assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_002217795.2_ASM221779v2	AP018823	Aquitalea magnusonii H3 DNA, complete genome	1	402606-405094	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	cas3,csa3,DEDDh,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	Type I-F	TTTCTGAGCTGCCTATCCGGCAGTGAAC,TTTCTGAGCTGCCTATCCGGCAGTGAAC,TTTCTGAGCTGCCTATCCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	41,41,31	41	TypeI-F	cas3,csa3,DEDDh,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	NA|56aa|up_8|AP018823.1_394911_395079_-,NA|40aa|down_4|AP018823.1_409199_409319_+,NA|38aa|down_9|AP018823.1_422474_422588_-	NA|340aa|up_9|AP018823.1_393375_394395_-	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane	NA|56aa|up_8|AP018823.1_394911_395079_-	NA	NA|223aa|up_7|AP018823.1_395466_396135_+	PRK08319, PRK08319, energy-coupling factor ABC transporter permease	NA|97aa|up_6|AP018823.1_396135_396426_+	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein	NA|227aa|up_5|AP018823.1_396463_397144_+	pfam02361, CbiQ, Cobalt transport protein	NA|287aa|up_4|AP018823.1_397140_398001_+	PRK13639, cbiO, cobalt transporter ATP-binding subunit; Provisional	NA|758aa|up_3|AP018823.1_398070_400344_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|234aa|up_2|AP018823.1_400558_401260_+	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal	NA|247aa|up_1|AP018823.1_401289_402030_+	COG0811, TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion]	NA|139aa|up_0|AP018823.1_402033_402450_+	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion]	cas6f|195aa|down_0|AP018823.1_405254_405839_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|341aa|down_1|AP018823.1_405838_406861_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|330aa|down_2|AP018823.1_406857_407847_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|446aa|down_3|AP018823.1_407843_409181_-	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	NA|40aa|down_4|AP018823.1_409199_409319_+	NA	cas3f|1115aa|down_5|AP018823.1_409353_412698_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|326aa|down_6|AP018823.1_412694_413672_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|899aa|down_7|AP018823.1_414606_417303_+	pfam07693, KAP_NTPase, KAP family P-loop domain	NA|900aa|down_8|AP018823.1_417302_420002_+	cd00443, ADA_AMPD, Adenosine/AMP deaminase	NA|38aa|down_9|AP018823.1_422474_422588_-	NA
GCA_002217795.2_ASM221779v2	AP018823	Aquitalea magnusonii H3 DNA, complete genome	2	1981799-1981927	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	Orphan	GCGACGGTGTCCAGCCCGCAGGGCGTGCGAAGCTTGCCA	39	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	NA,NA|131aa|down_0|AP018823.1_1982106_1982499_+,NA|91aa|down_1|AP018823.1_1982566_1982839_+,NA|1257aa|down_3|AP018823.1_1984202_1987973_-,NA|412aa|down_5|AP018823.1_1990489_1991725_-,NA|322aa|down_8|AP018823.1_1999268_2000234_+,NA|38aa|down_9|AP018823.1_2001146_2001260_-	NA|299aa|up_9|AP018823.1_1967483_1968380_+	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|402aa|up_8|AP018823.1_1968376_1969582_+	pfam07690, MFS_1, Major Facilitator Superfamily	NA|301aa|up_7|AP018823.1_1969615_1970518_+	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator	NA|145aa|up_6|AP018823.1_1970598_1971033_+	PRK05578, PRK05578, cytidine deaminase; Validated	NA|1340aa|up_5|AP018823.1_1971225_1975245_-	PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional	NA|113aa|up_4|AP018823.1_1975332_1975671_+	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|253aa|up_3|AP018823.1_1975758_1976517_-	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|338aa|up_2|AP018823.1_1976638_1977652_+	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA|250aa|up_1|AP018823.1_1977644_1978394_+	PRK10723, PRK10723, polyphenol oxidase	NA|958aa|up_0|AP018823.1_1978867_1981741_+	PRK07207, PRK07207, ribonucleoside-diphosphate reductase subunit alpha	NA|131aa|down_0|AP018823.1_1982106_1982499_+	NA	NA|91aa|down_1|AP018823.1_1982566_1982839_+	NA	NA|361aa|down_2|AP018823.1_1982857_1983940_+	PRK07209, PRK07209, ribonucleotide-diphosphate reductase subunit beta; Validated	NA|1257aa|down_3|AP018823.1_1984202_1987973_-	NA	NA|590aa|down_4|AP018823.1_1988723_1990493_-	COG0433, COG0433,  HerA helicase [Replication, recombination, and repair]	NA|412aa|down_5|AP018823.1_1990489_1991725_-	NA	NA|654aa|down_6|AP018823.1_1994014_1995976_+	pfam00665, rve, Integrase core domain	NA|645aa|down_7|AP018823.1_1996898_1998833_+	pfam06527, TniQ, TniQ	NA|322aa|down_8|AP018823.1_1999268_2000234_+	NA	NA|38aa|down_9|AP018823.1_2001146_2001260_-	NA
GCA_002217795.2_ASM221779v2	AP018823	Aquitalea magnusonii H3 DNA, complete genome	3	2532510-2535039	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,csa3,DEDDh,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	Type I-E	CGGTTCATCCCCGCGGGCGCGGGGAACAG,CGGTTCATCCCCGCGGGCGCGGGGAACAG,CGGTTCATCCCCGCGGGCGCGGGGAACAG	29,29,29	1	1	2533271-2533302	AP018823.1_256326-256295	I-E:I-E:I-E	41,41,41	41	TypeI-E	cas3,csa3,DEDDh,cas6f,cas7f,cas5f,cas8f,cas3f,cas1,DinG,cas2,cas6e,cas5,cas7,cse2gr11,cas8e,WYL	NA|47aa|up_8|AP018823.1_2522188_2522329_+,NA|71aa|up_5|AP018823.1_2526133_2526346_+,NA	NA|507aa|up_9|AP018823.1_2520679_2522200_-	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like	NA|47aa|up_8|AP018823.1_2522188_2522329_+	NA	NA|865aa|up_7|AP018823.1_2522339_2524934_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|385aa|up_6|AP018823.1_2524936_2526091_-	COG3287, COG3287, Uncharacterized conserved protein [Function unknown]	NA|71aa|up_5|AP018823.1_2526133_2526346_+	NA	NA|225aa|up_4|AP018823.1_2526342_2527017_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|543aa|up_3|AP018823.1_2527053_2528682_-	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|433aa|up_2|AP018823.1_2529323_2530622_-	PRK15075, PRK15075, tricarballylate/proton symporter TcuC	NA|263aa|up_1|AP018823.1_2530635_2531424_-	pfam13531, SBP_bac_11, Bacterial extracellular solute-binding protein	NA|306aa|up_0|AP018823.1_2531514_2532432_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	cas2|99aa|down_0|AP018823.1_2535145_2535442_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|AP018823.1_2535422_2536343_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|205aa|down_2|AP018823.1_2536335_2536950_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|220aa|down_3|AP018823.1_2536924_2537584_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|379aa|down_4|AP018823.1_2537585_2538722_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|174aa|down_5|AP018823.1_2538769_2539291_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|520aa|down_6|AP018823.1_2539283_2540843_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|862aa|down_7|AP018823.1_2541058_2543644_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|540aa|down_8|AP018823.1_2544238_2545858_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|118aa|down_9|AP018823.1_2546235_2546589_-	cd04765, HTH_MlrA-like_sg2, Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators
