The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP018889	Beggiatoa leptomitoformis strain D-401 chromosome, complete genome	4266286	122065	179030	4266286	transposase	Bacillus_virus(20.0%)	40	NA	NA
AUI67321.1|122065_122431_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI70471.1|122456_122888_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI67322.1|123094_123697_+	hypothetical protein	NA	NA	NA	NA	NA
AUI67323.1|123665_124058_-|transposase	IS1 transposase	transposase	NA	NA	NA	NA
AUI67324.1|124069_124369_-	hypothetical protein	NA	NA	NA	NA	NA
AUI67325.1|124684_127105_-	DNA gyrase subunit B	NA	G3M9Z3	Bacillus_virus	59.0	2.9e-11
AUI67326.1|127575_128748_-	hypothetical protein	NA	NA	NA	NA	NA
AUI67327.1|128832_130755_-	hypothetical protein	NA	NA	NA	NA	NA
AUI67328.1|130768_131506_-	ABC transporter permease	NA	NA	NA	NA	NA
AUI70472.1|131515_132463_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.1	1.4e-22
AUI67329.1|132765_133326_+	hypothetical protein	NA	NA	NA	NA	NA
AUI67330.1|133522_135562_-	oligopeptidase A	NA	A0A1V0SD92	Indivirus	22.5	2.3e-41
AUI67331.1|135839_136787_-	glycosyltransferase	NA	U5P087	Shigella_phage	32.4	6.6e-36
AUI67332.1|137176_138064_+	EamA family transporter	NA	NA	NA	NA	NA
AUI67333.1|138236_138515_-	hypothetical protein	NA	NA	NA	NA	NA
AUI67334.1|138514_140086_-	hypothetical protein	NA	NA	NA	NA	NA
AUI67335.1|140202_141111_-	CbbX protein	NA	G3MAX6	Bacillus_virus	38.3	2.4e-43
AUI67336.1|141235_141625_-	tautomerase family protein	NA	NA	NA	NA	NA
AUI67337.1|142090_145807_+	hypothetical protein	NA	A0A1V0SGX0	Hokovirus	37.9	1.7e-58
AUI67338.1|145878_146406_-	DUF3782 domain-containing protein	NA	NA	NA	NA	NA
AUI67339.1|146904_151707_+	hypothetical protein	NA	NA	NA	NA	NA
AUI67340.1|151693_153130_+	hypothetical protein	NA	NA	NA	NA	NA
AUI67341.1|153574_153778_-	hypothetical protein	NA	NA	NA	NA	NA
AUI70473.1|154203_158106_-	acriflavin resistance protein	NA	S5VTK5	Leptospira_phage	20.6	2.1e-27
AUI67342.1|158353_159451_-	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AUI67343.1|159633_160035_-	SCP-2 sterol transfer family protein	NA	NA	NA	NA	NA
AUI67344.1|160765_162559_+	hypothetical protein	NA	NA	NA	NA	NA
AUI67345.1|162781_163633_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
AUI67346.1|163691_164615_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AUI67347.1|164779_165889_+	hybrid sensor histidine kinase/response regulator	NA	W8CYM9	Bacillus_phage	35.5	1.5e-15
AUI67348.1|165930_169131_+	hypothetical protein	NA	A0A1V0SGX0	Hokovirus	34.2	8.8e-48
AUI67349.1|169163_170408_-	DNA repair exonuclease	NA	NA	NA	NA	NA
AUI67350.1|170914_173719_+	hypothetical protein	NA	NA	NA	NA	NA
AUI67351.1|174324_174891_+	type II secretion system protein GspH	NA	NA	NA	NA	NA
AUI67352.1|174880_175306_+	type II secretion system protein GspI	NA	NA	NA	NA	NA
AUI70474.1|175298_175910_+	hypothetical protein	NA	NA	NA	NA	NA
AUI67353.1|175902_177327_+	hypothetical protein	NA	NA	NA	NA	NA
AUI67354.1|177891_178257_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI70475.1|178282_178714_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI67355.1|178733_179030_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	47.5	6.4e-22
>prophage 2
CP018889	Beggiatoa leptomitoformis strain D-401 chromosome, complete genome	4266286	1463333	1505152	4266286	protease,transposase	Bacillus_virus(16.67%)	36	NA	NA
AUI68317.1|1463333_1464362_-|protease	membrane protease subunit, stomatin/prohibitin	protease	NA	NA	NA	NA
AUI68318.1|1464588_1466295_+	hypothetical protein	NA	NA	NA	NA	NA
AUI68319.1|1466681_1467188_+	hypothetical protein	NA	NA	NA	NA	NA
AUI68320.1|1467170_1467602_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI68321.1|1467608_1467959_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI68322.1|1468207_1469077_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
AUI68323.1|1469082_1469982_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA	NA
AUI68324.1|1469978_1471136_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.3	9.6e-29
AUI68325.1|1471570_1473676_+	hypothetical protein	NA	A0A127AWB9	Bacillus_phage	34.5	2.4e-14
AUI70545.1|1473744_1474689_-	magnesium chelatase	NA	NA	NA	NA	NA
AUI68326.1|1475109_1475970_+	hypothetical protein	NA	NA	NA	NA	NA
AUI68327.1|1476118_1477006_-	hypothetical protein	NA	A0A1X9SGU1	Bradyrhizobium_phage	35.1	4.3e-37
AUI68328.1|1477252_1479163_+	propionyl-CoA synthetase	NA	A0A2H4PQU7	Staphylococcus_phage	31.5	4.0e-64
AUI68329.1|1479300_1480185_+	methylisocitrate lyase	NA	NA	NA	NA	NA
AUI68330.1|1480186_1481320_+	2-methylcitrate synthase	NA	NA	NA	NA	NA
AUI68331.1|1481866_1482253_-	twitching motility protein PilT	NA	NA	NA	NA	NA
AUI70546.1|1482252_1482435_-	hypothetical protein	NA	NA	NA	NA	NA
AUI68332.1|1482943_1483186_-	hypothetical protein	NA	NA	NA	NA	NA
AUI68333.1|1483206_1485693_-	hypothetical protein	NA	A0A1L2BY82	Clostridium_phage	25.4	1.3e-59
AUI68334.1|1486017_1486239_-	hypothetical protein	NA	NA	NA	NA	NA
AUI68335.1|1486291_1487161_-|transposase	IS982 family transposase	transposase	NA	NA	NA	NA
AUI68336.1|1487407_1488586_-	putative methylaconitate Delta-isomerase PrpF	NA	NA	NA	NA	NA
AUI68337.1|1488701_1491308_-	Fe/S-dependent 2-methylisocitrate dehydratase AcnD	NA	NA	NA	NA	NA
AUI68338.1|1491309_1492002_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AUI68339.1|1492487_1493267_+	hypothetical protein	NA	NA	NA	NA	NA
AUI68340.1|1493825_1494173_+	addiction module toxin RelE	NA	NA	NA	NA	NA
AUI68341.1|1494165_1494456_+	transcriptional regulator	NA	NA	NA	NA	NA
AUI70547.1|1494734_1494812_+	hypothetical protein	NA	NA	NA	NA	NA
AUI68342.1|1495955_1497278_-	HslU--HslV peptidase ATPase subunit	NA	A0A191ZC11	Erwinia_phage	28.8	1.3e-42
AUI68343.1|1497376_1498360_-	hypothetical protein	NA	NA	NA	NA	NA
AUI68344.1|1498605_1500159_+	acyl CoA:acetate/3-ketoacid CoA transferase	NA	NA	NA	NA	NA
AUI68345.1|1500316_1501486_+	cation transporter	NA	NA	NA	NA	NA
AUI68346.1|1501783_1503193_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AUI68347.1|1503376_1503991_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AUI70548.1|1504329_1504761_-|transposase	transposase	transposase	NA	NA	NA	NA
AUI68348.1|1504786_1505152_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 3
CP018889	Beggiatoa leptomitoformis strain D-401 chromosome, complete genome	4266286	1903400	1940700	4266286	transposase	Morganella_phage(63.64%)	35	NA	NA
AUI68648.1|1903400_1903607_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	50.0	4.9e-13
AUI68649.1|1903846_1904050_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	63.1	4.3e-17
AUI68650.1|1904076_1904280_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	66.2	9.5e-17
AUI68651.1|1904304_1904508_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	64.6	3.6e-16
AUI68652.1|1904532_1904736_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	64.6	3.6e-16
AUI68653.1|1904760_1904964_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	64.6	3.6e-16
AUI68654.1|1904988_1905192_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	63.1	4.0e-15
AUI68655.1|1905506_1911236_+	hypothetical protein	NA	A0A2H4UZL5	Operophtera_brumata_nucleopolyhedrovirus	30.7	6.4e-09
AUI68656.1|1911319_1911619_+	hypothetical protein	NA	NA	NA	NA	NA
AUI68657.1|1911630_1912023_+|transposase	IS1 transposase	transposase	NA	NA	NA	NA
AUI68658.1|1913927_1914980_+	fructose-bisphosphate aldolase	NA	NA	NA	NA	NA
AUI68659.1|1915081_1915330_-	hypothetical protein	NA	NA	NA	NA	NA
AUI68660.1|1915860_1916676_-	serine O-acetyltransferase	NA	NA	NA	NA	NA
AUI70572.1|1917037_1917736_-	hypothetical protein	NA	NA	NA	NA	NA
AUI68661.1|1918094_1918652_-	hypothetical protein	NA	NA	NA	NA	NA
AUI68662.1|1918883_1920914_-	cation/H(+) antiporter	NA	NA	NA	NA	NA
AUI68663.1|1921185_1922328_+	hypothetical protein	NA	NA	NA	NA	NA
AUI68664.1|1922445_1925892_-	pyridine nucleotide-disulfide oxidoreductase	NA	NA	NA	NA	NA
AUI68665.1|1926126_1927113_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUI68666.1|1927179_1928889_+	hypothetical protein	NA	NA	NA	NA	NA
AUI68667.1|1928971_1930894_-	hypothetical protein	NA	G3MA91	Bacillus_virus	41.4	1.5e-31
AUI68668.1|1931082_1933266_+	hypothetical protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	29.9	5.2e-36
AUI68669.1|1933246_1933429_-	hypothetical protein	NA	NA	NA	NA	NA
AUI68670.1|1933644_1933944_+	hypothetical protein	NA	NA	NA	NA	NA
AUI68671.1|1933955_1934348_+|transposase	IS1 transposase	transposase	NA	NA	NA	NA
AUI68672.1|1934370_1934763_-|transposase	IS1 transposase	transposase	NA	NA	NA	NA
AUI68673.1|1934843_1935209_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI70573.1|1935234_1935666_+|transposase	transposase	transposase	NA	NA	NA	NA
AUI68674.1|1935685_1935952_-	hypothetical protein	NA	NA	NA	NA	NA
AUI68675.1|1936030_1936255_+	hypothetical protein	NA	NA	NA	NA	NA
AUI68676.1|1936300_1936924_+	hypothetical protein	NA	NA	NA	NA	NA
AUI68677.1|1937253_1937715_+	hypothetical protein	NA	NA	NA	NA	NA
AUI68678.1|1938781_1939288_+	hypothetical protein	NA	NA	NA	NA	NA
AUI68679.1|1939769_1940183_-	hypothetical protein	NA	NA	NA	NA	NA
AUI68680.1|1940358_1940700_+|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	47.1	2.0e-22
>prophage 4
CP018889	Beggiatoa leptomitoformis strain D-401 chromosome, complete genome	4266286	3545988	3553493	4266286		Salmonella_phage(16.67%)	7	NA	NA
AUI69923.1|3545988_3546948_+	glycosyltransferase	NA	A0A2H5BFL1	Salmonella_phage	27.9	3.2e-30
AUI69924.1|3546950_3548804_+	asparagine synthase (glutamine-hydrolyzing)	NA	A0A1V0SGM7	Hokovirus	29.0	1.2e-33
AUI69925.1|3548809_3549940_+	hypothetical protein	NA	NA	NA	NA	NA
AUI69926.1|3549936_3550551_-	hypothetical protein	NA	K4FBH6	Cronobacter_phage	33.8	7.4e-12
AUI69927.1|3550722_3552201_+	polynucleotide adenylyltransferase	NA	H7BUW3	unidentified_phage	39.4	5.0e-30
AUI69928.1|3552210_3552699_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	S4W084	Pandoravirus	36.6	2.4e-13
AUI69929.1|3552698_3553493_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	34.3	3.8e-37
