The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	0	5410	2906671	tail	uncultured_Caudovirales_phage(25.0%)	8	NA	NA
AVD50782.1|389_1208_+|tail	phage tail family protein	tail	A0A2H4JAE4	uncultured_Caudovirales_phage	34.9	1.7e-40
AVD50783.1|1217_2354_+	hypothetical protein	NA	A8ATA9	Listeria_phage	28.7	7.1e-53
AVD50784.1|2343_2643_+	CCA-adding enzyme	NA	NA	NA	NA	NA
AVD50785.1|2657_3233_+	alpha-amylase	NA	NA	NA	NA	NA
AVD50786.1|3247_3727_+	hypothetical protein	NA	NA	NA	NA	NA
AVD50787.1|3723_4260_+	hypothetical protein	NA	NA	NA	NA	NA
AVD50788.1|4278_4701_+	hypothetical protein	NA	Q2I8E7	Bacillus_phage	47.1	8.6e-28
AVD50789.1|4681_5410_+	N-acetylmuramoyl-L-alanine amidase	NA	E5DV68	Deep-sea_thermophilic_phage	48.0	9.6e-35
>prophage 2
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	8808	10317	2906671		Klosneuvirus(100.0%)	1	NA	NA
AVD50792.1|8808_10317_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	34.0	1.3e-57
>prophage 3
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	23288	23993	2906671		Bacillus_virus(100.0%)	1	NA	NA
AVD50807.1|23288_23993_+	zinc ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.6	6.4e-20
>prophage 4
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	37624	45726	2906671	tRNA	Streptococcus_phage(25.0%)	7	NA	NA
AVD50819.1|37624_38506_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	47.6	1.5e-66
AVD50820.1|38550_38835_-	transition state regulator Abh	NA	A0A2I7SC16	Paenibacillus_phage	52.7	4.4e-12
AVD50821.1|38948_39806_+	glucose transporter GlcU	NA	NA	NA	NA	NA
AVD53531.1|39867_41136_+	DUF1254 domain-containing protein	NA	A0A1J0FA30	Only_Syngen_Nebraska_virus	25.4	2.4e-25
AVD50822.1|41283_42522_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
AVD50823.1|42799_43660_+	glucose transporter GlcU	NA	NA	NA	NA	NA
AVD50824.1|43728_45726_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SEZ7	Hokovirus	33.7	6.6e-102
>prophage 5
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	58655	59870	2906671		Bacillus_phage(100.0%)	1	NA	NA
AVD50833.1|58655_59870_+	DUF348 domain-containing protein	NA	A0A0S2SXZ8	Bacillus_phage	58.4	2.0e-24
>prophage 6
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	63746	66158	2906671		Klosneuvirus(50.0%)	3	NA	NA
AVD50839.1|63746_64565_+	pur operon repressor	NA	A0A1V0SKE5	Klosneuvirus	25.4	3.1e-05
AVD50840.1|64739_65417_+	HlyD family secretion protein	NA	NA	NA	NA	NA
AVD50841.1|65465_66158_+	macrolide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	7.2e-32
>prophage 7
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	69168	71549	2906671		Acanthamoeba_polyphaga_mimivirus(50.0%)	2	NA	NA
AVD50845.1|69168_70542_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A0G2Y8M0	Acanthamoeba_polyphaga_mimivirus	36.5	3.5e-30
AVD50846.1|70592_71549_+	ribose-phosphate pyrophosphokinase 1	NA	A0A2K9L2G2	Tupanvirus	35.5	3.3e-43
>prophage 8
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	81296	81629	2906671		Rhodobacter_phage(100.0%)	1	NA	NA
AVD50854.1|81296_81629_-	putative heavy metal-binding protein	NA	M4STD1	Rhodobacter_phage	43.5	5.7e-11
>prophage 9
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	92522	99728	2906671	tRNA	Tupanvirus(33.33%)	5	NA	NA
AVD50865.1|92522_94469_+|tRNA	bifunctional tRNA lysidine(34) synthetase TilS/hypoxanthine phosphoribosyltransferase	tRNA	A0A2K9L634	Tupanvirus	24.5	2.6e-10
AVD50866.1|94815_96891_+	cell division protein FtsH	NA	G8DDJ2	Micromonas_pusilla_virus	47.7	1.6e-111
AVD50867.1|97006_97786_+	type III pantothenate kinase	NA	NA	NA	NA	NA
AVD50868.1|97801_98686_+	redox-regulated molecular chaperone Hsp33	NA	NA	NA	NA	NA
AVD50869.1|98801_99728_+	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	69.2	2.7e-119
>prophage 10
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	103694	105191	2906671	tRNA	Catovirus(100.0%)	1	NA	NA
AVD50876.1|103694_105191_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	40.4	1.6e-92
>prophage 11
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	118759	121222	2906671	protease	Enterobacteria_phage(100.0%)	1	NA	NA
AVD50880.1|118759_121222_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpC	protease	H6X3M6	Enterobacteria_phage	38.8	3.9e-128
>prophage 12
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	127646	132547	2906671	tRNA	Moumouvirus(50.0%)	8	NA	NA
AVD50887.1|127646_129062_+|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	30.6	4.4e-52
AVD50888.1|129065_129476_+	Mini-ribonuclease 3	NA	NA	NA	NA	NA
AVD50889.1|129475_130231_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
AVD50890.1|130233_130746_+	NYN domain-containing protein	NA	NA	NA	NA	NA
AVD50891.1|130826_131432_+	RNA polymerase sporulation sigma factor SigH	NA	NA	NA	NA	NA
AVD50892.1|131535_131685_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
AVD50893.1|131704_131884_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AVD50894.1|132013_132547_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	32.1	2.0e-13
>prophage 13
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	136637	138956	2906671		Bacillus_phage(50.0%)	2	NA	NA
AVD50901.1|136637_137816_+	RNA-splicing ligase RtcB	NA	X2JMN6	Bacillus_phage	55.3	7.0e-120
AVD50902.1|137960_138956_+	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	27.6	6.3e-21
>prophage 14
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	146218	153549	2906671		uncultured_Mediterranean_phage(50.0%)	2	NA	NA
AVD50909.1|146218_149773_+	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	23.6	8.8e-49
AVD50910.1|149943_153549_+	DNA-directed RNA polymerase subunit beta'	NA	A0A076FGB9	Aureococcus_anophage	25.3	1.7e-55
>prophage 15
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	170184	194615	2906671	protease	Bacillus_phage(27.27%)	23	NA	NA
AVD50922.1|170184_171621_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	31.2	5.3e-53
AVD50923.1|171740_172553_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
AVD50924.1|172688_173192_+	N-acetyltransferase	NA	NA	NA	NA	NA
AVD50925.1|173228_173891_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
AVD53535.1|173878_174076_+	hypothetical protein	NA	NA	NA	NA	NA
AVD50926.1|174148_174991_-	competence protein ComEC	NA	Q0H255	Geobacillus_phage	63.1	3.3e-87
AVD50927.1|175007_175829_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
AVD50928.1|175944_176916_+	oxidoreductase	NA	NA	NA	NA	NA
AVD50929.1|176953_178054_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	39.2	5.0e-19
AVD50930.1|178344_180495_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	63.3	7.2e-264
AVD50931.1|180487_181039_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A0C5K925	Enterococcus_phage	60.8	3.3e-56
AVD50932.1|181182_181854_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
AVD50933.1|182018_182798_-	carbon-nitrogen hydrolase	NA	M1I0W4	Acanthocystis_turfacea_Chlorella_virus	25.5	2.7e-11
AVD50934.1|182887_183550_-	metal ABC transporter permease	NA	NA	NA	NA	NA
AVD50935.1|183546_184563_-	methionine import ATP-binding protein MetN 1	NA	G9BWD6	Planktothrix_phage	38.4	1.3e-29
AVD50936.1|184577_185399_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVD50937.1|185779_186961_+	aspartate aminotransferase	NA	NA	NA	NA	NA
AVD50938.1|187173_187887_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	41.0	2.0e-45
AVD50939.1|188071_189904_+	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	33.3	7.0e-34
AVD50940.1|189900_191223_+	transcriptional regulator	NA	NA	NA	NA	NA
AVD50941.1|191225_192065_+	hypothetical protein	NA	NA	NA	NA	NA
AVD50942.1|192184_193015_+	MBL fold metallo-hydrolase	NA	A0A0A0RVF5	Bacillus_phage	29.0	8.4e-19
AVD50943.1|193112_194615_+|protease	serine protease	protease	W5SAB9	Pithovirus	32.6	4.7e-12
>prophage 16
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	251498	252155	2906671		Synechococcus_phage(100.0%)	1	NA	NA
AVD50988.1|251498_252155_-	transaldolase	NA	A0A0E3HJ81	Synechococcus_phage	46.7	2.6e-47
>prophage 17
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	262244	263765	2906671		Lactobacillus_phage(100.0%)	1	NA	NA
AVD51002.1|262244_263765_+	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	31.9	5.3e-51
>prophage 18
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	276761	277682	2906671		Streptococcus_phage(100.0%)	1	NA	NA
AVD51018.1|276761_277682_-	YafY family transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	27.1	1.8e-06
>prophage 19
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	288699	292084	2906671		Equid_alphaherpesvirus(50.0%)	5	NA	NA
AVD51031.1|288699_289365_+	uracil-DNA glycosylase	NA	A0A076JX67	Equid_alphaherpesvirus	47.9	6.7e-51
AVD51032.1|289532_289832_+	hypothetical protein	NA	NA	NA	NA	NA
AVD51033.1|289828_290773_+	hypothetical protein	NA	NA	NA	NA	NA
AVD51034.1|290807_291257_+	hypothetical protein	NA	NA	NA	NA	NA
AVD51035.1|291400_292084_+	peptidase P60	NA	A7KUS1	Bacillus_phage	34.7	2.1e-07
>prophage 20
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	297094	297769	2906671		Planktothrix_phage(100.0%)	1	NA	NA
AVD51041.1|297094_297769_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.5	1.3e-33
>prophage 21
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	312421	315025	2906671		Hokovirus(100.0%)	1	NA	NA
AVD51055.1|312421_315025_-	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	31.4	2.5e-40
>prophage 22
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	319954	320254	2906671		Bacillus_virus(100.0%)	1	NA	NA
AVD51062.1|319954_320254_-	phage repressor protein	NA	G3MBF7	Bacillus_virus	63.4	1.4e-27
>prophage 23
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	366369	367317	2906671		Acidianus_two-tailed_virus(100.0%)	1	NA	NA
AVD51097.1|366369_367317_-	AAA family ATPase	NA	A0A1C9EGB9	Acidianus_two-tailed_virus	27.8	7.1e-06
>prophage 24
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	394874	396533	2906671		Bacillus_virus(50.0%)	2	NA	NA
AVD51125.1|394874_395603_+	NUDIX hydrolase	NA	G3MA14	Bacillus_virus	34.9	5.3e-25
AVD51126.1|395639_396533_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	24.0	2.1e-07
>prophage 25
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	406852	410277	2906671		Cyanophage(50.0%)	3	NA	NA
AVD51137.1|406852_407503_+	transaldolase	NA	A0A0C5AMY8	Cyanophage	30.1	3.3e-18
AVD51138.1|407610_409671_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AVD51139.1|409674_410277_+	phosphosugar isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	24.5	1.6e-14
>prophage 26
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	414625	415561	2906671		Hokovirus(100.0%)	1	NA	NA
AVD51146.1|414625_415561_+	ribose-phosphate pyrophosphokinase 2	NA	A0A1V0SHF7	Hokovirus	32.0	4.8e-39
>prophage 27
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	448658	449852	2906671		Mycobacterium_virus(100.0%)	1	NA	NA
AVD51175.1|448658_449852_+	penicillin-binding protein	NA	G1BSP8	Mycobacterium_virus	23.5	1.3e-09
>prophage 28
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	463312	464791	2906671		Acinetobacter_phage(100.0%)	1	NA	NA
AVD51191.1|463312_464791_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	38.9	1.2e-79
>prophage 29
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	470932	471250	2906671		Bodo_saltans_virus(100.0%)	1	NA	NA
AVD51198.1|470932_471250_-	phosphoribosyl-AMP cyclohydrolase	NA	A0A2H4UVM0	Bodo_saltans_virus	39.3	1.0e-12
>prophage 30
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	477967	480710	2906671		Streptococcus_phage(50.0%)	3	NA	NA
AVD51207.1|477967_478264_-	cysteine methyltransferase	NA	M1PFU9	Streptococcus_phage	32.0	5.8e-07
AVD51208.1|478340_479372_+	nucleoid-associated protein	NA	NA	NA	NA	NA
AVD51209.1|479414_480710_-	guanine permease	NA	A0A0R6PHV4	Moraxella_phage	32.4	4.8e-53
>prophage 31
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	486547	490147	2906671		Bacillus_phage(33.33%)	4	NA	NA
AVD51215.1|486547_486757_+	hypothetical protein	NA	A0A172JI00	Bacillus_phage	50.0	5.9e-14
AVD51216.1|486778_487435_+	phospholipase	NA	NA	NA	NA	NA
AVD51217.1|487465_488650_-	RlmI/RlmK family 23S rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	44.6	6.5e-81
AVD51218.1|488737_490147_-	invasion associated endopeptidase	NA	A0A1V0DZX6	Clostridioides_phage	50.0	1.1e-18
>prophage 32
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	498848	500252	2906671		Hokovirus(100.0%)	1	NA	NA
AVD51224.1|498848_500252_+	deoxyribodipyrimidine photo-lyase	NA	A0A1V0SGL1	Hokovirus	33.8	4.2e-63
>prophage 33
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	506199	507477	2906671		Pandoravirus(100.0%)	1	NA	NA
AVD51229.1|506199_507477_-	O-acetylhomoserine aminocarboxypropyltransferase	NA	A0A0B5JD48	Pandoravirus	26.7	3.1e-12
>prophage 34
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	515640	519167	2906671		Bacillus_phage(100.0%)	2	NA	NA
AVD53552.1|515640_517353_+	multidrug ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.5	2.6e-46
AVD51240.1|517349_519167_+	ABC transporter	NA	W8CYL7	Bacillus_phage	28.9	6.3e-59
>prophage 35
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	522802	530071	2906671		Megavirus(25.0%)	9	NA	NA
AVD51245.1|522802_523744_+	NADPH:quinone reductase	NA	A0A2P1EIJ9	Megavirus	25.2	3.2e-06
AVD51246.1|523838_524372_+	N-acetyltransferase	NA	NA	NA	NA	NA
AVD51247.1|524368_524611_-	hypothetical protein	NA	NA	NA	NA	NA
AVD51248.1|524717_526469_+	glycerophosphodiester phosphodiesterase	NA	M1HJV8	Acanthocystis_turfacea_Chlorella_virus	25.8	1.0e-10
AVD51249.1|526507_527002_-	DUF5067 domain-containing protein	NA	NA	NA	NA	NA
AVD51250.1|527081_528224_-	serine/threonine protein kinase	NA	G9BWE0	Planktothrix_phage	30.6	5.9e-15
AVD51251.1|528330_528786_+	hypothetical protein	NA	NA	NA	NA	NA
AVD51252.1|528841_529234_+	DUF1398 domain-containing protein	NA	NA	NA	NA	NA
AVD51253.1|529330_530071_+	sulfite exporter TauE/SafE family protein	NA	Q6A1Z9	Oenococcus_phage	30.4	2.9e-15
>prophage 36
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	545525	550882	2906671		Streptococcus_phage(66.67%)	4	NA	NA
AVD51269.1|545525_547406_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	38.1	8.3e-107
AVD51270.1|547500_548229_+	hypothetical protein	NA	NA	NA	NA	NA
AVD51271.1|548368_549019_+	transaldolase	NA	M4SLG0	Cyanophage	29.3	1.7e-14
AVD51272.1|549061_550882_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	28.7	7.7e-49
>prophage 37
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	560935	561643	2906671		Enterococcus_phage(100.0%)	1	NA	NA
AVD51282.1|560935_561643_+	serine/threonine protein phosphatase	NA	A0A249Y183	Enterococcus_phage	28.2	1.0e-20
>prophage 38
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	573937	576780	2906671		Anomala_cuprea_entomopoxvirus(50.0%)	3	NA	NA
AVD51297.1|573937_574873_+	ABC transporter	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.6	1.2e-24
AVD51298.1|574865_575636_+	ABC transporter permease	NA	NA	NA	NA	NA
AVD51299.1|575895_576780_+	KR domain-containing protein	NA	F2NZ40	Diadromus_pulchellus_ascovirus	44.0	4.4e-58
>prophage 39
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	591308	595878	2906671		Indivirus(33.33%)	4	NA	NA
AVD51320.1|591308_593222_+	glycosyl transferase family 2	NA	A0A1V0SEC5	Indivirus	26.1	6.5e-06
AVD51321.1|593234_594143_+	chemotaxis protein CheV	NA	Q56AR1	Bacillus_thuringiensis_phage	35.4	8.8e-46
AVD51322.1|594380_595244_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
AVD51323.1|595518_595878_+	two-component system response regulator	NA	W8CYM9	Bacillus_phage	36.9	7.6e-09
>prophage 40
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	618021	628021	2906671		Geobacillus_virus(25.0%)	10	NA	NA
AVD51348.1|618021_618690_+	transglycosylase	NA	A0A0H3V0Q1	Geobacillus_virus	54.8	1.1e-29
AVD51349.1|618703_619348_+	hypothetical protein	NA	NA	NA	NA	NA
AVD51350.1|619466_619793_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AVD51351.1|619792_620116_+	DUF1048 domain-containing protein	NA	NA	NA	NA	NA
AVD51352.1|620158_620806_-	elongation factor G-binding protein	NA	NA	NA	NA	NA
AVD51353.1|621076_622807_+	pyruvate oxidase	NA	H8ZJ31	Ostreococcus_tauri_virus	22.0	1.4e-12
AVD51354.1|622967_624773_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	20.4	1.1e-07
AVD51355.1|624785_625514_+	hypothetical protein	NA	NA	NA	NA	NA
AVD51356.1|625556_625769_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
AVD51357.1|626215_628021_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1HQK2	Paramecium_bursaria_Chlorella_virus	39.1	3.6e-99
>prophage 41
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	633211	638796	2906671		Planktothrix_phage(66.67%)	6	NA	NA
AVD51363.1|633211_633721_+	XRE family transcriptional regulator	NA	A0A2H4J4N8	uncultured_Caudovirales_phage	46.7	6.5e-06
AVD51364.1|634107_634767_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
AVD51365.1|635029_635407_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AVD51366.1|635390_636080_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	23.9	7.5e-05
AVD51367.1|636076_636781_+	ABC transporter permease	NA	NA	NA	NA	NA
AVD51368.1|636795_638796_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	7.4e-29
>prophage 42
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	643008	643914	2906671		Staphylococcus_phage(100.0%)	1	NA	NA
AVD51374.1|643008_643914_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	38.6	1.5e-37
>prophage 43
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	661108	662038	2906671		Catovirus(100.0%)	1	NA	NA
AVD51392.1|661108_662038_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	28.5	5.5e-19
>prophage 44
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	695832	696927	2906671		Mycoplasma_phage(100.0%)	1	NA	NA
AVD51425.1|695832_696927_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	45.8	6.7e-40
>prophage 45
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	702510	703695	2906671		Clostridium_phage(100.0%)	1	NA	NA
AVD51432.1|702510_703695_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0A7RTT7	Clostridium_phage	31.3	1.0e-38
>prophage 46
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	711179	717369	2906671		Acanthocystis_turfacea_Chlorella_virus(50.0%)	7	NA	NA
AVD51441.1|711179_713810_+	magnesium-transporting ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	29.5	1.6e-79
AVD51442.1|713824_714673_+	hypothetical protein	NA	NA	NA	NA	NA
AVD51443.1|714782_715340_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AVD51444.1|715356_716019_+	DUF3153 domain-containing protein	NA	NA	NA	NA	NA
AVD51445.1|716034_716424_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AVD51446.1|716395_716638_-	hypothetical protein	NA	NA	NA	NA	NA
AVD51447.1|716544_717369_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	50.0	5.5e-71
>prophage 47
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	733070	734741	2906671		Bacillus_phage(100.0%)	1	NA	NA
AVD51458.1|733070_734741_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.7	3.7e-58
>prophage 48
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	738539	741182	2906671		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
AVD51462.1|738539_741182_+	ATPase	NA	M1HJQ2	Paramecium_bursaria_Chlorella_virus	29.8	6.3e-92
>prophage 49
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	748824	753466	2906671		uncultured_virus(50.0%)	4	NA	NA
AVD51467.1|748824_749928_+	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	NA	A0A218MNE0	uncultured_virus	49.5	4.6e-97
AVD51468.1|750032_751133_+	excinuclease ABC subunit C	NA	NA	NA	NA	NA
AVD51469.1|751302_752745_+	glutamine ABC transporter permease	NA	NA	NA	NA	NA
AVD51470.1|752737_753466_+	peptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.3	2.4e-30
>prophage 50
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	769690	773379	2906671		Streptococcus_phage(50.0%)	2	NA	NA
AVD51486.1|769690_771364_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	40.8	5.0e-119
AVD51487.1|771825_773379_+	ATP-dependent RNA helicase CshA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	37.4	5.3e-67
>prophage 51
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	790762	792704	2906671		Yellowstone_lake_mimivirus(50.0%)	3	NA	NA
AVD51508.1|790762_791869_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	30.8	1.4e-37
AVD51509.1|792074_792353_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
AVD51510.1|792356_792704_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5RCS0	Lactobacillus_phage	40.4	9.9e-14
>prophage 52
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	796515	799731	2906671		Bacillus_phage(50.0%)	3	NA	NA
AVD51517.1|796515_797295_+	RNA polymerase sigma factor SigB	NA	A0A0A0RV91	Bacillus_phage	34.6	3.3e-25
AVD51518.1|797295_797895_+	serine phosphatase	NA	NA	NA	NA	NA
AVD51519.1|798099_799731_+	sodium-independent anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.2	1.4e-46
>prophage 53
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	802814	803255	2906671		Faustovirus(100.0%)	1	NA	NA
AVD51522.1|802814_803255_+	DUF1768 domain-containing protein	NA	A0A141ZK81	Faustovirus	52.5	9.9e-35
>prophage 54
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	808223	808721	2906671		Pseudomonas_phage(100.0%)	1	NA	NA
AVD51529.1|808223_808721_+	hypothetical protein	NA	A0A1Y0SYU1	Pseudomonas_phage	28.0	1.4e-05
>prophage 55
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	822643	824215	2906671		Streptococcus_phage(100.0%)	1	NA	NA
AVD51543.1|822643_824215_+	ABC-F type ribosomal protection protein	NA	A0A1B0RXA0	Streptococcus_phage	34.5	2.1e-63
>prophage 56
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	827359	831869	2906671		Staphylococcus_phage(50.0%)	4	NA	NA
AVD51547.1|827359_828082_+	glycosyl transferase family 2	NA	A0A2H4PQG7	Staphylococcus_phage	30.0	1.3e-23
AVD51548.1|828081_829197_+	ABC transporter permease	NA	NA	NA	NA	NA
AVD51549.1|829219_829876_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AVD51550.1|829907_831869_-	glycerol phosphate lipoteichoic acid synthase	NA	W6LM83	Streptococcus_phage	45.2	4.0e-136
>prophage 57
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	843593	847851	2906671		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
AVD51564.1|843593_845399_-	HSP90 family protein	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	30.7	1.9e-15
AVD51565.1|845601_846072_+	DNA starvation/stationary phase protection protein	NA	NA	NA	NA	NA
AVD51566.1|846305_846608_+	hypothetical protein	NA	NA	NA	NA	NA
AVD51567.1|846638_846779_+	beta-lactamase	NA	NA	NA	NA	NA
AVD51568.1|846720_847851_+	MBL fold protein	NA	Q332C0	Clostridium_botulinum_C_phage	36.5	2.8e-41
>prophage 58
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	860446	861673	2906671	protease	Phage_TP(100.0%)	1	NA	NA
AVD51584.1|860446_861673_+|protease	collagenase-like protease	protease	Q6DW11	Phage_TP	32.3	6.5e-44
>prophage 59
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	870405	873119	2906671		Pseudomonas_phage(50.0%)	2	NA	NA
AVD51596.1|870405_871590_-	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	A0A125RNP0	Pseudomonas_phage	27.3	1.6e-18
AVD51597.1|871586_873119_-	D-alanine--poly(phosphoribitol) ligase	NA	A0A2K9L3I8	Tupanvirus	27.9	2.8e-44
>prophage 60
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	876864	877629	2906671		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
AVD51603.1|876864_877629_+	export ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.4	1.3e-21
>prophage 61
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	882581	889856	2906671		Bacillus_phage(50.0%)	7	NA	NA
AVD51610.1|882581_883493_+	ABC transporter	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.5	1.2e-23
AVD51611.1|883485_884340_+	ABC transporter permease	NA	NA	NA	NA	NA
AVD51612.1|884421_885990_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	27.7	1.6e-31
AVD51613.1|886097_886523_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AVD51614.1|886575_887937_+	multidrug transporter MatE	NA	NA	NA	NA	NA
AVD51615.1|888218_888986_+	hypothetical protein	NA	A0A068EP98	Bacillus_phage	40.7	2.6e-30
AVD51616.1|889088_889856_+	hypothetical protein	NA	A0A068EP98	Bacillus_phage	38.5	7.0e-28
>prophage 62
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	892928	895592	2906671	protease	Acanthamoeba_polyphaga_mimivirus(50.0%)	2	NA	NA
AVD51619.1|892928_893408_+	cysteine methyltransferase	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	50.5	2.2e-19
AVD51620.1|893423_895592_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A1C3S747	Escherichia_phage	42.6	4.9e-127
>prophage 63
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	910363	911557	2906671		Bacillus_virus(100.0%)	1	NA	NA
AVD51636.1|910363_911557_+	glycine/betaine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.3	1.3e-28
>prophage 64
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	927827	928652	2906671		Micromonas_pusilla_virus(100.0%)	1	NA	NA
AVD51654.1|927827_928652_+	transketolase	NA	G9E5U1	Micromonas_pusilla_virus	32.8	3.4e-12
>prophage 65
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	935683	936346	2906671		Planktothrix_phage(100.0%)	1	NA	NA
AVD51661.1|935683_936346_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.8	1.7e-17
>prophage 66
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	944120	944672	2906671		Synechococcus_phage(100.0%)	1	NA	NA
AVD51673.1|944120_944672_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.7	8.3e-15
>prophage 67
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	949350	950754	2906671		Erysipelothrix_phage(100.0%)	1	NA	NA
AVD51677.1|949350_950754_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	30.4	3.5e-49
>prophage 68
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	956070	957909	2906671		Streptococcus_phage(100.0%)	1	NA	NA
AVD51685.1|956070_957909_+	translational GTPase TypA	NA	A0A1S5SF82	Streptococcus_phage	24.2	7.3e-23
>prophage 69
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	966957	973857	2906671		Staphylococcus_phage(33.33%)	4	NA	NA
AVD51693.1|966957_967965_+	teichoic acids export ATP-binding protein TagH	NA	A0A2H4PQG7	Staphylococcus_phage	25.4	3.6e-16
AVD51694.1|968188_970513_+	GW domain-containing glycosaminoglycan-binding protein	NA	S5M633	Brevibacillus_phage	50.7	1.1e-31
AVD51695.1|970575_972582_-	teichoic acid biosynthesis protein	NA	NA	NA	NA	NA
AVD51696.1|972873_973857_+	glycosyltransferase	NA	A8CG95	Salmonella_phage	37.9	6.0e-48
>prophage 70
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	979381	980269	2906671		Bacillus_phage(100.0%)	1	NA	NA
AVD51700.1|979381_980269_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	50.7	3.7e-73
>prophage 71
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	986128	993555	2906671	integrase	Hokovirus(28.57%)	9	976040:976053	994134:994147
976040:976053	attL	AGAAGCGGGAATAA	NA	NA	NA	NA
AVD51706.1|986128_986512_+	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	39.3	4.4e-15
AVD51707.1|986629_988120_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	49.5	2.8e-113
AVD51708.1|988131_988956_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.6	9.7e-68
AVD51709.1|988968_989277_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AVD51710.1|989336_989741_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
AVD51711.1|989869_991426_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	28.1	2.3e-17
AVD51712.1|991624_992104_-	XRE family transcriptional regulator	NA	A0A2H4JDE4	uncultured_Caudovirales_phage	34.3	7.3e-07
AVD51713.1|992281_992479_+	LysR family transcriptional regulator	NA	Q8SBM7	Clostridium_phage	46.3	1.5e-06
AVD51714.1|992481_993555_+|integrase	site-specific integrase	integrase	A0A0A8WF08	Clostridium_phage	46.5	5.5e-87
994134:994147	attR	AGAAGCGGGAATAA	NA	NA	NA	NA
>prophage 72
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1002683	1003571	2906671		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
AVD51725.1|1002683_1003571_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	31.2	3.5e-15
>prophage 73
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1018572	1021936	2906671		Bacillus_phage(50.0%)	2	NA	NA
AVD51745.1|1018572_1020288_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	23.2	1.9e-17
AVD51746.1|1020289_1021936_+	ABC transporter ATP-binding protein	NA	F2Y165	Organic_Lake_phycodnavirus	29.5	9.2e-17
>prophage 74
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1082884	1083691	2906671		Streptococcus_phage(100.0%)	1	NA	NA
AVD51820.1|1082884_1083691_+	ABC transporter ATP-binding protein	NA	Q6DMX7	Streptococcus_phage	28.4	5.9e-09
>prophage 75
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1086820	1090700	2906671		Leuconostoc_phage(33.33%)	6	NA	NA
AVD51825.1|1086820_1087351_+	DNA topology modulation protein	NA	A0A097BYE2	Leuconostoc_phage	30.2	5.0e-09
AVD51826.1|1087381_1087693_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AVD51827.1|1087695_1088208_+	DUF2812 domain-containing protein	NA	NA	NA	NA	NA
AVD51828.1|1088423_1088639_-	hypothetical protein	NA	NA	NA	NA	NA
AVD51829.1|1088547_1089417_+	GW domain-containing glycosaminoglycan-binding protein	NA	S5M633	Brevibacillus_phage	51.0	4.2e-37
AVD53563.1|1089713_1090700_+	GW domain-containing glycosaminoglycan-binding protein	NA	A0A0A7RU71	Clostridium_phage	43.4	2.2e-26
>prophage 76
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1093926	1098249	2906671	tRNA	Tupanvirus(50.0%)	3	NA	NA
AVD51834.1|1093926_1094979_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	34.9	1.3e-29
AVD51835.1|1094978_1097387_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AVD51836.1|1097547_1098249_+	macrolide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.8	3.0e-33
>prophage 77
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1105542	1112716	2906671		Canid_alphaherpesvirus(25.0%)	7	NA	NA
AVD51840.1|1105542_1106217_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	47.7	3.4e-50
AVD51841.1|1106254_1107181_-	ribonuclease HIII	NA	NA	NA	NA	NA
AVD51842.1|1107334_1107598_+	cell division protein ZapA	NA	NA	NA	NA	NA
AVD51843.1|1107597_1108140_+	CvpA family protein	NA	NA	NA	NA	NA
AVD51844.1|1108231_1109944_+	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.5	1.9e-17
AVD51845.1|1109966_1112324_+	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	50.4	1.0e-21
AVD51846.1|1112404_1112716_+	thiol reductase thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	39.6	5.4e-19
>prophage 78
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1119716	1119818	2906671	integrase	Listeria_phage(100.0%)	1	1119679:1119699	1121339:1121359
1119679:1119699	attL	ATGTTTTAGAGATTTTTTTAT	NA	NA	NA	NA
AVD51854.1|1119716_1119818_-|integrase	integrase	integrase	A0A059T688	Listeria_phage	66.7	2.4e-05
AVD51854.1|1119716_1119818_-|integrase	integrase	integrase	A0A059T688	Listeria_phage	66.7	2.4e-05
1121339:1121359	attR	ATGTTTTAGAGATTTTTTTAT	NA	NA	NA	NA
>prophage 79
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1127896	1130324	2906671		Lactococcus_phage(50.0%)	3	NA	NA
AVD51860.1|1127896_1128496_+	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	41.0	1.3e-29
AVD51861.1|1128527_1128788_-	hypothetical protein	NA	NA	NA	NA	NA
AVD51862.1|1128911_1130324_+	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.0	4.9e-51
>prophage 80
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1141475	1145298	2906671	protease	Streptococcus_phage(66.67%)	4	NA	NA
AVD51877.1|1141475_1142723_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	51.8	2.7e-106
AVD51878.1|1142706_1143537_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	42.4	3.6e-46
AVD51879.1|1143683_1144823_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
AVD51880.1|1144902_1145298_-	XRE family transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
>prophage 81
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1149784	1162512	2906671	tRNA,protease	Bacillus_virus(20.0%)	12	NA	NA
AVD51886.1|1149784_1151044_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
AVD51887.1|1151162_1151729_+	signal peptidase I	NA	NA	NA	NA	NA
AVD51888.1|1151763_1152333_+	signal peptidase I	NA	NA	NA	NA	NA
AVD51889.1|1152434_1152977_+	signal peptidase I	NA	NA	NA	NA	NA
AVD51890.1|1152986_1153850_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
AVD51891.1|1153846_1154632_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	37.6	6.7e-26
AVD51892.1|1154765_1155626_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
AVD51893.1|1155898_1157977_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	5.4e-107
AVD51894.1|1158039_1159344_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
AVD51895.1|1159626_1160529_+	tyrosine recombinase XerC	NA	A0A142K7N4	Mycobacterium_phage	29.5	1.8e-14
AVD51896.1|1160549_1161089_+	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
AVD51897.1|1161102_1162512_+	HslU--HslV peptidase ATPase subunit	NA	W6AS21	Erwinia_phage	27.8	7.5e-44
>prophage 82
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1166427	1170851	2906671		Bacillus_virus(100.0%)	2	NA	NA
AVD51904.1|1166427_1168395_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	5.1e-123
AVD51905.1|1168391_1170851_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	1.1e-101
>prophage 83
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1173882	1176680	2906671		Pseudomonas_phage(50.0%)	2	NA	NA
AVD51908.1|1173882_1175769_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	32.2	2.9e-43
AVD51909.1|1175981_1176680_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	31.9	6.4e-12
>prophage 84
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1183181	1187158	2906671		Klosneuvirus(33.33%)	4	NA	NA
AVD51916.1|1183181_1184516_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
AVD51917.1|1184659_1185955_+	arsenical efflux pump membrane protein ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	62.6	2.5e-147
AVD51918.1|1185988_1186513_-	N-acetyltransferase	NA	NA	NA	NA	NA
AVD51919.1|1186543_1187158_-	LexA repressor	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
>prophage 85
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1190614	1197302	2906671		Streptococcus_phage(60.0%)	8	NA	NA
AVD51924.1|1190614_1191346_-	SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	58.0	2.3e-81
AVD51925.1|1191367_1191874_-	chromosome partitioning protein ParB	NA	A0A220GKT8	Streptococcus_phage	66.7	1.4e-56
AVD51926.1|1191883_1193188_-	phosphoadenosine phosphosulfate sulfurtransferase	NA	A0A220GKF8	Streptococcus_phage	51.9	4.7e-133
AVD51927.1|1193177_1194383_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	46.6	7.0e-91
AVD51928.1|1194360_1194735_-	hypothetical protein	NA	NA	NA	NA	NA
AVD51929.1|1195027_1195756_+	UMP kinase	NA	NA	NA	NA	NA
AVD51930.1|1195755_1196313_+	ribosome-recycling factor	NA	NA	NA	NA	NA
AVD51931.1|1196543_1197302_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	3.3e-22
>prophage 86
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1202389	1214143	2906671	tRNA	Clostridium_phage(33.33%)	10	NA	NA
AVD51936.1|1202389_1206724_+	DNA polymerase III subunit alpha	NA	A0A0A7RWA3	Clostridium_phage	35.1	8.6e-22
AVD51937.1|1206905_1207373_+	ribosome maturation factor	NA	NA	NA	NA	NA
AVD51938.1|1207402_1208521_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
AVD51939.1|1208535_1208820_+	DUF448 domain-containing protein	NA	NA	NA	NA	NA
AVD51940.1|1208812_1209112_+	hypothetical protein	NA	NA	NA	NA	NA
AVD51941.1|1209134_1211483_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	23.4	3.0e-21
AVD51942.1|1211479_1211758_+	DUF503 domain-containing protein	NA	NA	NA	NA	NA
AVD51943.1|1211774_1212119_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
AVD51944.1|1212214_1213129_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
AVD51945.1|1213198_1214143_+	bifunctional riboflavin kinase/FAD synthetase	NA	A0A1V0SD03	Indivirus	33.3	1.8e-09
>prophage 87
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1229576	1232386	2906671		Prochlorococcus_phage(100.0%)	2	NA	NA
AVD51965.1|1229576_1230923_+	glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	39.0	1.0e-61
AVD51966.1|1230919_1232386_+	glycine dehydrogenase	NA	E3ST28	Prochlorococcus_phage	43.0	2.1e-89
>prophage 88
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1238960	1242686	2906671		Enterococcus_phage(33.33%)	5	NA	NA
AVD51976.1|1238960_1239815_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	40.5	7.8e-36
AVD51977.1|1239833_1241186_+	exodeoxyribonuclease VII large subunit	NA	A0A1B3AYB4	Gordonia_phage	34.9	1.2e-30
AVD51978.1|1241175_1241403_+	exodeoxyribonuclease 7 small subunit	NA	NA	NA	NA	NA
AVD51979.1|1241405_1242287_+	geranyl transferase	NA	NA	NA	NA	NA
AVD51980.1|1242485_1242686_+	cold-shock protein CspA	NA	Q9AZD3	Lactococcus_phage	75.8	1.3e-21
>prophage 89
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1250071	1251499	2906671		Erysipelothrix_phage(100.0%)	1	NA	NA
AVD51986.1|1250071_1251499_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.4	2.7e-41
>prophage 90
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1256411	1260149	2906671		Bacillus_phage(66.67%)	3	NA	NA
AVD51992.1|1256411_1257830_+	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	NA	A0A0P0C6S9	Ostreococcus_lucimarinus_virus	29.1	5.4e-42
AVD51993.1|1258020_1258701_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	32.3	8.7e-30
AVD51994.1|1258697_1260149_+	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	27.7	1.4e-24
>prophage 91
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1264539	1275563	2906671		Streptococcus_phage(50.0%)	8	NA	NA
AVD53566.1|1264539_1265466_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	31.0	5.0e-28
AVD52001.1|1265616_1267890_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.7	1.2e-83
AVD52002.1|1267923_1268763_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
AVD52003.1|1269115_1270189_+	CD4+ T-cell-stimulating antigen	NA	NA	NA	NA	NA
AVD52004.1|1270620_1272162_+	heme ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	28.8	2.6e-13
AVD52005.1|1272154_1273207_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AVD52006.1|1273203_1274154_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AVD52007.1|1274270_1275563_+	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	31.3	2.3e-55
>prophage 92
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1280886	1281933	2906671		Bacillus_phage(100.0%)	1	NA	NA
AVD52012.1|1280886_1281933_+	DNA recombination/repair protein RecA	NA	A0A0S2MVG1	Bacillus_phage	72.1	5.4e-132
>prophage 93
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1285705	1297012	2906671		Catovirus(20.0%)	9	NA	NA
AVD52017.1|1285705_1288288_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	24.9	1.7e-38
AVD52018.1|1288307_1290119_+	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	34.6	2.0e-73
AVD52019.1|1290135_1290684_+	glycerol-3-phosphate responsive antiterminator GlpP	NA	NA	NA	NA	NA
AVD52020.1|1291109_1293341_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	43.4	2.5e-182
AVD52021.1|1293417_1294164_+	pyruvate formate-lyase-activating enzyme	NA	E5DI79	Enterobacter_phage	35.3	2.5e-06
AVD52022.1|1294197_1294728_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AVD52023.1|1294894_1296088_+	MFS transporter	NA	NA	NA	NA	NA
AVD52024.1|1296221_1296770_+	DUF2975 domain-containing protein	NA	NA	NA	NA	NA
AVD53568.1|1296784_1297012_+	transcriptional regulator	NA	A0A0E3U244	Fusobacterium_phage	29.4	1.7e-06
>prophage 94
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1314501	1318920	2906671		Organic_Lake_phycodnavirus(50.0%)	4	NA	NA
AVD52041.1|1314501_1315695_-	osmoprotectant	NA	F2Y1V5	Organic_Lake_phycodnavirus	29.6	3.2e-11
AVD52042.1|1315987_1316548_-	energy-coupled thiamine transporter ThiT	NA	NA	NA	NA	NA
AVD52043.1|1316795_1317179_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52044.1|1317318_1318920_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	26.3	3.2e-51
>prophage 95
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1328432	1329041	2906671		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
AVD52052.1|1328432_1329041_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	59.1	5.0e-69
>prophage 96
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1334780	1338858	2906671		Staphylococcus_phage(33.33%)	4	NA	NA
AVD52060.1|1334780_1335554_-	zinc ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	5.3e-15
AVD52061.1|1335698_1336625_-	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
AVD52062.1|1336641_1337535_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.2	1.3e-20
AVD52063.1|1337550_1338858_-	DEAD-box ATP-dependent RNA helicase CshB	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	30.7	4.8e-45
>prophage 97
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1341934	1345034	2906671		Vibrio_phage(50.0%)	2	NA	NA
AVD52066.1|1341934_1343059_-	RNA polymerase sigma factor SigA	NA	A0A2I7SAT0	Vibrio_phage	37.6	8.4e-38
AVD52067.1|1343153_1345034_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.1	5.0e-59
>prophage 98
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1355720	1362602	2906671		Catovirus(50.0%)	7	NA	NA
AVD52079.1|1355720_1356680_-	phosphate starvation-inducible protein PhoH	NA	L7TP00	Rhizobium_phage	48.1	1.5e-48
AVD52080.1|1356867_1357314_-	GatB/YqeY domain-containing protein	NA	G3MAQ0	Bacillus_virus	38.5	9.4e-17
AVD52081.1|1357333_1357507_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AVD52082.1|1357704_1358472_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AVD52083.1|1358472_1359417_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
AVD52084.1|1359488_1360619_-	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	27.8	3.2e-29
AVD52085.1|1360760_1362602_-	molecular chaperone DnaK	NA	A0A1V0SAK3	Catovirus	46.5	3.1e-138
>prophage 99
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1367307	1373635	2906671		Streptococcus_phage(33.33%)	5	NA	NA
AVD52091.1|1367307_1369134_-	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	23.9	6.2e-22
AVD52092.1|1369378_1369633_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
AVD52093.1|1369718_1370750_-	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
AVD52094.1|1370817_1373040_-	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	36.6	3.1e-36
AVD52095.1|1373074_1373635_-	ComE operon protein 2	NA	A0A127AWN5	Bacillus_phage	57.5	3.8e-31
>prophage 100
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1383561	1384191	2906671		Tupanvirus(100.0%)	1	NA	NA
AVD52110.1|1383561_1384191_-	uridine kinase	NA	A0A2K9L178	Tupanvirus	37.1	9.5e-31
>prophage 101
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1387956	1397833	2906671	tRNA	Bacillus_phage(50.0%)	6	NA	NA
AVD52117.1|1387956_1390596_-|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L3D8	Tupanvirus	33.6	4.8e-68
AVD52118.1|1390902_1391598_-	ABC transporter	NA	NA	NA	NA	NA
AVD52119.1|1391606_1393106_-	macrolide ABC transporter permease	NA	NA	NA	NA	NA
AVD52120.1|1393272_1393959_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	36.0	5.7e-37
AVD52121.1|1393955_1395395_+	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	33.1	3.8e-35
AVD52122.1|1395436_1397833_-	ATP-dependent RecD-like DNA helicase	NA	A0A1P8DII4	Virus_Rctr197k	32.6	9.8e-44
>prophage 102
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1402061	1423866	2906671	tRNA	Bacillus_phage(30.0%)	19	NA	NA
AVD52126.1|1402061_1403345_-	recombinase RarA	NA	A0A127AWE7	Bacillus_phage	50.7	1.2e-112
AVD52127.1|1403493_1403916_+	transcriptional regulator	NA	NA	NA	NA	NA
AVD52128.1|1404160_1405366_+	ammonium transporter	NA	NA	NA	NA	NA
AVD52129.1|1405379_1405745_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AVD52130.1|1405894_1406275_+	hypothetical protein	NA	NA	NA	NA	NA
AVD52131.1|1406314_1408090_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SJ84	Klosneuvirus	24.6	8.7e-13
AVD52132.1|1408091_1409369_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
AVD52133.1|1409819_1411103_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A067ZJB6	Vibrio_phage	35.5	4.0e-20
AVD52134.1|1411140_1411593_-|tRNA	D-aminoacyl-tRNA deacylase	tRNA	NA	NA	NA	NA
AVD52135.1|1411608_1413825_-	(p)ppGpp synthetase	NA	S4TRQ0	Salmonella_phage	40.5	4.0e-07
AVD52136.1|1414030_1414552_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	41.6	1.5e-29
AVD52137.1|1414541_1416893_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	32.0	6.8e-82
AVD52138.1|1416997_1417342_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
AVD52139.1|1417439_1419704_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	31.2	9.3e-20
AVD52140.1|1419804_1420095_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52141.1|1420237_1420567_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	42.5	1.4e-09
AVD52142.1|1420600_1421740_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.4	2.2e-86
AVD52143.1|1421826_1422855_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AVD52144.1|1422858_1423866_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	24.7	1.6e-08
>prophage 103
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1431870	1432188	2906671	protease	Enterococcus_phage(100.0%)	1	NA	NA
AVD52153.1|1431870_1432188_-|protease	ribosomal-processing cysteine protease Prp	protease	D2J003	Enterococcus_phage	31.4	1.1e-06
>prophage 104
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1441661	1444313	2906671	tRNA	Catovirus(100.0%)	1	NA	NA
AVD52164.1|1441661_1444313_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	41.9	4.1e-160
>prophage 105
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1450688	1461336	2906671	tRNA	Tupanvirus(20.0%)	9	NA	NA
AVD52171.1|1450688_1452611_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.4	6.1e-105
AVD53571.1|1452636_1452831_+	hypothetical protein	NA	NA	NA	NA	NA
AVD52172.1|1452960_1453884_-	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	28.9	4.8e-31
AVD52173.1|1453893_1455270_-	helicase DnaB	NA	NA	NA	NA	NA
AVD52174.1|1455275_1455740_-	transcriptional regulator NrdR	NA	NA	NA	NA	NA
AVD52175.1|1455817_1456420_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
AVD52176.1|1456436_1457258_-	formamidopyrimidine-DNA glycosylase	NA	G3MA33	Bacillus_virus	34.8	4.5e-33
AVD52177.1|1457281_1459909_-	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	32.7	7.7e-50
AVD52178.1|1460073_1461336_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.2	1.7e-10
>prophage 106
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1468959	1473343	2906671		Streptomyces_phage(50.0%)	2	NA	NA
AVD52186.1|1468959_1472286_-	DNA polymerase III subunit alpha	NA	A0A1C9LWZ5	Streptomyces_phage	30.7	1.6e-148
AVD52187.1|1472407_1473343_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	G3MA01	Bacillus_virus	24.7	8.9e-17
>prophage 107
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1482080	1486215	2906671		Wolbachia_phage(33.33%)	4	NA	NA
AVD52196.1|1482080_1483094_-	signal peptide peptidase SppA	NA	F8QZT1	Wolbachia_phage	31.2	2.5e-17
AVD52197.1|1483272_1484076_+	NAD kinase	NA	NA	NA	NA	NA
AVD52198.1|1484107_1485058_-	ornithine carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	26.6	1.6e-18
AVD52199.1|1485054_1486215_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.3	3.5e-23
>prophage 108
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1495281	1497870	2906671	tRNA	Cronobacter_phage(50.0%)	2	NA	NA
AVD52209.1|1495281_1496541_-|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	43.9	7.3e-91
AVD52210.1|1496862_1497870_-	catabolite control protein A	NA	C6ZCU4	Enterobacteria_phage	27.7	1.4e-20
>prophage 109
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1504147	1508232	2906671		Mycobacterium_phage(50.0%)	3	NA	NA
AVD52217.1|1504147_1506499_-	DNA translocase FtsK	NA	Q853W3	Mycobacterium_phage	52.0	1.0e-90
AVD52218.1|1506808_1507426_-	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
AVD52219.1|1507431_1508232_-	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	58.6	1.5e-36
>prophage 110
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1526614	1528966	2906671		Acinetobacter_phage(100.0%)	3	NA	NA
AVD52241.1|1526614_1527373_-	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	40.6	3.9e-31
AVD52242.1|1527369_1528389_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	36.8	1.1e-55
AVD52243.1|1528360_1528966_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	45.3	1.8e-39
>prophage 111
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1534647	1535568	2906671		Staphylococcus_phage(100.0%)	1	NA	NA
AVD52247.1|1534647_1535568_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	38.2	2.6e-37
>prophage 112
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1542672	1549046	2906671		uncultured_Mediterranean_phage(50.0%)	2	NA	NA
AVD52255.1|1542672_1545891_-	helicase SNF2	NA	A0A1B1ISM1	uncultured_Mediterranean_phage	27.2	4.7e-33
AVD52256.1|1545974_1549046_-	exonuclease	NA	G3MAB6	Bacillus_virus	22.1	4.7e-06
>prophage 113
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1552190	1555749	2906671		Aureococcus_anophage(50.0%)	2	NA	NA
AVD52261.1|1552190_1553996_-	multidrug ABC transporter ATP-binding protein	NA	A0A076FI99	Aureococcus_anophage	22.4	7.4e-20
AVD52262.1|1553979_1555749_-	multidrug ABC transporter permease/ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.9	7.2e-52
>prophage 114
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1565532	1573111	2906671	tRNA	Staphylococcus_phage(80.0%)	5	NA	NA
AVD52272.1|1565532_1567944_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	70.3	0.0e+00
AVD52273.1|1568347_1569313_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	64.2	2.4e-49
AVD52274.1|1569309_1569888_+	rRNA methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	45.0	3.5e-40
AVD52275.1|1569909_1571775_-	asparagine synthase (glutamine-hydrolyzing)	NA	A0A1V0SGM7	Hokovirus	29.4	2.4e-37
AVD52276.1|1571911_1573111_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	69.8	1.9e-149
>prophage 115
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1580321	1583665	2906671		Staphylococcus_phage(100.0%)	4	NA	NA
AVD52281.1|1580321_1580795_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	37.5	4.3e-20
AVD52282.1|1580868_1581135_+	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA	NA
AVD52283.1|1581284_1582238_+	adhesin	NA	NA	NA	NA	NA
AVD52284.1|1582255_1583665_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	34.3	1.6e-70
>prophage 116
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1591448	1593738	2906671		Pandoravirus(100.0%)	2	NA	NA
AVD52291.1|1591448_1592621_-	cystathionine gamma-synthase	NA	A0A0B5JD48	Pandoravirus	26.2	6.5e-17
AVD52292.1|1592613_1593738_-	cystathionine gamma-synthase	NA	A0A0B5JD48	Pandoravirus	30.4	4.8e-17
>prophage 117
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1612828	1613290	2906671		Clostridium_botulinum_D_phage(100.0%)	1	NA	NA
AVD52303.1|1612828_1613290_-	dUTPase	NA	Q2WG49	Clostridium_botulinum_D_phage	57.6	9.7e-41
>prophage 118
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1620614	1625164	2906671		uncultured_Caudovirales_phage(33.33%)	7	NA	NA
AVD52311.1|1620614_1621517_+	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.2	7.8e-10
AVD52312.1|1621544_1621751_+	hypothetical protein	NA	NA	NA	NA	NA
AVD52313.1|1621790_1622144_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52314.1|1622172_1622574_-	fosfomycin resistance thiol transferase FosX	NA	NA	NA	NA	NA
AVD52315.1|1622588_1623968_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	38.7	1.4e-87
AVD52316.1|1624032_1624413_-	osmotically inducible protein C	NA	NA	NA	NA	NA
AVD52317.1|1624519_1625164_+	deoxynucleoside kinase	NA	Q5ULP7	Lactobacillus_virus	44.4	7.2e-42
>prophage 119
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1639888	1641217	2906671		Catovirus(100.0%)	1	NA	NA
AVD52334.1|1639888_1641217_-	ATP-dependent helicase	NA	A0A1V0SBR7	Catovirus	30.0	2.4e-36
>prophage 120
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1659507	1664781	2906671		Bacillus_phage(33.33%)	6	NA	NA
AVD52345.1|1659507_1660026_-	N-acetyltransferase	NA	A0A1P8CWJ6	Bacillus_phage	41.6	4.7e-28
AVD52346.1|1660028_1661135_-	oxidoreductase	NA	NA	NA	NA	NA
AVD52347.1|1661226_1662042_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVD52348.1|1662043_1662691_-	polar amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.3	1.2e-28
AVD52349.1|1662701_1663343_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AVD52350.1|1663740_1664781_-	two-component sensor histidine kinase	NA	Q6XLV6	Feldmannia_irregularis_virus	29.4	9.9e-09
>prophage 121
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1670694	1676937	2906671		Planktothrix_phage(33.33%)	7	NA	NA
AVD52356.1|1670694_1671462_-	bacitracin ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.7	3.1e-28
AVD52357.1|1671590_1672100_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52358.1|1672323_1672797_+	shikimate kinase	NA	NA	NA	NA	NA
AVD52359.1|1672827_1673382_-	molybdate metabolism regulator	NA	NA	NA	NA	NA
AVD52360.1|1673716_1675078_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	49.7	2.8e-120
AVD52361.1|1675101_1675857_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52362.1|1676004_1676937_-	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	30.6	1.8e-17
>prophage 122
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1681529	1685766	2906671		Ralstonia_phage(50.0%)	2	NA	NA
AVD52367.1|1681529_1683545_-	DNA ligase (NAD(+)) LigA	NA	A0A0A8J9A9	Ralstonia_phage	38.6	3.1e-115
AVD52368.1|1683570_1685766_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.5	3.8e-135
>prophage 123
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1690105	1701550	2906671		Prochlorococcus_phage(25.0%)	11	NA	NA
AVD52374.1|1690105_1691635_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	50.7	2.0e-74
AVD52375.1|1691640_1692207_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.4	8.3e-26
AVD52376.1|1692203_1693253_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.4	3.2e-63
AVD52377.1|1693271_1694699_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
AVD52378.1|1694683_1696903_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.7	2.5e-158
AVD52379.1|1696895_1697579_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
AVD52380.1|1697582_1697828_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
AVD52381.1|1697839_1698553_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.3	2.0e-40
AVD52382.1|1698633_1699926_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.0	2.5e-17
AVD52383.1|1699944_1701069_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AVD52384.1|1701061_1701550_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.0	6.2e-22
>prophage 124
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1707665	1713380	2906671		Golden_Marseillevirus(25.0%)	9	NA	NA
AVD53575.1|1707665_1708271_-	phosphohydrolase	NA	A0A1D6Y7U0	Golden_Marseillevirus	26.5	7.5e-09
AVD52386.1|1708339_1709113_+	ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	27.2	6.0e-11
AVD52387.1|1709162_1709525_+	hypothetical protein	NA	NA	NA	NA	NA
AVD52388.1|1709543_1710776_-	peptidase T	NA	NA	NA	NA	NA
AVD52389.1|1710833_1711364_-	DUF1697 domain-containing protein	NA	NA	NA	NA	NA
AVD52390.1|1711447_1712203_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	48.5	8.1e-61
AVD52391.1|1712243_1712603_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AVD52392.1|1712642_1712843_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AVD53576.1|1712864_1713380_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	38.7	4.1e-16
>prophage 125
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1733547	1735515	2906671		Acanthamoeba_polyphaga_lentillevirus(33.33%)	3	NA	NA
AVD52413.1|1733547_1734237_-	ribonuclease 3	NA	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	31.7	6.5e-25
AVD52414.1|1734431_1734665_-	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	39.3	1.7e-06
AVD52415.1|1734771_1735515_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	A0A0G2Y924	Acanthamoeba_polyphaga_mimivirus	31.8	3.3e-06
>prophage 126
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1746889	1760625	2906671	tRNA	Pandoravirus(33.33%)	12	NA	NA
AVD52428.1|1746889_1748857_-	serine/threonine protein kinase	NA	A0A2H4UVE2	Bodo_saltans_virus	33.2	2.1e-23
AVD52429.1|1748853_1749612_-	serine/threonine phosphatase stp	NA	NA	NA	NA	NA
AVD52430.1|1749634_1750969_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
AVD52431.1|1750969_1751920_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.8	4.3e-11
AVD52432.1|1751933_1754327_-	primosomal protein N'	NA	NA	NA	NA	NA
AVD52433.1|1754331_1755531_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.2	1.2e-42
AVD53578.1|1755685_1755889_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
AVD52434.1|1755888_1756506_-	guanylate kinase	NA	S4W1R9	Pandoravirus	32.9	1.0e-13
AVD52435.1|1756524_1757400_-	YicC family protein	NA	NA	NA	NA	NA
AVD52436.1|1757556_1759269_+	DUF814 domain-containing protein	NA	Q84500	Paramecium_bursaria_Chlorella_virus	36.6	1.5e-06
AVD52437.1|1759356_1759956_+	short chain dehydrogenase	NA	NA	NA	NA	NA
AVD52438.1|1759995_1760625_-	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	34.1	1.8e-29
>prophage 127
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1766222	1773840	2906671		Halovirus(25.0%)	8	NA	NA
AVD52443.1|1766222_1767314_-	carbamoyl-phosphate synthase small chain	NA	R4TGJ8	Halovirus	37.6	1.1e-61
AVD52444.1|1767310_1768591_-	dihydroorotase	NA	NA	NA	NA	NA
AVD52445.1|1768578_1769490_-	aspartate carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	30.8	2.9e-28
AVD52446.1|1769570_1770857_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	35.8	1.4e-60
AVD52447.1|1770985_1771537_-	bifunctional pyrimidine operon transcriptional regulator/uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AVD52448.1|1771768_1771999_+	hypothetical protein	NA	NA	NA	NA	NA
AVD52449.1|1772086_1772911_+	STAS domain-containing protein	NA	NA	NA	NA	NA
AVD52450.1|1772928_1773840_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	29.8	1.4e-11
>prophage 128
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1779003	1784416	2906671		Staphylococcus_phage(33.33%)	5	NA	NA
AVD52456.1|1779003_1779726_-	manganese transport system ATP-binding protein MntB	NA	A0A2H4PQG7	Staphylococcus_phage	24.4	3.9e-12
AVD52457.1|1779885_1780302_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AVD52458.1|1780338_1781829_-	peptidase S41	NA	A0A0R6PIZ1	Moraxella_phage	30.4	8.6e-22
AVD52459.1|1781983_1782190_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52460.1|1782202_1784416_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	37.0	2.0e-112
>prophage 129
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1793402	1796042	2906671		Vibrio_phage(100.0%)	1	NA	NA
AVD52474.1|1793402_1796042_+	pyruvate, phosphate dikinase	NA	H8YJB7	Vibrio_phage	39.2	1.3e-86
>prophage 130
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1802424	1810141	2906671		Bacillus_phage(40.0%)	8	NA	NA
AVD52481.1|1802424_1802907_-	dihydrofolate reductase	NA	J9PU01	Bacillus_phage	47.6	5.7e-28
AVD52482.1|1802922_1803867_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	64.7	2.4e-118
AVD52483.1|1803879_1805772_-	multidrug ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	30.6	1.6e-57
AVD52484.1|1805891_1807574_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
AVD52485.1|1807731_1808160_-	transcriptional regulator MntR	NA	NA	NA	NA	NA
AVD52486.1|1808524_1808725_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	63.6	8.4e-18
AVD52487.1|1808848_1809250_+	ribonuclease HI	NA	NA	NA	NA	NA
AVD52488.1|1809268_1810141_-	flap endonuclease	NA	A0A0N7ACJ6	Bacillus_phage	35.8	5.9e-39
>prophage 131
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1818863	1819469	2906671		Bacillus_phage(100.0%)	1	NA	NA
AVD52497.1|1818863_1819469_+	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	35.5	2.2e-24
>prophage 132
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1823180	1829975	2906671	tRNA	Temperate_phage(33.33%)	5	NA	NA
AVD52501.1|1823180_1823900_-	DNA replication protein DnaD	NA	Q938N2	Temperate_phage	31.0	2.0e-08
AVD52502.1|1824049_1825342_-|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	30.8	4.2e-57
AVD52503.1|1825355_1826537_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
AVD52504.1|1826559_1827144_-	peptidase	NA	NA	NA	NA	NA
AVD52505.1|1827188_1829975_-	ATP-dependent helicase DinG	NA	A0A127AW80	Bacillus_phage	26.7	4.6e-53
>prophage 133
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1833907	1841359	2906671		Bacillus_phage(50.0%)	8	NA	NA
AVD52511.1|1833907_1835089_-	CCA-adding enzyme	NA	G3MAR3	Bacillus_virus	41.2	1.0e-33
AVD52512.1|1835103_1835508_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AVD52513.1|1835523_1836315_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
AVD52514.1|1836311_1836647_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
AVD52515.1|1836787_1837654_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	43.0	3.6e-65
AVD52516.1|1837643_1838750_-	oxidoreductase	NA	NA	NA	NA	NA
AVD52517.1|1839069_1840206_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	34.5	5.2e-19
AVD52518.1|1840231_1841359_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	2.7e-20
>prophage 134
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1846058	1851760	2906671	protease	Tetraselmis_virus(33.33%)	5	NA	NA
AVD52523.1|1846058_1848338_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	37.7	4.8e-141
AVD52524.1|1848385_1849651_-	aminoacetone oxidase family FAD-binding enzyme	NA	A0A2H4PQX1	Staphylococcus_phage	58.9	3.6e-29
AVD52525.1|1849760_1850444_-|protease	Zn-dependent protease	protease	NA	NA	NA	NA
AVD52526.1|1850530_1851127_-	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
AVD52527.1|1851214_1851760_-	hypothetical protein	NA	G3MAV7	Bacillus_virus	39.8	4.8e-31
>prophage 135
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1855604	1863606	2906671		Faustovirus(16.67%)	10	NA	NA
AVD52531.1|1855604_1856687_-	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	24.3	2.7e-17
AVD52532.1|1856686_1857061_-	chorismate mutase	NA	NA	NA	NA	NA
AVD52533.1|1857057_1858155_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
AVD52534.1|1858157_1859324_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	39.0	9.3e-48
AVD52535.1|1859527_1859971_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	48.1	8.1e-29
AVD52536.1|1859989_1860955_-	heptaprenyl diphosphate synthase component II	NA	A0A1V0SE37	Indivirus	21.0	2.3e-07
AVD52537.1|1860965_1861679_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
AVD52538.1|1861701_1862469_-	heptaprenyl diphosphate synthase	NA	NA	NA	NA	NA
AVD52539.1|1862525_1863095_-	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	47.7	1.4e-41
AVD52540.1|1863330_1863606_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	69.7	2.0e-25
>prophage 136
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1871868	1874654	2906671		Diadromus_pulchellus_ascovirus(50.0%)	3	NA	NA
AVD52547.1|1871868_1873272_-	ATP-dependent DNA helicase RecQ	NA	F2NZ48	Diadromus_pulchellus_ascovirus	35.3	5.9e-57
AVD52548.1|1873268_1874276_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52549.1|1874429_1874654_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	46.6	4.6e-12
>prophage 137
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1882581	1891901	2906671		Bacillus_phage(33.33%)	9	NA	NA
AVD52553.1|1882581_1884372_-	PAS domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	36.2	3.0e-37
AVD52554.1|1884472_1885189_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	40.4	1.2e-45
AVD52555.1|1885371_1886106_-	pseudouridine synthase	NA	NA	NA	NA	NA
AVD52556.1|1886108_1886705_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	30.8	9.3e-12
AVD52557.1|1886701_1887451_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	29.0	2.7e-08
AVD52558.1|1887466_1888777_-	diaminopimelate decarboxylase	NA	NA	NA	NA	NA
AVD52559.1|1888957_1889776_-	purine-nucleoside phosphorylase	NA	Q5YBA4	Grouper_iridovirus	43.5	1.0e-61
AVD52560.1|1889794_1890979_-	phosphopentomutase	NA	NA	NA	NA	NA
AVD52561.1|1891007_1891901_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	32.0	4.9e-41
>prophage 138
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1896004	1903293	2906671	lysis	Lactobacillus_phage(40.0%)	8	NA	NA
AVD52566.1|1896004_1896829_+	Fe(3+)-dicitrate ABC transporter ATP-binding protein	NA	F2Y165	Organic_Lake_phycodnavirus	22.4	8.1e-06
AVD52567.1|1896818_1897817_+	thioredoxin reductase	NA	A0A2K9L4X0	Tupanvirus	29.5	4.3e-17
AVD52568.1|1897832_1898453_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AVD52569.1|1898452_1899268_-	ABC transporter permease	NA	NA	NA	NA	NA
AVD52570.1|1899264_1900152_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.8	1.8e-19
AVD52571.1|1900625_1901183_-	ADP-ribose pyrophosphatase	NA	A0A2K9VCP4	Lactobacillus_phage	32.2	2.2e-15
AVD52572.1|1901456_1902116_+|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	lysis	NA	NA	NA	NA
AVD52573.1|1902093_1903293_+	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	29.1	8.4e-36
>prophage 139
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1906525	1908001	2906671		Cyanophage(100.0%)	1	NA	NA
AVD52576.1|1906525_1908001_+	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	36.4	2.3e-83
>prophage 140
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1912090	1917094	2906671		Yellowstone_lake_phycodnavirus(50.0%)	4	NA	NA
AVD52582.1|1912090_1913812_+	acetolactate synthase, large subunit, biosynthetic type	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	29.4	1.5e-57
AVD52583.1|1913812_1914304_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
AVD52584.1|1914402_1915398_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
AVD52585.1|1915555_1917094_+	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	25.5	1.9e-08
>prophage 141
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1922341	1923643	2906671		Geobacillus_virus(100.0%)	1	NA	NA
AVD52591.1|1922341_1923643_-	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	59.9	3.6e-133
>prophage 142
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1950759	1959948	2906671	tRNA	Lactococcus_phage(33.33%)	8	NA	NA
AVD52615.1|1950759_1950960_-	cold-shock protein CspLB	NA	Q9AZD3	Lactococcus_phage	66.2	1.7e-18
AVD52616.1|1951248_1951944_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AVD52617.1|1951957_1952947_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
AVD52618.1|1953058_1955824_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	28.0	1.0e-89
AVD52619.1|1956106_1956634_-	septum formation initiator	NA	NA	NA	NA	NA
AVD52620.1|1956729_1957251_-	transcription repressor NadR	NA	NA	NA	NA	NA
AVD52621.1|1957255_1958362_-	cysteine desulfurase	NA	NA	NA	NA	NA
AVD52622.1|1958493_1959948_+	L-aspartate oxidase	NA	M1HTN0	Paramecium_bursaria_Chlorella_virus	27.2	2.6e-23
>prophage 143
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	1992873	2002276	2906671		uncultured_Mediterranean_phage(50.0%)	11	NA	NA
AVD52655.1|1992873_1995114_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	34.6	3.1e-140
AVD52656.1|1995156_1996197_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52657.1|1996215_1996698_-	phosphopantetheine adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	43.5	2.4e-26
AVD52658.1|1996700_1997258_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
AVD52659.1|1997354_1997636_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52660.1|1997666_1998116_-	regulator	NA	NA	NA	NA	NA
AVD52661.1|1998163_1999219_-	CAP domain-containing protein	NA	A0A0E3T7R5	Bacillus_phage	34.9	1.9e-15
AVD52662.1|1999262_1999442_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52663.1|1999366_2000272_-	protoheme IX farnesyltransferase	NA	NA	NA	NA	NA
AVD52664.1|2000507_2001425_+	heme A synthase	NA	NA	NA	NA	NA
AVD52665.1|2001532_2002276_+	ion transporter	NA	A0A1B0Y2S3	Lactobacillus_phage	32.7	6.2e-13
>prophage 144
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2006907	2016700	2906671	tRNA,protease	uncultured_virus(40.0%)	9	NA	NA
AVD52673.1|2006907_2007885_-	linear amide C-N hydrolase	NA	M1H001	Paramecium_bursaria_Chlorella_virus	30.1	3.9e-23
AVD52674.1|2008139_2009768_-	molecular chaperone GroEL	NA	A0A219YK78	uncultured_virus	57.0	1.8e-158
AVD52675.1|2009801_2010086_-	co-chaperone GroES	NA	A0A221S3C8	uncultured_virus	54.3	9.8e-20
AVD52676.1|2010320_2011007_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AVD52677.1|2011008_2011206_+	DUF4305 domain-containing protein	NA	NA	NA	NA	NA
AVD52678.1|2011239_2011887_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
AVD52679.1|2012196_2014149_+	multidrug ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	29.2	2.2e-57
AVD52680.1|2014173_2015133_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AVD52681.1|2015677_2016700_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	42.0	6.2e-64
>prophage 145
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2028516	2034054	2906671		Moumouvirus(50.0%)	4	NA	NA
AVD52695.1|2028516_2029560_-	lipase	NA	M1PGN2	Moumouvirus	31.8	6.8e-34
AVD52696.1|2029774_2030989_+	argininosuccinate synthase	NA	NA	NA	NA	NA
AVD52697.1|2030992_2032363_+	argininosuccinate lyase	NA	NA	NA	NA	NA
AVD52698.1|2032530_2034054_+	glycine/betaine ABC transporter permease	NA	A0A2I7QNT1	Vibrio_phage	24.6	1.9e-21
>prophage 146
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2040220	2041666	2906671		Streptococcus_phage(100.0%)	1	NA	NA
AVD52706.1|2040220_2041666_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.5	4.9e-22
>prophage 147
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2054165	2058244	2906671		Planktothrix_phage(50.0%)	4	NA	NA
AVD52721.1|2054165_2054933_+	bacitracin ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.0	3.7e-29
AVD52722.1|2054919_2056860_+	ABC transporter permease	NA	NA	NA	NA	NA
AVD52723.1|2056897_2057722_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52724.1|2057782_2058244_+	N-acetyltransferase	NA	E9LUK4	Lactobacillus_phage	40.1	1.2e-19
>prophage 148
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2062214	2063510	2906671		Lactobacillus_phage(100.0%)	1	NA	NA
AVD52728.1|2062214_2063510_-	teichoic acid biosynthesis protein	NA	K4I1Y0	Lactobacillus_phage	29.1	2.4e-12
>prophage 149
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2085240	2086143	2906671		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
AVD52745.1|2085240_2086143_+	sodium ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.3	3.4e-21
>prophage 150
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2095758	2103887	2906671		Listeria_phage(80.0%)	9	NA	NA
AVD52755.1|2095758_2096076_-	nucleotide pyrophosphohydrolase	NA	A0A1S7FYY8	Listeria_phage	58.4	2.2e-28
AVD52756.1|2096274_2096451_+	hypothetical protein	NA	NA	NA	NA	NA
AVD52757.1|2096493_2096793_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
AVD52758.1|2096901_2097228_-	thioredoxin	NA	NA	NA	NA	NA
AVD52759.1|2097224_2097662_-	flavodoxin	NA	A0A060AFY8	Listeria_phage	38.6	1.1e-22
AVD52760.1|2097658_2098708_-	ribonucleotide-diphosphate reductase subunit beta	NA	A0A059T7I4	Listeria_phage	85.1	1.6e-168
AVD52761.1|2098763_2101055_-	ribonucleoside-diphosphate reductase subunit alpha	NA	A0A060AGL6	Listeria_phage	72.8	0.0e+00
AVD52762.1|2101590_2101932_+	hypothetical protein	NA	NA	NA	NA	NA
AVD52763.1|2101985_2103887_-	alkyl/aryl-sulfatase	NA	A0A2P0VMX1	Tetraselmis_virus	46.3	1.7e-155
>prophage 151
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2111602	2112220	2906671		Streptococcus_phage(100.0%)	1	NA	NA
AVD53585.1|2111602_2112220_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	46.2	5.4e-47
>prophage 152
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2118423	2119497	2906671		Bacillus_phage(100.0%)	1	NA	NA
AVD52779.1|2118423_2119497_-	hypothetical protein	NA	A0A127AWB9	Bacillus_phage	38.0	2.6e-20
>prophage 153
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2135216	2137277	2906671		Listeria_phage(50.0%)	3	NA	NA
AVD52786.1|2135216_2135693_-	hypothetical protein	NA	A0A059T5F1	Listeria_phage	48.7	1.2e-33
AVD52787.1|2135753_2136494_-	SrtB family sortase	NA	NA	NA	NA	NA
AVD52788.1|2136497_2137277_-	iron ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.9	1.1e-17
>prophage 154
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2142313	2149075	2906671		Streptococcus_phage(33.33%)	6	NA	NA
AVD52794.1|2142313_2144119_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	28.9	8.1e-67
AVD52795.1|2144191_2145307_-	competence protein CoiA	NA	NA	NA	NA	NA
AVD52796.1|2145432_2146086_-	adaptor protein MecA	NA	NA	NA	NA	NA
AVD52797.1|2146318_2146714_-	transcriptional regulator Spx	NA	NA	NA	NA	NA
AVD52798.1|2147033_2148002_-	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	28.0	8.6e-07
AVD52799.1|2147998_2149075_-	peptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.3	8.4e-19
>prophage 155
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2158841	2163950	2906671		Brevibacillus_phage(50.0%)	4	NA	NA
AVD52808.1|2158841_2159969_-	GW domain-containing glycosaminoglycan-binding protein	NA	S5M633	Brevibacillus_phage	45.5	8.2e-25
AVD52809.1|2160291_2160480_+	DUF2929 domain-containing protein	NA	NA	NA	NA	NA
AVD52810.1|2160569_2161259_-	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
AVD52811.1|2161349_2163950_-	chaperone protein ClpB	NA	K4FB40	Cronobacter_phage	37.8	3.0e-123
>prophage 156
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2171060	2172396	2906671		Staphylococcus_phage(50.0%)	2	NA	NA
AVD52819.1|2171060_2171813_-	multidrug ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.5	5.8e-27
AVD52820.1|2171973_2172396_+	HIT family protein	NA	B5LJ12	Mycobacterium_phage	33.6	9.9e-08
>prophage 157
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2179632	2179986	2906671		Streptococcus_phage(100.0%)	1	NA	NA
AVD52826.1|2179632_2179986_-	YlbF family regulator	NA	A0A1X9I5Y8	Streptococcus_phage	32.4	3.1e-07
>prophage 158
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2183532	2184438	2906671		Staphylococcus_phage(100.0%)	1	NA	NA
AVD52830.1|2183532_2184438_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	39.2	1.0e-30
>prophage 159
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2200171	2204195	2906671		Acanthamoeba_polyphaga_mimivirus(33.33%)	6	NA	NA
AVD52844.1|2200171_2200654_-	cysteine methyltransferase	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	46.2	6.4e-19
AVD52845.1|2200799_2201360_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AVD52846.1|2201381_2202251_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
AVD52847.1|2202263_2202656_-	hypothetical protein	NA	V5UQY3	Oenococcus_phage	51.2	7.0e-32
AVD52848.1|2202657_2203314_-	DNA alkylation repair protein	NA	NA	NA	NA	NA
AVD52849.1|2203310_2204195_-	aldo/keto reductase	NA	A0A1V0SDE7	Indivirus	32.1	8.6e-30
>prophage 160
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2207858	2211946	2906671		Planktothrix_phage(33.33%)	4	NA	NA
AVD52854.1|2207858_2208584_+	glutamine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.0	3.4e-32
AVD53590.1|2208659_2209808_+	aspartate aminotransferase	NA	NA	NA	NA	NA
AVD52855.1|2209851_2210481_-	haloacid dehalogenase	NA	G3MA51	Bacillus_virus	33.3	4.0e-05
AVD52856.1|2210653_2211946_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	32.9	1.2e-48
>prophage 161
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2219415	2223123	2906671		Bacillus_phage(100.0%)	1	NA	NA
AVD52869.1|2219415_2223123_-	ATP-dependent helicase/nuclease subunit A	NA	A7KV33	Bacillus_phage	22.2	1.2e-21
>prophage 162
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2227897	2228245	2906671		Clostridium_phage(100.0%)	1	NA	NA
AVD52873.1|2227897_2228245_-	XRE family transcriptional regulator	NA	A0A0A7RTK4	Clostridium_phage	40.7	9.9e-06
>prophage 163
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2232140	2233466	2906671		Phaeocystis_globosa_virus(100.0%)	1	NA	NA
AVD52877.1|2232140_2233466_+	aminopeptidase C	NA	R4TV59	Phaeocystis_globosa_virus	38.2	3.5e-83
>prophage 164
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2239490	2240270	2906671		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
AVD52885.1|2239490_2240270_-	amino acid ABC transporter ATP-binding protein	NA	M1HV27	Acanthocystis_turfacea_Chlorella_virus	23.1	4.1e-07
>prophage 165
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2248494	2249736	2906671		Staphylococcus_phage(100.0%)	1	NA	NA
AVD52894.1|2248494_2249736_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	36.1	2.1e-61
>prophage 166
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2274159	2277906	2906671		Planktothrix_phage(50.0%)	5	NA	NA
AVD52910.1|2274159_2274840_+	hemin ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.2	1.8e-35
AVD52911.1|2274882_2275197_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
AVD52912.1|2275441_2276803_+	aspartate kinase	NA	NA	NA	NA	NA
AVD52913.1|2276844_2277240_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52914.1|2277321_2277906_-	peptidylprolyl isomerase	NA	A0A076FI46	Aureococcus_anophage	40.3	2.4e-28
>prophage 167
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2291388	2292384	2906671		Streptococcus_phage(100.0%)	1	NA	NA
AVD52928.1|2291388_2292384_+	Ferredoxin--NADP reductase 2	NA	Q9JRK7	Streptococcus_phage	60.5	6.1e-40
>prophage 168
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2297708	2298209	2906671		Bacillus_virus(100.0%)	1	NA	NA
AVD52934.1|2297708_2298209_+	phosphatidylglycerophosphatase A	NA	G3MBC5	Bacillus_virus	54.8	6.8e-40
>prophage 169
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2303892	2310515	2906671		Golden_Marseillevirus(25.0%)	7	NA	NA
AVD52942.1|2303892_2304735_-	DUF72 domain-containing protein	NA	A0A1D6Y809	Golden_Marseillevirus	28.2	1.0e-16
AVD52943.1|2304876_2305191_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52944.1|2305325_2306720_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
AVD52945.1|2306742_2307186_-	SUF system NifU family Fe-S cluster assembly protein	NA	A0A2P1CJL8	Mycobacterium_phage	35.8	1.6e-13
AVD52946.1|2307182_2308409_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	48.2	1.1e-115
AVD52947.1|2308409_2309711_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
AVD52948.1|2309729_2310515_-	Fe-S cluster assembly ATPase SufC	NA	A0A285PWH2	Cedratvirus	28.1	2.1e-11
>prophage 170
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2313538	2322764	2906671		Bacillus_phage(40.0%)	11	NA	NA
AVD52952.1|2313538_2314561_-	methionine import ATP-binding protein MetN 2	NA	G3M9Y6	Bacillus_virus	33.8	8.5e-29
AVD52953.1|2314877_2315066_-	hypothetical protein	NA	NA	NA	NA	NA
AVD52954.1|2315144_2316287_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	25.4	6.6e-22
AVD52955.1|2316276_2316972_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	42.3	2.5e-40
AVD52956.1|2317046_2317922_-	cation transporter	NA	NA	NA	NA	NA
AVD52957.1|2318113_2318398_-	thioredoxin	NA	NA	NA	NA	NA
AVD52958.1|2318482_2318860_-	glycine cleavage system protein H	NA	NA	NA	NA	NA
AVD52959.1|2318900_2319254_-	hypothetical protein	NA	M1PLC0	Streptococcus_phage	56.0	2.5e-28
AVD52960.1|2319410_2320586_-	rod shape-determining protein RodA	NA	NA	NA	NA	NA
AVD52961.1|2320661_2321831_-	rod shape-determining protein RodA	NA	NA	NA	NA	NA
AVD52962.1|2321972_2322764_-	ABC transporter ATP-binding protein	NA	A0A1V0SJ29	Klosneuvirus	30.0	1.1e-15
>prophage 171
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2330082	2331791	2906671		Paenibacillus_phage(50.0%)	3	NA	NA
AVD52972.1|2330082_2330424_+	DUF1093 domain-containing protein	NA	A0A0K2CYS5	Paenibacillus_phage	40.7	6.1e-08
AVD52973.1|2330455_2330839_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AVD52974.1|2330894_2331791_-	YafY family transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	27.7	2.7e-07
>prophage 172
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2344511	2347373	2906671		Staphylococcus_phage(50.0%)	2	NA	NA
AVD52982.1|2344511_2344976_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	68.1	1.6e-51
AVD52983.1|2344991_2347373_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	41.4	2.7e-94
>prophage 173
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2350785	2352078	2906671		Streptococcus_phage(100.0%)	1	NA	NA
AVD52988.1|2350785_2352078_-	enolase	NA	W6LP63	Streptococcus_phage	71.7	1.3e-172
>prophage 174
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2364409	2367182	2906671	protease	Brevibacillus_phage(33.33%)	3	NA	NA
AVD52999.1|2364409_2364745_+	hypothetical protein	NA	S5MNN8	Brevibacillus_phage	76.1	2.3e-15
AVD53000.1|2364992_2366429_-	chitin-binding protein	NA	A0A0K1Y848	Apis_mellifera_filamentous_virus	37.8	3.6e-25
AVD53001.1|2366585_2367182_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.4	6.6e-58
>prophage 175
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2371100	2378945	2906671		Streptococcus_phage(50.0%)	7	NA	NA
AVD53005.1|2371100_2372072_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
AVD53006.1|2372079_2373048_-	hypothetical protein	NA	A1IMD5	Streptococcus_phage	43.3	3.9e-68
AVD53007.1|2373049_2373925_-	RNase adaptor protein RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
AVD53008.1|2374032_2375763_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.1	9.5e-174
AVD53009.1|2375804_2376866_-	galactose-1-epimerase	NA	NA	NA	NA	NA
AVD53010.1|2376882_2377866_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	38.1	4.0e-52
AVD53011.1|2377985_2378945_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
>prophage 176
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2387160	2390031	2906671		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
AVD53021.1|2387160_2390031_-	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	58.7	0.0e+00
>prophage 177
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2393686	2396541	2906671		Bacillus_virus(66.67%)	4	NA	NA
AVD53026.1|2393686_2393992_-	ArsR family transcriptional regulator	NA	A0A218MNF3	uncultured_virus	40.6	9.6e-05
AVD53027.1|2394259_2394919_-	phosphate transport system regulatory protein PhoU	NA	NA	NA	NA	NA
AVD53028.1|2394931_2395711_-	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.2	2.4e-15
AVD53594.1|2395725_2396541_-	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.1	1.9e-15
>prophage 178
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2399630	2411790	2906671	protease	Bacillus_phage(28.57%)	10	NA	NA
AVD53031.1|2399630_2401406_-	PAS domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	36.0	1.9e-36
AVD53032.1|2401405_2402116_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	40.1	2.8e-39
AVD53033.1|2402266_2403442_-|protease	serine protease	protease	NA	NA	NA	NA
AVD53034.1|2403469_2404918_-	cardiolipin synthase	NA	NA	NA	NA	NA
AVD53035.1|2405041_2406352_-	peptidase	NA	G9BW84	Planktothrix_phage	35.5	6.6e-10
AVD53036.1|2406471_2407677_-	peptidase P60	NA	A0A0K0NL58	Gordonia_phage	40.7	1.2e-05
AVD53037.1|2407752_2408637_-	cell division protein FtsX	NA	NA	NA	NA	NA
AVD53038.1|2408626_2409313_-	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	30.2	6.5e-25
AVD53039.1|2409819_2410683_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	34.5	1.2e-39
AVD53040.1|2410688_2411790_-	peptide chain release factor 2	NA	A0A0S4KWG0	Pseudomonas_phage	38.7	3.2e-05
>prophage 179
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2416025	2420119	2906671		Streptococcus_phage(66.67%)	5	NA	NA
AVD53044.1|2416025_2417345_-	DNA/RNA helicase	NA	A0A1X9I5S6	Streptococcus_phage	37.4	2.5e-73
AVD53596.1|2417337_2417529_+	hypothetical protein	NA	NA	NA	NA	NA
AVD53045.1|2417540_2418392_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	37.9	6.8e-16
AVD53046.1|2418412_2419099_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AVD53047.1|2419483_2420119_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	45.9	3.2e-42
>prophage 180
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2424983	2426573	2906671		Bacillus_phage(50.0%)	2	NA	NA
AVD53053.1|2424983_2425817_-	peptidase M23	NA	A0A217ER34	Bacillus_phage	60.4	1.3e-22
AVD53054.1|2426207_2426573_-	single-stranded DNA-binding protein	NA	Q0ILF5	Lactococcus_phage	47.9	6.3e-27
>prophage 181
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2440031	2445663	2906671		Aeromonas_phage(33.33%)	6	NA	NA
AVD53070.1|2440031_2441273_-	serine hydroxymethyltransferase	NA	A0A240F2Y9	Aeromonas_phage	53.1	1.3e-100
AVD53071.1|2441408_2441816_-	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
AVD53072.1|2441812_2442850_-	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	41.7	6.3e-64
AVD53073.1|2443150_2444002_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AVD53074.1|2443988_2445065_-	peptide chain release factor 1	NA	NA	NA	NA	NA
AVD53075.1|2445087_2445663_-	thymidine kinase	NA	A0A0A0Q2F0	Pectobacterium_bacteriophage	51.9	2.3e-47
>prophage 182
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2457511	2462712	2906671		Catovirus(33.33%)	3	NA	NA
AVD53087.1|2457511_2458432_-	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	28.5	6.9e-22
AVD53088.1|2458748_2461061_+	GW domain-containing glycosaminoglycan-binding protein	NA	A0A288WFW6	Bacillus_phage	39.4	7.0e-23
AVD53089.1|2461113_2462712_-	CTP synthetase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.2	3.8e-153
>prophage 183
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2467119	2468442	2906671		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
AVD53095.1|2467119_2468442_-	hypothetical protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	32.8	1.7e-29
>prophage 184
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2478954	2482843	2906671		Bacillus_phage(66.67%)	4	NA	NA
AVD53109.1|2478954_2479623_-	hemin ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.6	5.0e-38
AVD53110.1|2479622_2480711_-	ABC transporter permease	NA	NA	NA	NA	NA
AVD53111.1|2480789_2482169_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	44.3	1.5e-57
AVD53112.1|2482165_2482843_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	48.6	3.4e-58
>prophage 185
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2498147	2500566	2906671		Brevibacillus_phage(50.0%)	2	NA	NA
AVD53120.1|2498147_2499674_+	GW domain-containing glycosaminoglycan-binding protein	NA	A0A0K2CP65	Brevibacillus_phage	48.7	6.9e-27
AVD53121.1|2499714_2500566_-	2,5-diketo-D-gluconic acid reductase	NA	A0A2H4PQR8	Staphylococcus_phage	38.0	2.0e-47
>prophage 186
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2504211	2506342	2906671		Lactococcus_phage(50.0%)	2	NA	NA
AVD53599.1|2504211_2506065_-	DNA adenine methylase	NA	A0A0D3MSW0	Lactococcus_phage	39.2	6.2e-46
AVD53126.1|2506123_2506342_-	transcriptional regulator	NA	S5MNP8	Brevibacillus_phage	44.1	9.2e-10
>prophage 187
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2511539	2517721	2906671	tRNA,integrase	uncultured_Caudovirales_phage(25.0%)	8	2502797:2502813	2512647:2512663
2502797:2502813	attL	TATTAACGTTTTGAGAA	NA	NA	NA	NA
AVD53131.1|2511539_2512580_+|integrase	site-specific integrase	integrase	A0A2H4JGN1	uncultured_Caudovirales_phage	27.8	3.3e-20
AVD53132.1|2512648_2513041_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
2512647:2512663	attR	TATTAACGTTTTGAGAA	NA	NA	NA	NA
AVD53133.1|2513062_2513500_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
AVD53134.1|2513694_2514441_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AVD53135.1|2514446_2515244_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
AVD53136.1|2515246_2516113_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	25.5	1.5e-10
AVD53137.1|2516088_2516928_-	energy-coupling factor transporter ATPase	NA	W8CYL7	Bacillus_phage	32.1	1.2e-17
AVD53138.1|2517058_2517721_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	47.8	6.1e-20
>prophage 188
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2542363	2543344	2906671		Indivirus(100.0%)	1	NA	NA
AVD53178.1|2542363_2543344_+	heptaprenyl diphosphate synthase	NA	A0A1V0SE37	Indivirus	24.0	5.5e-09
>prophage 189
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2553598	2556982	2906671		Klosneuvirus(50.0%)	2	NA	NA
AVD53189.1|2553598_2554786_-	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	26.7	1.2e-13
AVD53190.1|2554894_2556982_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	27.8	1.0e-65
>prophage 190
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2565739	2567825	2906671		Tupanvirus(50.0%)	2	NA	NA
AVD53201.1|2565739_2566771_-	sorbitol dehydrogenase	NA	A0A2K9L7I1	Tupanvirus	30.7	1.3e-16
AVD53202.1|2566772_2567825_-	galactitol-1-phosphate 5-dehydrogenase	NA	E3SJ82	Synechococcus_phage	24.1	2.2e-11
>prophage 191
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2576574	2584716	2906671		Bacillus_phage(25.0%)	6	NA	NA
AVD53214.1|2576574_2577831_+	excinuclease ABC subunit A	NA	O64031	Bacillus_phage	42.3	6.9e-81
AVD53215.1|2577832_2578645_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AVD53216.1|2578685_2579381_-	DNA-binding response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	29.1	3.4e-05
AVD53217.1|2579377_2582068_-	sensor histidine kinase KdpD	NA	Q8QKV7	Ectocarpus_siliculosus_virus	26.4	2.3e-09
AVD53218.1|2582083_2582656_-	potassium-transporting ATPase C chain	NA	NA	NA	NA	NA
AVD53219.1|2582670_2584716_-	potassium-transporting ATPase subunit B	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	25.1	3.2e-27
>prophage 192
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2591109	2598032	2906671		Acanthocystis_turfacea_Chlorella_virus(33.33%)	5	NA	NA
AVD53227.1|2591109_2593680_-	magnesium-translocating P-type ATPase	NA	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	26.3	3.1e-43
AVD53228.1|2594233_2594800_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AVD53229.1|2594961_2596737_+	autolysin	NA	Q9ZXE4	Bacillus_phage	42.1	2.0e-17
AVD53230.1|2596967_2597297_-	hypothetical protein	NA	NA	NA	NA	NA
AVD53231.1|2597405_2598032_-	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	47.5	4.2e-47
>prophage 193
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2604137	2608077	2906671		Klosneuvirus(50.0%)	5	NA	NA
AVD53239.1|2604137_2604980_+	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	26.9	6.1e-25
AVD53240.1|2605025_2605271_-	DUF2508 domain-containing protein	NA	NA	NA	NA	NA
AVD53241.1|2605285_2605882_-	recombination protein RecR	NA	NA	NA	NA	NA
AVD53242.1|2605990_2606308_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
AVD53243.1|2606337_2608077_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.9	9.6e-57
>prophage 194
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2616375	2619839	2906671		Bacillus_phage(50.0%)	2	NA	NA
AVD53253.1|2616375_2618115_-	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	26.3	1.8e-23
AVD53254.1|2618114_2619839_-	thiol reductant ABC exporter subunit CydD	NA	A0A2H4UU96	Bodo_saltans_virus	33.2	1.2e-19
>prophage 195
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2623291	2624869	2906671		Staphylococcus_phage(100.0%)	1	NA	NA
AVD53258.1|2623291_2624869_+	acyl--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	36.9	2.4e-83
>prophage 196
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2639657	2657878	2906671	tRNA	Bacillus_phage(33.33%)	17	NA	NA
AVD53274.1|2639657_2640791_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	37.2	3.0e-43
AVD53275.1|2640795_2641752_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AVD53276.1|2641819_2643154_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
AVD53277.1|2643271_2643961_-	NAD-dependent protein deacetylase	NA	A0A068EPD4	Bacillus_phage	31.1	4.7e-23
AVD53278.1|2643953_2644244_-	Mitomycin resistance protein mcrB	NA	NA	NA	NA	NA
AVD53279.1|2644233_2645442_-	multidrug transporter MdtG	NA	NA	NA	NA	NA
AVD53280.1|2645558_2645906_-	hypothetical protein	NA	NA	NA	NA	NA
AVD53281.1|2645924_2646569_-	fructose-6-phosphate aldolase	NA	H8ZMU3	Synechococcus_phage	47.7	1.8e-48
AVD53282.1|2646710_2647400_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
AVD53283.1|2647729_2649457_+	multidrug ABC transporter permease	NA	W8CYL7	Bacillus_phage	53.3	4.3e-150
AVD53284.1|2649510_2649762_-	competence protein TfoX	NA	NA	NA	NA	NA
AVD53285.1|2649781_2651065_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.7	3.8e-95
AVD53286.1|2651398_2651818_-	general stress protein	NA	NA	NA	NA	NA
AVD53287.1|2651947_2652520_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	45.8	2.9e-42
AVD53288.1|2652516_2654223_+	aminodeoxychorismate synthase, component I	NA	S4VT78	Pandoravirus	32.3	3.6e-48
AVD53289.1|2654384_2656106_+	multidrug ABC transporter ATP-binding protein	NA	A0A076FI99	Aureococcus_anophage	23.4	3.0e-10
AVD53290.1|2656105_2657878_+	multidrug ABC transporter permease	NA	W8CYL7	Bacillus_phage	30.0	4.0e-50
>prophage 197
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2664241	2674276	2906671		Tupanvirus(33.33%)	8	NA	NA
AVD53295.1|2664241_2666395_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	33.8	2.0e-43
AVD53296.1|2666418_2668191_-	DNA helicase RecQ	NA	A0A2K9L3P7	Tupanvirus	37.3	1.4e-79
AVD53297.1|2668351_2669818_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.0	8.0e-97
AVD53298.1|2669841_2669976_+	restriction endonuclease	NA	NA	NA	NA	NA
AVD53299.1|2670105_2670636_-	O-acetyl-ADP-ribose deacetylase	NA	A0A0K1L687	Scale_drop_disease_virus	49.3	2.8e-28
AVD53300.1|2670693_2672304_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.9	6.4e-47
AVD53301.1|2672485_2672794_+	hypothetical protein	NA	NA	NA	NA	NA
AVD53302.1|2672821_2674276_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	30.3	1.9e-50
>prophage 198
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2679968	2680856	2906671		Amsacta_moorei_entomopoxvirus(100.0%)	1	NA	NA
AVD53310.1|2679968_2680856_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	26.6	1.5e-13
>prophage 199
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2687990	2688614	2906671		Planktothrix_phage(100.0%)	1	NA	NA
AVD53316.1|2687990_2688614_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	1.0e-21
>prophage 200
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2701742	2707480	2906671		Bifidobacterium_phage(50.0%)	7	NA	NA
AVD53328.1|2701742_2703209_-	catalase	NA	A0A2K9L572	Tupanvirus	48.0	6.3e-110
AVD53602.1|2703357_2703561_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
AVD53329.1|2703567_2704419_-	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	34.0	6.0e-20
AVD53330.1|2704411_2705173_-	sporulation initiation inhibitor Soj	NA	Q8JL10	Natrialba_phage	29.0	4.4e-22
AVD53331.1|2705397_2706156_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AVD53332.1|2706314_2706614_-	hypothetical protein	NA	NA	NA	NA	NA
AVD53333.1|2706625_2707480_-	nucleoid occlusion protein	NA	I3NLC2	Bifidobacterium_phage	31.6	4.9e-14
>prophage 201
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2721787	2722606	2906671		Stx2-converting_phage(100.0%)	1	NA	NA
AVD53349.1|2721787_2722606_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	32.9	1.6e-17
>prophage 202
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2737151	2747082	2906671		Streptococcus_phage(42.86%)	10	NA	NA
AVD53361.1|2737151_2738339_-	3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	54.2	2.8e-116
AVD53362.1|2738331_2739423_-	phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	60.8	1.3e-120
AVD53363.1|2739793_2740942_-	MFS transporter	NA	NA	NA	NA	NA
AVD53364.1|2740955_2741378_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AVD53365.1|2741480_2741834_-	hypothetical protein	NA	A0A1S7FZ87	Listeria_phage	42.4	8.5e-13
AVD53366.1|2742027_2742627_+	nitroreductase	NA	NA	NA	NA	NA
AVD53367.1|2742684_2743005_-	thioredoxin	NA	A0A0K2FIM3	Achromobacter_phage	32.2	1.6e-10
AVD53368.1|2743127_2743790_-	beta-phosphoglucomutase	NA	M1I080	Acanthocystis_turfacea_Chlorella_virus	27.5	5.3e-08
AVD53369.1|2743786_2744908_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	49.6	1.0e-67
AVD53370.1|2744904_2747082_-	glycoside hydrolase family 65 protein	NA	A0A2P0VNC6	Tetraselmis_virus	25.6	2.7e-08
>prophage 203
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2759040	2760453	2906671		Mycobacterium_phage(100.0%)	1	NA	NA
AVD53381.1|2759040_2760453_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	27.7	1.1e-29
>prophage 204
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2772133	2780859	2906671		Bacillus_virus(50.0%)	6	NA	NA
AVD53395.1|2772133_2773279_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	25.7	1.7e-25
AVD53396.1|2773386_2774730_+	MATE family efflux transporter	NA	NA	NA	NA	NA
AVD53604.1|2774909_2775131_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	45.6	2.6e-07
AVD53397.1|2775134_2776247_+	DNA replication and repair protein RecF	NA	NA	NA	NA	NA
AVD53398.1|2776295_2778236_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	45.4	6.1e-145
AVD53399.1|2778330_2780859_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	37.5	2.2e-110
>prophage 205
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2805051	2810882	2906671		Staphylococcus_phage(33.33%)	8	NA	NA
AVD53426.1|2805051_2805636_-	multidrug ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.4	2.9e-26
AVD53427.1|2805695_2806418_-	DUF2705 domain-containing protein	NA	NA	NA	NA	NA
AVD53428.1|2806419_2807133_-	hypothetical protein	NA	NA	NA	NA	NA
AVD53429.1|2807119_2807884_-	hypothetical protein	NA	NA	NA	NA	NA
AVD53430.1|2807954_2808404_-	hypothetical protein	NA	NA	NA	NA	NA
AVD53431.1|2808625_2808964_+	DUF4064 domain-containing protein	NA	A0A0S2MVJ2	Bacillus_phage	32.7	2.1e-05
AVD53432.1|2809000_2809810_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
AVD53433.1|2809826_2810882_-	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	26.9	8.7e-21
>prophage 206
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2817140	2822869	2906671		Acanthocystis_turfacea_Chlorella_virus(66.67%)	5	NA	NA
AVD53438.1|2817140_2818166_+	putrescine carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	26.1	8.2e-16
AVD53439.1|2818238_2819624_+	APC family permease	NA	NA	NA	NA	NA
AVD53440.1|2819610_2820705_+	agmatine deiminase	NA	M1HES8	Acanthocystis_turfacea_Chlorella_virus	53.5	3.5e-113
AVD53441.1|2820717_2821659_+	carbamate kinase	NA	NA	NA	NA	NA
AVD53442.1|2821759_2822869_+	agmatine deiminase	NA	M1HI51	Acanthocystis_turfacea_Chlorella_virus	52.7	7.3e-111
>prophage 207
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2826366	2826903	2906671		Listeria_phage(100.0%)	1	NA	NA
AVD53447.1|2826366_2826903_+	Single-stranded DNA-binding protein 1	NA	A8ATZ7	Listeria_phage	66.3	1.2e-53
>prophage 208
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2830375	2836620	2906671		uncultured_Caudovirales_phage(33.33%)	5	NA	NA
AVD53453.1|2830375_2831104_+	DNA-binding response regulator	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	29.2	6.0e-29
AVD53454.1|2831270_2833244_+	cyclic-di-AMP phosphodiesterase PdeA	NA	NA	NA	NA	NA
AVD53455.1|2833246_2833693_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
AVD53456.1|2833717_2835070_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	54.2	1.0e-122
AVD53457.1|2835327_2836620_+	adenylosuccinate synthetase	NA	G5CQQ4	Megavirus	36.3	4.9e-66
>prophage 209
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2842576	2847396	2906671		Mycobacterium_phage(50.0%)	2	NA	NA
AVD53463.1|2842576_2847073_+	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	23.5	2.4e-35
AVD53464.1|2847078_2847396_+	DUF4176 domain-containing protein	NA	A0A1X9I6T6	Streptococcus_phage	40.4	1.0e-12
>prophage 210
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2860881	2861838	2906671		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
AVD53486.1|2860881_2861838_+	hydroxyacid dehydrogenase	NA	M1H502	Paramecium_bursaria_Chlorella_virus	29.6	1.6e-29
>prophage 211
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2890712	2897529	2906671		Bacillus_phage(66.67%)	4	NA	NA
AVD53512.1|2890712_2892983_+	chitinase	NA	A0A2K9L3D4	Tupanvirus	32.1	5.8e-38
AVD53513.1|2893085_2893988_+	ROK family protein	NA	NA	NA	NA	NA
AVD53514.1|2894012_2895794_-	multidrug ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.8	2.3e-53
AVD53515.1|2895786_2897529_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.1	3.1e-55
>prophage 212
CP026043	Listeria monocytogenes strain CFSAN006122 chromosome, complete genome	2906671	2901352	2904413	2906671	tail	Listeria_phage(50.0%)	6	NA	NA
AVD53520.1|2901352_2901805_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
AVD53521.1|2901810_2902146_-	transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
AVD53522.1|2902362_2902791_+	hypothetical protein	NA	NA	NA	NA	NA
AVD53523.1|2902802_2903219_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	38.6	1.3e-20
AVD53524.1|2903498_2903888_+	DUF5072 domain-containing protein	NA	NA	NA	NA	NA
AVD53525.1|2903900_2904413_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	63.4	6.9e-48
