The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP014028	Achromobacter xylosoxidans strain FDAARGOS_150, complete genome	6268754	2221189	2288723	6268754	tRNA,tail	Burkholderia_virus(19.05%)	58	NA	NA
AUZ18993.1|2221189_2221960_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
AMH05197.1|2221959_2222901_+	prolyl aminopeptidase	NA	NA	NA	NA	NA
AMH05198.1|2222911_2223112_+	thiamine biosynthesis protein ThiS	NA	NA	NA	NA	NA
AMH05199.1|2223362_2223680_+	hypothetical protein	NA	NA	NA	NA	NA
AMH05200.1|2223726_2224173_+	peptidoglycan-binding protein LysM	NA	G3MBQ1	Bacillus_virus	50.7	1.2e-06
AMH05201.1|2224351_2225758_-	signal recognition particle protein	NA	NA	NA	NA	NA
AMH05202.1|2225864_2226707_+	hypothetical protein	NA	NA	NA	NA	NA
AUZ18994.1|2227192_2227771_+	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	31.1	1.8e-07
AMH05203.1|2227788_2228409_+	glutathione S-transferase	NA	NA	NA	NA	NA
AMH07389.2|2228477_2230502_-	hypothetical protein	NA	NA	NA	NA	NA
AMH05204.1|2230690_2231650_-	hypothetical protein	NA	NA	NA	NA	NA
AMH05205.1|2231757_2232789_-	epimerase	NA	A0A2H4UUK0	Bodo_saltans_virus	27.2	5.2e-26
AUZ18995.1|2232794_2234270_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AMH05206.2|2234368_2235304_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AMH05207.1|2235433_2236792_-	heme transporter	NA	NA	NA	NA	NA
AMH05208.1|2236788_2238135_-	hemolysin D	NA	NA	NA	NA	NA
AMH05209.1|2238131_2240054_-	type I secretion system permease/ATPase	NA	A0A2R8FG22	Brazilian_cedratvirus	32.9	3.7e-17
AUZ20403.1|2240185_2240794_-	heme acquisition protein HasAp	NA	NA	NA	NA	NA
AUZ20404.1|2240933_2244101_-	heme transporter	NA	NA	NA	NA	NA
AUZ18996.1|2244347_2245703_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AMH05213.1|2245706_2245967_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AMH05214.1|2246101_2247121_-	siderophore-interacting protein	NA	NA	NA	NA	NA
AMH05215.1|2247193_2247700_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
AMH05216.1|2247891_2248731_-	transcriptional regulator	NA	NA	NA	NA	NA
AMH05217.1|2248987_2250004_+	2-dehydro-3-deoxygalactonokinase	NA	NA	NA	NA	NA
AMH05218.1|2250000_2250654_+	2-dehydro-3-deoxy-6-phosphogalactonate aldolase	NA	NA	NA	NA	NA
AMH05219.1|2250650_2251799_+	galactonate dehydratase	NA	Q6A202	Oenococcus_phage	37.0	3.3e-58
AMH05220.1|2251831_2253142_+	MFS transporter	NA	NA	NA	NA	NA
AMH05221.1|2253374_2254085_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	24.5	4.8e-07
AMH05222.1|2254081_2255470_+	DUF3526 domain-containing protein	NA	NA	NA	NA	NA
AUZ18997.1|2255480_2256941_+	ABC transporter permease	NA	NA	NA	NA	NA
AMH05223.1|2259168_2260368_-	MFS transporter	NA	NA	NA	NA	NA
AMH05224.1|2260805_2262695_-	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.4	1.2e-118
AMH05225.1|2262896_2264300_-	hypothetical protein	NA	NA	NA	NA	NA
AUZ18998.1|2264451_2265843_+	xanthine permease XanP	NA	H9YQ34	environmental_Halophage	48.9	1.8e-26
AUZ20405.1|2266326_2266626_-	hypothetical protein	NA	NA	NA	NA	NA
AMH05226.1|2266941_2267958_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	39.0	5.0e-66
AMH05227.1|2268157_2268439_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AMH05228.1|2268787_2269723_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA	NA
AMH05229.1|2269775_2270975_+	ABC transporter permease	NA	NA	NA	NA	NA
AUZ18999.1|2271005_2271824_+	SDR family NAD(P)-dependent oxidoreductase	NA	W8CYX9	Bacillus_phage	49.3	1.4e-10
AMH05230.1|2271842_2272772_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AMH05231.1|2272913_2273510_-|tail	phage tail protein	tail	C7BGD3	Burkholderia_phage	52.5	1.6e-48
AUZ19000.1|2273506_2273743_-	hypothetical protein	NA	NA	NA	NA	NA
AMH05232.1|2273723_2274089_-	hypothetical protein	NA	NA	NA	NA	NA
AMH07390.1|2274093_2277597_-	host specificity protein J	NA	A4JX16	Burkholderia_virus	45.4	1.7e-262
AMH05233.1|2277722_2278328_-|tail	tail assembly protein	tail	Q6JIL3	Burkholderia_virus	55.7	1.0e-50
AMH05234.1|2278324_2279104_-	hydrolase Nlp/P60	NA	Q3HQU3	Burkholderia_phage	47.3	1.5e-65
AMH05235.1|2279106_2279835_-|tail	phage minor tail protein L	tail	A4JX13	Burkholderia_virus	56.6	1.7e-68
AUZ19001.1|2279837_2282474_-	hypothetical protein	NA	A0A1B1IX43	uncultured_Mediterranean_phage	42.9	4.7e-15
AMH07391.2|2282479_2282824_-|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	48.6	8.5e-26
AUZ19002.1|2282820_2284107_-|tail	phage tail tape measure protein	tail	A0A1W6JP49	Morganella_phage	30.3	2.2e-13
AMH05240.2|2284164_2284455_-	DUF4035 domain-containing protein	NA	S4TND7	Salmonella_phage	48.2	2.7e-12
AMH05241.1|2284454_2284928_-|tail	phage tail protein	tail	A4JX08	Burkholderia_virus	44.4	1.4e-26
AUZ19003.1|2284933_2285401_-	hypothetical protein	NA	NA	NA	NA	NA
AUZ20406.1|2285651_2286221_-	hypothetical protein	NA	NA	NA	NA	NA
AUZ19004.1|2286595_2287213_+	LexA family transcriptional repressor	NA	NA	NA	NA	NA
AUZ19005.1|2287265_2288723_-	cell envelope protein	NA	M1IA53	Paramecium_bursaria_Chlorella_virus	35.6	1.4e-64
>prophage 2
CP014028	Achromobacter xylosoxidans strain FDAARGOS_150, complete genome	6268754	4729555	4739654	6268754	tail,integrase	Burkholderia_phage(71.43%)	12	4724563:4724578	4740320:4740335
4724563:4724578	attL	GCTGCGGCCGGCGATG	NA	NA	NA	NA
AMH06485.1|4729555_4730005_+	hypothetical protein	NA	A0A0N7IRF3	Acinetobacter_phage	36.5	1.1e-17
AUZ20462.1|4730001_4730190_+	hypothetical protein	NA	NA	NA	NA	NA
AUZ19818.1|4730182_4731856_+|tail	phage tail protein	tail	NA	NA	NA	NA
AMH06490.2|4731848_4732448_+	hypothetical protein	NA	NA	NA	NA	NA
AMH06491.1|4732457_4732757_+	hypothetical protein	NA	NA	NA	NA	NA
AMH06492.1|4732776_4733787_+	hypothetical protein	NA	A9YX04	Burkholderia_phage	50.3	4.8e-77
AUZ19819.1|4733821_4734565_+	hypothetical protein	NA	A9YX06	Burkholderia_phage	63.9	6.7e-84
AMH06493.1|4734573_4734927_+	hypothetical protein	NA	A9YX11	Burkholderia_phage	66.7	4.6e-35
AUZ19820.1|4734923_4736105_+	hypothetical protein	NA	A9YX12	Burkholderia_phage	62.6	9.8e-130
AMH06494.1|4736106_4736772_+	DUF2612 domain-containing protein	NA	A9YX13	Burkholderia_phage	60.6	1.2e-73
AUZ19821.1|4738278_4738629_+|tail	phage tail protein	tail	NA	NA	NA	NA
AUZ19822.1|4738631_4739654_-|integrase	integrase	integrase	A0A2H4JE37	uncultured_Caudovirales_phage	32.3	4.8e-24
4740320:4740335	attR	GCTGCGGCCGGCGATG	NA	NA	NA	NA
>prophage 3
CP014028	Achromobacter xylosoxidans strain FDAARGOS_150, complete genome	6268754	4746832	4758968	6268754	integrase	Pseudomonas_phage(55.56%)	17	4742416:4742430	4755755:4755769
4742416:4742430	attL	GTCGAGTTGCCCGGC	NA	NA	NA	NA
AMH06497.2|4746832_4747888_-|integrase	integrase	integrase	A0A1B0VP19	Pseudomonas_phage	26.6	3.6e-22
AMH06498.1|4747889_4748177_-	hypothetical protein	NA	NA	NA	NA	NA
AMH06499.2|4748173_4748887_-	hypothetical protein	NA	O03965	Myxococcus_phage	45.8	3.2e-51
AMH06500.1|4748879_4749923_-	hypothetical protein	NA	NA	NA	NA	NA
AMH06501.1|4749926_4750208_-	hypothetical protein	NA	K4JS57	Caulobacter_phage	34.9	4.8e-11
AMH06502.1|4750210_4750684_-	hypothetical protein	NA	NA	NA	NA	NA
AUZ19831.1|4750683_4751436_-	hypothetical protein	NA	H2BD37	Pseudomonas_phage	42.5	1.5e-19
AMH06503.2|4751432_4751798_-	hypothetical protein	NA	NA	NA	NA	NA
AMH06504.1|4751923_4752538_-	3'-5' exonuclease	NA	I3PUZ1	Vibrio_phage	50.5	5.8e-49
AUZ19832.1|4752553_4754338_-	recombinase RecF	NA	J7HXJ7	Pseudomonas_phage	37.3	4.2e-84
AMH06505.1|4754347_4755517_-	recombination-associated protein RdgC	NA	A0A218M310	Acidovorax_phage	33.0	5.8e-42
AMH06506.1|4756740_4756962_-	hypothetical protein	NA	NA	NA	NA	NA
4755755:4755769	attR	GCCGGGCAACTCGAC	NA	NA	NA	NA
AMH06507.1|4756977_4757781_-	hypothetical protein	NA	J7HXJ4	Pseudomonas_phage	51.0	1.7e-69
AMH06508.1|4757795_4757984_-	hypothetical protein	NA	NA	NA	NA	NA
AMH06509.1|4757980_4758265_-	hypothetical protein	NA	NA	NA	NA	NA
AMH06510.1|4758261_4758471_-	hypothetical protein	NA	NA	NA	NA	NA
AMH06511.1|4758467_4758968_-	hypothetical protein	NA	A0A0S3UG68	Pseudomonas_phage	49.7	8.6e-35
>prophage 4
CP014028	Achromobacter xylosoxidans strain FDAARGOS_150, complete genome	6268754	4778102	4788335	6268754	holin	uncultured_Mediterranean_phage(14.29%)	15	NA	NA
AMH06531.1|4778102_4778744_+	hypothetical protein	NA	A0A1B1ITG1	uncultured_Mediterranean_phage	35.2	5.5e-26
AMH06532.1|4778747_4779137_+	hypothetical protein	NA	NA	NA	NA	NA
AMH06533.1|4779138_4779672_+	hypothetical protein	NA	NA	NA	NA	NA
AMH06534.2|4779684_4780146_+	hypothetical protein	NA	NA	NA	NA	NA
AUZ19838.1|4780149_4781487_+	hypothetical protein	NA	A0A0B5A509	Achromobacter_phage	61.2	4.9e-61
AMH06536.1|4781483_4781894_+	hypothetical protein	NA	NA	NA	NA	NA
AMH07512.2|4781917_4782268_+	hypothetical protein	NA	E5E3W4	Burkholderia_phage	44.4	1.6e-16
AMH06537.1|4782269_4782578_+|holin	phage holin family protein	holin	A0A0U4J8T9	Pseudomonas_phage	46.2	7.9e-07
AMH06538.1|4782580_4784236_+	hypothetical protein	NA	A0A2R2Z356	Escherichia_phage	28.6	1.2e-51
AMH06539.1|4784238_4785408_+	hypothetical protein	NA	Q08J79	Stx2-converting_phage	38.4	2.0e-18
AMH06540.1|4785407_4785698_+	hypothetical protein	NA	NA	NA	NA	NA
AMH06541.1|4785698_4786343_+	hypothetical protein	NA	NA	NA	NA	NA
AUZ19839.1|4786364_4786652_+	hypothetical protein	NA	NA	NA	NA	NA
AMH06542.1|4786648_4787122_+	hypothetical protein	NA	NA	NA	NA	NA
AUZ19840.1|4787123_4788335_+	hypothetical protein	NA	A0A248SL32	Klebsiella_phage	34.0	1.3e-31
>prophage 5
CP014028	Achromobacter xylosoxidans strain FDAARGOS_150, complete genome	6268754	5653120	5661055	6268754	tRNA	Moraxella_phage(33.33%)	9	NA	NA
AMH06984.1|5653120_5653708_+	thymidylate synthase	NA	A0A1X9I5T8	Streptococcus_phage	36.8	9.2e-20
AUZ20113.1|5653741_5654116_-	thioredoxin	NA	V9SJ74	Achromobacter_phage	27.8	1.9e-10
AMH06985.1|5654313_5655336_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
AUZ20114.1|5655714_5656071_+	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA	NA
AMH06986.1|5656155_5657448_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.3	5.4e-65
AUZ20115.1|5657556_5658588_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.6	1.4e-92
AMH06987.1|5658657_5659299_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AUZ20116.1|5659487_5660246_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.6	1.5e-67
AUZ20500.1|5660365_5661055_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	45.2	2.1e-31
