-1)	NA|567aa|down_6|CP020713.1_2605623_2607324_+	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair]	NA|127aa|down_7|CP020713.1_2607653_2608034_+	NA	NA|214aa|down_8|CP020713.1_2608030_2608672_+	pfam16560, SAPI, Putative mobile pathogenicity island	NA|235aa|down_9|CP020713.1_2609117_2609822_-	PRK13038, PRK13038, superantigen-like protein; Reviewed
