The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2752116	390484	439173	2752116	protease,transposase,tRNA	uncultured_Mediterranean_phage(14.29%)	42	NA	NA
AUW31891.1|390484_391732_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
AUW31892.1|391728_392826_+	peptide chain release factor 1	NA	W8EDB3	Pseudomonas_phage	39.7	7.5e-07
AUW31893.1|392825_393698_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AUW31894.1|393681_394494_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	NA	NA	NA	NA
AUW31895.1|394511_396485_+	GTP-binding protein	NA	NA	NA	NA	NA
AUW31896.1|396490_396742_-	ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	61.2	3.0e-20
AUW31897.1|396779_397310_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	41.1	2.2e-25
AUW31898.1|397306_397870_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
AUW31899.1|397970_399182_+	signal recognition particle-docking protein FtsY	NA	D6PHS7	uncultured_phage	32.3	2.6e-13
AUW31900.1|399178_399847_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	39.3	1.2e-31
AUW31901.1|399843_400749_+	ABC transporter permease	NA	NA	NA	NA	NA
AUW31902.1|400887_401745_+	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	39.9	2.5e-42
AUW31903.1|401741_402074_+	hypothetical protein	NA	NA	NA	NA	NA
AUW31904.1|402238_403318_+	mechanosensitive ion channel protein MscS	NA	NA	NA	NA	NA
AUW31905.1|403390_404716_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A173GFL6	Erwinia_phage	29.1	9.2e-44
AUW31906.1|404718_405261_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
AUW31907.1|405260_406214_-	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	36.2	7.2e-14
AUW31908.1|406220_406910_-	DUF484 domain-containing protein	NA	NA	NA	NA	NA
AUW31909.1|406906_407779_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
AUW31910.1|407975_408890_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AUW31911.1|408947_409682_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AUW31912.1|409694_409928_-	hypothetical protein	NA	NA	NA	NA	NA
AUW31913.1|410398_411592_+	porin	NA	NA	NA	NA	NA
AUW31914.1|411863_414611_+	PilZ domain-containing protein	NA	NA	NA	NA	NA
AUW31915.1|414689_415796_-	cellulase	NA	NA	NA	NA	NA
AUW31916.1|415830_416556_-	hypothetical protein	NA	NA	NA	NA	NA
AUW31917.1|416572_419110_-	cellulose synthase	NA	NA	NA	NA	NA
AUW31918.1|419106_419790_-	hypothetical protein	NA	NA	NA	NA	NA
AUW31919.1|419805_420705_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AUW31920.1|420723_421623_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AUW31921.1|421681_423367_-	cellulose synthase catalytic subunit (UDP-forming)	NA	M1I518	Acanthocystis_turfacea_Chlorella_virus	27.8	2.2e-21
AUW31922.1|423630_424638_-	sodium:proton exchanger	NA	NA	NA	NA	NA
AUW31923.1|424712_425432_+	hypothetical protein	NA	NA	NA	NA	NA
AUW31924.1|425511_427350_+	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	35.6	3.5e-57
AUW33920.1|427509_427713_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	60.6	2.1e-16
AUW33921.1|428107_429121_+	hypothetical protein	NA	NA	NA	NA	NA
AUW31925.1|431398_432922_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
AUW31926.1|432930_433716_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
AUW31927.1|434647_435454_+	peptidase C39	NA	NA	NA	NA	NA
AUW31928.1|435520_436252_+	hypothetical protein	NA	NA	NA	NA	NA
AUW31929.1|436296_437943_+	YaiO family outer membrane beta-barrel protein	NA	NA	NA	NA	NA
AUW31930.1|437958_439173_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
>prophage 2
CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2752116	504173	516711	2752116		Staphylococcus_phage(37.5%)	13	NA	NA
AUW31982.1|504173_505679_-	PDZ domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	23.1	4.0e-11
AUW31983.1|505865_506735_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	42.4	5.0e-14
AUW31984.1|506843_507398_-	hypothetical protein	NA	NA	NA	NA	NA
AUW31985.1|508440_509685_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	53.2	3.7e-95
AUW31986.1|509657_510179_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
AUW33930.1|510189_511299_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.6	5.5e-42
AUW31987.1|511271_511928_+	riboflavin synthase	NA	A0A1V0SE20	Indivirus	34.6	3.1e-16
AUW31988.1|511924_513058_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	35.7	1.9e-53
AUW31989.1|513050_513518_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	53.6	1.2e-33
AUW31990.1|513542_513986_+	transcription antitermination factor NusB	NA	NA	NA	NA	NA
AUW33931.1|514094_514658_+	sel1 repeat family protein	NA	NA	NA	NA	NA
AUW31991.1|514678_515011_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
AUW31992.1|515025_516711_-	2-polyprenylphenol 6-hydroxylase	NA	A0A2N9QVT9	Dishui_lake_phycodnavirus	27.9	3.8e-34
>prophage 3
CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2752116	904299	1006118	2752116	integrase,transposase	Lysinibacillus_phage(19.05%)	83	911830:911889	970800:972101
AUW32363.1|904299_905310_+|integrase	site-specific integrase	integrase	W6MYA3	Pseudomonas_phage	41.3	3.8e-66
AUW32364.1|905544_907905_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32365.1|907964_908186_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32366.1|911099_911777_-	hypothetical protein	NA	NA	NA	NA	NA
911830:911889	attL	GGCTCTTCGTCAGATTGAGTGGGTAGGGGGTAGAATGCTGTGGAGCGGTCGTGCCCTGAA	NA	NA	NA	NA
AUW32367.1|911902_913117_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW32368.1|913105_914299_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32369.1|914313_914637_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32370.1|914703_915306_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32371.1|917879_918770_+	hypothetical protein	NA	A0A2D1GQC1	Lysinibacillus_phage	25.1	7.9e-07
AUW32372.1|919524_920250_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32373.1|920251_920914_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32374.1|921373_921931_+	N-acetyltransferase	NA	NA	NA	NA	NA
AUW32375.1|922032_925545_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32376.1|925541_926453_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32377.1|927539_929276_+|integrase	integrase	integrase	NA	NA	NA	NA
AUW32378.1|931154_931940_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32379.1|932332_933388_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AUW32380.1|933553_934465_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AUW32381.1|934620_936315_+	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA	NA
AUW32382.1|936311_938717_+	DUF2309 domain-containing protein	NA	NA	NA	NA	NA
AUW32383.1|938803_939850_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32384.1|939887_940760_+	hypothetical protein	NA	NA	NA	NA	NA
AUW33953.1|940846_942532_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AUW32385.1|943099_943501_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	37.1	1.1e-16
AUW32386.1|944704_946807_-	glucan 1,4-alpha-glucosidase	NA	NA	NA	NA	NA
AUW33954.1|946803_947262_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AUW32387.1|947270_947927_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32388.1|947943_949608_-	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.7	5.8e-43
AUW32389.1|949729_950074_-	heavy metal transporter	NA	NA	NA	NA	NA
AUW32390.1|950113_950539_-	mercury transporter MerT	NA	NA	NA	NA	NA
AUW32391.1|950766_950988_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32392.1|950991_951465_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AUW33955.1|951396_951708_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32393.1|951697_953260_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	29.4	3.7e-44
AUW32394.1|953268_953649_-	IS66 family insertion sequence hypothetical protein	NA	S5VXZ8	Leptospira_phage	35.4	2.7e-12
AUW32395.1|953651_953948_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AUW32396.1|953994_954213_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32397.1|954196_955759_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	29.4	3.7e-44
AUW32398.1|955767_956148_-	IS66 family insertion sequence hypothetical protein	NA	S5VXZ8	Leptospira_phage	35.4	2.7e-12
AUW32399.1|956150_956447_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AUW32400.1|956702_957488_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
AUW32401.1|957496_959020_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
AUW32402.1|959538_960852_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32403.1|960913_961573_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32404.1|961895_962681_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
AUW32405.1|962689_964213_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
AUW32406.1|964515_965301_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
AUW32407.1|965309_966833_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
AUW32408.1|967064_967769_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32409.1|968007_969906_-	thiol:disulfide interchange protein	NA	NA	NA	NA	NA
AUW32410.1|969907_970537_-	disulfide isomerase	NA	NA	NA	NA	NA
AUW32411.1|970538_970781_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32412.1|970872_972087_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW32413.1|972539_972926_-	hypothetical protein	NA	NA	NA	NA	NA
970800:972101	attR	GGCTCTTCGTCAGATTGAGTGGGTAGGGGGTAGAATGCTGTGGAGCGGTCGTGCCCTGAATAGGAGTTAGCTGATGGTCCCTGAAGAGCTGTTTTCTCTCGCGTTAGGATTGGTTCCGCCGTGGTTGGTGGATCATGTGACTTTCACGGTGGAGGAGAAACGCCTGGATCTGCACATCAACTTTCCCAAAGGTAGTCGCTTTGCTTGCTCCGTCTGTGGTGAGGAGTGTCCGGTACATGATACCCGTGACCATACCTGGCGGCACATGGATTTCTTCCAGCATGAAGCCTATCTCCATGCCCGTGTACCTCGTGTGAAGTGCCAGGAGCATGGAGTGCATCAGATATCTGTTCCCTGGGCGCGGGAAGGCTCGCGTTTCACCCTGCTCTTTGAAGCGCTGATCATGACCCTGGTGCGGGAGATGCCGGTATTGACGGCAGCTCGCATGGTCGGTGAGACCGACAAGCTCCTGTGGCGAGTGATTGACCATTATGTGCCCGAAGCTCGTGCTGCGGTGGATATGGCCAATGTCCATGCCGTCGGCGTCGATGAAACCAGCAGTCGGCATGGACATGACTACATCACGCTCTTCGTGGATCTGAATGCCCGGCGACTCTTGTTCGCTACTCCCGGCAAGGATGCCAAGACCTTTGAGAAATTCTCCGCAGATCTACAGGCCCATGGTGGTAGCGCGGAAGCGATCACCGATGTGAGCATGGACCTCTCGCCGGCCTTCCAGAAAGGGGCTGCCGAGCACCTGCCCAATGCGGAGATCACTTTCGATCGTTTTCACCTCATGAAGCTCGTCAACGAGGCCGTAGACGACGTGCGCAAGGGGGAAGTCCTCACCCAGCCAAATCTCAAAAAGACCCGCTGGCTTTGGCTCAAGAACGATTGCAACCTCAAAATGAAGCAGAAAGAAAAGCTGCAGGAATTGCTCAAAGACCAGAACCTCAAGACGGCGCAGGCCTACCAGTTCCGCCTGACCTTTCAGGACATCTTCACGATCAAGAATCGCCACCAGGGGGCTACCCTCTTGAAAGCCTGGTTGGAAAACGCCAGAACCAGCGATCTGCCGCCTATCGTCAGGGTCGCCTACACCATCATGAATCACTGGGATGGCGTGCTCCGATGGTTCGAGAGCCAGATCACCAATGGAATTCTGGAAGGTTTCAACAGCCTCATTCAATCCGCCAAGGCCAAGGCTCGGGGTTACCGCACGCACAAGAACTTTATCAACATGGCCTACCTGATCCTGGGCAAGCTGGATCTCAGGCTACCCACTTGAAATGACGAGGAACC	NA	NA	NA	NA
AUW32414.1|972985_974203_+|transposase	ISL3-like element ISAtc2 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	23.2	6.4e-07
AUW32415.1|974160_974454_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32416.1|974444_975158_-	DUF2063 domain-containing protein	NA	NA	NA	NA	NA
AUW32417.1|975150_976035_-	DUF692 domain-containing protein	NA	NA	NA	NA	NA
AUW32418.1|976139_976427_-	DUF2282 domain-containing protein	NA	NA	NA	NA	NA
AUW32419.1|976507_976975_-	DoxX family protein	NA	NA	NA	NA	NA
AUW32420.1|976985_977267_-	DUF2282 domain-containing protein	NA	NA	NA	NA	NA
AUW32421.1|977375_978485_-	ABC-2 transporter permease	NA	NA	NA	NA	NA
AUW32422.1|978484_979600_-	ABC transporter permease	NA	NA	NA	NA	NA
AUW32423.1|979596_981339_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.2	6.5e-21
AUW32424.1|981328_982363_-	hemolysin D	NA	NA	NA	NA	NA
AUW32425.1|982389_984711_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32426.1|985084_985378_-	DUF2282 domain-containing protein	NA	NA	NA	NA	NA
AUW32427.1|985444_985840_-	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
AUW32428.1|985844_987155_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32429.1|987129_987426_-	glutaredoxin	NA	NA	NA	NA	NA
AUW33956.1|987950_989306_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	47.4	6.1e-75
AUW32430.1|991928_992921_-	2-hydroxyacid dehydrogenase	NA	M1HMI7	Paramecium_bursaria_Chlorella_virus	41.4	2.5e-62
AUW32431.1|993585_995991_-	DUF2309 domain-containing protein	NA	NA	NA	NA	NA
AUW32432.1|995987_997682_-	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA	NA
AUW32433.1|997838_998837_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AUW32434.1|998913_1000191_-	PAS domain S-box protein	NA	A0A127AWB9	Bacillus_phage	30.5	3.9e-15
AUW32435.1|1000740_1001373_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AUW32436.1|1001388_1001991_-	NAD(P)H:quinone oxidoreductase	NA	NA	NA	NA	NA
AUW32437.1|1002118_1002457_+	transcriptional regulator	NA	NA	NA	NA	NA
AUW32438.1|1002639_1002852_+	RNA helicase	NA	NA	NA	NA	NA
AUW32439.1|1002987_1003233_+	restriction endonuclease	NA	NA	NA	NA	NA
AUW32440.1|1004852_1004993_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
AUW33957.1|1005098_1006118_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2752116	1032148	1078905	2752116	transposase	Lysinibacillus_phage(27.78%)	43	NA	NA
AUW32462.1|1032148_1033363_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW32463.1|1033405_1034806_-	NarK/NasA family nitrate transporter	NA	NA	NA	NA	NA
AUW32464.1|1035097_1036267_-	nitrate transporter	NA	NA	NA	NA	NA
AUW32465.1|1036475_1037039_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32466.1|1039231_1039579_+	hypothetical protein	NA	A0A2H4PDG5	Mycobacterium_phage	34.8	2.9e-05
AUW32467.1|1039659_1041816_+	SAM-dependent DNA methyltransferase	NA	A0A220A2U4	Liberibacter_phage	25.3	1.2e-27
AUW32468.1|1041812_1042448_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32469.1|1043569_1043938_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32470.1|1044119_1044494_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32471.1|1044965_1046180_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW32472.1|1046654_1047872_+|transposase	ISL3-like element ISAtc2 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	23.2	6.4e-07
AUW32473.1|1048852_1050067_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW32474.1|1050561_1052085_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
AUW32475.1|1052093_1052879_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
AUW32476.1|1054187_1055711_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
AUW32477.1|1055719_1056505_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
AUW32478.1|1056807_1058331_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
AUW32479.1|1058339_1059125_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
AUW32480.1|1059928_1060756_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32481.1|1060991_1061216_-	superinfection immunity protein	NA	A0A2D1GLY6	Salmonella_phage	50.9	1.7e-06
AUW33960.1|1061246_1061483_-	hypothetical protein	NA	NA	NA	NA	NA
AUW33961.1|1061503_1062364_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32482.1|1062379_1062595_-	hypothetical protein	NA	NA	NA	NA	NA
AUW33962.1|1062560_1063232_-	acyltransferase	NA	NA	NA	NA	NA
AUW32483.1|1063761_1065285_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
AUW32484.1|1065293_1066079_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
AUW32485.1|1066075_1066315_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32486.1|1066373_1066637_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
AUW33963.1|1066924_1067149_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32487.1|1067163_1067709_+	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA	NA
AUW32488.1|1067705_1068158_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32489.1|1068154_1071313_+	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
AUW32490.1|1071765_1071945_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32491.1|1071962_1072226_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32492.1|1072372_1072585_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32493.1|1073309_1074251_+	GTP-binding protein	NA	NA	NA	NA	NA
AUW32494.1|1074252_1075020_+	phosphatase	NA	K4K650	Caulobacter_phage	37.8	9.5e-33
AUW32495.1|1075242_1075587_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32496.1|1075632_1076139_+	single-stranded DNA-binding protein	NA	F8TUL2	EBPR_podovirus	53.2	1.3e-38
AUW32497.1|1076314_1076530_+	hypothetical protein	NA	NA	NA	NA	NA
AUW33964.1|1076604_1077138_+	uracil-DNA glycosylase	NA	NA	NA	NA	NA
AUW33965.1|1077252_1077564_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32498.1|1077690_1078905_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
>prophage 5
CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2752116	1498404	1590057	2752116	transposase	Lysinibacillus_phage(26.32%)	70	NA	NA
AUW32836.1|1498404_1499619_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW32837.1|1499830_1500754_+	motility protein MotB	NA	NA	NA	NA	NA
AUW32838.1|1500838_1502851_+	GGDEF-domain containing protein	NA	NA	NA	NA	NA
AUW32839.1|1503076_1504291_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW32840.1|1504732_1505947_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW34005.1|1506953_1507577_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32841.1|1508437_1509223_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
AUW32842.1|1509231_1510755_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
AUW32843.1|1512303_1512717_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32844.1|1512713_1513004_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32845.1|1513057_1513654_+	conjugal transfer protein	NA	NA	NA	NA	NA
AUW32846.1|1513725_1513923_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32847.1|1513924_1514542_+	peptidase M56	NA	NA	NA	NA	NA
AUW32848.1|1514513_1516850_-	conjugal transfer protein TraG	NA	NA	NA	NA	NA
AUW32849.1|1516937_1517759_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32850.1|1517761_1518202_-	hypothetical protein	NA	B5WZU7	Pseudomonas_phage	41.5	6.2e-21
AUW34006.1|1521030_1522050_+|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AUW32851.1|1522958_1526075_-	multidrug efflux protein	NA	NA	NA	NA	NA
AUW32852.1|1526099_1527182_-	MexH family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AUW32853.1|1528722_1528974_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32854.1|1530162_1530879_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	33.5	1.6e-29
AUW34007.1|1530908_1532195_+	histidine kinase	NA	NA	NA	NA	NA
AUW32855.1|1533280_1534543_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	45.3	1.4e-89
AUW32856.1|1534591_1535275_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32857.1|1535288_1536374_+	quinol oxidase	NA	NA	NA	NA	NA
AUW32858.1|1536496_1537543_-|transposase	IS630 family transposase	transposase	A0A1V0SCG6	Indivirus	25.1	8.7e-13
AUW32859.1|1537765_1538179_-	sel1 repeat family protein	NA	NA	NA	NA	NA
AUW32860.1|1540704_1541322_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32861.1|1541841_1542456_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32862.1|1542866_1544333_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AUW32863.1|1544410_1545505_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AUW32864.1|1545644_1545971_+	DUF202 domain-containing protein	NA	NA	NA	NA	NA
AUW32865.1|1546101_1548966_+	formate dehydrogenase	NA	NA	NA	NA	NA
AUW32866.1|1549026_1549719_+	ferredoxin	NA	A0A077SL61	Escherichia_phage	39.3	9.8e-29
AUW34008.1|1550536_1551205_+	ferredoxin	NA	A0A077SL61	Escherichia_phage	40.0	4.0e-27
AUW32867.1|1551220_1552159_+	dimethyl sulfoxide reductase	NA	NA	NA	NA	NA
AUW32868.1|1552186_1552894_+	nucleoside-diphosphate sugar epimerase	NA	NA	NA	NA	NA
AUW32869.1|1552886_1553204_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34009.1|1553251_1553581_+	DUF202 domain-containing protein	NA	NA	NA	NA	NA
AUW32870.1|1553600_1553927_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32871.1|1553986_1554313_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32872.1|1554309_1555308_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
AUW32873.1|1555405_1555615_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32874.1|1555937_1556234_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AUW32875.1|1556236_1556617_+	IS66 family insertion sequence hypothetical protein	NA	S5VXZ8	Leptospira_phage	35.4	2.7e-12
AUW32876.1|1556625_1558188_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	29.4	3.7e-44
AUW34010.1|1558177_1558489_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32877.1|1563398_1563800_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32878.1|1565078_1565753_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32879.1|1566100_1566361_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34011.1|1566585_1567041_-	hypothetical protein	NA	A0A1P8CWQ1	Bacillus_phage	43.8	9.9e-14
AUW32880.1|1567193_1567640_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32881.1|1567636_1567843_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32882.1|1568397_1568754_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34012.1|1569539_1570559_-|transposase	IS5/IS1182 family transposase	transposase	NA	NA	NA	NA
AUW32883.1|1571368_1573012_-	glucans biosynthesis glucosyltransferase MdoH	NA	NA	NA	NA	NA
AUW32884.1|1572998_1573655_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32885.1|1576217_1577207_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32886.1|1578241_1579456_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW32887.1|1579793_1580156_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34013.1|1580298_1580712_+	hypothetical protein	NA	NA	NA	NA	NA
AUW32888.1|1580863_1581763_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AUW32889.1|1581781_1582681_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AUW32890.1|1583285_1584254_-|transposase	IS5/IS1182 family transposase	transposase	Q38213	Escherichia_phage	48.0	8.2e-74
AUW34014.1|1584447_1584759_-	hypothetical protein	NA	NA	NA	NA	NA
AUW32891.1|1584748_1586311_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	29.4	3.7e-44
AUW32892.1|1586319_1586700_-	IS66 family insertion sequence hypothetical protein	NA	S5VXZ8	Leptospira_phage	35.4	2.7e-12
AUW32893.1|1586702_1586999_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AUW32894.1|1587222_1588758_-	amino acid transporter	NA	NA	NA	NA	NA
AUW32895.1|1588842_1590057_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
>prophage 6
CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2752116	1725595	1779203	2752116	protease,transposase,tRNA	Lysinibacillus_phage(25.0%)	46	NA	NA
AUW32998.1|1725595_1726345_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AUW34029.1|1726349_1727132_-	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
AUW32999.1|1727170_1728478_+	2-octaprenyl-6-methoxyphenyl hydroxylase	NA	NA	NA	NA	NA
AUW34030.1|1728464_1729652_+	2-octaprenyl-6-methoxyphenyl hydroxylase	NA	NA	NA	NA	NA
AUW33000.1|1729662_1729938_+	hypothetical protein	NA	NA	NA	NA	NA
AUW33001.1|1729941_1731462_+|protease	ATP-dependent protease	protease	NA	NA	NA	NA
AUW33002.1|1731477_1732131_+	DUF202 domain-containing protein	NA	NA	NA	NA	NA
AUW33003.1|1732142_1732892_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
AUW33004.1|1732888_1733551_-	phosphatidylserine decarboxylase family protein	NA	NA	NA	NA	NA
AUW33005.1|1733668_1734685_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
AUW33006.1|1734727_1735222_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
AUW33007.1|1735223_1736966_-	acetolactate synthase, large subunit, biosynthetic type	NA	E5EQ70	Micromonas_sp._RCC1109_virus	32.5	1.9e-60
AUW33008.1|1737104_1738649_-	DNA mismatch repair protein MutS	NA	F2Y0V3	Organic_Lake_phycodnavirus	25.3	2.4e-11
AUW33009.1|1738658_1739084_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34031.1|1739099_1739534_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34032.1|1739542_1740079_-	nucleoside deaminase	NA	NA	NA	NA	NA
AUW33010.1|1740295_1741342_+	pilus assembly protein PilM	NA	NA	NA	NA	NA
AUW33011.1|1741338_1741926_+	pilus assembly protein PilN	NA	NA	NA	NA	NA
AUW33012.1|1741922_1742561_+	pilus assembly protein PilO	NA	NA	NA	NA	NA
AUW33013.1|1742557_1743100_+	pilus assembly protein PilP	NA	NA	NA	NA	NA
AUW33014.1|1743137_1745456_+	type IV pilus secretin PilQ	NA	R9TEZ5	Vibrio_phage	26.0	1.5e-17
AUW33015.1|1745458_1746007_+	shikimate kinase	NA	NA	NA	NA	NA
AUW33016.1|1746079_1747165_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
AUW33017.1|1747166_1747994_+	thymidylate synthase (FAD)	NA	A0A1C9C5C1	Heterosigma_akashiwo_virus	29.1	1.1e-23
AUW33018.1|1747990_1749166_+	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA	NA
AUW33019.1|1749400_1753816_+	glutamate synthase large subunit	NA	NA	NA	NA	NA
AUW33020.1|1753848_1755243_+	glutamate synthase small subunit	NA	NA	NA	NA	NA
AUW33021.1|1755245_1756307_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
AUW34033.1|1756455_1757235_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AUW33022.1|1757366_1758146_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AUW33023.1|1758328_1759618_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.7	5.8e-67
AUW33024.1|1759639_1760854_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
AUW33025.1|1760850_1761726_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
AUW33026.1|1761722_1762886_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AUW33027.1|1762901_1764182_-	GTPase HflX	NA	NA	NA	NA	NA
AUW33028.1|1764220_1764487_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
AUW33029.1|1764766_1767559_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AUW33030.1|1767563_1768133_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AUW34034.1|1770254_1770497_-	DUF4168 domain-containing protein	NA	NA	NA	NA	NA
AUW33031.1|1771295_1772510_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW34035.1|1772523_1772913_-	DedA family protein	NA	NA	NA	NA	NA
AUW33032.1|1773753_1774968_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW33033.1|1774971_1775493_-	hypothetical protein	NA	NA	NA	NA	NA
AUW33034.1|1775825_1776317_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34036.1|1777339_1777651_-	hypothetical protein	NA	NA	NA	NA	NA
AUW33035.1|1777640_1779203_-|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	29.4	3.7e-44
>prophage 7
CP026328	Acidithiobacillus caldus strain MTH-04 chromosome, complete genome	2752116	2026611	2100601	2752116	transposase,tRNA	uncultured_virus(14.29%)	59	NA	NA
AUW33246.1|2026611_2027874_-|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	45.3	1.4e-89
AUW33247.1|2029044_2029329_-	hypothetical protein	NA	NA	NA	NA	NA
AUW33248.1|2029391_2030477_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AUW33249.1|2030541_2032008_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AUW33250.1|2032570_2033098_+	hypothetical protein	NA	NA	NA	NA	NA
AUW33251.1|2033202_2034312_-	ABC-2 transporter permease	NA	NA	NA	NA	NA
AUW33252.1|2034311_2035427_-	ABC transporter permease	NA	NA	NA	NA	NA
AUW33253.1|2035423_2037202_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.5	3.9e-21
AUW33254.1|2037520_2038738_-|transposase	ISL3-like element ISAtc2 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	23.2	6.4e-07
AUW34060.1|2039699_2041193_-	MFS transporter	NA	NA	NA	NA	NA
AUW33255.1|2041255_2041684_-	universal stress protein	NA	NA	NA	NA	NA
AUW33256.1|2041819_2043202_+	APC family permease	NA	NA	NA	NA	NA
AUW33257.1|2043274_2047150_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	49.7	1.5e-94
AUW33258.1|2047156_2047876_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	41.0	4.1e-46
AUW33259.1|2047872_2049180_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	34.4	2.4e-20
AUW33260.1|2049176_2050334_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
AUW33261.1|2050336_2051251_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
AUW33262.1|2052122_2052893_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AUW33263.1|2052998_2053289_+	co-chaperone GroES	NA	A0A221S322	uncultured_virus	48.9	3.8e-19
AUW33264.1|2053338_2054988_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	61.7	3.9e-177
AUW33265.1|2055117_2055720_+	adenine phosphoribosyltransferase	NA	NA	NA	NA	NA
AUW33266.1|2055706_2057404_+	adenylyl-sulfate kinase	NA	A0A2K9L0F0	Tupanvirus	33.6	2.2e-90
AUW33267.1|2057387_2058938_+	DUF814 domain-containing protein	NA	A0A1J0F9J4	Only_Syngen_Nebraska_virus	30.8	2.4e-06
AUW33268.1|2058959_2060141_-	c-type cytochrome biogenesis protein CcsB	NA	NA	NA	NA	NA
AUW33269.1|2060210_2061077_-	sulfur oxidation c-type cytochrome SoxA	NA	NA	NA	NA	NA
AUW34061.1|2061108_2061336_-	hypothetical protein	NA	NA	NA	NA	NA
AUW33270.1|2061494_2063345_-	cytochrome c biogenesis protein ResB	NA	NA	NA	NA	NA
AUW33271.1|2063337_2064096_-	hypothetical protein	NA	NA	NA	NA	NA
AUW33272.1|2064106_2065816_-	thiosulfohydrolase SoxB	NA	NA	NA	NA	NA
AUW33273.1|2065871_2066201_-	thiosulfate oxidation carrier complex protein SoxZ	NA	NA	NA	NA	NA
AUW33274.1|2066250_2066760_-	thiosulfate oxidation carrier protein SoxY	NA	NA	NA	NA	NA
AUW33275.1|2067653_2068019_-	hypothetical protein	NA	NA	NA	NA	NA
AUW33276.1|2068015_2068651_-	cytochrome O ubiquinol oxidase	NA	NA	NA	NA	NA
AUW33277.1|2068720_2070859_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AUW33278.1|2070882_2071851_-	cytochrome ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AUW33279.1|2073563_2074349_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
AUW33280.1|2074357_2075881_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
AUW33281.1|2076183_2076969_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	1.7e-32
AUW33282.1|2076977_2078501_-|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	29.9	6.3e-28
AUW33283.1|2078920_2079430_+	hypothetical protein	NA	NA	NA	NA	NA
AUW33284.1|2079497_2080931_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
AUW33285.1|2080927_2082400_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
AUW33286.1|2082416_2082710_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
AUW33287.1|2082734_2083520_-	VacJ family lipoprotein	NA	NA	NA	NA	NA
AUW33288.1|2083516_2084191_-	hypothetical protein	NA	NA	NA	NA	NA
AUW33289.1|2084240_2085344_-	hopanoid biosynthesis associated radical SAM protein HpnH	NA	NA	NA	NA	NA
AUW33290.1|2085429_2086275_-	hypothetical protein	NA	NA	NA	NA	NA
AUW33291.1|2086271_2087288_-	hypothetical protein	NA	NA	NA	NA	NA
AUW33292.1|2087292_2089995_-	hypothetical protein	NA	NA	NA	NA	NA
AUW33293.1|2089996_2090881_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
AUW33294.1|2090877_2092305_-	hopanoid biosynthesis associated radical SAM protein HpnJ	NA	NA	NA	NA	NA
AUW33295.1|2092301_2093465_-	glycosyl transferase	NA	NA	NA	NA	NA
AUW33296.1|2093467_2094451_-	NAD-dependent dehydratase	NA	NA	NA	NA	NA
AUW33297.1|2094447_2095155_-	5'-methylthioadenosine nucleosidase	NA	NA	NA	NA	NA
AUW33298.1|2095145_2097092_-	squalene--hopene cyclase	NA	NA	NA	NA	NA
AUW33299.1|2097088_2098132_-	phytoene/squalene synthase family protein	NA	NA	NA	NA	NA
AUW34062.1|2098401_2098701_+	hypothetical protein	NA	NA	NA	NA	NA
AUW33300.1|2098724_2099624_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
AUW33301.1|2099701_2100601_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 1
CP026329	Acidithiobacillus caldus strain MTH-04 plasmid p1, complete sequence	190798	16	73188	190798	integrase,transposase,protease	Lysinibacillus_phage(19.05%)	56	21038:21097	71958:73262
AUW34248.1|16_1369_+|transposase	transposase	transposase	NA	NA	NA	NA
AUW34106.1|1793_2501_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AUW34107.1|2516_2915_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AUW34249.1|2953_3718_+	energy transducer TonB	NA	NA	NA	NA	NA
AUW34108.1|3742_5125_+	allantoin permease	NA	NA	NA	NA	NA
AUW34109.1|5121_6363_+	guanine deaminase	NA	NA	NA	NA	NA
AUW34110.1|6371_7325_+	adenosine deaminase	NA	NA	NA	NA	NA
AUW34111.1|7372_8587_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW34112.1|8588_9605_+	phosphorylase	NA	NA	NA	NA	NA
AUW34113.1|14531_14933_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34114.1|15271_16315_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34115.1|17592_17787_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34116.1|17859_19122_+|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	45.3	1.4e-89
AUW34117.1|19998_21096_+	hypothetical protein	NA	NA	NA	NA	NA
21038:21097	attL	ATGGTTCCTCGTCATTTCAAGTGGGTAGCCTGAGATCCAGCTTGCCCAGGATCAGGTAGG	NA	NA	NA	NA
AUW34118.1|21053_22268_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW34119.1|23701_24685_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AUW34120.1|25131_27378_+	xanthine dehydrogenase	NA	A0A0P0I429	Acinetobacter_phage	29.0	2.2e-69
AUW34121.1|27377_27833_+	(2Fe-2S)-binding protein	NA	A0A0P0IVM8	Acinetobacter_phage	31.9	7.6e-14
AUW34122.1|27829_28681_+	xanthine dehydrogenase family protein subunit M	NA	A0A0P0IVM8	Acinetobacter_phage	28.2	3.9e-19
AUW34123.1|28840_30055_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
AUW34124.1|30090_30588_+	ureidoglycolate hydrolase	NA	NA	NA	NA	NA
AUW34125.1|30597_31680_+	ring-opening amidohydrolase	NA	NA	NA	NA	NA
AUW34126.1|31679_32639_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34127.1|32613_32811_+	DUF4089 domain-containing protein	NA	NA	NA	NA	NA
AUW34250.1|32832_34206_+	AtzE family amidohydrolase	NA	NA	NA	NA	NA
AUW34128.1|34217_34604_+	DUF3225 domain-containing protein	NA	NA	NA	NA	NA
AUW34129.1|34607_35219_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34130.1|35215_36832_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AUW34131.1|36823_37744_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AUW34132.1|38323_39610_+|transposase	IS5/IS1182 family transposase	transposase	Q38213	Escherichia_phage	29.7	2.9e-10
AUW34133.1|40478_40982_-|protease	SOS-response repressor and protease LexA	protease	A0A218MND2	uncultured_virus	39.5	4.0e-16
AUW34134.1|40966_41236_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34135.1|41240_41525_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34136.1|41798_42731_+|integrase	integrase	integrase	A7XX23	Thermus_virus	28.9	7.7e-13
AUW34137.1|43323_43599_+	HU family DNA-binding protein	NA	B5TA87	Burkholderia_phage	46.7	3.5e-14
AUW34251.1|43870_44146_+	HU family DNA-binding protein	NA	B5TA87	Burkholderia_phage	46.7	3.5e-14
AUW34138.1|44157_44520_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34139.1|44610_44922_+	integration host factor subunit alpha	NA	G8GWC6	Rhodobacter_phage	33.3	2.0e-05
AUW34140.1|45150_45441_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34252.1|45437_45722_+	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA	NA
AUW34141.1|45998_46595_-	uracil-DNA glycosylase	NA	A0A218MKQ4	uncultured_virus	40.6	1.0e-10
AUW34142.1|46591_46825_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34143.1|47612_47945_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34144.1|47996_49043_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.9	3.2e-39
AUW34145.1|49577_49772_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34146.1|51401_53441_+	ATP-dependent helicase	NA	S5MMD7	Bacillus_phage	23.8	1.5e-29
AUW34147.1|54340_55483_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34253.1|55494_57714_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
AUW34148.1|57774_58086_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
AUW34149.1|58129_58546_+	N-acetyltransferase	NA	NA	NA	NA	NA
AUW34254.1|63104_64559_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34150.1|64940_65696_-	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	54.6	1.5e-67
AUW34151.1|65707_67222_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	49.0	3.2e-133
AUW34152.1|67347_68853_+|integrase	integrase	integrase	A0A059NT83	Lactococcus_phage	25.5	2.0e-18
AUW34153.1|68842_69574_+	ATPase	NA	A0A2L1IVB6	Escherichia_phage	41.1	2.7e-37
AUW34154.1|71973_73188_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	26.8	1.8e-09
71958:73262	attR	ATGGTTCCTCGTCATTTCAAGTGGGTAGCCTGAGATCCAGCTTGCCCAGGATCAGGTAGGCCATGTTGATAAAGTTCTTGTGCGTGCGGTAACCCCGAGCCTTGGCCTTGGCGGATTGAATGAGGCTGTTGAAACCTTCCAGAATTCCATTGGTGATCTGGCTCTCGAACCATCGGAGCACGCCATCCCAGTGATTCATGATGGTGTAGGCGACCCTGACGATAGGCGGCAGATCGCTGGTTCTGGCGTTTTCCAACCAGGCTTTCAAGAGGGTAGCCCCCTGGTGGCGATTCTTGATCGTGAAGATGTCCTGAAAGGTCAGGCGGAACTGGTAGGCCTGCGCCGTCTTGAGGTTCTGGTCTTTGAGCAATTCCTGCAGCTTTTCTTTCTGCTTCATTTTGAGGTTGCAATCGTTCTTGAGCCAAAGCCAGCGGGTCTTTTTGAGATTTGGCTGGGTGAGGACTTCCCCCTTGCGCACGTCGTCTACGGCCTCGTTGACGAGCTTCATGAGGTGAAAACGATCGAAAGTGATCTCCGCATTGGGCAGGTGCTCGGCAGCCCCTTTCTGGAAGGCCGGCGAGAGGTCCATGCTCACATCGGTGATCGCTTCCGCGCTACCACCATGGGCCTGTAGATCTGCGGAGAATTTCTCAAAGGTCTTGGCATCCTTGCCGGGAGTAGCGAACAAGAGTCGCCGGGCATTCAGATCCACGAAGAGCGTGATGTAGTCATGTCCATGCCGACTGCTGGTTTCATCGACGCCGACGGCATGGACATTGGCCATATCCACCGCAGCACGAGCTTCGGGCACATAATGGTCAATCACTCGCCACAGGAGCTTGTCGGTCTCACCGACCATGCGAGCTGCCGTCAATACCGGCATCTCCCGCACCAGGGTCATGATCAGCGCTTCAAAGAGCAGGGTGAAACGCGAGCCTTCCCGCGCCCAGGGAACAGATATCTGATGCACTCCATGCTCCTGGCACTTCACACGAGGTACACGGGCATGGAGATAGGCTTCATGCTGGAAGAAATCCATGTGCCGCCAGGTATGGTCACGGGTATCATGTACCGGACACTCCTCACCACAGACGGAGCAAGCAAAGCGACTACCTTTGGGAAAGTTGATGTGCAGATCCAGGCGTTTCTCCTCCACCGTGAAAGTCACATGATCCACCAACCACGGCGGAACCAATCCTAACGCGAGAGAAAACAGCTCTTCAGGGACCATCAGCTAACTCCTATTCAGGGCACGACCGCTCCACAGCATTCTACCCCCTACCCACTCAATCTGACGAAGAGCCA	NA	NA	NA	NA
>prophage 2
CP026329	Acidithiobacillus caldus strain MTH-04 plasmid p1, complete sequence	190798	108110	188277	190798	transposase,protease	uncultured_Mediterranean_phage(15.79%)	58	NA	NA
AUW34259.1|108110_109631_-|transposase	transposase	transposase	A0A0H3UZK2	Geobacillus_virus	32.4	3.0e-62
AUW34194.1|109792_110092_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34195.1|111191_111590_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AUW34196.1|111659_112415_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AUW34197.1|113017_113557_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34198.1|114108_114894_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	35.0	1.5e-30
AUW34199.1|114902_116426_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	33.5	1.8e-46
AUW34200.1|117076_122371_+	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	22.7	2.9e-56
AUW34201.1|122367_125145_+	helicase SNF2	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	27.1	1.7e-39
AUW34202.1|125184_125406_+	prevent-host-death protein	NA	NA	NA	NA	NA
AUW34203.1|125405_125819_+	PIN domain-containing protein	NA	NA	NA	NA	NA
AUW34204.1|125815_129769_+	restriction endonuclease	NA	A0A1B1IUC6	uncultured_Mediterranean_phage	24.0	1.2e-43
AUW34205.1|129920_130703_+	HNH endonuclease	NA	NA	NA	NA	NA
AUW34206.1|131308_131488_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34207.1|131643_131892_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34208.1|131901_133665_-	DUF4942 domain-containing protein	NA	I1ZBH6	Salisaeta_icosahedral_phage	29.7	1.1e-07
AUW34209.1|133668_133956_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34210.1|134024_134309_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34211.1|134497_134773_+	HU family DNA-binding protein	NA	B5TA87	Burkholderia_phage	46.7	3.5e-14
AUW34212.1|135404_135731_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AUW34213.1|135721_136069_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	50.5	1.4e-20
AUW34214.1|137717_138044_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AUW34215.1|138034_138382_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	50.5	1.4e-20
AUW34216.1|139592_140252_-	maturase	NA	NA	NA	NA	NA
AUW34217.1|140313_141102_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	47.8	1.6e-59
AUW34218.1|141101_142343_-|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	31.4	2.1e-34
AUW34219.1|142394_143003_-	transcription elongation factor GreAB	NA	A0A0U4J920	Pseudomonas_phage	43.5	3.2e-23
AUW34220.1|143212_143437_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34260.1|147806_148010_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34221.1|148737_149721_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	47.2	2.3e-68
AUW34222.1|149765_151097_+	hypothetical protein	NA	M1HJ48	Acanthocystis_turfacea_Chlorella_virus	28.4	6.9e-23
AUW34223.1|151054_151507_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34224.1|160257_160749_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34225.1|161618_161966_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34226.1|162993_163269_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34227.1|163377_163773_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34228.1|165802_166084_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34229.1|166096_167236_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A2I7SAX5	Vibrio_phage	33.0	2.1e-20
AUW34230.1|167412_167685_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34231.1|167791_168208_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34232.1|168669_168957_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34233.1|169009_169234_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34234.1|169549_169807_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34261.1|170092_171112_+|transposase	IS5/IS1182 family transposase	transposase	Q38213	Escherichia_phage	28.2	1.6e-19
AUW34235.1|171377_171974_-	hypothetical protein	NA	NA	NA	NA	NA
AUW34236.1|171846_173022_-	ATP-binding protein	NA	NA	NA	NA	NA
AUW34237.1|173180_173678_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34238.1|173758_174154_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34239.1|174294_175350_+	ParA family protein	NA	A0A240F4U1	Ochrobactrum_phage	31.0	3.1e-10
AUW34240.1|175333_176350_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34241.1|177721_178849_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34242.1|178976_180014_+	ribonucleotide-diphosphate reductase subunit beta	NA	K4K678	Caulobacter_phage	30.0	1.9e-36
AUW34262.1|180125_180431_+	hypothetical protein	NA	NA	NA	NA	NA
AUW34263.1|180665_181100_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AUW34243.1|181234_181600_+	transcriptional regulator	NA	NA	NA	NA	NA
AUW34244.1|181599_182934_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AUW34245.1|186143_186821_-	DUF1275 domain-containing protein	NA	NA	NA	NA	NA
AUW34246.1|186945_188277_+|transposase	transposase	transposase	NA	NA	NA	NA
