The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP022046	Staphylococcus sciuri strain FDAARGOS_285 chromosome, complete genome	2764040	816459	828130	2764040		Staphylococcus_phage(100.0%)	11	NA	NA
ASE33804.1|816459_817869_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	51.9	1.5e-132
ASE33805.1|817855_818854_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	38.2	3.0e-63
ASE33806.1|818900_819125_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	67.1	1.8e-24
ASE33807.1|819135_819921_-	hypothetical protein	NA	NA	NA	NA	NA
ASE33808.1|819987_820452_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	54.5	8.2e-40
ASE35604.1|820459_821212_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	57.1	3.6e-77
ASE33809.1|821233_822835_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	68.8	1.8e-219
ASE33810.1|823232_824426_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	79.6	5.0e-182
ASE33811.1|824906_825818_+	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	55.0	3.9e-70
ASE33812.1|825876_827259_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
ASE33813.1|827287_828130_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	64.3	7.0e-106
>prophage 2
CP022046	Staphylococcus sciuri strain FDAARGOS_285 chromosome, complete genome	2764040	843719	851563	2764040		Staphylococcus_phage(85.71%)	7	NA	NA
ASE33833.1|843719_844874_-	CBS domain-containing protein	NA	Q6GZ03	Mycoplasma_phage	49.5	2.6e-18
ASE33834.1|845126_846641_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	42.9	9.3e-08
ASE33835.1|847159_848206_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	48.0	1.2e-91
ASE33836.1|848210_848843_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	51.0	1.0e-53
ASE33837.1|848854_850027_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	62.1	3.0e-139
ASE33838.1|850047_850518_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	81.0	2.2e-56
ASE33839.1|850558_851563_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	57.5	1.9e-105
>prophage 3
CP022046	Staphylococcus sciuri strain FDAARGOS_285 chromosome, complete genome	2764040	855336	862566	2764040	tRNA	Staphylococcus_phage(100.0%)	6	NA	NA
ASE33845.1|855336_855894_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	56.8	3.5e-53
ASE33846.1|855890_856850_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	80.0	3.8e-63
ASE33847.1|856969_858145_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	57.1	9.5e-125
ASE33848.1|858436_860821_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	79.0	0.0e+00
ASE33849.1|860842_861154_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	62.1	2.3e-30
ASE33850.1|861306_862566_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	61.9	1.1e-30
>prophage 4
CP022046	Staphylococcus sciuri strain FDAARGOS_285 chromosome, complete genome	2764040	991172	1000174	2764040	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
ASE33963.1|991172_992168_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.9	2.6e-06
ASE33964.1|992184_993210_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
ASE33965.1|993225_994365_+|tRNA	tRNA-guanine(34) transglycosylase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.1	5.4e-85
ASE33966.1|994377_994641_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.9	9.8e-06
ASE33967.1|994810_997102_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	33.6	4.5e-30
ASE33968.1|997361_999656_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	30.5	4.9e-69
ASE33969.1|999655_1000174_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	47.9	3.3e-29
>prophage 5
CP022046	Staphylococcus sciuri strain FDAARGOS_285 chromosome, complete genome	2764040	1631418	1639889	2764040		Synechococcus_phage(33.33%)	9	NA	NA
ASE34555.1|1631418_1631985_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.6	1.0e-28
ASE34556.1|1631981_1633016_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.0	7.2e-68
ASE34557.1|1632999_1634496_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.5	4.0e-43
ASE34558.1|1634474_1636664_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.0	4.6e-141
ASE34559.1|1636656_1637328_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
ASE34560.1|1637327_1637588_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
ASE34561.1|1637589_1638291_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	38.6	1.7e-41
ASE34562.1|1638292_1639420_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
ASE34563.1|1639406_1639889_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.0	8.9e-21
>prophage 6
CP022046	Staphylococcus sciuri strain FDAARGOS_285 chromosome, complete genome	2764040	1831778	1839112	2764040	bacteriocin	Staphylococcus_phage(50.0%)	9	NA	NA
ASE34736.1|1831778_1832411_-|bacteriocin	bacteriocin ABC transporter ATP-binding protein	bacteriocin	G9BWD6	Planktothrix_phage	37.3	2.1e-22
ASE34737.1|1832407_1832770_-	hypothetical protein	NA	NA	NA	NA	NA
ASE34738.1|1832769_1834773_-	hypothetical protein	NA	NA	NA	NA	NA
ASE34739.1|1834798_1835092_-|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
ASE34740.1|1835346_1836600_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1X9I9G7	Staphylococcus_phage	74.1	9.6e-75
ASE34741.1|1836620_1836941_-	PTS mannose transporter subunit IID	NA	Q4ZD59	Staphylococcus_phage	66.2	5.5e-27
ASE34742.1|1837083_1837413_+	XRE family transcriptional regulator	NA	H9A0K4	Staphylococcus_phage	38.6	4.1e-09
ASE34743.1|1837444_1837909_+	toxin	NA	A1BTY5	Staphylococcus_virus	51.6	9.1e-39
ASE34744.1|1837963_1839112_-	galactonate dehydratase	NA	Q6A202	Oenococcus_phage	36.5	4.5e-63
>prophage 7
CP022046	Staphylococcus sciuri strain FDAARGOS_285 chromosome, complete genome	2764040	1955612	1968155	2764040		uncultured_Caudovirales_phage(50.0%)	11	NA	NA
ASE34866.1|1955612_1956584_-	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	66.6	2.8e-114
ASE34867.1|1956709_1957126_-	hypothetical protein	NA	NA	NA	NA	NA
ASE34868.1|1957275_1958247_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	85.4	2.6e-160
ASE34869.1|1958275_1960381_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	84.0	0.0e+00
ASE34870.1|1960343_1960742_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	58.3	3.0e-38
ASE34871.1|1961117_1962002_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
ASE34872.1|1962001_1962502_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	67.9	1.0e-48
ASE34873.1|1962796_1964311_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	34.9	1.2e-66
ASE34874.1|1964899_1966402_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	35.8	4.8e-65
ASE34875.1|1966441_1967023_-	5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
ASE34876.1|1967087_1968155_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	22.8	8.0e-14
>prophage 8
CP022046	Staphylococcus sciuri strain FDAARGOS_285 chromosome, complete genome	2764040	2465752	2476605	2764040	integrase	Staphylococcus_phage(45.45%)	16	2470472:2470487	2478691:2478706
ASE35347.1|2465752_2466097_-	hypothetical protein	NA	A0A1W6JQM3	Staphylococcus_phage	29.7	1.8e-07
ASE35348.1|2467446_2467869_-	hypothetical protein	NA	A0A1C8E9D1	Bacillus_phage	31.8	1.3e-07
ASE35349.1|2468066_2468273_-	hypothetical protein	NA	A0A2H4JAQ2	uncultured_Caudovirales_phage	42.9	9.0e-07
ASE35350.1|2468477_2469353_-	hypothetical protein	NA	A0A2I6PDV5	Staphylococcus_phage	38.9	8.8e-43
ASE35351.1|2469367_2470252_-	DnaD domain protein	NA	A0A2H4J8S8	uncultured_Caudovirales_phage	48.2	1.1e-43
ASE35352.1|2470311_2470686_-	hypothetical protein	NA	NA	NA	NA	NA
2470472:2470487	attL	TCTTCTTTAATAGATA	NA	NA	NA	NA
ASE35353.1|2470686_2471070_-	pathogenicity island protein	NA	A0A2H4JBF1	uncultured_Caudovirales_phage	43.5	3.6e-17
ASE35354.1|2471143_2471326_-	hypothetical protein	NA	NA	NA	NA	NA
ASE35355.1|2471342_2471609_-	pathogenicity island protein	NA	Q4ZE77	Staphylococcus_phage	51.2	2.3e-18
ASE35356.1|2471612_2472395_-	transcriptional regulator	NA	A1BTY9	Staphylococcus_virus	72.7	6.5e-106
ASE35357.1|2472411_2472624_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
ASE35358.1|2472814_2473735_+	XRE family transcriptional regulator	NA	Q9AZH9	Lactococcus_phage	33.0	1.8e-09
ASE35359.1|2473767_2474991_+|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	69.7	2.7e-154
ASE35360.1|2474987_2475674_+	hypothetical protein	NA	NA	NA	NA	NA
ASE35361.1|2475775_2476018_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
ASE35362.1|2476077_2476605_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	61.7	1.5e-50
2478691:2478706	attR	TCTTCTTTAATAGATA	NA	NA	NA	NA
