The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP020437	Bacillus sp. FDAARGOS_235 chromosome, complete genome	5287334	391584	440602	5287334	capsid,integrase,holin,protease,portal,tail,terminase,head	Bacillus_phage(71.05%)	54	422163:422180	443977:443994
ARC28102.1|391584_392649_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A0A7AQV3	Bacillus_phage	92.4	2.1e-192
ARC28103.1|392645_392885_-|holin	holin	holin	A0A0A7AR38	Bacillus_phage	94.9	5.0e-33
ARC28104.1|392884_393121_-	hypothetical protein	NA	A0A288WG97	Bacillus_phage	83.3	5.1e-14
ARC28105.1|393182_393557_-	phosphodiesterase	NA	NA	NA	NA	NA
ARC28106.1|393556_396808_-	hypothetical protein	NA	A0A0U4JID8	Exiguobacterium_phage	35.3	2.3e-80
ARC28107.1|396818_397604_-|tail	phage tail family protein	tail	A0A2H4JBY6	uncultured_Caudovirales_phage	51.4	5.8e-70
ARC28108.1|397600_402484_-|tail	phage tail protein	tail	A0A2H4JI37	uncultured_Caudovirales_phage	86.1	0.0e+00
ARC28109.1|402647_403022_-	hypothetical protein	NA	A0A2H4JBU8	uncultured_Caudovirales_phage	89.5	8.6e-56
ARC28110.1|403082_403652_-|tail	phage tail protein	tail	A0A2H4JET9	uncultured_Caudovirales_phage	89.4	2.5e-91
ARC28111.1|403667_404030_-	DUF3168 domain-containing protein	NA	A0A2H4JBW1	uncultured_Caudovirales_phage	85.8	9.2e-55
ARC28112.1|404026_404464_-	hypothetical protein	NA	A0A2H4JBV5	uncultured_Caudovirales_phage	77.9	3.8e-63
ARC28113.1|404451_404799_-|head,tail	head-tail adaptor protein	head,tail	A0A2H4JHA9	uncultured_Caudovirales_phage	87.0	9.1e-52
ARC28114.1|404795_405062_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A1B1P7Q8	Bacillus_phage	89.7	1.6e-35
ARC28115.1|405070_405271_-	fibronectin type III domain-containing protein	NA	NA	NA	NA	NA
ARC28116.1|405347_406529_-|capsid	phage major capsid protein	capsid	A0A1B1P7R4	Bacillus_phage	93.6	6.0e-204
ARC28117.1|406528_407281_-|protease	Clp protease ClpP	protease	A0A0U3U021	Bacillus_phage	93.6	3.3e-131
ARC28118.1|407258_408473_-|portal	phage portal protein	portal	A0A0U3SQF0	Bacillus_phage	94.3	9.8e-226
ARC28119.1|408488_410261_-|terminase	terminase large subunit	terminase	A0A1B1P7R3	Bacillus_phage	95.8	0.0e+00
ARC28120.1|410241_410622_-|terminase	phage terminase small subunit P27 family	terminase	A0A1B1P7R2	Bacillus_phage	97.6	1.8e-64
ARC28121.1|410783_411146_-	HNH endonuclease	NA	A0A1B1P8D2	Bacillus_phage	80.0	3.1e-50
ARC28122.1|411138_411354_-	hypothetical protein	NA	NA	NA	NA	NA
ARC28123.1|411790_413242_+	hypothetical protein	NA	NA	NA	NA	NA
ARC28124.1|413564_414359_+	FRG domain-containing protein	NA	NA	NA	NA	NA
ARC28125.1|414480_415023_-|integrase	site-specific integrase	integrase	A0A1B1P7Y2	Bacillus_phage	88.3	8.0e-87
ARC28126.1|415019_415493_-	ArpU family transcriptional regulator	NA	A0A1B1P7X5	Bacillus_phage	90.4	1.8e-74
ARC28127.1|415516_415687_-	hypothetical protein	NA	A0A1B0T6D0	Bacillus_phage	78.6	4.2e-10
ARC28128.1|415803_416001_-	hypothetical protein	NA	NA	NA	NA	NA
ARC28129.1|416304_416991_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
ARC28130.1|417246_417531_+	DUF4183 domain-containing protein	NA	NA	NA	NA	NA
ARC28131.1|419034_419823_+	RNA methyltransferase	NA	A0A288WG17	Bacillus_phage	64.1	6.2e-96
422163:422180	attL	TAAAATAACGCTTTTGTT	NA	NA	NA	NA
ARC28132.1|422929_423394_-	nucleotide pyrophosphohydrolase	NA	A0A0U4IBD0	Bacillus_phage	47.4	2.5e-20
ARC28133.1|423409_423838_-	hypothetical protein	NA	A0A1Z1LZQ8	Bacillus_phage	35.7	3.2e-06
ARC28134.1|423850_424105_-	hypothetical protein	NA	A0A0U3SU43	Bacillus_phage	89.3	3.6e-37
ARC28135.1|424119_424293_-	DUF3954 domain-containing protein	NA	A0A1B1P7U5	Bacillus_phage	94.7	2.8e-25
ARC28136.1|424319_424514_-	hypothetical protein	NA	A0A1B1P7U7	Bacillus_phage	89.1	3.7e-26
ARC28137.1|424516_425380_-	hypothetical protein	NA	A0A1B0T6C3	Bacillus_phage	70.8	1.8e-101
ARC28138.1|425321_426185_-	replication protein	NA	V5UQV4	Oenococcus_phage	40.5	2.2e-38
ARC28139.1|426190_426367_-	hypothetical protein	NA	A0A1B1P7U0	Bacillus_phage	79.3	2.1e-20
ARC28140.1|426396_426561_-	hypothetical protein	NA	A0A1B1P8G4	Bacillus_phage	85.4	5.0e-16
ARC28141.1|426560_426827_-	DNA-binding protein	NA	A0A0U3ULL9	Bacillus_phage	94.1	2.2e-37
ARC28142.1|427050_427323_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
ARC28143.1|427487_427835_+	XRE family transcriptional regulator	NA	S5MUA5	Brevibacillus_phage	38.3	5.1e-10
ARC32766.1|427845_428028_-	hypothetical protein	NA	NA	NA	NA	NA
ARC32767.1|428319_429447_-	hypothetical protein	NA	H0UST6	Bacillus_phage	52.1	5.3e-109
ARC28144.1|430115_431225_+|integrase	site-specific integrase	integrase	A0A0U3U8Y8	Bacillus_phage	78.4	6.4e-147
ARC28145.1|431293_431962_-	DUF3962 domain-containing protein	NA	NA	NA	NA	NA
AVI60572.1|432243_432444_+	hypothetical protein	NA	NA	NA	NA	NA
ARC28146.1|432757_432967_+	hypothetical protein	NA	NA	NA	NA	NA
ARC28147.1|433572_434076_-	hypothetical protein	NA	NA	NA	NA	NA
ARC28148.1|434573_435410_-	exosporium leader peptide-containing protein	NA	NA	NA	NA	NA
ARC28149.1|436023_436260_-	hypothetical protein	NA	A0A2H4JHE9	uncultured_Caudovirales_phage	79.1	7.9e-23
ARC28150.1|436205_437411_-|terminase	terminase	terminase	A0A0U4B089	Bacillus_phage	59.4	5.8e-69
ARC28151.1|437764_439729_-|protease	M6 family metalloprotease domain-containing protein	protease	NA	NA	NA	NA
ARC28152.1|440059_440602_-|integrase	site-specific integrase	integrase	W8CYP1	Bacillus_phage	90.0	7.3e-88
443977:443994	attR	TAAAATAACGCTTTTGTT	NA	NA	NA	NA
>prophage 2
CP020437	Bacillus sp. FDAARGOS_235 chromosome, complete genome	5287334	2608142	2616517	5287334		Synechococcus_phage(50.0%)	8	NA	NA
ARC30153.1|2608142_2608730_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.4	5.9e-27
ARC30154.1|2608726_2609767_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	45.6	1.2e-67
ARC30155.1|2609871_2611287_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.4	7.3e-55
ARC30156.1|2611271_2613491_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.3	2.8e-162
ARC30157.1|2613474_2614158_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
ARC30158.1|2614154_2614409_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
ARC30159.1|2614401_2615121_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	44.3	3.0e-49
ARC30160.1|2615209_2616517_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	25.5	4.9e-21
>prophage 3
CP020437	Bacillus sp. FDAARGOS_235 chromosome, complete genome	5287334	3808451	3816124	5287334		uncultured_Caudovirales_phage(16.67%)	10	NA	NA
ARC31284.1|3808451_3809435_+	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.2	1.1e-17
ARC31285.1|3809424_3810195_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.6	1.7e-13
ARC31286.1|3810227_3810992_+	SrtB family sortase	NA	NA	NA	NA	NA
ARC31287.1|3811058_3811382_-	heme-degrading monooxygenase	NA	NA	NA	NA	NA
ARC31288.1|3811668_3812868_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	41.0	4.3e-72
ARC31289.1|3812907_3813102_-	YwbE family protein	NA	NA	NA	NA	NA
ARC31290.1|3813102_3813276_-	hypothetical protein	NA	NA	NA	NA	NA
ARC31291.1|3813444_3814137_+	DNA-binding response regulator	NA	B5LWA6	Feldmannia_species_virus	27.9	4.0e-06
ARC31292.1|3814138_3815074_+	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	26.3	6.3e-23
ARC31293.1|3815200_3816124_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	43.1	5.3e-46
>prophage 4
CP020437	Bacillus sp. FDAARGOS_235 chromosome, complete genome	5287334	4596592	4654977	5287334	capsid,bacteriocin,tRNA,integrase,protease,portal,tail,terminase,head	Bacillus_phage(28.21%)	65	4589135:4589152	4641504:4641521
4589135:4589152	attL	TTGCATTGCTATTTGAAT	NA	NA	NA	NA
ARC32092.1|4596592_4597546_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
ARC32093.1|4597567_4597792_+	RNA-binding protein Hfq	NA	NA	NA	NA	NA
ARC32094.1|4597872_4601625_-	collagen-like repeat preface domain-containing protein	NA	NA	NA	NA	NA
ARC32095.1|4601738_4602704_-|integrase	integrase	integrase	NA	NA	NA	NA
AVI60642.1|4602969_4603926_+	stage V sporulation protein K	NA	G3MAX6	Bacillus_virus	42.7	1.0e-52
ARC32098.1|4604196_4604820_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
AVI60643.1|4604909_4606187_+	GTPase HflX	NA	NA	NA	NA	NA
ARC32099.1|4606179_4607451_+	hypothetical protein	NA	NA	NA	NA	NA
ARC32100.1|4607625_4608015_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
ARC32101.1|4608063_4609398_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
ARC32102.1|4609512_4610658_-|integrase	site-specific integrase	integrase	A0A0M5M609	Bacillus_phage	38.5	1.5e-66
ARC32103.1|4610699_4610858_-	hypothetical protein	NA	NA	NA	NA	NA
ARC32104.1|4610874_4611303_-	ImmA/IrrE family metallo-endopeptidase	NA	Q9T201	Bacillus_phage	55.1	8.1e-34
ARC32105.1|4611325_4611790_-	XRE family transcriptional regulator	NA	S6C481	Thermus_phage	51.3	3.2e-28
ARC32927.2|4611932_4612202_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
ARC32106.1|4612176_4612884_+	Rha family transcriptional regulator	NA	A0A288WFT2	Bacillus_phage	45.8	3.5e-50
ARC32107.1|4612992_4613259_+	group-specific protein	NA	S5MC08	Brevibacillus_phage	57.0	6.6e-26
ARC32108.1|4613234_4613420_+	hypothetical protein	NA	NA	NA	NA	NA
ARC32109.1|4613379_4613727_+	hypothetical protein	NA	NA	NA	NA	NA
ARC32110.1|4613995_4614622_+	hypothetical protein	NA	Q9MC50	Pseudomonas_phage	41.1	2.3e-37
ARC32111.1|4614644_4614917_+	hypothetical protein	NA	A0A0M4S680	Bacillus_phage	80.9	1.4e-36
ARC32112.1|4614913_4615672_+	replication protein	NA	A0A1W6JNI1	Staphylococcus_phage	54.5	1.1e-60
ARC32113.1|4615607_4616438_+	hypothetical protein	NA	U5PWH5	Bacillus_phage	38.7	1.2e-36
ARC32114.1|4616454_4616625_+	hypothetical protein	NA	NA	NA	NA	NA
AVI60644.1|4616621_4617251_+	hypothetical protein	NA	A0A0M4RU33	Bacillus_phage	41.9	3.7e-27
ARC32115.1|4617253_4617376_+	Fur-regulated basic protein FbpA	NA	NA	NA	NA	NA
ARC32116.1|4617470_4618043_+	dUTPase	NA	A0A0A7AQI4	Bacillus_phage	74.3	1.2e-80
ARC32117.1|4618323_4618707_-	hypothetical protein	NA	NA	NA	NA	NA
ARC32118.1|4619006_4619279_-	hypothetical protein	NA	NA	NA	NA	NA
ARC32119.1|4619388_4620144_+	DNA (cytosine-5-)-methyltransferase	NA	A0A0K2CYZ1	Paenibacillus_phage	49.8	1.0e-63
ARC32121.1|4620571_4620859_+	hypothetical protein	NA	A6M999	Geobacillus_virus	71.3	3.2e-34
ARC32122.1|4620863_4621238_+	ArpU family transcriptional regulator	NA	A0A0M4R397	Bacillus_phage	67.7	3.5e-41
ARC32123.1|4621425_4623432_-	hypothetical protein	NA	NA	NA	NA	NA
ARC32124.1|4624009_4624513_+	RNA polymerase subunit sigma-70	NA	A0A1L2JY33	Aeribacillus_phage	63.5	4.4e-55
ARC32125.1|4624838_4626956_+	DUF2813 domain-containing protein	NA	NA	NA	NA	NA
ARC32126.1|4626988_4627843_+	TIGR02646 family protein	NA	NA	NA	NA	NA
ARC32127.1|4628263_4628461_+	hypothetical protein	NA	NA	NA	NA	NA
ARC32128.1|4628429_4628705_+	DNA-binding protein	NA	A0A2H4JBQ8	uncultured_Caudovirales_phage	43.8	1.2e-09
ARC32129.1|4628802_4630650_+	hypothetical protein	NA	NA	NA	NA	NA
ARC32130.1|4630803_4631226_-	HicB family protein	NA	A0A1L2JY34	Aeribacillus_phage	58.3	1.3e-39
ARC32131.1|4631496_4631658_-	hypothetical protein	NA	NA	NA	NA	NA
ARC32132.1|4631838_4632453_+	hypothetical protein	NA	NA	NA	NA	NA
ARC32133.1|4632713_4633028_+	hypothetical protein	NA	NA	NA	NA	NA
ARC32134.1|4633085_4633292_-	hypothetical protein	NA	NA	NA	NA	NA
ARC32135.1|4633426_4634020_+	hypothetical protein	NA	L0P6F5	Lactobacillus_phage	42.7	6.8e-39
ARC32136.1|4634020_4634326_+	HNH endonuclease	NA	A0A1B0YEC6	Lactobacillus_phage	48.5	6.9e-19
ARC32928.1|4634597_4634972_+	hypothetical protein	NA	R9TQ46	Paenibacillus_phage	46.7	2.1e-17
ARC32137.1|4634968_4636657_+|terminase	terminase large subunit	terminase	A0A290GJW3	Caldibacillus_phage	70.8	1.5e-240
ARC32138.1|4636672_4637884_+|portal	phage portal protein	portal	J9QE83	Clostridium_phage	59.4	2.2e-137
ARC32139.1|4637849_4638434_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2I7SBY1	Paenibacillus_phage	50.5	4.7e-40
ARC32140.1|4638447_4639611_+|capsid	phage major capsid protein	capsid	H7BUQ0	unidentified_phage	55.1	5.7e-82
ARC32141.1|4639647_4639938_+	hypothetical protein	NA	A6XMJ7	Bacillus_virus	35.8	1.4e-05
ARC32142.1|4639934_4640213_+	DNA-packaging protein	NA	R9TMB7	Paenibacillus_phage	56.2	1.9e-20
ARC32143.1|4640209_4640509_+|head,tail	phage head-tail adapter protein	head,tail	R9TPZ2	Paenibacillus_phage	38.3	1.3e-09
ARC32144.1|4640501_4640858_+	hypothetical protein	NA	D2XR21	Bacillus_phage	60.7	1.3e-32
ARC32145.1|4640854_4641184_+	hypothetical protein	NA	A0A2H4JAG4	uncultured_Caudovirales_phage	78.0	7.9e-45
ARC32146.1|4641184_4641772_+|tail	phage tail protein	tail	D2XR23	Bacillus_phage	77.8	2.5e-81
4641504:4641521	attR	TTGCATTGCTATTTGAAT	NA	NA	NA	NA
ARC32147.1|4641778_4642141_+	hypothetical protein	NA	A0A2H4JAG8	uncultured_Caudovirales_phage	75.0	4.6e-46
ARC32148.1|4642368_4643619_+	hypothetical protein	NA	A0A2H4JAI2	uncultured_Caudovirales_phage	82.3	3.2e-179
ARC32149.2|4643885_4646279_+	hypothetical protein	NA	A0A2H4JC82	uncultured_Caudovirales_phage	47.3	5.9e-49
ARC32150.1|4646320_4647778_+|tail	phage tail protein	tail	A0A2H4JH21	uncultured_Caudovirales_phage	90.5	1.2e-267
ARC32151.1|4647774_4653159_+	hypothetical protein	NA	A0A2H4JF18	uncultured_Caudovirales_phage	72.5	0.0e+00
ARC32152.1|4653173_4653572_+	hypothetical protein	NA	A0A2H4JGF7	uncultured_Caudovirales_phage	96.2	4.2e-69
ARC32153.1|4653694_4653925_+|bacteriocin	bacteriocin biosynthesis protein	bacteriocin	A0A2H4JDF0	uncultured_Caudovirales_phage	98.7	6.3e-33
ARC32154.1|4653921_4654977_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1B0T6C8	Bacillus_phage	77.5	7.1e-164
>prophage 5
CP020437	Bacillus sp. FDAARGOS_235 chromosome, complete genome	5287334	4658982	4673222	5287334	bacteriocin	Bacillus_phage(50.0%)	14	NA	NA
ARC32157.1|4658982_4659195_+	DNA-binding protein	NA	A0A1Z1LZP5	Bacillus_phage	70.0	1.1e-18
AVI60646.1|4659369_4660968_+	hypothetical protein	NA	A0A1S5SA14	Streptococcus_phage	40.3	4.5e-77
ARC32158.1|4661579_4662239_-	helix-turn-helix domain-containing protein	NA	A0A2H4J441	uncultured_Caudovirales_phage	41.9	7.8e-36
ARC32159.1|4662441_4662705_+	hypothetical protein	NA	A6M975	Geobacillus_virus	60.0	2.8e-13
ARC32160.1|4663660_4663855_+	hypothetical protein	NA	A0A2H4J4V8	uncultured_Caudovirales_phage	71.0	2.4e-17
ARC32161.1|4664003_4664873_+	DnaD domain protein	NA	A0A2H4J394	uncultured_Caudovirales_phage	58.6	1.2e-95
ARC32162.1|4665270_4665657_+	hypothetical protein	NA	A0A288WG73	Bacillus_phage	69.8	6.4e-46
ARC32163.1|4665895_4666864_+	lysozyme family protein	NA	A0A223LKM8	Bacillus_phage	42.8	2.9e-31
ARC32164.1|4667119_4667941_+	M23 family peptidase	NA	A0A218KCJ1	Bacillus_phage	41.1	2.1e-22
ARC32165.1|4668009_4669005_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A218KCJ1	Bacillus_phage	49.0	8.4e-82
ARC32929.1|4669176_4669407_+|bacteriocin	bacteriocin biosynthesis protein	bacteriocin	A0A1B1P7Q9	Bacillus_phage	67.1	1.0e-19
ARC32166.1|4669748_4670489_+	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
ARC32167.1|4670437_4671100_+	tyrosine protein kinase	NA	NA	NA	NA	NA
ARC32168.1|4671395_4673222_+	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	30.3	5.9e-25
>prophage 1
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	0	4187	254131		Bacillus_phage(100.0%)	3	NA	NA
AVI60545.1|900_1179_-	hypothetical protein	NA	NA	NA	NA	NA
ARC27457.1|1936_3121_-	rod shape-determining protein RodA	NA	NA	NA	NA	NA
ARC27458.1|3530_4187_-	hypothetical protein	NA	A0A223LKM8	Bacillus_phage	33.7	3.4e-15
>prophage 2
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	8212	8983	254131		Planktothrix_phage(100.0%)	1	NA	NA
ARC27462.1|8212_8983_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	1.2e-32
>prophage 3
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	14687	15602	254131		Streptococcus_phage(100.0%)	1	NA	NA
ARC27469.1|14687_15602_-	YafY family transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	26.6	1.5e-08
>prophage 4
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	21739	24136	254131		Clostridioides_phage(100.0%)	1	NA	NA
ARC27475.1|21739_24136_-	peptidase	NA	A0A1V0E026	Clostridioides_phage	31.3	1.5e-63
>prophage 5
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	29134	31792	254131		Streptococcus_phage(100.0%)	1	NA	NA
ARC27482.1|29134_31792_-	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	26.3	1.2e-31
>prophage 6
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	38546	39674	254131		Bacillus_phage(100.0%)	1	NA	NA
ARC27489.1|38546_39674_-	CHAP domain-containing protein	NA	A0A0A0RPZ1	Bacillus_phage	53.4	8.7e-27
>prophage 7
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	55401	57341	254131		Clostridium_phage(50.0%)	2	NA	NA
ARC27503.1|55401_55746_+	XRE family transcriptional regulator	NA	A0A0A7RUJ5	Clostridium_phage	41.7	8.6e-10
ARC27504.1|56210_57341_-	hypothetical protein	NA	D2XQ10	Bacillus_virus	36.8	1.3e-59
>prophage 8
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	71915	74469	254131		Bacillus_phage(75.0%)	5	NA	NA
ARC27511.1|71915_72212_+	hypothetical protein	NA	H0USY0	Bacillus_phage	44.3	3.8e-14
ARC27512.1|72213_72399_+	hypothetical protein	NA	NA	NA	NA	NA
ARC27513.1|72498_73680_+	cell division protein FtsK	NA	H0USY1	Bacillus_phage	54.3	3.4e-122
ARC27514.1|73618_74233_+	hypothetical protein	NA	H0USY2	Bacillus_phage	44.7	4.7e-43
ARC27515.1|74238_74469_-	XRE family transcriptional regulator	NA	S5MBY6	Brevibacillus_phage	45.9	1.1e-13
>prophage 9
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	80907	82337	254131		Bacillus_phage(100.0%)	2	NA	NA
ARC27520.1|80907_81501_+	DUF4352 domain-containing protein	NA	A0A1B1P898	Bacillus_phage	91.1	4.7e-56
ARC27521.1|81818_82337_+	DUF4352 domain-containing protein	NA	A0A1B1P898	Bacillus_phage	75.4	2.7e-47
>prophage 10
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	87421	89204	254131	transposase	Paenibacillus_phage(50.0%)	3	NA	NA
ARC27528.1|87421_87850_+	stress protein	NA	A0A0K2CZD8	Paenibacillus_phage	44.2	2.9e-23
AVI60551.1|87882_88074_+	hypothetical protein	NA	NA	NA	NA	NA
AVI60552.1|88041_89204_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	39.7	7.9e-39
>prophage 11
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	92608	92818	254131		Clostridium_phage(100.0%)	1	NA	NA
ARC27530.1|92608_92818_-	hypothetical protein	NA	A0A0A8WI33	Clostridium_phage	57.4	1.4e-07
>prophage 12
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	106741	107911	254131		Klosneuvirus(100.0%)	1	NA	NA
ARC27540.2|106741_107911_-	hypothetical protein	NA	A0A1V0SIY6	Klosneuvirus	36.7	1.8e-06
>prophage 13
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	112885	113581	254131		Staphylococcus_phage(100.0%)	1	NA	NA
ARC27546.1|112885_113581_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.8	5.0e-25
>prophage 14
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	118395	119304	254131		Klosneuvirus(100.0%)	1	NA	NA
ARC27551.1|118395_119304_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	34.9	1.1e-32
>prophage 15
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	137352	138120	254131		Planktothrix_phage(100.0%)	1	NA	NA
ARC27564.1|137352_138120_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.6	1.3e-34
>prophage 16
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	142840	149187	254131	transposase	Bacillus_phage(66.67%)	4	NA	NA
ARC27569.1|142840_144307_-	catalase	NA	A0A2K9L572	Tupanvirus	51.4	2.0e-124
ARC27570.1|145936_146218_+	hypothetical protein	NA	NA	NA	NA	NA
ARC27571.1|146786_147482_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	38.7	3.8e-33
ARC27572.1|148065_149187_+|transposase	transposase	transposase	S6AND0	Bacillus_phage	80.2	8.3e-171
>prophage 17
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	154274	154901	254131	bacteriocin	Planktothrix_phage(100.0%)	1	NA	NA
ARC27576.1|154274_154901_+|bacteriocin	bacteriocin ABC transporter ATP-binding protein	bacteriocin	G9BWD6	Planktothrix_phage	37.4	6.5e-24
>prophage 18
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	165483	172364	254131		Staphylococcus_phage(66.67%)	7	NA	NA
ARC27585.1|165483_165789_+	ArsR family transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	37.2	1.3e-06
ARC27586.1|165849_166287_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
ARC27587.1|166305_167346_+	arsenical-resistance protein	NA	NA	NA	NA	NA
ARC27588.1|167372_167777_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	72.2	7.1e-48
ARC27652.1|168258_169002_-	hypothetical protein	NA	NA	NA	NA	NA
ARC27590.1|169641_170676_+	putative methyltransferase	NA	NA	NA	NA	NA
ARC27591.1|170696_172364_+	carbamoyl transferase	NA	M1ICZ5	Pelagibacter_phage	31.3	2.7e-56
>prophage 19
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	175492	180579	254131		Brazilian_cedratvirus(20.0%)	7	NA	NA
ARC27595.1|175492_176491_+	ATPase	NA	A0A2R8FG22	Brazilian_cedratvirus	27.8	1.6e-16
ARC27596.1|176487_177279_+	ABC transporter permease	NA	NA	NA	NA	NA
ARC27597.1|177281_178070_+	multidrug transporter permease	NA	NA	NA	NA	NA
ARC27598.1|178082_178748_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	54.1	2.6e-63
ARC27599.1|178747_179239_+	6-carboxytetrahydropterin synthase QueD	NA	J9PV91	Bacillus_phage	70.4	1.7e-59
ARC27600.1|179231_179948_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	42.5	3.8e-52
ARC27601.1|179991_180579_+	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	47.6	7.0e-44
>prophage 20
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	201293	204417	254131		Mycobacterium_phage(50.0%)	2	NA	NA
ARC27616.1|201293_203324_+	penicillin-binding protein	NA	A0A2R4AS58	Mycobacterium_phage	29.9	3.9e-09
ARC27617.1|203550_204417_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	31.2	1.5e-05
>prophage 21
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	211507	216318	254131		Enterobacteria_phage(50.0%)	3	NA	NA
ARC27623.2|211507_212131_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	29.3	3.4e-12
ARC27624.1|212303_212594_-	hypothetical protein	NA	NA	NA	NA	NA
ARC27626.1|213882_216318_+	PAS domain S-box protein	NA	A0A2K9L0Z8	Tupanvirus	26.9	2.0e-12
>prophage 22
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	225434	226226	254131		BeAn_58058_virus(100.0%)	1	NA	NA
ARC27627.1|225434_226226_+	carbonic anhydrase	NA	A0A1L3IZL1	BeAn_58058_virus	27.0	2.7e-06
>prophage 23
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	229546	232958	254131		Bacillus_phage(50.0%)	3	NA	NA
ARC27629.1|229546_230236_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	34.1	1.8e-27
ARC27630.1|230430_230841_+	hypothetical protein	NA	NA	NA	NA	NA
ARC27631.1|231143_232958_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	33.3	1.7e-43
>prophage 24
CP020434	Bacillus sp. FDAARGOS_235 plasmid 1, complete sequence	254131	242815	243985	254131		Mycobacterium_phage(100.0%)	1	NA	NA
AVI60555.1|242815_243985_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1D8EXR7	Mycobacterium_phage	28.3	1.8e-22
>prophage 1
CP020436	Bacillus sp. FDAARGOS_235 plasmid 2, complete sequence	51747	0	9725	51747		Clostridium_phage(50.0%)	4	NA	NA
ARC27673.1|497_3326_-	type 2 lantipeptide synthetase LanM	NA	NA	NA	NA	NA
ARC27674.1|3417_3585_-	type A2 lantipeptide	NA	NA	NA	NA	NA
ARC27675.1|4818_5424_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	30.7	1.1e-15
ARC27676.1|7619_9725_-	peptidase domain-containing ABC transporter	NA	A0A076FI99	Aureococcus_anophage	23.2	9.9e-16
>prophage 2
CP020436	Bacillus sp. FDAARGOS_235 plasmid 2, complete sequence	51747	23826	25038	51747		Burkholderia_phage(100.0%)	1	NA	NA
ARC27716.1|23826_25038_-	replication initiation protein	NA	E5FFJ0	Burkholderia_phage	25.2	1.1e-14
>prophage 3
CP020436	Bacillus sp. FDAARGOS_235 plasmid 2, complete sequence	51747	30045	34498	51747	integrase	Bacillus_phage(100.0%)	6	26115:26129	40011:40025
26115:26129	attL	TTTTTCAAATCCATT	NA	NA	NA	NA
ARC27692.1|30045_30972_+|integrase	site-specific integrase	integrase	A0A1B1P793	Bacillus_phage	46.6	2.5e-72
ARC27693.1|31398_31620_+	hypothetical protein	NA	NA	NA	NA	NA
ARC27694.1|32157_32412_+	hypothetical protein	NA	NA	NA	NA	NA
ARC27695.1|32488_33097_-	DUF3967 domain-containing protein	NA	A0A1Z1LZN4	Bacillus_phage	53.9	7.7e-46
ARC27696.1|33459_33822_+	hypothetical protein	NA	NA	NA	NA	NA
ARC27697.1|33937_34498_-	XRE family transcriptional regulator	NA	A0A1B1P888	Bacillus_phage	38.9	1.2e-05
40011:40025	attR	TTTTTCAAATCCATT	NA	NA	NA	NA
>prophage 4
CP020436	Bacillus sp. FDAARGOS_235 plasmid 2, complete sequence	51747	38117	43485	51747	transposase	Bacillus_phage(71.43%)	8	NA	NA
ARC27701.1|38117_39230_-|transposase	transposase	transposase	A0A286QQB7	Streptococcus_phage	45.2	7.4e-79
ARC27702.1|39241_39640_-|transposase	IS200/IS605 family transposase	transposase	A0A286QN76	Streptococcus_phage	68.2	1.5e-50
ARC27703.1|39935_40394_-	DUF559 domain-containing protein	NA	NA	NA	NA	NA
ARC27704.1|40772_40994_+	XRE family transcriptional regulator	NA	A0A0S2GLH4	Bacillus_phage	49.3	1.1e-10
ARC27705.1|41022_41676_-	hypothetical protein	NA	A0A1B1P7T2	Bacillus_phage	64.4	1.4e-77
ARC27706.1|41659_42823_-	DNA translocase FtsK	NA	W8CYG2	Bacillus_phage	70.5	3.5e-156
ARC27707.1|42835_43159_-	hypothetical protein	NA	A0A1B1P7T1	Bacillus_phage	65.4	4.8e-31
ARC27708.1|43152_43485_-	hypothetical protein	NA	A0A1B1P7T3	Bacillus_phage	69.2	1.8e-33
>prophage 5
CP020436	Bacillus sp. FDAARGOS_235 plasmid 2, complete sequence	51747	47330	49942	51747	transposase	Staphylococcus_phage(33.33%)	3	NA	NA
ARC27713.1|47330_48236_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	42.3	3.7e-44
ARC27714.1|48419_49532_-|transposase	transposase	transposase	A0A288TXV8	Enterococcus_phage	47.4	1.7e-78
ARC27715.1|49543_49942_-|transposase	IS200/IS605 family transposase	transposase	A0A286QN76	Streptococcus_phage	68.9	3.1e-51
