The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP015895	Lactococcus lactis subsp. lactis strain 184 chromosome, complete genome	2342519	35158	44129	2342519	terminase	Lactococcus_phage(93.75%)	18	NA	NA
ARD92431.1|35158_35482_-	prophage protein, regulator	NA	Q9AZI1	Lactococcus_phage	100.0	3.8e-52
ARD92432.1|35506_35917_-	prophage protein	NA	Q9AZI2	Lactococcus_phage	100.0	8.0e-71
ARD92433.1|35913_36357_-|terminase	Phage terminase small subunit	terminase	Q9AZI3	Lactococcus_phage	100.0	7.3e-62
ARD92434.1|36489_37071_-	prophage protein	NA	Q9AZI4	Lactococcus_phage	99.5	9.8e-99
ARD92435.1|37307_38240_-	Phage DNA polymerase (ATPase domain)	NA	Q9AZI5	Lactococcus_phage	93.2	6.5e-169
ARD92436.1|38260_38935_-	Phage DNA polymerase (ATPase domain)	NA	Q9AZI5	Lactococcus_phage	99.1	4.7e-121
ARD92437.1|38945_39740_-	prophage protein	NA	Q9AZI6	Lactococcus_phage	94.7	1.5e-150
ARD92438.1|39849_40179_-	prophage protein	NA	Q9AZI7	Lactococcus_phage	95.4	6.4e-55
ARD92439.1|40175_40430_-	prophage protein	NA	Q9AZE9	Lactococcus_phage	90.4	1.8e-36
ARD92440.1|40426_40666_-	prophage protein	NA	Q9AZF0	Lactococcus_phage	94.9	1.7e-36
ARD92441.1|40708_40987_-	prophage protein	NA	Q9AZJ1	Lactococcus_phage	74.2	1.5e-33
ARD92442.1|40983_41202_-	prophage protein	NA	NA	NA	NA	NA
ARD92443.1|41198_41720_-	prophage protein	NA	Q9AZJ3	Lactococcus_phage	81.5	1.4e-75
ARD92444.1|41723_41918_-	prophage protein	NA	Q9AZF2	Lactococcus_phage	96.9	8.7e-28
ARD92445.1|41988_42714_-	putative phage-encoded protein	NA	R9QNB1	Lactococcus_phage	61.9	4.0e-65
ARD92446.1|42885_43107_-	Prophage transcriptional regulator	NA	NA	NA	NA	NA
ARD92447.1|43277_43820_+	Prophage transcriptional regulator	NA	A0A0P0IV68	Lactobacillus_phage	50.8	3.3e-08
ARD92448.1|43934_44129_+	prophage protein	NA	Q9AZK1	Lactococcus_phage	95.3	4.3e-27
>prophage 2
CP015895	Lactococcus lactis subsp. lactis strain 184 chromosome, complete genome	2342519	156989	162604	2342519	transposase	Clostridium_phage(25.0%)	8	NA	NA
ARD92566.1|156989_157787_-	plasmid partition protein	NA	E2ELL2	Clostridium_phage	38.3	1.8e-18
ARD92567.1|157890_158175_-	invertase/resolvase/recombinase	NA	A0A1J1J8Z4	Escherichia_phage	44.6	2.2e-11
ARD92568.1|158320_159307_+	UDP-glucose 4-epimerase	NA	A0A2K9L5H6	Tupanvirus	36.0	3.4e-51
ARD92569.1|159453_159750_-	invertase/resolvase/recombinase	NA	A0A0A8WIK3	Clostridium_phage	42.7	1.3e-11
ARD92570.1|159956_160307_-	hypothetical protein	NA	A0A182BQ76	Lactococcus_phage	72.3	1.8e-10
ARD92571.1|160661_161144_-|transposase	transposase helper protein for IS712H	transposase	A0A059NT77	Lactococcus_phage	98.7	2.0e-81
ARD92572.1|161204_161885_+	Transposase	NA	A0A1X9I6C6	Streptococcus_phage	84.5	8.5e-110
ARD92573.1|162181_162604_-	cupin	NA	Q2I8C5	Bacillus_phage	61.0	3.1e-38
>prophage 3
CP015895	Lactococcus lactis subsp. lactis strain 184 chromosome, complete genome	2342519	191841	198379	2342519		Lactococcus_phage(57.14%)	8	NA	NA
ARD92603.1|191841_192522_-	Transposase	NA	A0A1X9I6C6	Streptococcus_phage	84.1	1.4e-109
ARD92604.1|192832_194950_-	Cation transport ATPase	NA	E4ZFI9	Streptococcus_phage	62.7	3.1e-235
ARD92605.1|194946_195306_-	transcriptional regulator ArsR family	NA	E4ZFI8	Streptococcus_phage	48.2	5.4e-23
ARD92606.1|195909_196110_-	cold-shock DNA-binding protein family	NA	Q9AZD3	Lactococcus_phage	97.0	9.6e-30
ARD92607.1|196386_196587_-	cold-shock DNA-binding protein family	NA	Q9AZD3	Lactococcus_phage	50.8	8.2e-13
ARD92608.1|197057_197426_+	hypothetical protein	NA	NA	NA	NA	NA
ARD92609.1|197455_198031_-	hypothetical protein	NA	Q9AZJ8	Lactococcus_phage	38.5	1.1e-25
ARD92610.1|198034_198379_-	HTH-type transcriptional regulator	NA	A0A182BQC8	Lactococcus_phage	43.8	3.7e-21
>prophage 4
CP015895	Lactococcus lactis subsp. lactis strain 184 chromosome, complete genome	2342519	347468	363059	2342519	head,transposase,integrase	Lactococcus_phage(94.44%)	23	347347:347371	366315:366339
347347:347371	attL	CAACAAAATGATGTAATTTCTTATT	NA	NA	NA	NA
ARD92765.1|347468_348665_-|integrase	Phage integrase	integrase	Q9AZI0	Lactococcus_phage	57.1	1.6e-127
ARD92766.1|348782_349274_-	Transcriptional regulator xre family	NA	NA	NA	NA	NA
ARD92767.1|349403_349613_+	prophage protein	NA	Q8LTL6	Lactococcus_phage	67.8	1.1e-15
ARD92768.1|349965_350160_+	prophage protein	NA	Q9AZF2	Lactococcus_phage	93.8	1.3e-26
ARD92769.1|350163_350682_+	prophage protein	NA	Q9AZJ3	Lactococcus_phage	69.5	5.2e-59
ARD92770.1|350678_350948_+	prophage protein	NA	Q9AZH3	Lactococcus_phage	68.5	6.2e-24
ARD92771.1|350957_351188_+	prophage protein	NA	Q9AZE9	Lactococcus_phage	68.9	1.1e-16
ARD92772.1|351228_351987_-|transposase	transposase helper protein for IS712H	transposase	A0A059NT77	Lactococcus_phage	100.0	5.3e-137
ARD92773.1|351998_353222_-|transposase	transposase for insertion sequence element IS712H	transposase	A0A059NT83	Lactococcus_phage	100.0	4.9e-233
ARD92774.1|353373_353568_+	prophage protein	NA	Q9AZE8	Lactococcus_phage	95.3	2.2e-26
ARD92775.1|353554_353881_+	prophage protein	NA	Q9AZE7	Lactococcus_phage	71.3	3.5e-37
ARD92776.1|353889_354468_+	prophage protein	NA	Q9AZE6	Lactococcus_phage	93.2	9.1e-89
ARD92777.1|354460_355903_+	prophage protein	NA	Q9AZE5	Lactococcus_phage	97.1	7.0e-271
ARD92778.1|356214_356625_+	prophage protein	NA	Q9AZI4	Lactococcus_phage	82.4	4.4e-53
ARD92779.1|356784_358026_+|head	major head protein precursor	head	E9LUQ3	Lactobacillus_phage	61.4	1.1e-139
ARD92780.1|358028_358649_+	prophage protein	NA	NA	NA	NA	NA
ARD92781.1|358737_359070_+	prophage protein	NA	Q9AZE0	Lactococcus_phage	86.1	1.9e-46
ARD92782.1|359174_359510_+	prophage protein	NA	Q9AZD9	Lactococcus_phage	74.3	5.4e-33
ARD92783.1|359506_360019_+	prophage protein	NA	Q8LTL4	Lactococcus_phage	96.5	4.4e-95
ARD92784.1|360460_360808_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
ARD92785.1|361770_362172_+	prophage protein	NA	NA	NA	NA	NA
ARD92786.1|362448_362721_-	prophage protein	NA	NA	NA	NA	NA
ARD92787.1|362879_363059_+	prophage protein	NA	Q9AZG2	Lactococcus_phage	98.3	6.0e-23
366315:366339	attR	CAACAAAATGATGTAATTTCTTATT	NA	NA	NA	NA
>prophage 5
CP015895	Lactococcus lactis subsp. lactis strain 184 chromosome, complete genome	2342519	477369	489500	2342519		Streptococcus_phage(40.0%)	14	NA	NA
ARD92898.1|477369_477687_+	Thiol-disulfide isomerase and thioredoxin	NA	A0A0K2FIM3	Achromobacter_phage	30.4	4.5e-05
ARD92899.1|477772_478399_+	EMAP domain	NA	NA	NA	NA	NA
ARD92900.1|478561_479902_+	NADH oxidase H2O-forming	NA	NA	NA	NA	NA
ARD92901.1|479991_480381_+	single-stranded DNA-binding protein	NA	A0A0K0MWE1	Streptococcus_phage	45.0	1.4e-24
ARD92902.1|480500_480785_+	Co-chaperonin GroES (HSP10)	NA	A0A221S386	uncultured_virus	44.1	3.1e-13
ARD92903.1|480872_482501_+	Chaperonin GroEL (HSP60 family)	NA	A0A219YK78	uncultured_virus	56.8	4.9e-156
ARD92904.1|482546_483359_-	Metal-dependent hydrolase of the beta-lactamase superfamily I	NA	A0A0C5AJ83	Bacteriophage	38.1	3.1e-34
ARD92905.1|483529_484972_-	PAS/PAC sensor signal transduction histidine kinase	NA	W8CYF6	Bacillus_phage	33.0	1.4e-32
ARD92906.1|484964_485666_-	DNA-binding response regulator OmpR family (Rec-wHTH domains)	NA	W8CYM9	Bacillus_phage	39.7	3.5e-42
ARD92907.1|485843_486479_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	65.0	5.4e-74
ARD92908.1|486611_487472_+	DNA polymerase III delta prime subunit	NA	M1NSC1	Streptococcus_phage	45.2	5.0e-67
ARD92909.1|487523_488306_+	Phosphorelay inhibitor	NA	NA	NA	NA	NA
ARD92910.1|488298_488625_+	Regulator of replication initiation timing	NA	NA	NA	NA	NA
ARD92911.1|488624_489500_+	methyltransferase	NA	M1PLC5	Streptococcus_phage	65.4	8.7e-99
>prophage 6
CP015895	Lactococcus lactis subsp. lactis strain 184 chromosome, complete genome	2342519	529227	567358	2342519	holin,portal,transposase,terminase,integrase,capsid	Lactococcus_phage(96.3%)	56	529138:529165	567853:567880
529138:529165	attL	CCCTCGGATCATGGTGCCAAACCTCGCC	NA	NA	NA	NA
ARD92945.1|529227_530361_-|integrase	Phage integrase	integrase	Q9AZR0	Lactococcus_phage	97.6	3.2e-210
ARD92946.1|530483_531062_-	prophage protein	NA	Q9AZQ9	Lactococcus_phage	99.5	3.7e-98
ARD92947.1|531145_531958_-	Transcriptional regulator xre family	NA	Q9AZQ8	Lactococcus_phage	97.8	9.0e-151
ARD92948.1|532201_532963_-	prophage protein	NA	NA	NA	NA	NA
ARD92949.1|533143_533386_+	prophage protein	NA	Q77JL3	Lactococcus_phage	100.0	5.2e-38
ARD92950.1|533399_534125_+	Phage anti-repressor protein	NA	A0A1P8BKW5	Lactococcus_phage	99.6	1.2e-133
ARD92951.1|534137_534470_+	prophage protein	NA	Q9AZQ3	Lactococcus_phage	97.2	3.8e-55
ARD92952.1|534607_534841_+	prophage protein	NA	A0A059NT46	Lactococcus_phage	100.0	1.8e-35
ARD92953.1|534795_535074_-	prophage protein	NA	A0A059NT68	Lactococcus_phage	98.9	3.2e-47
ARD92954.1|535176_535392_+	prophage protein	NA	Q38272	Lactococcus_phage	100.0	2.4e-34
ARD92955.1|535506_535896_+	prophage protein	NA	O48508	Lactococcus_phage	96.1	1.1e-66
ARD92956.1|535906_536644_+	phage nucleotide-binding protein	NA	Q38338	Lactococcus_phage	71.3	2.2e-95
ARD92957.1|536643_537147_+	prophage protein	NA	A0A059NT72	Lactococcus_phage	98.8	2.6e-92
ARD92958.1|537277_538117_+	prophage protein	NA	A0A059NT67	Lactococcus_phage	95.0	2.8e-123
ARD92959.1|538117_539014_+|transposase	transposase helper protein for IS712H	transposase	Q9AZP7	Lactococcus_phage	88.3	2.5e-141
ARD92960.1|539010_539175_+	prophage protein	NA	Q9AZP6	Lactococcus_phage	96.3	1.6e-22
ARD92961.1|539164_539584_+	prophage protein	NA	A0A059NT48	Lactococcus_phage	100.0	4.6e-74
ARD92962.1|539584_539824_+	prophage protein	NA	A0A059NT75	Lactococcus_phage	98.7	5.2e-38
ARD92963.1|539929_540454_+	prophage protein	NA	A0A059NT70	Lactococcus_phage	100.0	5.5e-93
ARD92964.1|540467_540674_+	prophage protein	NA	A0A1P8BL00	Lactococcus_phage	100.0	2.4e-31
ARD92965.1|540666_540939_+	prophage protein	NA	Q9AYV0	Lactococcus_phage	97.8	7.7e-46
ARD92966.1|540941_541511_+	prophage protein	NA	A0A1P8BMP8	Lactococcus_phage	74.6	6.7e-76
ARD92967.1|541507_541927_+	deoxyuridine 5-triphosphate nucleotidohydrolase	NA	A0A059NT49	Lactococcus_phage	97.1	8.1e-71
ARD92968.1|541929_542385_+	prophage protein	NA	R9QLL5	Lactococcus_phage	96.5	1.0e-34
ARD92969.1|542381_543062_+	prophage protein	NA	A0A1P8BK99	Lactococcus_phage	99.1	3.1e-128
ARD92970.1|543139_543283_+	prophage protein	NA	Q9AZN8	Lactococcus_phage	100.0	2.1e-18
ARD92971.1|543578_543782_+	prophage protein	NA	NA	NA	NA	NA
ARD92972.1|543789_543975_+	prophage protein	NA	R9QMC5	Lactococcus_phage	100.0	4.1e-27
ARD92973.1|543971_544127_+	prophage protein	NA	Q9AZT8	Lactococcus_phage	94.1	8.2e-21
ARD92974.1|544650_545073_+	prophage protein	NA	Q9AYX5	Lactococcus_phage	100.0	5.5e-75
ARD92975.1|545303_545720_+|terminase	Phage terminase small subunit	terminase	Q9AZ67	Lactococcus_phage	86.2	7.8e-58
ARD92976.1|545712_547101_+|terminase	Phage terminase large subunit	terminase	Q8LTR4	Lactococcus_phage	98.5	5.1e-271
ARD92977.1|547101_548463_+|portal	Phage portal protein	portal	A0A1P8BKU9	Lactococcus_phage	98.5	3.6e-253
ARD92978.1|548466_549507_+	Phage Mu protein F like protein	NA	A0A1P8BKT0	Lactococcus_phage	95.7	5.0e-186
ARD92979.1|549552_549885_+	prophage protein	NA	A0A1P8BMG7	Lactococcus_phage	98.2	1.8e-57
ARD92980.1|550007_550604_+	prophage protein	NA	A0A1P8BMF1	Lactococcus_phage	97.0	9.5e-65
ARD92981.1|550621_551485_+|capsid	capsid protein	capsid	A0A1P8BKP7	Lactococcus_phage	98.6	2.9e-155
ARD92982.1|551550_551742_+	prophage protein	NA	A0A1P8BKI7	Lactococcus_phage	96.8	3.4e-24
ARD92983.1|551755_552088_+	prophage protein	NA	A0A1L2JXP0	Streptococcus_phage	99.1	1.2e-53
ARD92984.1|552084_552396_+	prophage protein	NA	A0A1P8BM53	Lactococcus_phage	99.0	7.9e-55
ARD92985.1|552392_552719_+	prophage protein	NA	A0A1L2K205	Streptococcus_phage	97.2	1.6e-53
ARD92986.1|552715_553111_+	prophage protein	NA	A0A1P8BMG4	Lactococcus_phage	95.4	1.8e-64
ARD92987.1|553121_553619_+	prophage protein	NA	Q38612	Lactococcus_phage	98.8	1.8e-85
ARD92988.1|553734_554085_+	prophage protein	NA	A0A1P8BLS4	Lactococcus_phage	98.3	3.3e-57
ARD92989.1|554126_554438_+	prophage protein	NA	A0A1P8BLR3	Lactococcus_phage	100.0	1.0e-49
ARD92990.1|554453_557078_+	prophage TMP	NA	A0A1P8BM12	Lactococcus_phage	93.8	5.2e-256
ARD92991.1|557091_557853_+	prophage DIT	NA	Q9AYV7	Lactococcus_phage	96.0	4.1e-137
ARD92992.1|557852_560576_+	prophage TAL	NA	Q9AZ57	Lactococcus_phage	94.3	0.0e+00
ARD92993.1|560588_561569_+	prophage protein	NA	Q8LTP9	Lactococcus_phage	98.1	2.0e-181
ARD92994.1|561510_562335_+	prophage protein	NA	B5SP44	Lactococcus_phage	78.5	7.6e-121
ARD92995.1|562354_562837_+	prophage protein	NA	B5SP45	Lactococcus_phage	98.8	5.5e-87
ARD92996.1|562919_563144_+	prophage protein	NA	A0A1B1IMU8	Lactococcus_phage	100.0	6.1e-33
ARD92997.1|563156_565118_+	prophage protein	NA	A0A1B1IMZ1	Lactococcus_phage	84.4	4.4e-268
ARD92998.1|565142_565409_+|holin	prophage holin	holin	A0A1B1IMU0	Lactococcus_phage	100.0	1.6e-40
ARD92999.1|565405_566695_+	prophage lysin	NA	A0A1P8BLG2	Lactococcus_phage	97.4	2.0e-240
ARD93000.1|567178_567358_+	hypothetical protein	NA	Q9AZG2	Lactococcus_phage	94.9	2.3e-22
567853:567880	attR	CCCTCGGATCATGGTGCCAAACCTCGCC	NA	NA	NA	NA
>prophage 7
CP015895	Lactococcus lactis subsp. lactis strain 184 chromosome, complete genome	2342519	586125	598608	2342519	head,protease,integrase	Lactococcus_phage(95.65%)	23	586383:586411	600975:601003
ARD93018.1|586125_586401_+	bacterial nucleoid protein Hbs	NA	A7KV42	Bacillus_phage	67.4	1.6e-22
586383:586411	attL	GAAAGACGCAGTTAAATAATTATAGCTAT	NA	NA	NA	NA
ARD93019.1|586510_587659_-|integrase	Phage integrase	integrase	Q9AZF9	Lactococcus_phage	100.0	1.4e-210
ARD93020.1|587782_588274_-	prophage protein	NA	Q9AZF8	Lactococcus_phage	100.0	3.7e-83
ARD93021.1|588327_588624_-	prophage protein	NA	Q9AZF7	Lactococcus_phage	100.0	3.3e-50
ARD93022.1|588670_589258_-	prophage protein	NA	Q9AZF6	Lactococcus_phage	100.0	3.6e-109
ARD93023.1|589269_589638_-	Transcriptional regulator xre family	NA	Q9AZF5	Lactococcus_phage	100.0	1.8e-66
ARD93024.1|589931_590123_+	prophage protein	NA	Q9AZF4	Lactococcus_phage	100.0	8.6e-28
ARD93025.1|590138_590399_+	prophage protein	NA	Q9AZF3	Lactococcus_phage	100.0	8.6e-47
ARD93026.1|590557_590752_+	prophage protein	NA	Q9AZF2	Lactococcus_phage	100.0	1.0e-28
ARD93027.1|590756_591182_+	prophage protein	NA	Q9AZF1	Lactococcus_phage	100.0	2.6e-77
ARD93028.1|591216_591456_+	prophage protein	NA	Q9AZF0	Lactococcus_phage	100.0	3.6e-39
ARD93029.1|591452_591707_+	prophage protein	NA	Q9AZE9	Lactococcus_phage	100.0	3.7e-42
ARD93030.1|591703_591898_+	prophage protein	NA	Q9AZE8	Lactococcus_phage	100.0	2.3e-28
ARD93031.1|591884_592211_+	prophage protein	NA	Q9AZE7	Lactococcus_phage	99.1	2.4e-54
ARD93032.1|592218_592797_+	prophage protein	NA	Q9AZE6	Lactococcus_phage	99.5	9.8e-91
ARD93033.1|592789_594232_+	prophage protein	NA	Q9AZE5	Lactococcus_phage	100.0	1.6e-278
ARD93034.1|594541_595126_+	prophage protein	NA	Q9AZE4	Lactococcus_phage	100.0	2.9e-106
ARD93035.1|595302_595488_+	prophage protein	NA	Q9AZE3	Lactococcus_phage	95.1	1.1e-24
ARD93036.1|595513_596122_+	prophage protein	NA	Q9AZE2	Lactococcus_phage	95.0	1.6e-96
ARD93037.1|596130_596721_+|head,protease	prohead protease	head,protease	Q9AZE1	Lactococcus_phage	98.0	1.1e-105
ARD93038.1|596934_597264_+	prophage protein	NA	Q9AZE0	Lactococcus_phage	96.3	3.0e-52
ARD93039.1|597366_597717_+	prophage protein	NA	Q9AZD9	Lactococcus_phage	95.3	5.6e-49
ARD93040.1|598428_598608_+	hypothetical protein	NA	Q9AZG2	Lactococcus_phage	87.9	6.8e-19
600975:601003	attR	GAAAGACGCAGTTAAATAATTATAGCTAT	NA	NA	NA	NA
>prophage 8
CP015895	Lactococcus lactis subsp. lactis strain 184 chromosome, complete genome	2342519	1027634	1066468	2342519	holin,portal,transposase,terminase,integrase,capsid	Lactococcus_phage(92.45%)	65	1026375:1026391	1071876:1071892
1026375:1026391	attL	AGTAAATTTTACTGACA	NA	NA	NA	NA
ARD93438.1|1027634_1028768_-|integrase	Phage integrase	integrase	A0A059NT56	Lactococcus_phage	93.4	1.2e-193
ARD93439.1|1028936_1029107_+	prophage protein	NA	NA	NA	NA	NA
ARD93440.1|1029090_1029957_-	prophage protein	NA	NA	NA	NA	NA
ARD93441.1|1030010_1030307_-	prophage protein	NA	Q9AZF7	Lactococcus_phage	99.0	2.1e-49
ARD93442.1|1030386_1030587_-	prophage protein	NA	A0A1P8BMQ1	Lactococcus_phage	89.4	5.8e-27
ARD93443.1|1030646_1031393_-	transcriptional regulator	NA	D7RWL5	Brochothrix_phage	48.4	4.7e-45
ARD93444.1|1031584_1031812_+	prophage protein	NA	A0A1P8BLF6	Lactococcus_phage	100.0	1.2e-33
ARD93445.1|1031841_1032060_+	prophage protein	NA	A0A059NT62	Lactococcus_phage	95.8	1.6e-30
ARD93446.1|1032308_1033046_+	phage anti-repressor protein	NA	R9QMT9	Lactococcus_phage	81.7	3.1e-105
ARD93447.1|1033058_1033295_+	prophage protein	NA	A0A059NT59	Lactococcus_phage	98.7	2.8e-36
ARD93448.1|1033448_1033613_+	prophage protein	NA	NA	NA	NA	NA
ARD93449.1|1033593_1033995_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
ARD93450.1|1034099_1034336_+	prophage protein	NA	Q9MC36	Lactococcus_phage	97.4	3.0e-38
ARD93451.1|1034440_1035247_+	prophage protein	NA	A0A1B1IM00	Lactococcus_phage	98.5	3.1e-151
ARD93452.1|1035240_1036161_+	prophage protein	NA	Q8LTN3	Lactococcus_phage	100.0	2.1e-167
ARD93453.1|1036425_1036941_+	phage protein, replication protein	NA	M1PS00	Streptococcus_phage	50.5	3.2e-24
ARD93454.1|1036990_1037326_+	prephenate dehydrogenase	NA	A5GZ47	Lactococcus_phage	94.6	1.0e-52
ARD93455.1|1037318_1037561_+	prophage protein	NA	A5GZ49	Lactococcus_phage	96.2	2.5e-40
ARD93456.1|1037573_1037984_+	prophage protein	NA	A5GZ50	Lactococcus_phage	100.0	1.3e-76
ARD93457.1|1038091_1038256_+	prophage protein	NA	A0A1P8BM01	Lactococcus_phage	98.1	1.1e-23
ARD93458.1|1038230_1038596_+	prophage protein	NA	A0A1P8BLY8	Lactococcus_phage	100.0	2.3e-61
ARD93459.1|1038611_1039121_+	prophage protein	NA	Q9AZU7	Lactococcus_phage	100.0	1.3e-09
ARD93460.1|1039129_1039462_+	prophage protein	NA	Q9G0E0	Lactococcus_phage	88.2	7.5e-11
ARD93461.1|1039442_1039709_+	prophage protein	NA	NA	NA	NA	NA
ARD93462.1|1039709_1039907_+	prophage protein	NA	NA	NA	NA	NA
ARD93463.1|1039903_1040179_+	prophage protein	NA	A0A1P8BLM3	Lactococcus_phage	98.9	2.8e-48
ARD93464.1|1040175_1040748_+	prophage protein	NA	Q9AZU5	Lactococcus_phage	56.0	7.8e-40
ARD93465.1|1040744_1040978_+	prophage protein	NA	A0A1P8BMH6	Lactococcus_phage	60.8	5.2e-19
ARD93466.1|1040974_1041307_+	prophage protein	NA	NA	NA	NA	NA
ARD93467.1|1041275_1041590_+	prophage protein	NA	Q9MBV6	Lactococcus_phage	84.1	3.5e-26
ARD93468.1|1041586_1041922_+	prophage protein	NA	A0A1B1IMW5	Lactococcus_phage	90.8	1.4e-49
ARD93469.1|1041940_1042177_+	prophage protein	NA	A0A1P8BMS6	Lactococcus_phage	48.1	8.5e-09
ARD93470.1|1042173_1042374_+	prophage protein	NA	A0A1P8BKA6	Lactococcus_phage	90.9	1.0e-31
ARD93471.1|1042609_1042852_+	prophage protein	NA	Q8LTL7	Lactococcus_phage	71.2	1.4e-27
ARD93472.1|1042966_1043179_+	prophage protein	NA	Q9AZN3	Lactococcus_phage	92.9	1.6e-27
ARD93473.1|1043259_1043682_+	prophage protein	NA	Q9AYX5	Lactococcus_phage	100.0	5.5e-75
ARD93474.1|1043865_1044081_+	prophage protein	NA	NA	NA	NA	NA
ARD93475.1|1044152_1044911_-|transposase	transposase helper protein for IS712H	transposase	A0A059NT77	Lactococcus_phage	100.0	5.3e-137
ARD93476.1|1044922_1046146_-|transposase	transposase for insertion sequence element IS712H	transposase	A0A059NT83	Lactococcus_phage	100.0	4.9e-233
ARD93477.1|1046260_1046629_+	prophage protein	NA	D2IYV7	Enterococcus_phage	31.2	1.7e-08
ARD93478.1|1046631_1046730_+	prophage protein	NA	NA	NA	NA	NA
ARD93479.1|1046801_1047212_+|terminase	Phage terminase small subunit	terminase	Q9AZ67	Lactococcus_phage	97.1	1.0e-65
ARD93480.1|1047204_1048593_+|terminase	Phage terminase large subunit	terminase	Q8LTR4	Lactococcus_phage	98.5	9.1e-268
ARD93481.1|1048607_1049984_+|portal	Phage portal protein SPP1 Gp6-like protein	portal	Q9AZ65	Lactococcus_phage	92.1	1.1e-236
ARD93482.1|1049987_1051028_+	Phage Mu protein F like protein	NA	A0A1P8BKT0	Lactococcus_phage	96.2	4.5e-187
ARD93483.1|1051034_1051166_+	prophage protein	NA	NA	NA	NA	NA
ARD93484.1|1051125_1051473_-	prophage protein	NA	NA	NA	NA	NA
ARD93485.1|1051657_1052254_+	prophage protein	NA	A0A1P8BLK5	Lactococcus_phage	98.0	1.5e-62
ARD93486.1|1052271_1053135_+|capsid	capsid protein	capsid	A0A1P8BKP7	Lactococcus_phage	98.6	2.9e-155
ARD93487.1|1053200_1053392_+	prophage protein	NA	A0A1P8BKI7	Lactococcus_phage	96.8	3.4e-24
ARD93488.1|1053405_1053738_+	prophage protein	NA	A0A1P8BMC5	Lactococcus_phage	100.0	7.1e-54
ARD93489.1|1053734_1054046_+	prophage protein	NA	Q8LTQ6	Lactococcus_phage	98.1	6.1e-55
ARD93490.1|1054042_1054414_+	prophage protein	NA	B5SP35	Lactococcus_phage	86.6	2.8e-51
ARD93491.1|1054410_1054806_+	prophage protein	NA	A0A1P8BM84	Lactococcus_phage	96.9	1.1e-64
ARD93492.1|1054816_1055314_+	prophage protein	NA	A0A1P8BKV6	Lactococcus_phage	98.8	2.8e-86
ARD93493.1|1055429_1055765_+	prophage protein	NA	Q77RZ7	Lactococcus_phage	99.1	4.2e-54
ARD93494.1|1055803_1056124_+	prophage protein	NA	Q9AZ59	Lactococcus_phage	100.0	5.8e-53
ARD93495.1|1056138_1058952_+	prophage TMP	NA	Q9G097	Lactococcus_phage	92.1	6.7e-286
ARD93496.1|1058965_1059727_+	prophage DIT	NA	Q9AYV7	Lactococcus_phage	98.4	3.0e-140
ARD93497.1|1059726_1062480_+	prophage TAL	NA	A0A1P8BMA1	Lactococcus_phage	96.5	0.0e+00
ARD93498.1|1062492_1063974_+	prophage BPP	NA	A0A1L2JXK8	Streptococcus_phage	73.9	2.9e-139
ARD93499.1|1064148_1064544_+	prophage protein	NA	NA	NA	NA	NA
ARD93500.1|1064671_1064977_+	prophage protein	NA	A0A1P8BKN8	Lactococcus_phage	96.0	8.9e-51
ARD93501.1|1064963_1065188_+|holin	phage holin	holin	A0A059NT58	Lactococcus_phage	87.8	9.1e-29
ARD93502.1|1065184_1066468_+	prophage lysin	NA	B5SP49	Lactococcus_phage	91.9	2.9e-220
1071876:1071892	attR	AGTAAATTTTACTGACA	NA	NA	NA	NA
>prophage 9
CP015895	Lactococcus lactis subsp. lactis strain 184 chromosome, complete genome	2342519	1108355	1122137	2342519		Enterococcus_phage(25.0%)	12	NA	NA
ARD93543.1|1108355_1109048_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	34.4	2.7e-31
ARD93544.1|1109040_1109976_+	cell division protein ftsX-like protein	NA	NA	NA	NA	NA
ARD93545.1|1110077_1111055_-	ribonucleoside-diphosphate reductase class Ib beta subunit	NA	A0A096XT60	Enterococcus_phage	66.2	2.4e-118
ARD93546.1|1111404_1113573_-	ribonucleoside-diphosphate reductase class Ib alpha subunit	NA	A8E2R1	Enterococcus_phage	61.1	3.9e-257
ARD93547.1|1113708_1114131_-	Ribonucleotide reduction protein	NA	A0A142F1R4	Bacillus_phage	37.3	2.3e-12
ARD93548.1|1114132_1114351_-	ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit	NA	C3U2K9	Lactococcus_phage	47.6	7.6e-12
ARD93549.1|1114524_1115163_-	acyl-phosphate glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
ARD93550.1|1115437_1117372_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	43.4	5.4e-125
ARD93551.1|1117576_1118116_+	isochorismatase	NA	NA	NA	NA	NA
ARD93552.1|1118108_1118942_+	DNA polymerase III epsilon subunit related 3-5 exonuclease	NA	A0A0K2SUJ2	Clostridium_phage	39.4	3.1e-21
ARD93553.1|1118938_1119388_+	Acetyltransferase GNAT family	NA	NA	NA	NA	NA
ARD93554.1|1119662_1122137_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	32.2	4.2e-98
>prophage 10
CP015895	Lactococcus lactis subsp. lactis strain 184 chromosome, complete genome	2342519	1130795	1139063	2342519		Staphylococcus_phage(50.0%)	9	NA	NA
ARD93563.1|1130795_1131884_+	riboflavin biosynthesis protein RibD	NA	A0A1V0SE20	Indivirus	39.1	1.7e-51
ARD93564.1|1131883_1132534_+	Riboflavin synthase alpha chain	NA	A0A2H4PQS5	Staphylococcus_phage	43.6	1.2e-41
ARD93565.1|1132542_1133739_+	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	51.0	1.3e-110
ARD93566.1|1133766_1134231_+	Riboflavin synthase beta chain	NA	A0A2H4PQS3	Staphylococcus_phage	53.7	1.8e-39
ARD93567.1|1134333_1134786_+	signal peptidase II Aspartic peptidase MEROPS family A08	NA	NA	NA	NA	NA
ARD93568.1|1134846_1135752_+	ribosomal large subunit pseudouridine synthase D	NA	A0A2H4UV25	Bodo_saltans_virus	28.2	5.4e-11
ARD93569.1|1135898_1136342_+	hypothetical protein	NA	NA	NA	NA	NA
ARD93570.1|1136532_1138104_+	hypothetical protein	NA	NA	NA	NA	NA
ARD93571.1|1138106_1139063_+	Glycosyltransferase	NA	I1TED8	Salmonella_phage	37.5	4.0e-49
>prophage 11
CP015895	Lactococcus lactis subsp. lactis strain 184 chromosome, complete genome	2342519	1586457	1596758	2342519	protease	Synechococcus_phage(33.33%)	8	NA	NA
ARD93986.1|1586457_1588014_-	IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	45.3	5.7e-69
ARD93987.1|1588189_1588732_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.9	1.8e-09
ARD93988.1|1588868_1589906_-	Saccharopine dehydrogenase related protein	NA	NA	NA	NA	NA
ARD93989.1|1590036_1590567_+	Transcriptional regulator TetR family	NA	NA	NA	NA	NA
ARD93990.1|1590617_1592207_-	Multidrug resistance ABC transporter ATP-binding and permease protein	NA	W8CYL7	Bacillus_phage	22.2	3.0e-09
ARD93991.1|1592373_1592922_-	formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	31.1	2.8e-18
ARD93992.1|1592949_1593966_-	Phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	40.7	4.9e-61
ARD93993.1|1594154_1596758_-|protease	ATP-dependent Clp protease chaperonin ATPase ClpB	protease	K4FB40	Cronobacter_phage	32.8	9.4e-125
>prophage 12
CP015895	Lactococcus lactis subsp. lactis strain 184 chromosome, complete genome	2342519	1796099	1805958	2342519	tRNA	Prochlorococcus_phage(33.33%)	9	NA	NA
ARD94188.1|1796099_1796861_-	phosphate transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.0	1.5e-17
ARD94189.1|1797026_1797836_-	phosphate ABC transporter ATP-binding protein PhoT family	NA	W8CYL7	Bacillus_phage	26.5	7.0e-10
ARD94190.1|1797869_1798763_-	phosphate ABC transporter membrane protein 2 PhoT family	NA	NA	NA	NA	NA
ARD94191.1|1798762_1799686_-	phosphate transport system permease protein pstD	NA	NA	NA	NA	NA
ARD94192.1|1799806_1800631_-	phosphate ABC transporter substrate-binding protein PhoT family	NA	E3SNT9	Prochlorococcus_phage	29.4	1.8e-05
ARD94193.1|1801004_1801901_-	phosphate transport substrate binding protein pstF	NA	E3SM63	Prochlorococcus_phage	32.4	7.2e-08
ARD94194.1|1802178_1802646_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	56.6	2.7e-43
ARD94195.1|1802677_1803235_-	Lysophospholipase L1 related esterase	NA	NA	NA	NA	NA
ARD94196.1|1803339_1805958_-|tRNA	alanyl-tRNA synthetase	tRNA	A0A1V0SK38	Klosneuvirus	33.7	7.1e-64
>prophage 13
CP015895	Lactococcus lactis subsp. lactis strain 184 chromosome, complete genome	2342519	2034041	2048419	2342519	tRNA,integrase	Lactococcus_phage(94.74%)	21	2036202:2036222	2048520:2048540
ARD94409.1|2034041_2035082_-|tRNA	phenylalanyl-tRNA synthetase alpha subunit	tRNA	A0A2I2L4E3	Orpheovirus	34.3	1.9e-28
ARD94410.1|2035535_2036069_+	Phenolic acid decarboxylase	NA	NA	NA	NA	NA
2036202:2036222	attL	ATATAATAGAATAGACAGTTT	NA	NA	NA	NA
ARD94411.1|2037546_2038467_-	prophage protein	NA	Q9AZG0	Lactococcus_phage	99.7	1.6e-172
ARD94412.1|2038478_2038775_-	prophage protein	NA	Q9AZG1	Lactococcus_phage	100.0	1.6e-49
ARD94413.1|2038963_2039143_-	DNA-binding helix-turn-helix protein	NA	Q9AZG2	Lactococcus_phage	100.0	9.2e-24
ARD94414.1|2039334_2039565_-	prophage protein	NA	Q9AZG3	Lactococcus_phage	100.0	1.5e-39
ARD94415.1|2039707_2040214_-	Acetyltransferase	NA	Q9AZG4	Lactococcus_phage	100.0	4.2e-90
ARD94416.1|2040373_2040544_-	prophage protein	NA	Q9AZG5	Lactococcus_phage	100.0	8.2e-06
ARD94417.1|2040768_2041131_-	prophage protein	NA	Q9AZG6	Lactococcus_phage	100.0	3.4e-57
ARD94418.1|2041147_2041720_-	prophage protein	NA	Q9AZG7	Lactococcus_phage	100.0	2.1e-98
ARD94419.1|2041881_2042088_-	prophage protein	NA	Q9AZG9	Lactococcus_phage	100.0	1.6e-32
ARD94420.1|2042106_2042289_-	prophage protein	NA	Q9AZH0	Lactococcus_phage	100.0	1.4e-27
ARD94421.1|2042657_2044355_-	prophage protein	NA	Q9AZH2	Lactococcus_phage	99.8	1.6e-250
ARD94422.1|2044365_2044635_-	prophage protein	NA	Q9AZH3	Lactococcus_phage	100.0	1.3e-40
ARD94423.1|2044631_2044784_-	prophage protein	NA	Q9AZH4	Lactococcus_phage	100.0	1.4e-20
ARD94424.1|2044871_2045036_-	prophage protein	NA	Q9AZH5	Lactococcus_phage	98.1	4.6e-22
ARD94425.1|2045037_2045208_-	prophage protein	NA	Q9AZH6	Lactococcus_phage	98.2	3.0e-24
ARD94426.1|2045446_2045962_-	prophage protein	NA	Q9AZH8	Lactococcus_phage	100.0	4.2e-93
ARD94427.1|2046076_2046283_-	prophage protein, transcriptional regulator	NA	NA	NA	NA	NA
ARD94428.1|2046431_2047139_+	prophage protein	NA	Q9AZH9	Lactococcus_phage	100.0	1.8e-123
ARD94429.1|2047219_2048419_+|integrase	Phage integrase	integrase	Q9AZI0	Lactococcus_phage	99.5	3.4e-223
2048520:2048540	attR	ATATAATAGAATAGACAGTTT	NA	NA	NA	NA
