The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	10486	72851	2191149	transposase,integrase	Streptococcus_phage(40.0%)	49	29431:29447	57353:57369
AUI75336.1|10486_11665_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI75337.1|14884_15304_+	DDE endonuclease	NA	NA	NA	NA	NA
AUI75338.1|15651_16143_-	hypothetical protein	NA	NA	NA	NA	NA
AUI77104.1|16120_16690_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75339.1|17782_18961_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75340.1|19426_20284_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75341.1|22552_22918_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75342.1|23056_25078_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75343.1|25089_25545_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
AUI75344.1|25575_26970_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	50.6	3.7e-120
AUI75345.1|27206_28136_+	phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUI75346.1|28252_29530_-|transposase	transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.7	1.4e-12
29431:29447	attL	GCTTTTGCAGTTTGATC	NA	NA	NA	NA
AUI75347.1|29696_30626_+	fatty acid-binding protein DegV	NA	NA	NA	NA	NA
AUI75348.1|30744_31623_+	fructokinase	NA	NA	NA	NA	NA
AUI75349.1|31995_32256_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75350.1|32316_33546_-	esterase	NA	NA	NA	NA	NA
AUI75351.1|33629_34334_-	methyltransferase	NA	G3MA03	Bacillus_virus	43.6	2.1e-18
AUI75352.1|34819_36838_+	DNA methyltransferase	NA	Q1MVP0	Enterobacteria_phage	30.2	8.0e-31
AUI75353.1|36959_38138_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75354.1|38299_41077_+	restriction endonuclease subunit R	NA	NA	NA	NA	NA
AUI75355.1|41345_42314_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75356.1|42439_42751_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75357.1|42747_43830_+	cell division protein	NA	NA	NA	NA	NA
AUI75358.1|43826_44369_+	hypothetical protein	NA	NA	NA	NA	NA
AUI77105.1|44718_45636_+	replication initiation protein	NA	NA	NA	NA	NA
AUI75359.1|45695_45890_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75360.1|45960_47160_+|integrase	integrase	integrase	Q9ZXG6	Leuconostoc_phage	23.2	8.4e-12
AUI75361.1|47578_48865_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	51.3	1.7e-106
AUI75362.1|49122_49476_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75363.1|49472_49673_-	transcriptional regulator	NA	NA	NA	NA	NA
AUI75364.1|49840_50479_+	spermidine/putrescine ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	31.8	7.6e-20
AUI75365.1|50503_51262_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
AUI75366.1|53739_53964_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75367.1|53973_54561_+	transcriptional regulator	NA	NA	NA	NA	NA
AUI75368.1|54665_55967_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75369.1|57634_59035_+	hypothetical protein	NA	NA	NA	NA	NA
57353:57369	attR	GATCAAACTGCAAAAGC	NA	NA	NA	NA
AUI75370.1|59131_59905_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75371.1|59943_60504_-	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA	NA
AUI75372.1|60504_61029_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75373.1|61030_61441_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75374.1|61461_63696_-	ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	NA	A0A222ZQ84	Mycobacterium_phage	33.2	2.5e-89
AUI75375.1|63950_64985_+	AI-2E family transporter	NA	NA	NA	NA	NA
AUI75376.1|64981_65554_+	esterase	NA	NA	NA	NA	NA
AUI75377.1|66973_67603_-	fructose-2,6-bisphosphatase	NA	NA	NA	NA	NA
AUI75378.1|68005_69127_+	phosphoserine transaminase	NA	M1Q1P2	Streptococcus_phage	46.8	2.0e-92
AUI75379.1|69104_70271_+	3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	46.9	2.6e-98
AUI75380.1|70438_70753_+	supressor protein SugE	NA	NA	NA	NA	NA
AUI75381.1|71509_72343_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI77106.1|72290_72851_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	77660	141520	2191149	transposase,protease	Streptococcus_phage(14.29%)	47	NA	NA
AUI75386.1|77660_78851_+|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	59.7	8.4e-129
AUI75387.1|80769_81627_+	2,5-diketo-D-gluconic acid reductase	NA	A0A2H4PQR8	Staphylococcus_phage	43.1	3.9e-59
AUI75388.1|81965_83891_+	elongation factor G	NA	A0A1S5SF82	Streptococcus_phage	30.1	4.7e-65
AUI75389.1|84903_85917_-	lactate dehydrogenase	NA	M1H502	Paramecium_bursaria_Chlorella_virus	35.6	1.0e-50
AUI75390.1|86043_86886_+	aminoglycoside phosphotransferase	NA	NA	NA	NA	NA
AUI75391.1|87340_88168_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	63.5	3.4e-97
AUI75392.1|89184_92016_+	NgoFVII family restriction endonuclease	NA	A0A0K2CZF8	Paenibacillus_phage	24.9	1.6e-29
AUI75393.1|92055_93159_-	penicillin-binding protein	NA	NA	NA	NA	NA
AUI75394.1|93355_93769_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	38.9	1.0e-09
AUI77107.1|99582_99741_+	branched-chain amino acid transporter	NA	NA	NA	NA	NA
AUI75395.1|100842_101478_-	transcriptional regulator	NA	NA	NA	NA	NA
AUI75396.1|101629_101848_-	steroid-binding protein	NA	NA	NA	NA	NA
AUI75397.1|101935_102805_-	phospho-beta-glycosidase	NA	NA	NA	NA	NA
AUI75398.1|102801_103638_-	glucosyltransferase	NA	NA	NA	NA	NA
AUI75399.1|103762_104719_-	glucosyltransferase	NA	NA	NA	NA	NA
AUI75400.1|104737_105574_-	glycosyl transferase	NA	NA	NA	NA	NA
AUI75401.1|105669_106488_+	transcriptional regulator	NA	NA	NA	NA	NA
AUI75402.1|106920_107340_+	DDE endonuclease	NA	NA	NA	NA	NA
AUI75403.1|107411_107726_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75404.1|108206_108965_-	acyl-phosphate glycerol 3-phosphate acyltransferase	NA	NA	NA	NA	NA
AUI75405.1|109110_110289_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI75406.1|110473_111595_+	s-layer protein	NA	NA	NA	NA	NA
AUI75407.1|111868_113275_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI75408.1|114102_115005_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75409.1|115700_116525_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75410.1|116633_116816_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75411.1|116980_117175_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75412.1|117352_117610_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75413.1|118949_119156_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75414.1|119484_120201_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	39.2	3.0e-41
AUI77108.1|120267_122124_+	PAS domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	32.0	5.1e-32
AUI75415.1|122113_123463_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75416.1|123465_124290_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75417.1|124305_125103_+	MBL fold hydrolase	NA	A0A2I7SDH3	Paenibacillus_phage	34.1	1.2e-30
AUI75418.1|125189_126431_+|protease	serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	29.4	1.1e-17
AUI77109.1|126895_127375_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
AUI75419.1|127883_128768_-	proline iminopeptidase	NA	NA	NA	NA	NA
AUI75420.1|128776_129430_-	ABC transporter permease	NA	NA	NA	NA	NA
AUI75421.1|129433_130783_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	3.3e-12
AUI75422.1|130940_131882_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75423.1|133550_134447_-|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
AUI75424.1|134461_135022_-	hypothetical protein	NA	A0A1X9IGG1	Lactococcus_phage	33.7	1.2e-13
AUI75425.1|135088_136195_-	cation transporter	NA	NA	NA	NA	NA
AUI75426.1|136383_136788_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75427.1|136933_137287_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75428.1|137663_138842_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75429.1|140242_141520_-|transposase	transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.7	8.1e-13
>prophage 3
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	203230	307330	2191149	transposase,tRNA	Lactobacillus_virus(13.79%)	88	NA	NA
AUI75487.1|203230_204502_-|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	39.1	1.4e-65
AUI75488.1|204534_204945_-|transposase	transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	36.4	1.1e-19
AUI75489.1|205221_206445_+	N-acetylmuramidase	NA	S5M9Y4	Brevibacillus_phage	36.3	2.0e-13
AUI75490.1|206463_207555_+	amidase	NA	A0A2H4JAS1	uncultured_Caudovirales_phage	26.9	1.3e-19
AUI75491.1|207658_209494_+	potassium transporter	NA	NA	NA	NA	NA
AUI75492.1|210691_211657_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AUI75493.1|211666_212458_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75494.1|212545_213940_-	hypothetical protein	NA	A0A1B1P773	Bacillus_phage	43.0	5.7e-52
AUI75495.1|214903_215596_+	phosphoglyceromutase	NA	NA	NA	NA	NA
AUI75496.1|215818_216430_+	pyroglutamyl-peptidase I	NA	NA	NA	NA	NA
AUI75497.1|216555_217962_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75498.1|218091_218652_+	aldose epimerase	NA	NA	NA	NA	NA
AUI75499.1|218753_219863_+	LytR family transcriptional regulator	NA	NA	NA	NA	NA
AUI75500.1|219862_220480_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75501.1|220515_223506_+	glucan modification protein	NA	NA	NA	NA	NA
AUI75502.1|223591_224986_+	ferrous iron transporter A	NA	NA	NA	NA	NA
AUI75503.1|225239_226502_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	41.9	6.7e-84
AUI75504.1|226923_227280_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75505.1|227584_228898_+	aminopeptidase	NA	R4TV59	Phaeocystis_globosa_virus	33.0	2.6e-62
AUI75506.1|228897_229551_+	phosphohydrolase	NA	NA	NA	NA	NA
AUI75507.1|229719_231342_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUI75508.1|231416_233048_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUI75509.1|233204_234347_+	guanosine monophosphate reductase	NA	A0A1V0SHK8	Klosneuvirus	34.1	1.2e-63
AUI75510.1|234521_235451_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
AUI75511.1|235459_236491_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
AUI75512.1|236506_237565_+	peptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.0	3.7e-19
AUI75513.1|237585_238530_+	peptide ABC transporter substrate-binding protein	NA	G9BWD6	Planktothrix_phage	33.3	4.6e-21
AUI75514.1|238611_239928_-	aminopeptidase	NA	R4TV59	Phaeocystis_globosa_virus	36.1	1.0e-63
AUI75515.1|240068_240515_-	heat-shock protein Hsp20	NA	NA	NA	NA	NA
AUI75516.1|241325_241673_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI77110.1|241712_241943_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75517.1|241917_243255_+|transposase	transposase	transposase	S5VTD3	Leptospira_phage	34.4	7.4e-49
AUI75518.1|243558_244221_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75519.1|244381_244981_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75520.1|245136_246543_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75521.1|246712_247735_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
AUI75522.1|247759_248239_+	competence protein ComE	NA	A7KUY9	Bacillus_phage	59.0	5.2e-37
AUI75523.1|248219_248837_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75524.1|249135_251799_+	magnesium-translocating P-type ATPase	NA	M1HXH2	Paramecium_bursaria_Chlorella_virus	24.4	9.9e-37
AUI75525.1|251891_253868_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	39.2	5.2e-99
AUI75526.1|253867_254635_+	hydrolase TatD	NA	NA	NA	NA	NA
AUI75527.1|254621_255188_+	ribonuclease M5	NA	NA	NA	NA	NA
AUI75528.1|255177_256053_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase	NA	NA	NA	NA	NA
AUI75529.1|256133_256391_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75530.1|256491_257322_+	pur operon repressor	NA	NA	NA	NA	NA
AUI75531.1|257368_258754_+	UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase	NA	A0A0G2Y8M0	Acanthamoeba_polyphaga_mimivirus	34.0	1.0e-29
AUI75532.1|259542_259974_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75533.1|260068_261025_+|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	49.2	5.9e-93
AUI75534.1|262494_263889_+	cell division protein	NA	NA	NA	NA	NA
AUI75535.1|264129_265104_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	36.8	6.6e-47
AUI75536.1|266132_266408_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75537.1|266435_267800_-	hypothetical protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	33.1	1.4e-31
AUI75538.1|267913_268315_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75539.1|268361_268919_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
AUI75540.1|269036_270656_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	47.2	5.6e-136
AUI75541.1|270785_272087_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AUI75542.1|272083_272941_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI75543.1|273177_273399_+	phosphatase	NA	NA	NA	NA	NA
AUI75544.1|273432_273795_+	haloacid dehalogenase	NA	NA	NA	NA	NA
AUI75545.1|273850_275275_-	peptidase U34	NA	NA	NA	NA	NA
AUI75546.1|275355_276180_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AUI75547.1|276279_277554_-	Uric acid permease PucJ	NA	Q9KX94	Enterobacteria_phage	27.9	1.4e-28
AUI75548.1|277557_278136_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
AUI75549.1|278409_279588_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI77111.1|279789_280392_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75550.1|280743_281934_+|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	57.7	9.0e-123
AUI75551.1|282251_282446_-	hypothetical protein	NA	NA	NA	NA	NA
AUI77112.1|282432_282726_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75552.1|282768_282921_-	DNA-binding protein	NA	NA	NA	NA	NA
AUI75553.1|283160_284711_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	34.1	6.2e-23
AUI75554.1|286463_286703_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75555.1|287099_288335_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.2	1.2e-101
AUI75556.1|288462_289740_-|transposase	transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	20.3	3.8e-10
AUI75557.1|291196_292375_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI75558.1|292672_293056_+	hypothetical protein	NA	A0A146ICT8	Staphylococcus_phage	37.9	9.6e-10
AUI75559.1|293063_293756_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AUI75560.1|293967_295146_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75561.1|295339_296416_+	cell surface protein	NA	NA	NA	NA	NA
AUI75562.1|296754_297939_+|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	59.1	2.3e-123
AUI75563.1|298125_298956_-	sugar-phosphatase	NA	NA	NA	NA	NA
AUI75564.1|299140_299386_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
AUI75565.1|299512_300880_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
AUI75566.1|300892_302416_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	38.4	2.5e-69
AUI75567.1|302498_302855_+	holo-ACP synthase	NA	NA	NA	NA	NA
AUI75568.1|302857_303988_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	27.7	7.2e-29
AUI75569.1|304771_305479_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75570.1|305666_306638_-	L-lactate dehydrogenase	NA	NA	NA	NA	NA
AUI75571.1|306772_307330_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
>prophage 4
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	352767	466970	2191149	integrase,transposase,tRNA	Streptococcus_phage(10.0%)	113	354498:354515	364751:364768
AUI75621.1|352767_353559_+|tRNA	tRNA pseudouridine(38,39,40) synthase TruA	tRNA	NA	NA	NA	NA
AUI75622.1|353659_354103_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
AUI75623.1|354118_354514_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
354498:354515	attL	AATTCTCAAAGCGTTAAT	NA	NA	NA	NA
AUI75624.1|354583_355636_-|integrase	integrase	integrase	A0A0M9JJ77	Lactobacillus_phage	30.4	1.0e-37
AUI75625.1|355710_355899_-	hypothetical protein	NA	NA	NA	NA	NA
AUI77114.1|355960_356881_-	replication initiation protein	NA	A0A1S6LVK5	Cruciviridae_sp	28.2	3.9e-09
AUI75626.1|357248_357755_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75627.1|357761_358844_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75628.1|358846_359152_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75629.1|359299_359479_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75630.1|359490_360426_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75631.1|360467_363254_+	methylase	NA	Q6NE04	Leptospira_phage	37.0	3.0e-161
AUI75632.1|363287_364586_+	hypothetical protein	NA	NA	NA	NA	NA
AUI77115.1|364830_365241_-	hypothetical protein	NA	NA	NA	NA	NA
364751:364768	attR	AATTCTCAAAGCGTTAAT	NA	NA	NA	NA
AUI75633.1|365330_365915_-	4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein	NA	NA	NA	NA	NA
AUI75634.1|366689_367448_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75635.1|367486_368167_+	fructose-2,6-bisphosphatase	NA	NA	NA	NA	NA
AUI75636.1|368229_369129_+	cobalt transporter	NA	A0A1V0SED0	Indivirus	34.8	6.3e-12
AUI75637.1|369137_369320_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75638.1|369333_370014_+	phosphoglycerate mutase	NA	NA	NA	NA	NA
AUI75639.1|370117_371053_+	2',3'-cyclic-nucleotide 2'-phosphodiesterase	NA	I7CCW4	Staphylococcus_virus	25.7	9.5e-11
AUI75640.1|371261_372440_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75641.1|374274_376953_+	magnesium-translocating P-type ATPase	NA	M1HJQ2	Paramecium_bursaria_Chlorella_virus	24.4	4.9e-44
AUI75642.1|377604_378447_-	sugar transporter	NA	NA	NA	NA	NA
AUI75643.1|378590_379940_-	aminopeptidase	NA	R4TV59	Phaeocystis_globosa_virus	35.5	4.8e-72
AUI75644.1|380149_381007_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75645.1|381243_382434_-|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	58.7	1.5e-125
AUI75646.1|382647_382950_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75647.1|383086_383638_+	dUTP diphosphatase	NA	J9PV85	Bacillus_phage	48.6	3.1e-38
AUI75648.1|383637_385014_+	DNA repair protein RadA	NA	A0A2I7QPS8	Vibrio_phage	24.6	8.8e-05
AUI75649.1|385089_386589_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
AUI75650.1|386681_388112_+|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	29.4	6.2e-46
AUI75651.1|388104_388545_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75652.1|388531_389284_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
AUI75653.1|389426_389972_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AUI75654.1|390047_390266_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75655.1|390377_391874_+	gluconate kinase	NA	NA	NA	NA	NA
AUI75656.1|393955_394123_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AUI75657.1|394230_394788_+	transcription termination/antitermination protein NusG	NA	F5B3X4	Synechococcus_phage	31.3	2.3e-12
AUI75658.1|394915_395341_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
AUI75659.1|395423_396116_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
AUI75660.1|396257_397520_-|transposase	transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	22.1	1.3e-10
AUI75661.1|398051_398243_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75662.1|398265_398472_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75663.1|398602_399469_+	phosphate ABC transporter substrate-binding protein	NA	M1PR58	Cyanophage	22.6	4.2e-05
AUI75664.1|399472_400468_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AUI75665.1|400469_401357_+	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
AUI75666.1|401367_402162_+	phosphate ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	33.5	1.0e-13
AUI75667.1|402163_402919_+	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.5	3.9e-15
AUI75668.1|402935_403613_+	phosphate transport system regulatory protein PhoU	NA	NA	NA	NA	NA
AUI75669.1|405207_405720_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
AUI75670.1|405770_406133_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
AUI75671.1|406246_406441_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75672.1|406557_407736_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75673.1|408414_409044_+	16S rRNA methyltransferase	NA	NA	NA	NA	NA
AUI75674.1|409033_409540_+|tRNA	tRNA-specific adenosine deaminase	tRNA	S4VYZ2	Pandoravirus	39.5	9.1e-08
AUI75675.1|409734_411522_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	39.7	2.0e-49
AUI75676.1|411554_411890_+	nucleoid-associated protein	NA	NA	NA	NA	NA
AUI75677.1|411890_412490_+	recombination protein RecR	NA	NA	NA	NA	NA
AUI75678.1|412489_412735_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75679.1|412838_413477_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	51.0	3.6e-54
AUI75680.1|413488_413809_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75681.1|413809_414667_+	DNA polymerase III subunit delta	NA	M1NSC1	Streptococcus_phage	29.2	3.9e-19
AUI75682.1|414677_415028_+	Initiation-control protein	NA	NA	NA	NA	NA
AUI75683.1|415029_415884_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	47.7	2.3e-64
AUI75684.1|415886_416621_+	acyl-ACP thioesterase	NA	NA	NA	NA	NA
AUI75685.1|416663_417182_+	BioY family transporter	NA	NA	NA	NA	NA
AUI75686.1|417206_417941_+|tRNA	tRNA N6-adenosine(37)-N6-threonylcarbamoyltransferase complex dimerization subunit TsaB	tRNA	NA	NA	NA	NA
AUI75687.1|417924_418497_+	ribosomal-protein-alanine N-acetyltransferase	NA	NA	NA	NA	NA
AUI77116.1|418547_419597_+|tRNA	tRNA N6-adenosine(37)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	35.2	1.1e-50
AUI75688.1|419665_420943_-|transposase	transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.7	1.8e-12
AUI75689.1|421120_423034_-	ABC transporter	NA	A0A2K9L3Z8	Tupanvirus	31.4	6.0e-60
AUI75690.1|423207_423855_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
AUI75691.1|423994_424453_+	DNA-binding protein	NA	NA	NA	NA	NA
AUI75692.1|424449_425196_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75693.1|426595_427141_+	sucrose PTS transporter	NA	NA	NA	NA	NA
AUI75694.1|427370_428777_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI77117.1|428921_429185_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75695.1|429266_429452_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75696.1|429718_430249_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75697.1|430464_430749_+	co-chaperone GroES	NA	A0A221S304	uncultured_virus	40.7	1.2e-12
AUI75698.1|430802_432425_+	chaperonin GroL	NA	A0A240F766	uncultured_virus	54.0	4.4e-157
AUI75699.1|432584_435182_+	DNA mismatch repair protein MutS	NA	F2QAF7	Pyramimonas_orientalis_virus	25.2	4.6e-39
AUI75700.1|435181_437092_+	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	29.7	5.8e-55
AUI75701.1|437092_437683_+	Holliday junction DNA helicase RuvA	NA	NA	NA	NA	NA
AUI75702.1|437731_438748_+	Holliday junction DNA helicase RuvB	NA	B3GAM6	uncultured_virus	32.5	7.4e-09
AUI75703.1|438806_439232_+	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
AUI75704.1|439367_440819_+	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	32.4	3.3e-63
AUI75705.1|440811_441933_+	DNA polymerase IV	NA	A0A1P8CWP4	Bacillus_phage	24.5	3.1e-16
AUI75706.1|441992_442949_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75707.1|442941_444303_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.2	4.4e-49
AUI75708.1|445110_446289_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75709.1|446437_446746_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75710.1|447015_449655_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	33.0	6.1e-63
AUI75711.1|449715_449973_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75712.1|449972_450401_+	Holliday junction DNA helicase RuvA	NA	NA	NA	NA	NA
AUI75713.1|450402_450714_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75714.1|450777_453135_+	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	48.7	9.7e-20
AUI75715.1|453235_453547_+	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	42.7	3.8e-17
AUI75716.1|453586_453964_-	mechanosensitive ion channel protein MscL	NA	NA	NA	NA	NA
AUI75717.1|454034_454892_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI75718.1|454960_456355_-	hypothetical protein	NA	A0A1B1P773	Bacillus_phage	43.0	4.4e-52
AUI75719.1|456507_456921_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75720.1|456997_457801_+	glutamate racemase	NA	NA	NA	NA	NA
AUI75721.1|457800_458421_+	non-canonical purine NTP pyrophosphatase	NA	A0A2P1DNP2	Cassava_brown_streak_virus	34.0	8.8e-13
AUI75722.1|458699_459926_-|transposase	transposase	transposase	A0A1X9I619	Streptococcus_phage	37.9	1.1e-64
AUI75723.1|460166_461426_-|transposase	transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.1	2.9e-10
AUI75724.1|461593_462445_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
AUI75725.1|462578_463004_+	chemotaxis protein	NA	NA	NA	NA	NA
AUI75726.1|463021_463393_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75727.1|463458_464565_-	dipeptidase	NA	NA	NA	NA	NA
AUI75728.1|464711_465713_+	catabolite control protein A	NA	C6ZCU4	Enterobacteria_phage	26.3	1.1e-20
AUI75729.1|465791_466970_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 5
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	522397	649497	2191149	transposase,integrase,bacteriocin,tRNA	Bacillus_phage(19.23%)	117	573897:573940	635071:635114
AUI75770.1|522397_524083_+|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	31.4	6.0e-72
AUI75771.1|524193_525105_+	fructose-bisphosphate aldolase	NA	NA	NA	NA	NA
AUI75772.1|525177_525696_+	DNA mismatch repair protein MutT	NA	NA	NA	NA	NA
AUI75773.1|525698_525968_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75774.1|526115_526388_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75775.1|526377_526989_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75776.1|529150_529951_-	multidrug transporter	NA	NA	NA	NA	NA
AUI75777.1|529931_530408_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75778.1|530551_531730_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI75779.1|531851_532106_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75780.1|532105_532300_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75781.1|532504_533683_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75782.1|533752_533974_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75783.1|534103_534373_+	transcriptional regulator	NA	NA	NA	NA	NA
AUI75784.1|534539_534794_+	AbrB family toxin-antitoxin system antitoxin	NA	NA	NA	NA	NA
AUI75785.1|534858_535173_+	transcriptional regulator	NA	NA	NA	NA	NA
AUI75786.1|536872_537094_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75787.1|537441_537861_-	DDE endonuclease	NA	NA	NA	NA	NA
AUI75788.1|538003_538489_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75789.1|538631_539471_+	fatty acid-binding protein DegV	NA	NA	NA	NA	NA
AUI75790.1|539784_539967_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75791.1|539963_540662_+	hypothetical protein	NA	NA	NA	NA	NA
AUI77118.1|542090_542606_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75792.1|542602_542785_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AUI75793.1|542795_543614_+	triphosphoribosyl-dephospho-CoA synthase	NA	NA	NA	NA	NA
AUI75794.1|543664_543994_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75795.1|544057_544810_-	aquaporin	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	30.7	1.4e-25
AUI75796.1|545866_546013_+	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
AUI75797.1|546678_547857_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI75798.1|548378_550436_+	carboxypeptidase	NA	NA	NA	NA	NA
AUI75799.1|550456_550807_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75800.1|550815_552036_+	phosphoesterase	NA	NA	NA	NA	NA
AUI75801.1|552016_554518_+	DNA repair protein	NA	NA	NA	NA	NA
AUI75802.1|554510_555488_+	3'-5' exonuclease	NA	NA	NA	NA	NA
AUI75803.1|555530_555953_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75804.1|556091_556994_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AUI75805.1|557111_557447_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75806.1|557456_557894_-	diadenosine tetraphosphate hydrolase	NA	NA	NA	NA	NA
AUI75807.1|558105_558372_+	addiction module toxin RelE	NA	NA	NA	NA	NA
AUI75808.1|558388_558724_+	addiction module antidote protein, HigA family	NA	NA	NA	NA	NA
AUI75809.1|558738_559482_+	multidrug ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.6	1.7e-18
AUI75810.1|559474_560662_+	ABC transporter permease	NA	NA	NA	NA	NA
AUI75811.1|560673_561327_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
AUI75812.1|561397_561718_+	thiol reductase thioredoxin	NA	NA	NA	NA	NA
AUI75813.1|561737_562385_+|tRNA	tRNA-binding protein	tRNA	NA	NA	NA	NA
AUI75814.1|562436_563744_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75815.1|565445_565643_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75816.1|565750_566359_+	resolvase	NA	A0A1V0SJI5	Klosneuvirus	42.0	5.2e-34
AUI75817.1|566388_567714_+|transposase	transposase	transposase	G3MB42	Bacillus_virus	36.3	7.3e-57
AUI77119.1|568078_568465_+	permease	NA	NA	NA	NA	NA
AUI75818.1|568802_573773_+	peptidase S8	NA	A0A1B0T6A2	Bacillus_phage	32.8	3.1e-15
573897:573940	attL	GGCTCTTTGTCAAATCCTGTTGATAGAGAGTAAATGAATAGAAT	NA	NA	NA	NA
AUI75819.1|573939_575217_-|transposase	transposase	transposase	Q6V7R1	Burkholderia_virus	23.4	1.3e-10
AUI75820.1|575530_576766_-	hypothetical protein	NA	A0A1B1P773	Bacillus_phage	47.3	9.8e-56
AUI75821.1|576821_577466_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75822.1|577500_578133_-	aggregation promoting protein	NA	A0A0E3XCL7	Enterococcus_phage	62.2	4.1e-18
AUI75823.1|578705_579158_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75824.1|579312_580626_+	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
AUI75825.1|580680_581658_-	cell surface protein	NA	NA	NA	NA	NA
AUI75826.1|581746_583261_-	aminopeptidase	NA	NA	NA	NA	NA
AUI75827.1|583398_584376_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
AUI75828.1|584754_585933_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75829.1|586162_586477_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AUI75830.1|586494_587376_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75831.1|587653_588832_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI75832.1|590444_591806_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75833.1|591941_595418_+	restriction endonuclease	NA	A0A1B1IUC6	uncultured_Mediterranean_phage	23.3	4.6e-26
AUI75834.1|595417_598912_+	hypothetical protein	NA	A0A2K5B2B9	Erysipelothrix_phage	23.7	1.6e-31
AUI75835.1|599285_599816_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75836.1|599922_601743_+	fumarate reductase	NA	M1HTN0	Paramecium_bursaria_Chlorella_virus	23.0	4.9e-11
AUI75837.1|601755_602172_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75838.1|602128_602914_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75839.1|602906_603587_+	hypothetical protein	NA	A0A2P0ZL82	Lactobacillus_phage	33.0	9.7e-05
AUI75840.1|603604_605080_+	fumarate reductase	NA	A0A2P0ZL82	Lactobacillus_phage	24.2	1.2e-20
AUI75841.1|607052_607520_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75842.1|607568_608618_-|integrase	integrase	integrase	H7BWC8	unidentified_phage	35.1	6.0e-46
AUI75843.1|609091_611755_+	DNA polymerase I	NA	F8WQ35	Bacillus_phage	31.0	2.9e-60
AUI75844.1|611763_612594_+	DNA-formamidopyrimidine glycosylase	NA	A0A127AWE5	Bacillus_phage	25.9	7.1e-18
AUI75845.1|612590_613193_+	dephospho-CoA kinase	NA	NA	NA	NA	NA
AUI75846.1|613195_613663_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
AUI75847.1|613665_614997_+	chromosome replication initiation protein	NA	NA	NA	NA	NA
AUI75848.1|615028_615937_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	28.1	9.2e-27
AUI75849.1|616227_618162_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	33.4	1.6e-97
AUI75850.1|618319_618841_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75851.1|618992_619523_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75852.1|619713_620322_+	resolvase	NA	A0A1V0SJI5	Klosneuvirus	43.2	1.5e-33
AUI75853.1|620351_621677_+|transposase	transposase	transposase	G3MB42	Bacillus_virus	36.0	8.1e-56
AUI75854.1|622860_623154_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75855.1|623160_624411_+	hypothetical protein	NA	NA	NA	NA	NA
AUI77120.1|624508_624790_+	hypothetical protein	NA	NA	NA	NA	NA
AUI77121.1|624957_626196_+	aryl-sulfate sulfotransferase	NA	NA	NA	NA	NA
AUI75856.1|626440_626920_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	38.7	4.0e-13
AUI75857.1|626941_627142_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
AUI75858.1|627185_627542_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
AUI75859.1|627687_628212_+	HAD family hydrolase	NA	NA	NA	NA	NA
AUI75860.1|628204_629314_+	ribosome biogenesis GTPase YqeH	NA	NA	NA	NA	NA
AUI75861.1|629324_629981_+	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
AUI75862.1|629961_630555_+	HD domain-containing protein	NA	NA	NA	NA	NA
AUI75863.1|630576_630924_+	ribosome silencing factor	NA	NA	NA	NA	NA
AUI75864.1|630929_632081_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75865.1|632082_632637_+	DNA-binding protein	NA	NA	NA	NA	NA
AUI75866.1|632799_633516_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	30.1	1.8e-25
AUI75867.1|633502_635062_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AUI75868.1|635164_636529_+	SlpX	NA	NA	NA	NA	NA
635071:635114	attR	GGCTCTTTGTCAAATCCTGTTGATAGAGAGTAAATGAATAGAAT	NA	NA	NA	NA
AUI75869.1|637148_638459_-|transposase	transposase	transposase	Q6V7R1	Burkholderia_virus	23.5	8.6e-10
AUI75870.1|638541_639720_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75871.1|639981_640470_-|tRNA	aminoacyl-tRNA deacylase	tRNA	NA	NA	NA	NA
AUI75872.1|640517_641486_-	insertase	NA	NA	NA	NA	NA
AUI75873.1|641532_641805_-	acylphosphatase	NA	NA	NA	NA	NA
AUI75874.1|641902_642670_+	rRNA methyltransferase	NA	NA	NA	NA	NA
AUI75875.1|642781_643132_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AUI75876.1|643416_644466_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	37.3	5.3e-34
AUI75877.1|644469_646884_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AUI75878.1|646960_647437_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
AUI75879.1|647499_648414_+	L-lactate dehydrogenase	NA	NA	NA	NA	NA
AUI77122.1|648535_648943_+	addiction module toxin RelE	NA	NA	NA	NA	NA
AUI75880.1|648935_649208_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AUI75881.1|649266_649497_-|transposase	transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	55.9	3.0e-11
>prophage 6
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	657422	773917	2191149	transposase,integrase,protease,tRNA	Bacillus_virus(14.29%)	87	647848:647863	770951:771030
647848:647863	attL	ATTAATATTTCTAATC	NA	NA	NA	NA
AUI75888.1|657422_658103_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
647848:647863	attL	ATTAATATTTCTAATC	NA	NA	NA	NA
AUI75889.1|658103_658331_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75890.1|658389_658791_+	sulfurtransferase	NA	NA	NA	NA	NA
AUI75891.1|658869_659790_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AUI75892.1|659854_660274_+	DDE endonuclease	NA	NA	NA	NA	NA
AUI75893.1|660345_660660_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75894.1|661550_662888_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AUI75895.1|663999_664905_+	ABC transporter	NA	NA	NA	NA	NA
AUI77123.1|665005_666019_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75896.1|666085_666955_-|integrase	integrase	integrase	A0A1B1P773	Bacillus_phage	41.8	6.5e-46
AUI75897.1|667595_668588_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	38.4	5.3e-52
AUI75898.1|668692_669649_-	beta-galactosidase	NA	NA	NA	NA	NA
AUI75899.1|669632_671519_-	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	33.5	3.1e-93
AUI75900.1|672718_673726_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AUI77124.1|673835_674099_+	lactose permease	NA	NA	NA	NA	NA
AUI75901.1|674312_674642_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75902.1|674687_675176_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75903.1|675154_675775_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75904.1|676039_677956_+	phosphotransferase enzyme IIA component	NA	NA	NA	NA	NA
AUI75905.1|679185_680421_-	hypothetical protein	NA	A0A1B1P773	Bacillus_phage	46.9	2.2e-55
AUI75906.1|681888_683034_+	MFS transporter	NA	NA	NA	NA	NA
AUI75907.1|684188_685850_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
683064:683079	attR	GATTAGAAATATTAAT	NA	NA	NA	NA
AUI75908.1|685860_686349_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.1	4.8e-22
683064:683079	attR	GATTAGAAATATTAAT	NA	NA	NA	NA
AUI75909.1|686341_687478_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AUI75910.1|687675_688392_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D7SPE1	Cyanophage	39.1	9.7e-40
AUI75911.1|688391_688643_+	phosphoribosylformylglycinamidine synthase, purS protein	NA	NA	NA	NA	NA
AUI75912.1|688642_689314_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
AUI75913.1|689310_691542_+	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	38.9	7.8e-144
AUI75914.1|691517_692951_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.1	5.3e-61
AUI75915.1|692982_694032_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F0L1	Synechococcus_phage	43.9	9.2e-63
AUI77125.1|694622_696164_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	46.6	1.8e-75
AUI75916.1|696176_697433_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
AUI75917.1|697520_698699_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI75918.1|699011_700289_-|transposase	transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.7	1.8e-12
AUI75919.1|701813_702653_+	RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AUI75920.1|702683_703640_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AUI75921.1|703629_704793_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AUI75922.1|704773_706318_-	heme ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.9	5.2e-14
AUI75923.1|706386_707472_-	BMP family ABC transporter substrate-binding protein	NA	A0A0A7DN02	Lactobacillus_phage	49.3	5.2e-77
AUI77126.1|707589_707811_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75924.1|708306_709896_+	ABC transporter	NA	G9BWD6	Planktothrix_phage	29.7	1.5e-11
AUI75925.1|712219_713449_+	MFS transporter	NA	NA	NA	NA	NA
AUI75926.1|713521_715396_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
AUI75927.1|719640_720819_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75928.1|721271_722438_+	galactokinase	NA	NA	NA	NA	NA
AUI75929.1|722459_723923_+	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
AUI75930.1|724043_725039_+	galactose mutarotase	NA	NA	NA	NA	NA
AUI75931.1|725159_725600_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75932.1|725834_726536_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75933.1|728399_729572_+	MFS transporter permease	NA	NA	NA	NA	NA
AUI75934.1|729590_729998_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75935.1|730017_730722_+	oxidoreductase	NA	NA	NA	NA	NA
AUI75936.1|731695_732973_+|transposase	transposase	transposase	Q6V7R1	Burkholderia_virus	23.4	2.9e-10
AUI75937.1|734248_734755_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75938.1|734935_736387_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75939.1|737865_739044_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI75940.1|739266_739686_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75941.1|739916_741095_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75942.1|741133_741343_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75943.1|744801_745209_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75944.1|747685_747928_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75945.1|747949_748339_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75946.1|748493_748820_-	DNA methyltransferase	NA	NA	NA	NA	NA
AUI75947.1|748821_749706_-	L-serine dehydratase, iron-sulfur-dependent subunit alpha	NA	NA	NA	NA	NA
AUI75948.1|749720_750383_-	serine dehydratase	NA	NA	NA	NA	NA
AUI75949.1|750915_751212_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75950.1|751352_752402_-|integrase	integrase	integrase	H7BWC8	unidentified_phage	34.3	4.6e-46
AUI75951.1|752546_753776_+	MFS transporter	NA	NA	NA	NA	NA
AUI75952.1|754027_754240_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI75953.1|754312_754660_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75954.1|754699_755209_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75955.1|755551_757303_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUI75956.1|757401_757569_+	quaternary ammonium transporter	NA	NA	NA	NA	NA
AUI75957.1|757956_758190_-	hypothetical protein	NA	NA	NA	NA	NA
AUI75958.1|758342_759002_+	polar amino acid ABC transporter permease	NA	NA	NA	NA	NA
AUI75959.1|758982_759657_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AUI75960.1|759666_760407_+	glutamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.8	9.1e-25
AUI75961.1|760419_761280_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUI75962.1|761326_761623_-	DNA methyltransferase	NA	NA	NA	NA	NA
AUI75963.1|761639_761954_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI75964.1|762025_762445_-	DDE endonuclease	NA	NA	NA	NA	NA
AUI75965.1|762463_765802_+	hypothetical protein	NA	NA	NA	NA	NA
AUI75966.1|767347_767956_+	resolvase	NA	A0A1V0SJI5	Klosneuvirus	43.2	1.5e-33
AUI75967.1|767985_769311_+|transposase	transposase	transposase	G3MB42	Bacillus_virus	36.0	8.1e-56
AUI75968.1|769682_770915_+	MFS transporter	NA	NA	NA	NA	NA
AUI75969.1|771190_772417_-|transposase	transposase	transposase	A0A1X9I619	Streptococcus_phage	38.1	1.1e-64
AUI75970.1|772657_773917_-|transposase	transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	21.1	2.4e-09
>prophage 7
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	858334	921517	2191149	transposase,integrase,protease,tRNA	Streptococcus_phage(11.11%)	53	878276:878290	923376:923390
AUI77130.1|858334_858766_+|transposase	transposase	transposase	W5R8L2	Staphylococcus_phage	34.9	4.2e-14
AUI76040.1|858880_859222_+	transcriptional regulator	NA	NA	NA	NA	NA
AUI76041.1|859226_860657_+	signal recognition particle protein	NA	NA	NA	NA	NA
AUI76042.1|860748_861021_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
AUI76043.1|861089_861605_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AUI76044.1|861594_862314_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AUI76045.1|862426_862774_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
AUI76046.1|863162_863822_+	uracil-DNA glycosylase	NA	A0A218MKQ4	uncultured_virus	30.9	2.8e-09
AUI76047.1|863814_864600_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
AUI76048.1|864628_865255_-	repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	53.6	8.9e-13
AUI77131.1|865420_865669_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76049.1|865731_865950_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76050.1|866110_867388_-|transposase	transposase	transposase	Q6V7R1	Burkholderia_virus	23.7	4.5e-11
AUI76051.1|867662_869606_+	peptidase M13	NA	E3T4I7	Cafeteria_roenbergensis_virus	28.2	3.6e-60
AUI76052.1|869663_870845_-	cyclopropane-fatty-acyl-phospholipid synthase	NA	A0A2K9L4K8	Tupanvirus	36.1	4.7e-47
AUI76053.1|870904_871519_-	acyl-phosphate glycerol 3-phosphate acyltransferase	NA	NA	NA	NA	NA
AUI76054.1|871584_872616_+	methyltransferase	NA	NA	NA	NA	NA
AUI76055.1|872777_873551_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
AUI76056.1|873584_874610_+	translation elongation factor Ts	NA	NA	NA	NA	NA
AUI76057.1|874748_875474_+	UMP kinase	NA	NA	NA	NA	NA
AUI76058.1|875473_876031_+	ribosome recycling factor	NA	NA	NA	NA	NA
AUI76059.1|876033_876768_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	39.7	5.0e-23
AUI76060.1|876769_877585_+	CDP-diglyceride synthetase	NA	NA	NA	NA	NA
AUI76061.1|877595_878852_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
878276:878290	attL	TGGTCAAAAGATTAA	NA	NA	NA	NA
AUI76062.1|878894_880592_+|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
AUI76063.1|880597_884914_+	PolC-type DNA polymerase III	NA	A0A0A7RWA3	Clostridium_phage	34.1	1.2e-18
AUI76064.1|885023_885500_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
AUI77132.1|885519_886701_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
AUI77133.1|886730_887006_+	DNA-binding protein	NA	NA	NA	NA	NA
AUI76065.1|887008_887320_+	50S ribosomal protein L7	NA	NA	NA	NA	NA
AUI76066.1|887324_889937_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	24.5	9.7e-21
AUI76067.1|889956_890322_+	ribosome-binding factor A	NA	NA	NA	NA	NA
AUI76068.1|890373_891267_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
AUI76069.1|891272_892235_+	riboflavin biosynthesis protein RibF	NA	A0A1V0SD03	Indivirus	30.1	6.1e-05
AUI76070.1|892404_893454_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
AUI76071.1|893469_894069_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
AUI76072.1|894086_895913_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	49.5	1.8e-143
AUI76073.1|895994_897149_+	molecular chaperone DnaJ	NA	A0A167RAM8	Powai_lake_megavirus	29.0	1.4e-19
AUI76074.1|898592_900431_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.1	4.0e-21
AUI76075.1|900433_901123_+	class A sortase	NA	NA	NA	NA	NA
AUI76076.1|901243_903517_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	35.9	3.7e-77
AUI76077.1|903621_904149_+	adenine phosphoribosyltransferase	NA	NA	NA	NA	NA
AUI76078.1|904292_905222_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	59.5	2.2e-100
AUI77134.1|905237_905996_-	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
AUI76079.1|907788_908286_+	lactocepin S-layer protein	NA	NA	NA	NA	NA
AUI76080.1|908353_910627_-	proton-efflux P-type ATPase	NA	A7IUR5	Paramecium_bursaria_Chlorella_virus	25.3	1.6e-43
AUI76081.1|910755_911610_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AUI76082.1|912684_913875_+|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	58.2	1.3e-124
AUI76083.1|916334_916871_+	holo-ACP synthase CitX	NA	NA	NA	NA	NA
AUI76084.1|917120_918299_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76085.1|918370_919537_+	GNAT family acetyltransferase	NA	NA	NA	NA	NA
AUI76086.1|919716_920322_+	transcriptional regulator	NA	NA	NA	NA	NA
AUI76087.1|920488_921517_+|integrase	integrase	integrase	H7BWC8	unidentified_phage	34.6	4.1e-47
923376:923390	attR	TTAATCTTTTGACCA	NA	NA	NA	NA
>prophage 8
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	963091	1019211	2191149	transposase,integrase,tRNA	Bacillus_phage(11.76%)	53	963158:963173	1021624:1021639
AUI76123.1|963091_964390_+|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	27.8	2.3e-47
963158:963173	attL	TGGTTAACAGATAAAA	NA	NA	NA	NA
AUI76124.1|964475_965120_+	DNA replication protein DnaD	NA	A0A0N7AE27	Bacillus_phage	36.0	4.2e-10
AUI76125.1|965121_965742_+	endonuclease III	NA	NA	NA	NA	NA
AUI76126.1|965957_968237_-	penicillin-binding protein	NA	NA	NA	NA	NA
AUI76127.1|968233_968866_-	Holliday junction resolvase RecU	NA	A0A1B1P798	Bacillus_phage	30.6	6.0e-17
AUI76128.1|968929_969499_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76129.1|969589_970006_+	cell division protein	NA	NA	NA	NA	NA
AUI77137.1|970469_971594_+	RNA methyltransferase	NA	NA	NA	NA	NA
AUI76130.1|972842_973175_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76131.1|973171_974848_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
AUI76132.1|974854_975319_+	signal peptidase II	NA	NA	NA	NA	NA
AUI76133.1|975311_976223_+	pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	29.1	1.0e-09
AUI76134.1|976225_977281_+	carbamoyl phosphate synthase small subunit	NA	NA	NA	NA	NA
AUI76135.1|977284_980476_+	carbamoyl phosphate synthase large subunit	NA	NA	NA	NA	NA
AUI76136.1|980543_982238_-	hypothetical protein	NA	Q84500	Paramecium_bursaria_Chlorella_virus	40.0	3.2e-09
AUI76137.1|982445_983852_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76138.1|983993_984410_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AUI76139.1|984485_985367_+	fatty acid-binding protein DegV	NA	A0A0N9SI50	Staphylococcus_phage	35.9	4.4e-10
AUI76140.1|985569_986652_-	tyrosine recombinase XerS	NA	NA	NA	NA	NA
AUI76141.1|987166_987622_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76142.1|987628_988120_+	adenylate kinase	NA	A0A097BYE2	Leuconostoc_phage	36.1	5.0e-19
AUI76143.1|988165_988774_-	DUF5052 domain-containing protein	NA	A0A2K9VCV0	Lactobacillus_phage	44.2	1.8e-39
AUI76144.1|989102_990281_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76145.1|992453_992807_+	transcriptional regulator	NA	NA	NA	NA	NA
AUI76146.1|992837_993422_-	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	44.6	8.2e-29
AUI76147.1|993506_994442_-	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
AUI76148.1|994496_995459_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AUI76149.1|995609_998066_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.3	3.0e-96
AUI76150.1|998082_1000029_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	41.0	2.7e-116
AUI76151.1|1000125_1000752_+	acyl-phosphate glycerol 3-phosphate acyltransferase	NA	NA	NA	NA	NA
AUI76152.1|1001057_1002275_-	hypothetical protein	NA	A0A0K0N6W5	Gordonia_phage	28.5	4.0e-33
AUI76153.1|1002402_1002870_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA	NA
AUI76154.1|1002958_1003477_-	GCN5 family acetyltransferase	NA	NA	NA	NA	NA
AUI76155.1|1003690_1004551_+	Sir2 silent information regulator family NAD-dependent deacetylase	NA	NA	NA	NA	NA
AUI76156.1|1005287_1005878_+	Sir2 silent information regulator family NAD-dependent deacetylase	NA	NA	NA	NA	NA
AUI76157.1|1006547_1006787_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76158.1|1006942_1007701_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA	NA
AUI76159.1|1007852_1008203_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76160.1|1008199_1009033_-	hydrolase	NA	NA	NA	NA	NA
AUI76161.1|1009190_1009658_-	GCN5 family acetyltransferase	NA	NA	NA	NA	NA
AUI76162.1|1009721_1011062_+	glutathione reductase	NA	NA	NA	NA	NA
AUI76163.1|1011359_1011638_+	sodium:proton antiporter	NA	NA	NA	NA	NA
AUI76164.1|1011894_1012515_-|integrase	integrase	integrase	E2ELN7	Clostridium_phage	36.4	7.4e-20
AUI76165.1|1012630_1013269_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76166.1|1013580_1014081_-	DNA methyltransferase	NA	A0A1S5PRR3	Streptococcus_phage	45.4	1.6e-33
AUI77138.1|1014192_1015113_-|integrase	integrase	integrase	A0A0C5AC89	Paenibacillus_phage	39.2	1.6e-34
AUI76167.1|1015193_1015481_-|transposase	transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	45.1	2.7e-09
AUI76168.1|1015462_1015822_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76169.1|1016043_1016904_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUI77139.1|1016915_1017656_-	glutamine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.2	4.1e-33
AUI76170.1|1017665_1018340_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AUI76171.1|1018405_1018825_+	DDE endonuclease	NA	NA	NA	NA	NA
AUI76172.1|1018896_1019211_+|transposase	transposase	transposase	NA	NA	NA	NA
1021624:1021639	attR	TTTTATCTGTTAACCA	NA	NA	NA	NA
>prophage 9
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	1026355	1092198	2191149	transposase	Erysipelothrix_phage(33.33%)	46	NA	NA
AUI76181.1|1026355_1026670_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76182.1|1026843_1027497_+	endonuclease III	NA	NA	NA	NA	NA
AUI76183.1|1027668_1029381_+|transposase	transposase	transposase	A0ZS58	Staphylococcus_virus	36.7	3.0e-87
AUI76184.1|1029366_1029642_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76185.1|1029819_1030257_+	LytTR family transcriptional regulator	NA	NA	NA	NA	NA
AUI76186.1|1030258_1030672_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76187.1|1030707_1031205_-	acetyltransferase	NA	NA	NA	NA	NA
AUI76188.1|1031208_1032792_-	ATPase	NA	NA	NA	NA	NA
AUI76189.1|1032758_1032971_+	transcriptional regulator	NA	NA	NA	NA	NA
AUI76190.1|1033006_1035745_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AUI76191.1|1036373_1036688_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76192.1|1037938_1039342_+	dipeptidase PepV	NA	NA	NA	NA	NA
AUI76193.1|1040697_1042077_-	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
AUI76194.1|1042459_1042795_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76195.1|1043823_1044063_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76196.1|1044251_1045442_-|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	59.0	3.0e-126
AUI76197.1|1045594_1046146_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76198.1|1046280_1046511_-	replication-associated protein RepA	NA	NA	NA	NA	NA
AUI76199.1|1046674_1047208_-	hypoxanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
AUI76200.1|1048802_1049000_-	hypothetical protein	NA	A0A2K5B2C5	Erysipelothrix_phage	74.5	2.7e-16
AUI77140.1|1049066_1050314_-	DNA replication initiation protein	NA	NA	NA	NA	NA
AUI77141.1|1051778_1052681_-	homocysteine S-methyltransferase	NA	NA	NA	NA	NA
AUI76201.1|1053021_1054209_-	amidohydrolase	NA	NA	NA	NA	NA
AUI76202.1|1054906_1056253_-	serine/threonine protein kinase	NA	NA	NA	NA	NA
AUI76203.1|1056534_1056900_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AUI76204.1|1057078_1059025_+	peptidase M13	NA	E3T4I7	Cafeteria_roenbergensis_virus	28.8	3.0e-59
AUI76205.1|1062383_1062803_-	DDE endonuclease	NA	NA	NA	NA	NA
AUI76206.1|1062821_1063055_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76207.1|1069764_1070481_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AUI76208.1|1072863_1074042_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI77142.1|1074207_1077930_-	ATPase	NA	NA	NA	NA	NA
AUI76209.1|1077942_1078542_-	ATP-binding protein	NA	NA	NA	NA	NA
AUI76210.1|1078541_1079147_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76211.1|1079264_1081232_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76212.1|1082855_1083485_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
AUI76213.1|1083503_1084055_-	DNA-binding protein	NA	NA	NA	NA	NA
AUI76214.1|1084054_1084285_-	copper-binding protein	NA	NA	NA	NA	NA
AUI76215.1|1084307_1086209_-	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	34.5	6.1e-89
AUI76216.1|1086326_1086677_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76217.1|1086673_1086880_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76218.1|1087110_1088475_-	NAD(FAD)-dependent dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	22.6	3.4e-09
AUI76219.1|1088606_1088993_-	FMN-binding protein	NA	NA	NA	NA	NA
AUI76220.1|1089065_1089998_-	transcriptional regulator	NA	NA	NA	NA	NA
AUI76221.1|1090101_1091280_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76222.1|1091461_1091920_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76223.1|1091934_1092198_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 10
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	1097370	1152474	2191149	transposase,bacteriocin	Streptococcus_phage(20.0%)	54	NA	NA
AUI76230.1|1097370_1098549_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76231.1|1099332_1099785_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76232.1|1099996_1100713_-	antibiotic transporter permease	NA	NA	NA	NA	NA
AUI76233.1|1100712_1101447_-	multidrug ABC transporter permease	NA	NA	NA	NA	NA
AUI76234.1|1101450_1102212_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.7	1.1e-22
AUI76235.1|1102223_1102697_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76236.1|1102711_1102960_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76237.1|1102952_1104557_-	ABC transporter permease	NA	A0A2H4UU96	Bodo_saltans_virus	29.4	5.1e-12
AUI76238.1|1104531_1104819_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76239.1|1105170_1105503_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76240.1|1105581_1105896_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76241.1|1105967_1106387_-	DDE endonuclease	NA	NA	NA	NA	NA
AUI76242.1|1108134_1109250_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76243.1|1109554_1111069_-	ABC-F type ribosomal protection protein	NA	A0A1B0RXA0	Streptococcus_phage	23.7	3.5e-23
AUI76244.1|1111386_1111611_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76245.1|1111657_1113517_-	DNA mismatch repair protein MutS	NA	F2Y1C6	Organic_Lake_phycodnavirus	32.1	1.5e-07
AUI76246.1|1113728_1114157_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76247.1|1114153_1114588_-	histidine kinase	NA	NA	NA	NA	NA
AUI76248.1|1114772_1115360_-	non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
AUI76249.1|1115650_1115863_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76250.1|1115946_1118451_-	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	32.0	1.2e-137
AUI76251.1|1118466_1118979_-	streptothricin acetyltransferase	NA	E4ZFP7	Streptococcus_phage	30.2	8.3e-17
AUI76252.1|1119215_1119683_-	regulator	NA	NA	NA	NA	NA
AUI76253.1|1119880_1120180_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76254.1|1121581_1121929_-	addiction module toxin RelE	NA	NA	NA	NA	NA
AUI76255.1|1121928_1122207_-	prevent-host-death family protein	NA	NA	NA	NA	NA
AUI76256.1|1126032_1126524_-	DUF5067 domain-containing protein	NA	NA	NA	NA	NA
AUI76257.1|1126633_1126993_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76258.1|1127383_1128007_-	ADP-ribose pyrophosphatase	NA	NA	NA	NA	NA
AUI76259.1|1128009_1128771_-	phosphorylase	NA	NA	NA	NA	NA
AUI76260.1|1128786_1129206_-	cytidine deaminase	NA	NA	NA	NA	NA
AUI76261.1|1129469_1129946_-	GNAT family acetyltransferase	NA	NA	NA	NA	NA
AUI76262.1|1130035_1130473_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76263.1|1130652_1131831_+|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	57.5	1.3e-121
AUI76264.1|1131941_1132652_+	GNAT family acetyltransferase	NA	NA	NA	NA	NA
AUI76265.1|1132740_1133922_+	permease	NA	NA	NA	NA	NA
AUI76266.1|1133987_1134569_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76267.1|1134658_1135276_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76268.1|1135538_1136084_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76269.1|1136672_1137050_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76270.1|1137062_1137803_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76271.1|1137809_1139393_-	ABC transporter permease	NA	A0A076FI99	Aureococcus_anophage	26.5	1.1e-19
AUI76272.1|1139382_1140987_-|bacteriocin	bacteriocin ABC transporter	bacteriocin	A0A076FI99	Aureococcus_anophage	21.6	1.7e-15
AUI76273.1|1141160_1141511_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76274.1|1141813_1142053_-	hypothetical protein	NA	NA	NA	NA	NA
AUI77143.1|1142052_1142265_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76275.1|1142270_1143557_-	peptidase T	NA	NA	NA	NA	NA
AUI76276.1|1143716_1145051_+	MATE family efflux transporter	NA	NA	NA	NA	NA
AUI76277.1|1145099_1146305_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76278.1|1146477_1147656_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76279.1|1147941_1148658_-	ABC transporter	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.6	3.5e-13
AUI76280.1|1149160_1150339_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76281.1|1150820_1151111_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76282.1|1151295_1152474_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 12
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	1393584	1448358	2191149	transposase,integrase,tRNA	Lactobacillus_virus(18.18%)	50	1439558:1439580	1445828:1445850
AUI76481.1|1393584_1394763_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76482.1|1394963_1395296_-	DUF3397 domain-containing protein	NA	NA	NA	NA	NA
AUI76483.1|1395565_1396105_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
AUI76484.1|1396104_1396956_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
AUI76485.1|1397001_1398006_-	rod shape-determining protein	NA	NA	NA	NA	NA
AUI76486.1|1398101_1398725_-	DNA repair protein RadC	NA	NA	NA	NA	NA
AUI76487.1|1398763_1399441_-	hydrolase	NA	NA	NA	NA	NA
AUI76488.1|1399430_1400705_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
AUI76489.1|1400705_1403345_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	43.4	4.8e-161
AUI76490.1|1405766_1407083_-|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	38.9	1.5e-65
AUI76491.1|1407353_1408280_-	bactoprenol glucosyl transferase	NA	V5USA4	Oenococcus_phage	49.3	1.7e-76
AUI76492.1|1408276_1408693_-	dolichyl-phosphate beta-D-mannosyltransferase	NA	NA	NA	NA	NA
AUI76493.1|1411843_1412380_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76494.1|1412868_1414086_-|tRNA	tRNA 4-thiouridine(8) synthase ThiI	tRNA	NA	NA	NA	NA
AUI76495.1|1414085_1415246_-	aminotransferase V	NA	A0A1X6WFP1	Pacmanvirus	31.7	1.7e-38
AUI76496.1|1415337_1417047_-	septation ring formation regulator EzrA	NA	NA	NA	NA	NA
AUI76497.1|1417169_1418348_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76498.1|1418709_1419321_+	30S ribosomal protein S4	NA	NA	NA	NA	NA
AUI76499.1|1419410_1419878_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76500.1|1419877_1421191_+	recombinase RarA	NA	A0A127AWE7	Bacillus_phage	49.3	6.2e-101
AUI76501.1|1421329_1422736_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76502.1|1423097_1423379_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76503.1|1423446_1423911_+	universal stress protein UspA	NA	NA	NA	NA	NA
AUI76504.1|1423976_1425170_-	rod shape-determining protein RodA	NA	NA	NA	NA	NA
AUI76505.1|1425191_1425419_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76506.1|1425734_1426724_-	rod shape-determining protein	NA	NA	NA	NA	NA
AUI76507.1|1426807_1427038_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76508.1|1427101_1427542_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
AUI76509.1|1427553_1428993_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
AUI76510.1|1429015_1429978_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
AUI76511.1|1429988_1431500_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
AUI76512.1|1431514_1432063_-	ATP synthase F1 subunit delta	NA	NA	NA	NA	NA
AUI76513.1|1432062_1432572_-	ATP synthase F0 subunit B	NA	NA	NA	NA	NA
AUI77150.1|1432623_1432848_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76514.1|1432876_1433590_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
AUI76515.1|1433713_1434343_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AUI76516.1|1434426_1435428_-	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	38.1	1.2e-48
AUI76517.1|1435433_1436276_-	protein-(glutamine-N5) methyltransferase, release factor-specific	NA	NA	NA	NA	NA
AUI76518.1|1436268_1437357_-	peptide chain release factor 1	NA	W8EDB3	Pseudomonas_phage	44.6	1.4e-05
AUI76519.1|1437373_1437973_-	thymidine kinase	NA	C1KFH3	Lactobacillus_virus	50.8	2.4e-47
AUI76520.1|1438123_1439476_+	UDP-N-acetylmuramyl peptide synthase	NA	NA	NA	NA	NA
1439558:1439580	attL	TTACTATTGAGATATTGGGGCTC	NA	NA	NA	NA
AUI76521.1|1439653_1440811_-|integrase	integrase	integrase	P97010	Streptococcus_pyogenes_phage	38.2	4.9e-57
AUI76522.1|1440949_1441537_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76523.1|1441685_1441886_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76524.1|1441888_1442113_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76525.1|1442115_1442391_+	DNA-packaging protein	NA	NA	NA	NA	NA
AUI77151.1|1442715_1444032_+	hypothetical protein	NA	U3PCP1	Lactobacillus_phage	44.2	9.1e-92
AUI76526.1|1445132_1445498_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76527.1|1446065_1447079_+	esterase	NA	A0A1D8EXR7	Mycobacterium_phage	26.1	1.2e-06
1445828:1445850	attR	TTACTATTGAGATATTGGGGCTC	NA	NA	NA	NA
AUI76528.1|1447179_1448358_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 13
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	1454601	1591782	2191149	transposase,protease,tRNA	Streptococcus_phage(31.03%)	114	NA	NA
AUI76532.1|1454601_1455792_+|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	54.9	2.0e-114
AUI76533.1|1455884_1457342_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	33.8	3.6e-33
AUI76534.1|1457341_1458064_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	36.9	1.6e-37
AUI76535.1|1458063_1458456_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76536.1|1458490_1459456_-	mannose-6-phosphate isomerase, class I	NA	NA	NA	NA	NA
AUI76537.1|1462098_1463283_-	acetate kinase	NA	NA	NA	NA	NA
AUI76538.1|1463331_1464333_-	DNA methyltransferase	NA	NA	NA	NA	NA
AUI76539.1|1464502_1465003_-	competence protein ComGF	NA	NA	NA	NA	NA
AUI76540.1|1465010_1465280_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76541.1|1465276_1465708_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
AUI76542.1|1465676_1466027_-	competence protein ComGC	NA	NA	NA	NA	NA
AUI77152.1|1466037_1467039_-	type II secretion system protein F	NA	NA	NA	NA	NA
AUI76543.1|1467007_1467982_-	competence protein	NA	NA	NA	NA	NA
AUI76544.1|1468130_1468859_-	transcriptional regulator	NA	NA	NA	NA	NA
AUI76545.1|1468949_1469465_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76546.1|1469559_1469745_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
AUI76547.1|1469843_1471028_-|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	59.1	1.8e-123
AUI76548.1|1472807_1473764_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AUI76549.1|1475438_1477460_-	PTS beta-glucoside transporter subunit EIIBCA	NA	NA	NA	NA	NA
AUI76550.1|1478642_1479797_+	glycerate kinase	NA	NA	NA	NA	NA
AUI76551.1|1479801_1480269_-	protein tyrosine phosphatase	NA	NA	NA	NA	NA
AUI76552.1|1480825_1482004_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76553.1|1482382_1483198_-	HAD family hydrolase	NA	NA	NA	NA	NA
AUI76554.1|1483207_1484023_-	HAD family hydrolase	NA	NA	NA	NA	NA
AUI76555.1|1484117_1485470_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AUI76556.1|1485500_1486460_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76557.1|1486456_1487299_-	TIGR00159 family protein	NA	NA	NA	NA	NA
AUI76558.1|1487356_1488430_-	spermidine/putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUI76559.1|1488426_1489242_-	spermidine/putrescine ABC transporter permease	NA	NA	NA	NA	NA
AUI76560.1|1489238_1490051_-	spermidine/putrescine ABC transporter permease	NA	NA	NA	NA	NA
AUI76561.1|1490040_1491144_-	spermidine/putrescine import ATP-binding protein PotA	NA	Q6GZ03	Mycoplasma_phage	41.1	2.5e-34
AUI76562.1|1491203_1492100_-	UDP-N-acetylenolpyruvoylglucosamine reductase	NA	NA	NA	NA	NA
AUI76563.1|1492197_1492731_+	exonuclease	NA	M1PFD8	Streptococcus_phage	36.6	6.8e-22
AUI76564.1|1492737_1493238_-|tRNA	tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE	tRNA	NA	NA	NA	NA
AUI76565.1|1493237_1494227_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
AUI76566.1|1494238_1494937_-	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	43.0	2.7e-42
AUI76567.1|1495005_1495887_+	HAD family hydrolase	NA	NA	NA	NA	NA
AUI76568.1|1495893_1496415_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76569.1|1496745_1497504_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
AUI76570.1|1497529_1498741_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
AUI76571.1|1498853_1499870_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AUI76572.1|1499925_1500957_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76573.1|1505769_1506585_+	sugar-phosphatase	NA	NA	NA	NA	NA
AUI76574.1|1506639_1508265_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76575.1|1508451_1509036_+	ATP-dependent Clp endopeptidase, proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	54.9	3.7e-53
AUI76576.1|1509087_1510023_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	35.2	1.4e-46
AUI76577.1|1510015_1511059_-	hypothetical protein	NA	A1IMD5	Streptococcus_phage	50.2	2.4e-87
AUI76578.1|1511069_1511945_-	RNase adaptor protein RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.3	1.2e-07
AUI76579.1|1512033_1512576_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76580.1|1512640_1515481_-	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	56.1	1.7e-305
AUI76581.1|1515470_1517519_-	excinuclease ABC subunit B	NA	NA	NA	NA	NA
AUI76582.1|1517621_1519346_-	phosphoglucomutase	NA	A0A1X9I671	Streptococcus_phage	46.0	2.6e-147
AUI77153.1|1519446_1519899_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
AUI76583.1|1520078_1521263_-|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	58.8	8.9e-123
AUI76584.1|1521650_1522829_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76585.1|1523067_1524327_+|transposase	transposase	transposase	Q6V7R1	Burkholderia_virus	22.8	8.9e-12
AUI76586.1|1524567_1525740_+|transposase	transposase	transposase	A0A1X9I5Z0	Streptococcus_phage	37.9	4.6e-55
AUI76587.1|1525824_1527003_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76588.1|1527488_1528508_-	glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AUI76589.1|1528549_1529389_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
AUI76590.1|1529381_1530350_-	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
AUI76591.1|1530366_1530645_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76592.1|1530652_1531651_-	peptide chain release factor 2	NA	NA	NA	NA	NA
AUI76593.1|1531836_1534236_-	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
AUI76594.1|1534375_1534921_-	ribosomal subunit interface protein	NA	NA	NA	NA	NA
AUI76595.1|1535001_1535697_-	competence protein	NA	NA	NA	NA	NA
AUI76596.1|1535693_1536980_-	competence protein ComF	NA	A0A1X9I5S6	Streptococcus_phage	43.8	2.9e-82
AUI76597.1|1537024_1537687_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	43.8	3.4e-39
AUI76598.1|1537713_1538871_-	undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
AUI76599.1|1538978_1540610_-	ribonuclease Y	NA	NA	NA	NA	NA
AUI76600.1|1540729_1541827_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	61.8	7.2e-119
AUI76601.1|1542010_1542571_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
AUI76602.1|1542593_1543712_-	transcriptional regulator	NA	NA	NA	NA	NA
AUI76603.1|1543779_1544508_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AUI76604.1|1544508_1545765_-	peptidase M16	NA	A0A2P1EIE5	Megavirus	28.1	1.0e-12
AUI76605.1|1545761_1546976_-|protease	protease	protease	NA	NA	NA	NA
AUI76606.1|1546962_1549380_-	cell division protein FtsK	NA	Q853W3	Mycobacterium_phage	48.0	1.7e-83
AUI76607.1|1549400_1549790_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76608.1|1549789_1550350_-	RNA methyltransferase	NA	NA	NA	NA	NA
AUI76609.1|1550400_1551600_-	AI-2E family transporter	NA	NA	NA	NA	NA
AUI76610.1|1552068_1554825_-	haloacid dehalogenase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	29.6	1.1e-75
AUI76611.1|1554977_1556006_+	3-carboxymuconate cyclase	NA	NA	NA	NA	NA
AUI76612.1|1556112_1556805_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76613.1|1558725_1559622_-	RNA pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	30.5	2.3e-06
AUI76614.1|1559605_1560418_-	NAD kinase	NA	NA	NA	NA	NA
AUI76615.1|1560414_1561047_-	GTP pyrophosphokinase	NA	NA	NA	NA	NA
AUI76616.1|1561170_1561785_+	adenylate cyclase	NA	NA	NA	NA	NA
AUI76617.1|1561863_1562481_+	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
AUI76618.1|1562489_1563338_-	competence protein	NA	NA	NA	NA	NA
AUI76619.1|1563415_1564156_-	adaptor protein MecA	NA	NA	NA	NA	NA
AUI76620.1|1564247_1564646_-	transcriptional regulator Spx	NA	NA	NA	NA	NA
AUI76621.1|1564877_1566611_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
AUI76622.1|1566610_1566877_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
AUI76623.1|1566989_1567184_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76624.1|1567461_1568868_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76625.1|1569806_1571996_+|protease	Clp protease ClpE	protease	A0A1C3S747	Escherichia_phage	40.5	8.8e-124
AUI76626.1|1572147_1572429_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76627.1|1572496_1574068_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	26.2	5.5e-35
AUI76628.1|1574067_1574940_-	magnesium/cobalt efflux protein	NA	NA	NA	NA	NA
AUI76629.1|1575047_1575509_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76630.1|1575510_1575993_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76631.1|1576003_1576819_-	recombination regulator RecX	NA	NA	NA	NA	NA
AUI76632.1|1576940_1578323_+	23S rRNA (uracil-5-)-methyltransferase RumA	NA	A0A2K5B251	Erysipelothrix_phage	33.2	3.9e-69
AUI76633.1|1579034_1579619_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76634.1|1579667_1580123_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76635.1|1580126_1580396_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76636.1|1580749_1581838_+|transposase	transposase	transposase	A0A1X9I5Z0	Streptococcus_phage	38.5	4.9e-51
AUI76637.1|1582075_1582423_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI77154.1|1582462_1582693_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76638.1|1582667_1584005_+|transposase	transposase	transposase	S5VTD3	Leptospira_phage	34.4	7.4e-49
AUI76639.1|1584597_1587462_-	peptide synthetase	NA	A0A2K9L3I8	Tupanvirus	27.0	1.9e-33
AUI76640.1|1587878_1589057_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76641.1|1590247_1590454_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76642.1|1590603_1591782_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 14
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	1596006	1663298	2191149	transposase	Lactobacillus_virus(20.0%)	51	NA	NA
AUI76647.1|1596006_1597335_-|transposase	transposase	transposase	A0A286QMQ9	Streptococcus_phage	41.3	2.7e-59
AUI76648.1|1597399_1598299_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	48.1	6.4e-73
AUI76649.1|1598360_1599284_-	ribonuclease BN-like family protein	NA	NA	NA	NA	NA
AUI76650.1|1599292_1600120_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
AUI76651.1|1600263_1600710_+	flavodoxin	NA	NA	NA	NA	NA
AUI76652.1|1600702_1601242_+	teichoic acid glycosylation protein	NA	NA	NA	NA	NA
AUI76653.1|1601265_1602408_-	UDP-N-acetylglucosamine 2-epimerase	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	30.3	5.5e-29
AUI76654.1|1602515_1602704_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76655.1|1602871_1604200_-	PTS cellobiose transporter subunit IIC	NA	NA	NA	NA	NA
AUI76656.1|1604196_1605429_-	helicase	NA	A0A1B1IS59	uncultured_Mediterranean_phage	28.5	1.2e-34
AUI76657.1|1605428_1606133_-	lysozyme	NA	NA	NA	NA	NA
AUI76658.1|1607473_1608043_-	hypoxanthine phosphoribosyltransferase	NA	A0A2K9L634	Tupanvirus	27.6	4.9e-10
AUI76659.1|1608149_1609511_-	hemolysin	NA	NA	NA	NA	NA
AUI76660.1|1610325_1610583_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76661.1|1610777_1611956_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76662.1|1613451_1614117_-	hypothetical protein	NA	NA	NA	NA	NA
AUI77155.1|1614389_1615595_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76663.1|1617476_1618667_-|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	58.2	5.6e-125
AUI76664.1|1619997_1620846_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76665.1|1624402_1625251_-	patatin family protein	NA	NA	NA	NA	NA
AUI76666.1|1625318_1627718_-	phosphoketolase	NA	NA	NA	NA	NA
AUI76667.1|1628784_1629150_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76668.1|1629236_1629560_-	DNA methyltransferase	NA	NA	NA	NA	NA
AUI76669.1|1629559_1630963_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
AUI76670.1|1630955_1631417_-	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
AUI76671.1|1631403_1632642_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	41.8	1.0e-97
AUI76672.1|1632616_1633894_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
AUI76673.1|1633905_1634700_-	Fe-S cluster assembly ATPase SufC	NA	A0A1M7XV31	Cedratvirus	27.6	7.3e-12
AUI76674.1|1635821_1636640_+	sugar-phosphatase	NA	NA	NA	NA	NA
AUI76675.1|1636704_1637028_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76676.1|1637147_1638338_-|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	56.7	4.2e-120
AUI76677.1|1638435_1638630_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76678.1|1639429_1640356_-	purine nucleosidase	NA	NA	NA	NA	NA
AUI76679.1|1640472_1642488_-	potassium transporter Kup	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	34.6	5.0e-65
AUI76680.1|1642597_1643776_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76681.1|1643926_1644619_-	ribose 5-phosphate isomerase A	NA	NA	NA	NA	NA
AUI76682.1|1644618_1645545_-	ribokinase	NA	A0A2H4N7X4	Lake_Baikal_phage	37.5	6.3e-07
AUI76683.1|1645628_1646432_-	DUF4931 domain-containing protein	NA	NA	NA	NA	NA
AUI76684.1|1648194_1648464_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76685.1|1648482_1649826_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76686.1|1649974_1651276_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUI76687.1|1651474_1652752_+|transposase	transposase	transposase	Q6V7R1	Burkholderia_virus	22.9	3.4e-11
AUI76688.1|1653448_1654633_-|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	58.5	1.3e-121
AUI76689.1|1655214_1655868_-	glutamine ABC transporter permease	NA	NA	NA	NA	NA
AUI76690.1|1655882_1656524_-	glutamine ABC transporter permease	NA	NA	NA	NA	NA
AUI76691.1|1656523_1657342_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUI76692.1|1657352_1658093_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.4	7.2e-38
AUI76693.1|1660293_1660926_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	39.5	6.2e-38
AUI76694.1|1660956_1661865_-	MFS transporter	NA	NA	NA	NA	NA
AUI76695.1|1662492_1662912_+	DDE endonuclease	NA	NA	NA	NA	NA
AUI76696.1|1662983_1663298_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 15
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	1684192	1742965	2191149	transposase,tRNA	Lactococcus_phage(12.5%)	43	NA	NA
AUI76711.1|1684192_1685599_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76712.1|1685816_1686017_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	71.4	1.4e-20
AUI76713.1|1687192_1688599_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76714.1|1689087_1690440_-	23S rRNA (uracil-5-)-methyltransferase RumA	NA	F5CA72	Streptococcus_phi-m46.1-like_phage	48.2	1.9e-116
AUI76715.1|1690804_1692181_+	Na+/H+ antiporter NhaC	NA	NA	NA	NA	NA
AUI76716.1|1692779_1693958_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76717.1|1694121_1694826_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76718.1|1694869_1695562_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76719.1|1695628_1696549_-	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	25.8	2.1e-18
AUI76720.1|1696573_1698004_-|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit B	tRNA	NA	NA	NA	NA
AUI76721.1|1698008_1699448_-|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit A	tRNA	NA	NA	NA	NA
AUI76722.1|1699447_1699756_-|tRNA	asparaginyl/glutamyl-tRNA amidotransferase subunit C	tRNA	NA	NA	NA	NA
AUI77157.1|1699769_1700897_-	sex pheromone biosynthesis protein	NA	NA	NA	NA	NA
AUI76723.1|1700930_1702937_-	DNA ligase (NAD(+)) LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	7.1e-104
AUI76724.1|1702977_1705224_-	ATP-dependent DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.3	6.9e-132
AUI76725.1|1705309_1705957_-	N-acetylmuramidase	NA	S5M633	Brevibacillus_phage	47.7	1.0e-27
AUI76726.1|1706194_1706665_-	SprT family protein	NA	NA	NA	NA	NA
AUI76727.1|1706652_1707351_-	glycosyl transferase	NA	L7RBS6	Acanthamoeba_polyphaga_moumouvirus	26.5	9.6e-08
AUI76728.1|1707353_1708784_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
AUI76729.1|1708788_1709943_-	CDP-glycerol--glycerophosphate glycerophosphotransferase	NA	NA	NA	NA	NA
AUI76730.1|1712955_1714197_-|transposase	transposase	transposase	A0A0P0IJS6	Lactobacillus_phage	57.0	9.1e-118
AUI76731.1|1714392_1715223_-	NAD(+) synthase	NA	G3MA24	Bacillus_virus	51.4	5.7e-68
AUI76732.1|1715219_1716698_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	46.9	1.1e-114
AUI76733.1|1716785_1717886_-	galactosyltransferase	NA	NA	NA	NA	NA
AUI76734.1|1717893_1718622_-	acetylglucosaminyldiphospho-UDP acetyl-beta-D-mannosaminyltransferase	NA	NA	NA	NA	NA
AUI76735.1|1719946_1720333_+	glycerol-3-phosphate cytidylyltransferase	NA	A0A0F7LBI5	uncultured_marine_virus	47.2	7.1e-13
AUI76736.1|1720396_1721098_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AUI76737.1|1721186_1722302_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76738.1|1722691_1723243_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76739.1|1726590_1727286_-	glycerophosphodiester phosphodiesterase	NA	M1ICP4	Paramecium_bursaria_Chlorella_virus	25.8	1.8e-14
AUI77158.1|1727337_1727997_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AUI76740.1|1728555_1729134_-	phosphoglycerate mutase	NA	A0A1X9IGJ2	Lactococcus_phage	37.1	3.3e-22
AUI77159.1|1729203_1730262_-	surface exclusion protein	NA	NA	NA	NA	NA
AUI76741.1|1730399_1731095_-	hypothetical protein	NA	A0A249XZV3	Enterococcus_phage	50.0	3.2e-11
AUI76742.1|1732794_1733187_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76743.1|1733297_1733498_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76744.1|1733596_1733995_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76745.1|1734148_1735900_+|transposase	transposase	transposase	A0ZS58	Staphylococcus_virus	36.7	1.8e-87
AUI76746.1|1736106_1737348_-|transposase	transposase	transposase	A0A0P0IJS6	Lactobacillus_phage	57.5	9.7e-120
AUI76747.1|1737622_1738777_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
AUI76748.1|1738793_1739507_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AUI76749.1|1740519_1741926_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76750.1|1742107_1742965_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 16
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	1798676	1853812	2191149	transposase,protease	Enterobacteria_phage(25.0%)	40	NA	NA
AUI76792.1|1798676_1799918_-|transposase	transposase	transposase	A0A0P0IJS6	Lactobacillus_phage	56.7	2.0e-117
AUI76793.1|1800098_1800506_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76794.1|1800593_1801334_-	hypothetical protein	NA	A0A0A7NTY4	Lactobacillus_phage	83.1	6.8e-121
AUI76795.1|1802183_1803788_-	ABC transporter	NA	W8CYL7	Bacillus_phage	23.3	1.3e-15
AUI76796.1|1803959_1805366_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76797.1|1805515_1806430_+	prolyl aminopeptidase	NA	NA	NA	NA	NA
AUI76798.1|1806519_1807521_+	adenosine deaminase	NA	NA	NA	NA	NA
AUI76799.1|1807568_1808072_+	nucleoside 2-deoxyribosyltransferase	NA	C1KFI2	Lactobacillus_virus	31.2	1.2e-12
AUI76800.1|1808486_1808891_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76801.1|1809074_1810376_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUI76802.1|1810428_1811001_-	elongation factor P	NA	NA	NA	NA	NA
AUI76803.1|1811035_1811950_-	type I pantothenate kinase	NA	A0A1B1ISL9	uncultured_Mediterranean_phage	33.2	3.6e-31
AUI76804.1|1812008_1812569_+	arylesterase	NA	NA	NA	NA	NA
AUI76805.1|1814115_1816422_-	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
AUI76806.1|1816571_1817258_+|protease	metalloprotease	protease	NA	NA	NA	NA
AUI76807.1|1817319_1817970_+	fructose-2,6-bisphosphatase	NA	NA	NA	NA	NA
AUI76808.1|1818186_1819986_-	ABC transporter	NA	NA	NA	NA	NA
AUI76809.1|1819998_1820748_-	bacitracin ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	3.7e-34
AUI76810.1|1820894_1822166_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76811.1|1822254_1822926_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76812.1|1823349_1824354_-	L-asparaginase 1	NA	NA	NA	NA	NA
AUI76813.1|1826417_1826924_+	transcriptional regulator	NA	NA	NA	NA	NA
AUI76814.1|1828116_1828992_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	50.3	1.2e-76
AUI76815.1|1829156_1831262_-	ornithine decarboxylase	NA	NA	NA	NA	NA
AUI76816.1|1831486_1832938_+	amino acid permease	NA	NA	NA	NA	NA
AUI76817.1|1834576_1834783_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76818.1|1834895_1836194_-	MFS transporter	NA	NA	NA	NA	NA
AUI76819.1|1839406_1840585_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76820.1|1841053_1842040_-	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	37.8	1.3e-29
AUI76821.1|1842056_1842665_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	50.3	2.5e-44
AUI76822.1|1842686_1843571_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	57.5	4.7e-92
AUI76823.1|1843575_1844613_-	dTDP-glucose 4,6-dehydratase	NA	A0A291LAD7	Escherichia_phage	47.1	3.4e-86
AUI76824.1|1845124_1846297_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AUI76825.1|1846324_1847458_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76826.1|1847687_1849241_-	hypothetical protein	NA	A0A1S5SA14	Streptococcus_phage	27.4	3.4e-29
AUI76827.1|1849669_1850848_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76828.1|1850969_1851209_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76829.1|1851256_1851562_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76830.1|1851646_1852387_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76831.1|1852633_1853812_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 17
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	1858124	1921937	2191149	transposase,integrase	Streptococcus_phage(15.38%)	56	1862452:1862468	1869142:1869158
AUI76835.1|1858124_1859303_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76836.1|1859424_1859862_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76837.1|1861470_1862937_-	poly-gamma-glutamate biosynthesis protein	NA	NA	NA	NA	NA
1862452:1862468	attL	AATAAATAATAATACAA	NA	NA	NA	NA
AUI76838.1|1862960_1863926_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76839.1|1865505_1866411_-	glycosyltransferase	NA	NA	NA	NA	NA
AUI76840.1|1866413_1867523_-	UDP-galactopyranose mutase	NA	E4ZFQ1	Streptococcus_phage	73.4	1.3e-163
AUI76841.1|1867738_1868788_+|integrase	integrase	integrase	H7BWC8	unidentified_phage	34.6	5.4e-47
AUI77162.1|1869149_1870133_-	hypothetical protein	NA	NA	NA	NA	NA
1869142:1869158	attR	TTGTATTATTATTTATT	NA	NA	NA	NA
AUI76842.1|1871367_1871940_-	hypothetical protein	NA	A0A1V0SD50	Indivirus	35.3	6.6e-07
AUI76843.1|1871932_1873216_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76844.1|1873230_1874007_-	glycosyltransferase	NA	NA	NA	NA	NA
AUI76845.1|1874027_1875107_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76846.1|1875106_1875604_-	glycosyltransferase	NA	NA	NA	NA	NA
AUI76847.1|1875603_1876053_-	UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase	NA	NA	NA	NA	NA
AUI77163.1|1876068_1876719_-	multidrug MFS transporter	NA	NA	NA	NA	NA
AUI76848.1|1876838_1877609_-	exopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AUI76849.1|1877608_1878403_-	exopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AUI76850.1|1878413_1879298_-	exopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AUI76851.1|1879309_1880371_-	transcriptional regulator	NA	A0A1X9I5X1	Streptococcus_phage	31.1	1.1e-15
AUI76852.1|1880845_1882111_+	GTPase HflX	NA	NA	NA	NA	NA
AUI76853.1|1882132_1883143_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76854.1|1883353_1884286_-	hydrolase	NA	M9MUG9	Rhodococcus_phage	36.9	5.9e-13
AUI76855.1|1885289_1886396_+	plasmid replication initiation protein	NA	NA	NA	NA	NA
AUI76856.1|1886799_1887081_+	damage-inducible protein J	NA	NA	NA	NA	NA
AUI76857.1|1887127_1887313_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76858.1|1887389_1887668_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76859.1|1887690_1887900_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76860.1|1888170_1890231_+	nickase	NA	NA	NA	NA	NA
AUI76861.1|1890360_1890936_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76862.1|1891065_1891338_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76863.1|1891771_1893247_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76864.1|1893249_1895925_-	helicase	NA	A0A2H4J643	uncultured_Caudovirales_phage	26.0	1.1e-40
AUI76865.1|1895960_1898507_-	DNA methylase	NA	NA	NA	NA	NA
AUI76866.1|1898511_1902201_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76867.1|1902216_1902636_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76868.1|1902767_1903106_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76869.1|1903246_1903555_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76870.1|1903986_1904481_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76871.1|1904570_1905131_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76872.1|1905409_1906294_+	hypothetical protein	NA	NA	NA	NA	NA
AUI76873.1|1906459_1907017_+	resolvase	NA	A0A1J1J8Z4	Escherichia_phage	45.1	6.9e-33
AUI76874.1|1907210_1907912_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76875.1|1908090_1908933_-|transposase	transposase	transposase	Q6J1X2	Lactobacillus_phage	98.2	1.1e-154
AUI76876.1|1908986_1909238_-|transposase	transposase	transposase	Q6J1X3	Lactobacillus_phage	96.4	9.2e-38
AUI76877.1|1909698_1910505_+	peptide transporter	NA	A0A1V0DZZ0	Clostridioides_phage	30.1	2.3e-21
AUI76878.1|1910518_1910767_+	hypothetical protein	NA	NA	NA	NA	NA
AUI77164.1|1912443_1912743_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI76879.1|1913492_1914836_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76880.1|1914848_1915118_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76881.1|1916155_1916932_-	hydrolase	NA	A0A1V0DZX6	Clostridioides_phage	47.2	1.3e-18
AUI76882.1|1917149_1917512_-	ATPase	NA	NA	NA	NA	NA
AUI76883.1|1917848_1919411_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI76884.1|1919364_1920015_-|transposase	transposase	transposase	A0A7Q0	Microcystis_virus	45.2	5.2e-40
AUI76885.1|1920080_1920401_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76886.1|1920448_1920658_-	hypothetical protein	NA	NA	NA	NA	NA
AUI76887.1|1920752_1921937_-|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	59.1	3.1e-123
>prophage 19
CP015498	Lactobacillus helveticus strain FAM22155 chromosome, complete genome	2191149	2092653	2145640	2191149	transposase,protease	Gordonia_phage(10.0%)	41	NA	NA
AUI77029.1|2092653_2093511_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI77030.1|2093662_2094142_-	hypothetical protein	NA	NA	NA	NA	NA
AUI77031.1|2094239_2094602_-	hypothetical protein	NA	NA	NA	NA	NA
AUI77032.1|2094670_2095969_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.5	1.7e-18
AUI77033.1|2095972_2097262_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	36.3	5.8e-67
AUI77034.1|2097472_2098465_+	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	67.3	1.7e-130
AUI77035.1|2098903_2099959_-	cell surface protein	NA	NA	NA	NA	NA
AUI77036.1|2100147_2101326_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI77037.1|2101785_2102799_+	aspartate--ammonia ligase	NA	A0A1C9C5F0	Heterosigma_akashiwo_virus	41.4	8.0e-64
AUI77038.1|2103365_2104544_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI77039.1|2105025_2105316_-	hypothetical protein	NA	NA	NA	NA	NA
AUI77040.1|2105500_2106679_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI77041.1|2107428_2108820_-	amino acid permease	NA	NA	NA	NA	NA
AUI77042.1|2109870_2111244_-	amino acid permease	NA	NA	NA	NA	NA
AUI77043.1|2111289_2112642_-	amino acid permease	NA	NA	NA	NA	NA
AUI77044.1|2112732_2113497_-	hypothetical protein	NA	NA	NA	NA	NA
AUI77045.1|2113590_2114232_-	signal peptidase I	NA	NA	NA	NA	NA
AUI77046.1|2114338_2116462_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	40.2	3.8e-116
AUI77047.1|2116746_2117676_-	acyltransferase	NA	NA	NA	NA	NA
AUI77048.1|2117644_2118970_-	PTS cellobiose transporter subunit IIC	NA	NA	NA	NA	NA
AUI77174.1|2119058_2119760_+	macrolide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.7	9.6e-32
AUI77049.1|2121708_2122899_+|transposase	transposase	transposase	Q5ULQ4	Lactobacillus_virus	56.7	6.0e-119
AUI77050.1|2123440_2123695_+	hypothetical protein	NA	NA	NA	NA	NA
AUI77051.1|2123741_2123978_+	hypothetical protein	NA	NA	NA	NA	NA
AUI77052.1|2124016_2125537_-	sugar transporter	NA	NA	NA	NA	NA
AUI77053.1|2128301_2128709_-	hypothetical protein	NA	NA	NA	NA	NA
AUI77054.1|2129117_2129825_-	hypothetical protein	NA	NA	NA	NA	NA
AUI77055.1|2129873_2130074_-	transcriptional regulator	NA	NA	NA	NA	NA
AUI77056.1|2130407_2130755_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI77175.1|2130794_2131025_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI77057.1|2130999_2132337_+|transposase	transposase	transposase	S5VTD3	Leptospira_phage	34.4	7.4e-49
AUI77058.1|2132555_2133500_-	penicillin-binding protein	NA	NA	NA	NA	NA
AUI77059.1|2133499_2134786_-	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA	NA
AUI77060.1|2134778_2135018_-	D-alanine--poly(phosphoribitol) ligase subunit 2	NA	NA	NA	NA	NA
AUI77061.1|2135076_2136315_-	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	A0A125RNP0	Pseudomonas_phage	27.4	1.5e-24
AUI77062.1|2136314_2137829_-	D-alanine--poly(phosphoribitol) ligase subunit 1	NA	A0A2K9KZV5	Tupanvirus	28.4	4.4e-34
AUI77063.1|2137844_2137997_-	cytochrome C554	NA	NA	NA	NA	NA
AUI77064.1|2138218_2139397_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI77065.1|2139556_2139853_-	hypothetical protein	NA	NA	NA	NA	NA
AUI77066.1|2139872_2141009_-	hypothetical protein	NA	NA	NA	NA	NA
AUI77067.1|2144461_2145640_-|transposase	transposase	transposase	NA	NA	NA	NA
