The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
AP017372	Halorhodospira halochloris DNA, nearly complete genome, strain: DSM 1059	2834560	688627	714350	2834560	transposase,integrase,holin,protease	Burkholderia_virus(33.33%)	26	688662:688721	697028:698358
BBE11006.1|688627_689884_-|transposase	ISL3 family transposase ISMac21	transposase	Q6V7R1	Burkholderia_virus	24.4	5.4e-17
688662:688721	attL	GGTGAGGCAGGCAGATGGGTGAGCTTGCCAGCGATCAGGTAGCAGATGGAGATCAGATTC	NA	NA	NA	NA
BAU57350.1|690060_690690_-	mobile element protein	NA	A0A077SLN2	Escherichia_phage	58.0	8.2e-51
BAU57351.2|690739_691231_-|transposase	transposase	transposase	A0A077SLN2	Escherichia_phage	66.2	2.0e-52
BAU57353.1|691408_691717_+|transposase	transposase	transposase	A0A1S5RHE3	Helicobacter_phage	47.1	5.5e-16
BAU57354.1|691857_693564_+	hypothetical protein	NA	NA	NA	NA	NA
BAU57355.1|693626_693860_+	diguanylate cyclase/phosphodiesterase with PAS/PAC sensor	NA	NA	NA	NA	NA
BAU57356.1|693856_694351_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA	NA
BBE11007.1|694646_694805_-	hypothetical protein	NA	NA	NA	NA	NA
BBE11008.1|695236_695458_-	hypothetical protein	NA	NA	NA	NA	NA
BAU57358.1|695870_696221_-	hypothetical protein	NA	NA	NA	NA	NA
BAU57359.1|696283_697027_+|integrase	integrase	integrase	NA	NA	NA	NA
BAU57360.1|696993_698250_-	mobile element protein	NA	Q6V7R1	Burkholderia_virus	24.4	5.4e-17
BBE11009.1|699133_699796_-	hypothetical protein	NA	NA	NA	NA	NA
697028:698358	attR	GGTGAGGCAGGCAGATGGGTGAGCTTGCCAGCGATCAGGTAGCAGATGGAGATCAGATTCTTCGTGGTGCGAAATCCTCGTGCACGGCCCTTGGCAACTTGAATCTGACCGTTCATGCTTTCGACGGGGCCGTTTGATAAGCGAGAGTCAAAGGCGTTGAGGATGCCCTGCCAGTGAGCCTTGAGCGTTAACGCTAGGCGCTTGAACGGCTCCAGCCGGCAGCGCCGAGCCCAACTGTACCAGGCGTTGAGGTTTTGCTCAGCCTCTCTGCGAGCACCACTGCCGGTCAGTATTTCGCGCAGTGCCTCCTTGAGCCGCCAGGCGCGGGCTGTTTTCAGCCTCGTCCGTGACAGGTAATGCAGTTCGGTGAGCTGCTTGAGCGTGTGCCGCGAGGCATCCTTAAGCCAGACCCAGCGAGTGCGCTTGAGCGCAGGCTCCAGGCGCACCTCGGCGCGGCGGACCTCGTCGACTGCCTGATTAGCCAGCTGCACCACATGGAAGGCGTCGAAGGTAATCGCTGCCTCGGGTAGATACCGCTGCACGCCGGCGATGTAGGCCTTGCTCATATCGATGCATACCGCCTCGACAGAGTCCCTATCGCCGCCGTGATCGTGTAGATCCGCCACAAACGCCCCAATGGTCGACTGGTTCCGCCCTTCGCAGGCAAAGAGTAGGCGTCGGTCATCAAGGTCCTGGAAGACAGTGATATAGTTATGCCCGCGCCGCGAGGCCGTCTCGTCGATGCCGACAGCGCGAACGTTGCTGAAGTCCTCCTGAGCACGGGCTGCTTCCACGTAGTGGTTGAGGATTCGCCAAATTGGGTCATCACCAACACCCAGGTAGTTAGCGACCTTCTGGACCGACATCTGCTGGCAGAGGGTAATGACCATCGCCTCGAACAACTGCGAGAACCCGCTGCCTGGACGCGCCCAAGGCACCTCGACCTGAGTGGTCTTCCCGCAGTCCTGACATCGCACCCTGGGCACGGCGGCATGGATATAGGCCTGGTGCTCGAAGAAATGCAGGTGCTGCCAGGAACGCTGACGGGTGTCATGAACTGCTTGAGCCTCGGCGCCACAGGCCGGGCAGGCGAAGCGGCTGCCGCTGGTGAAGGTGATATCGAAGTCGATGCGCTTGGCCTGCGCATCAAAGCGGATGTCACTGACTTTCCAGGGTGCACTCAACCCAAGCGCGGCGGTGAACAGGGCGTGCTCAGTAGCCATGGCAACTCCTCGCAAAAATGGTGTGGCGAGGCACAACATATAGGATCACACCCAGCGTTGACTACCTCGTCTTAAGCTGCTGTCACCCACACAATTCGCGAAGGGACC	NA	NA	NA	NA
BBE11010.1|700063_700357_+	hypothetical protein	NA	NA	NA	NA	NA
BBE11011.1|700353_700542_-	hypothetical protein	NA	NA	NA	NA	NA
BAU57362.1|701802_702306_-	MSHA pilin protein MshA	NA	NA	NA	NA	NA
BAU57363.1|702457_703687_-	MSHA biogenesis protein MshG	NA	NA	NA	NA	NA
BAU57364.1|703679_705656_-	MSHA biogenesis protein MshE	NA	NA	NA	NA	NA
BAU57365.1|705660_706392_-	MSHA biogenesis protein MshN	NA	NA	NA	NA	NA
BAU57366.2|706391_707894_-	MSHA biogenesis protein MshL	NA	NA	NA	NA	NA
BAU57367.1|708055_708265_-	hypothetical protein	NA	NA	NA	NA	NA
BAU57368.1|708491_709169_-	MSHA biogenesis protein MshJ	NA	NA	NA	NA	NA
BAU57369.1|709173_710742_-	MSHA biogenesis protein MshI	NA	NA	NA	NA	NA
BAU57370.2|710931_712158_-	hypothetical protein	NA	NA	NA	NA	NA
BAU57371.1|712243_712651_-|protease	putative activity regulator of membrane protease YbbK	protease	NA	NA	NA	NA
BAU57372.1|712685_714350_-|holin	high-affinity choline uptake protein BetT	holin	A0A2I7QNT1	Vibrio_phage	24.7	4.6e-24
>prophage 2
AP017372	Halorhodospira halochloris DNA, nearly complete genome, strain: DSM 1059	2834560	1579081	1589746	2834560	integrase,tRNA	Klosneuvirus(33.33%)	8	1574902:1574914	1585029:1585041
1574902:1574914	attL	CCTGCTCGAGCGC	NA	NA	NA	NA
BAU58147.1|1579081_1580059_+|integrase	putative integrase	integrase	E5E3N4	Burkholderia_phage	36.7	1.7e-23
BAU58148.1|1580415_1580646_-	carbon storage regulator	NA	A0A2I7RT00	Vibrio_phage	60.8	6.1e-12
BAU58149.1|1580737_1581976_-	aspartokinase	NA	NA	NA	NA	NA
BAU58150.1|1582087_1584691_-|tRNA	alanyl-tRNA synthetase	tRNA	A0A1V0SK38	Klosneuvirus	37.3	2.8e-76
BAU58151.1|1584705_1585185_-	regulatory protein RecX	NA	NA	NA	NA	NA
1585029:1585041	attR	CCTGCTCGAGCGC	NA	NA	NA	NA
BAU58152.1|1585189_1586359_-	RecA protein	NA	A0A2D1GPX2	Mycobacterium_phage	63.7	9.4e-117
BAU58153.1|1586542_1587028_-	molybdopterin binding motif	NA	B5TK85	Pseudomonas_phage	43.4	2.4e-26
BAU58154.1|1587109_1589746_+	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	22.8	1.8e-30
>prophage 3
AP017372	Halorhodospira halochloris DNA, nearly complete genome, strain: DSM 1059	2834560	1627203	1637991	2834560	tRNA	uncultured_Mediterranean_phage(57.14%)	9	NA	NA
BAU58190.1|1627203_1628184_-	cysteine synthase	NA	A0A1X9I5K7	Streptococcus_phage	34.6	1.3e-42
BAU58191.1|1628276_1629233_-	protein-export membrane protein SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	42.8	9.9e-48
BAU58192.1|1629235_1631113_-	protein-export membrane protein SecD	NA	NA	NA	NA	NA
BAU58193.1|1631116_1631461_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	39.8	1.3e-10
BAU58194.1|1631515_1631893_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	42.0	3.6e-09
BAU58195.1|1631971_1632997_-|tRNA	tRNA-guanine transglycosylase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	47.9	2.3e-82
BAU58196.1|1633135_1633741_-	carbonic anhydrase	NA	NA	NA	NA	NA
BAU58197.1|1633925_1635614_+	diguanylate cyclase/phosphodiesterase with PAS/PAC sensor	NA	A0A127AWB9	Bacillus_phage	33.7	9.7e-14
BAU58198.1|1635651_1637991_+	sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	28.1	6.9e-34
