The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP020410	Corynebacterium diphtheriae strain FDAARGOS_197 chromosome, complete genome	2489049	62166	120896	2489049	transposase,protease,tRNA	Bacillus_phage(33.33%)	52	NA	NA
ARB86927.1|62166_62670_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
ARB86928.1|62715_63339_+	RNA polymerase subunit sigma	NA	A0A076YQ50	Rhizobium_phage	28.5	1.7e-08
ARB86929.1|63335_63587_+	mycothiol system anti-sigma-R factor	NA	NA	NA	NA	NA
ARB86930.1|63591_63936_-	DUF4288 domain-containing protein	NA	NA	NA	NA	NA
ARB86931.1|64273_64534_-	WhiB family transcriptional regulator	NA	A0A2P1N2X5	Mycobacterium_phage	45.1	2.0e-11
ARB86932.1|65166_65628_+	hypothetical protein	NA	NA	NA	NA	NA
ARB86933.1|65621_66884_-	hypothetical protein	NA	NA	NA	NA	NA
ARB86934.1|66880_68191_-	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	30.0	1.7e-42
ARB86935.1|68448_68676_+	DUF3107 domain-containing protein	NA	NA	NA	NA	NA
ARB86936.1|68678_69557_+	DUF3152 domain-containing protein	NA	NA	NA	NA	NA
ARB86937.1|69580_70438_+	TIGR02569 family protein	NA	NA	NA	NA	NA
ARB86938.1|70441_73624_+	ATP-dependent helicase	NA	NA	NA	NA	NA
ARB86939.1|73617_76848_+	ATP-dependent helicase	NA	A7KV33	Bacillus_phage	22.9	1.5e-18
ARB86940.1|76892_77981_+	Ion channel protein	NA	NA	NA	NA	NA
ARB88934.1|78012_78696_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
ARB86941.1|78688_80740_+	ATP-dependent DNA helicase UvrD2	NA	S5MMD7	Bacillus_phage	27.5	2.9e-44
ARB86942.1|80684_81578_-	hypothetical protein	NA	NA	NA	NA	NA
ARB86943.1|81613_82135_+	M48 family peptidase	NA	NA	NA	NA	NA
ARB86944.1|82131_83523_-	hydrolase	NA	NA	NA	NA	NA
ARB88935.1|83615_84656_+	PDZ domain-containing protein	NA	NA	NA	NA	NA
ARB86945.1|84667_85366_-	hypothetical protein	NA	NA	NA	NA	NA
ARB86946.1|85416_85920_-	hypothetical protein	NA	NA	NA	NA	NA
ARB86947.1|86092_89056_+	membrane protein	NA	NA	NA	NA	NA
ARB86948.1|89539_90109_-	sodium:glutamate symporter	NA	NA	NA	NA	NA
ARB86949.1|90638_91649_-|protease	protease	protease	NA	NA	NA	NA
ARB86950.1|91651_92608_-	DUF418 domain-containing protein	NA	NA	NA	NA	NA
ARB86951.1|93286_94768_+	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
ARB86952.1|94780_96337_+	acyl-CoA carboxylase subunit beta	NA	NA	NA	NA	NA
ARB86953.1|96350_96614_+	hypothetical protein	NA	NA	NA	NA	NA
ARB86954.1|96638_97007_+	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA	NA
ARB86955.1|97209_98301_+	hypothetical protein	NA	NA	NA	NA	NA
ARB86956.1|98319_99108_-	histidinol-phosphatase	NA	NA	NA	NA	NA
ARB88936.1|99164_99980_-	inositol monophosphatase family protein	NA	NA	NA	NA	NA
ARB86957.1|100159_101269_+	peptide chain release factor 2	NA	NA	NA	NA	NA
ARB86958.1|101265_102864_-	hypothetical protein	NA	NA	NA	NA	NA
ARB86959.1|103042_103732_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	37.7	1.2e-26
ARB86960.1|103748_104651_+	ABC transporter permease	NA	NA	NA	NA	NA
ARB86961.1|104757_105249_+	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	52.2	1.5e-36
ARB86962.1|105839_107219_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	33.7	7.9e-38
ARB86963.1|107328_110262_+	type 2 lantipeptide synthetase LanM	NA	NA	NA	NA	NA
ARB86964.1|110249_112382_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	26.2	5.3e-33
ARB86965.1|112381_113260_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	35.4	6.6e-30
ARB86966.1|113259_114057_+	lantibiotic ABC transporter permease	NA	NA	NA	NA	NA
AVH82649.1|114222_114489_-	hypothetical protein	NA	NA	NA	NA	NA
ARB86967.1|115523_115805_+	hypothetical protein	NA	NA	NA	NA	NA
ARB88937.2|115877_116681_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
ARB86968.1|116903_117245_-	cupin	NA	NA	NA	NA	NA
ARB86969.1|117278_118082_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
ARB86970.1|118203_118434_-	hypothetical protein	NA	NA	NA	NA	NA
ARB86971.1|118498_119902_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.4	2.0e-28
ARB86972.1|119787_120597_-|transposase	IS3 family transposase	transposase	Q6J1X2	Lactobacillus_phage	26.9	6.7e-13
ARB86973.1|120593_120896_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
>prophage 2
CP020410	Corynebacterium diphtheriae strain FDAARGOS_197 chromosome, complete genome	2489049	1208571	1259079	2489049	protease,portal,terminase,integrase,tRNA	Gordonia_phage(27.78%)	51	1203450:1203465	1262100:1262115
1203450:1203465	attL	GCGACGAGGTCTTCGA	NA	NA	NA	NA
ARB87884.1|1208571_1211280_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	37.4	7.2e-136
ARB87885.1|1211374_1212355_-	malate dehydrogenase	NA	NA	NA	NA	NA
ARB87886.1|1212837_1213590_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
ARB87887.1|1213626_1214919_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	54.2	3.3e-131
ARB87888.1|1215065_1217591_-	aminodeoxychorismate synthase, component I	NA	S4VNU7	Pandoravirus	30.4	6.2e-65
ARB87889.1|1217685_1218315_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	44.0	3.6e-38
ARB87890.1|1218332_1218932_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	46.7	3.3e-41
ARB87891.1|1219097_1220573_-	trigger factor	NA	NA	NA	NA	NA
ARB87892.1|1220578_1220758_-	hypothetical protein	NA	NA	NA	NA	NA
ARB87893.1|1221270_1221507_+	hypothetical protein	NA	NA	NA	NA	NA
ARB87894.1|1221653_1222436_+	hypothetical protein	NA	NA	NA	NA	NA
ARB87895.1|1222512_1222986_-	ribose-5-phosphate isomerase	NA	NA	NA	NA	NA
ARB87896.1|1223017_1223638_-	disulfide bond formation protein DsbA	NA	NA	NA	NA	NA
ARB87897.1|1223759_1226378_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	28.0	5.7e-45
ARB87898.1|1226633_1227650_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
ARB87899.1|1227661_1228054_+	globin	NA	NA	NA	NA	NA
ARB87900.1|1228050_1228671_-	hypothetical protein	NA	NA	NA	NA	NA
ARB87901.1|1228680_1229124_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
ARB87902.1|1229250_1230921_-	energy-dependent translational throttle protein EttA	NA	A0A2K9L3Z8	Tupanvirus	28.2	1.3e-47
ARB87903.1|1231018_1231507_-	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
ARB87904.1|1231690_1233727_-	copper resistance protein	NA	NA	NA	NA	NA
ARB87905.1|1233953_1236239_+	carbon starvation protein A	NA	NA	NA	NA	NA
ARB87906.1|1236259_1236460_+	DUF466 domain-containing protein	NA	NA	NA	NA	NA
ARB87907.1|1237931_1239137_-	MFS transporter	NA	NA	NA	NA	NA
ARB87908.1|1239541_1240573_+	oxidoreductase	NA	NA	NA	NA	NA
ARB88985.1|1240632_1241433_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
ARB87909.1|1241451_1242084_+	oligoribonuclease	NA	M4M9I5	Vibrio_phage	38.6	4.3e-23
ARB87910.1|1242261_1243092_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA	NA
ARB87911.1|1243092_1244346_-	transpeptidase	NA	NA	NA	NA	NA
ARB87912.2|1244588_1244855_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
ARB87913.1|1244943_1245177_+	DNA-binding protein	NA	NA	NA	NA	NA
ARB87914.1|1245173_1245458_+	hypothetical protein	NA	NA	NA	NA	NA
ARB87915.1|1245450_1245780_+	hypothetical protein	NA	NA	NA	NA	NA
ARB87916.1|1245751_1245979_-	hypothetical protein	NA	NA	NA	NA	NA
ARB87917.1|1246664_1247066_+	hypothetical protein	NA	NA	NA	NA	NA
ARB87918.1|1247058_1247337_+	HNH endonuclease	NA	G9FGW5	Rhodococcus_phage	61.8	3.4e-25
ARB87919.1|1247457_1247778_+	hypothetical protein	NA	NA	NA	NA	NA
ARB87920.2|1247839_1249177_+|terminase	terminase	terminase	A0A2P1CBZ2	Gordonia_phage	46.4	6.4e-101
ARB87921.1|1249415_1250465_+|portal	phage portal protein	portal	G9FGU9	Rhodococcus_phage	45.3	2.5e-52
AVH82662.1|1250448_1251000_+	hypothetical protein	NA	A0A2H4P9D2	Corynebacterium_phage	71.8	1.0e-73
ARB87922.1|1251190_1251427_+	hypothetical protein	NA	NA	NA	NA	NA
ARB87923.1|1251419_1252823_+	hypothetical protein	NA	G9FGV2	Rhodococcus_phage	42.7	2.2e-59
ARB87924.1|1252822_1253134_+	hypothetical protein	NA	A0A2P1CBZ4	Gordonia_phage	44.7	5.2e-14
ARB87925.1|1253130_1253505_+	hypothetical protein	NA	NA	NA	NA	NA
ARB87926.1|1253504_1253927_+	hypothetical protein	NA	A0A160DHJ4	Gordonia_phage	38.4	1.4e-17
ARB87927.1|1253929_1254343_+	hypothetical protein	NA	A0A2P1CBZ9	Gordonia_phage	46.9	5.6e-24
ARB87928.1|1254342_1254654_+	hypothetical protein	NA	NA	NA	NA	NA
AVH82663.1|1254731_1256297_+	hypothetical protein	NA	A0A222ZGY6	Arthrobacter_phage	46.3	1.5e-61
ARB87929.1|1256290_1257478_+	hypothetical protein	NA	NA	NA	NA	NA
ARB87930.1|1257478_1258267_+	collagen-like triple helix repeat-containing protein	NA	NA	NA	NA	NA
ARB87931.1|1258263_1259079_-|integrase	integrase	integrase	A0A2P1CCU8	Gordonia_phage	46.5	1.2e-57
1262100:1262115	attR	GCGACGAGGTCTTCGA	NA	NA	NA	NA
>prophage 3
CP020410	Corynebacterium diphtheriae strain FDAARGOS_197 chromosome, complete genome	2489049	1994497	2057931	2489049	protease,portal,tail,head,terminase,capsid,integrase	Corynebacterium_phage(79.41%)	64	2019329:2019352	2058218:2058241
ARB88502.1|1994497_1995418_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
ARB88503.1|1995407_1996316_+	glycine/betaine ABC transporter	NA	NA	NA	NA	NA
ARB88504.1|1996336_1996774_-	hypothetical protein	NA	NA	NA	NA	NA
ARB88505.1|1996999_2000425_-	arabinosyltransferase	NA	NA	NA	NA	NA
ARB88506.1|2000417_2002418_-	hypothetical protein	NA	NA	NA	NA	NA
ARB88507.1|2002612_2003374_-	decaprenylphospho-beta-D-erythro-pentofuranosid- 2-ulose 2-reductase	NA	NA	NA	NA	NA
ARB88508.1|2003393_2004860_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
ARB88509.1|2004976_2005225_-	hypothetical protein	NA	NA	NA	NA	NA
ARB88510.1|2005253_2005688_+	hypothetical protein	NA	NA	NA	NA	NA
ARB88511.1|2005684_2006233_+	hypothetical protein	NA	NA	NA	NA	NA
ARB88512.1|2006244_2006664_+	GtrA family protein	NA	NA	NA	NA	NA
ARB88513.1|2006873_2007653_+	DUF559 domain-containing protein	NA	NA	NA	NA	NA
ARB88514.1|2007786_2008704_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
ARB88515.1|2008877_2009843_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
ARB88516.1|2009942_2010677_+	metal ABC transporter ATP-binding protein	NA	R4TX06	Phaeocystis_globosa_virus	26.3	1.8e-09
ARB88517.1|2010673_2011573_+	metal ABC transporter permease	NA	NA	NA	NA	NA
ARB88518.1|2011569_2012421_+	metal ABC transporter permease	NA	NA	NA	NA	NA
ARB88519.1|2012505_2013543_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
ARB88520.1|2013608_2014388_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.5	3.9e-10
ARB88521.1|2014406_2015312_-	ABC transporter permease	NA	NA	NA	NA	NA
ARB88522.1|2015402_2016596_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
ARB88523.1|2016592_2017540_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
ARB88524.1|2017896_2018931_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	24.8	5.4e-15
ARB88525.1|2019274_2019469_+	hypothetical protein	NA	NA	NA	NA	NA
2019329:2019352	attL	CTCGAACTCAAGAACACGAAAACC	NA	NA	NA	NA
ARB88526.1|2019482_2019662_-	hypothetical protein	NA	NA	NA	NA	NA
ARB88527.1|2019695_2021270_+	carboxylate transporter	NA	NA	NA	NA	NA
ARB88528.1|2022869_2024096_-|integrase	site-specific integrase	integrase	A0A1W6JRD7	Corynebacterium_phage	90.9	5.3e-219
ARB88529.1|2024195_2025218_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
ARB88530.1|2025229_2025793_-	hypothetical protein	NA	NA	NA	NA	NA
ARB88531.1|2025887_2026295_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A1W6JRC2	Corynebacterium_phage	99.3	1.7e-73
ARB88532.1|2026908_2027151_+	XRE family transcriptional regulator	NA	A0A1W6JRC7	Corynebacterium_phage	98.7	1.6e-34
ARB88533.1|2027389_2027716_-	hypothetical protein	NA	NA	NA	NA	NA
ARB89025.1|2027748_2028129_-	hypothetical protein	NA	NA	NA	NA	NA
ARB88534.1|2028211_2029030_+	phage antirepressor Ant	NA	A0A1W6JRI1	Corynebacterium_phage	89.4	1.5e-137
ARB88535.1|2029049_2029250_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
ARB88536.1|2029246_2029489_+	hypothetical protein	NA	A0A1W6JRC8	Corynebacterium_phage	59.0	1.9e-19
ARB88537.1|2029500_2029725_+	hypothetical protein	NA	A0A1W6JRD0	Corynebacterium_phage	44.4	6.4e-06
ARB88538.1|2031420_2032629_+	hypothetical protein	NA	A0A220NQT1	Corynebacterium_phage	66.0	2.4e-131
ARB88539.1|2032621_2033236_+	hypothetical protein	NA	A0A1W6JRC6	Corynebacterium_phage	85.1	1.4e-90
ARB88540.1|2033287_2033605_+	HNH endonuclease	NA	A0A1W6JRD4	Corynebacterium_phage	100.0	1.4e-51
ARB88541.1|2033757_2034102_+	hypothetical protein	NA	A0A1W6JRH9	Corynebacterium_phage	50.5	3.5e-19
ARB88542.1|2034091_2035693_+|terminase	terminase	terminase	A0A1W6JRF6	Corynebacterium_phage	77.2	3.6e-159
ARB88543.1|2035705_2036956_+|portal	phage portal protein	portal	A0A1W6JRE1	Corynebacterium_phage	93.0	2.5e-224
ARB88544.1|2036952_2037996_+|head,protease	HK97 family phage prohead protease	head,protease	A0A1W6JRD9	Corynebacterium_phage	91.7	3.4e-182
ARB88545.1|2037992_2039243_+|capsid	phage major capsid protein	capsid	A0A1W6JRF1	Corynebacterium_phage	88.9	5.8e-205
ARB88546.1|2039242_2039443_+	hypothetical protein	NA	A0A1W6JRE2	Corynebacterium_phage	63.6	6.7e-15
ARB88547.1|2039464_2039947_+	hypothetical protein	NA	A0A1W6JRD8	Corynebacterium_phage	93.8	1.6e-83
ARB88548.1|2039943_2040306_+	hypothetical protein	NA	A0A1W6JRD5	Corynebacterium_phage	93.3	3.6e-59
ARB88549.1|2040298_2040565_+	hypothetical protein	NA	A0A1W6JRE6	Corynebacterium_phage	94.3	1.5e-38
ARB88550.1|2040554_2040932_+	hypothetical protein	NA	A0A1W6JRI9	Corynebacterium_phage	88.0	1.1e-58
ARB88551.1|2040960_2041908_+|tail	phage tail protein	tail	A0A1W6JRH0	Corynebacterium_phage	83.8	4.3e-152
ARB88552.1|2042005_2042383_+	hypothetical protein	NA	A0A1W6JRK1	Corynebacterium_phage	91.2	2.7e-57
ARB88553.1|2042544_2042754_+	hypothetical protein	NA	A0A1W6JRF2	Corynebacterium_phage	88.4	9.1e-31
ARB88554.1|2042766_2048409_+	hypothetical protein	NA	A0A1W6JRG1	Corynebacterium_phage	81.8	0.0e+00
ARB88555.1|2048418_2049171_+	hypothetical protein	NA	A0A1W6JRF0	Corynebacterium_phage	88.0	1.0e-127
ARB88556.1|2049171_2050032_+	hypothetical protein	NA	Q37921	Corynephage	99.7	5.2e-165
ARB88557.1|2050031_2051147_+	hypothetical protein	NA	Q37922	Corynephage	88.1	1.6e-150
ARB88558.1|2051146_2052574_+	hypothetical protein	NA	A0A1W6JRF8	Corynebacterium_phage	48.8	1.7e-43
ARB88559.1|2052573_2053248_+	hypothetical protein	NA	NA	NA	NA	NA
ARB89026.1|2053991_2054768_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2P1JY73	Gordonia_phage	54.1	9.8e-70
ARB88560.1|2054770_2055094_+	hypothetical protein	NA	NA	NA	NA	NA
ARB89027.1|2055099_2055564_+	hypothetical protein	NA	A0A1W6JRF4	Corynebacterium_phage	73.5	2.5e-57
ARB88561.1|2055560_2055899_+	hypothetical protein	NA	A0A1W6JRH1	Corynebacterium_phage	88.4	1.2e-48
ARB88562.1|2056248_2057931_+	toxin	NA	A7UH54	Corynephage	98.0	0.0e+00
2058218:2058241	attR	GGTTTTCGTGTTCTTGAGTTCGAG	NA	NA	NA	NA
