assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_001183705.3_ASM118370v3	CP012119	Staphylococcus aureus subsp. aureus strain USA300_2014.C01 chromosome, complete genome	1	62745-63027	1	CRT	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	AAAGNCAGCTNNNNANANNNTGCAAGTTGG	30	2	6	62775-62800|62775-62800|62775-62800|62775-62800|62889-62914|62889-62914	CP012119.2_62719-62744|CP012119.2_1982155-1982130|CP012119.2_1982211-1982186|CP012119.2_2837488-2837513|CP012119.2_2874631-2874606|CP012119.2_2418336-2418361	NA	4	4	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA	NA|499aa|up_9|CP012119.2_51633_53130_-	PRK07691, PRK07691, putative monovalent cation/H+ antiporter subunit D; Reviewed	NA|110aa|up_8|CP012119.2_53122_53452_-	PRK08600, PRK08600, putative monovalent cation/H+ antiporter subunit C; Reviewed	NA|143aa|up_7|CP012119.2_53463_53892_-	PRK12573, PRK12573, Na(+)/H(+) antiporter subunit B	NA|802aa|up_6|CP012119.2_53884_56290_-	PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A; Reviewed	NA|128aa|up_5|CP012119.2_56420_56804_-	pfam08810, KapB, Kinase associated protein B	NA|198aa|up_4|CP012119.2_56867_57461_+	cd01927, cyclophilin_WD40, cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain	NA|126aa|up_3|CP012119.2_57876_58254_+	COG1098, VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis]	NA|376aa|up_2|CP012119.2_58615_59743_+	cd04735, OYE_like_4_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 4	NA|397aa|up_1|CP012119.2_60050_61241_+	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional	NA|415aa|up_0|CP012119.2_61349_62594_+	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]	NA|310aa|down_0|CP012119.2_63096_64026_-	cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins	NA|460aa|down_1|CP012119.2_64267_65647_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|402aa|down_2|CP012119.2_65636_66842_-	PRK00509, PRK00509, argininosuccinate synthase; Provisional	NA|444aa|down_3|CP012119.2_67192_68524_+	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional	NA|192aa|down_4|CP012119.2_68848_69424_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|175aa|down_5|CP012119.2_69428_69953_+	TIGR02227, Inactive_signal_peptidase_IA	NA|192aa|down_6|CP012119.2_69968_70544_+	TIGR02227, Inactive_signal_peptidase_IA	NA|1159aa|down_7|CP012119.2_70703_74180_+	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit	NA|1218aa|down_8|CP012119.2_74180_77834_+	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|301aa|down_9|CP012119.2_77999_78902_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]
GCA_001183705.3_ASM118370v3	CP012119	Staphylococcus aureus subsp. aureus strain USA300_2014.C01 chromosome, complete genome	2	196418-196505	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCCCTAACAACTAAAAGTTGTAAGG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|40aa|up_0|CP012119.2_196294_196414_+,NA|45aa|down_0|CP012119.2_196514_196649_-,NA|432aa|down_1|CP012119.2_196800_198096_+,NA|68aa|down_2|CP012119.2_198116_198320_-	NA|730aa|up_9|CP012119.2_184872_187062_+	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|495aa|up_8|CP012119.2_187040_188525_+	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional	NA|343aa|up_7|CP012119.2_188517_189546_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|189aa|up_6|CP012119.2_189548_190115_+	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]	NA|493aa|up_5|CP012119.2_190129_191608_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|416aa|up_4|CP012119.2_191629_192877_+	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional	NA|269aa|up_3|CP012119.2_193141_193948_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|467aa|up_2|CP012119.2_193940_195341_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|192aa|up_1|CP012119.2_195355_195931_-	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]	NA|40aa|up_0|CP012119.2_196294_196414_+	NA	NA|45aa|down_0|CP012119.2_196514_196649_-	NA	NA|432aa|down_1|CP012119.2_196800_198096_+	NA	NA|68aa|down_2|CP012119.2_198116_198320_-	NA	NA|391aa|down_3|CP012119.2_198520_199693_+	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|181aa|down_4|CP012119.2_199746_200289_+	pfam05128, DUF697, Domain of unknown function (DUF697)	NA|89aa|down_5|CP012119.2_200442_200709_+	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|573aa|down_6|CP012119.2_200711_202430_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|78aa|down_7|CP012119.2_202666_202900_-	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|454aa|down_8|CP012119.2_203097_204459_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|340aa|down_9|CP012119.2_204455_205475_+	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]
GCA_001183705.3_ASM118370v3	CP012119	Staphylococcus aureus subsp. aureus strain USA300_2014.C01 chromosome, complete genome	3	1182044-1182122	2	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,DinG,csa3,WYL	Unclear	TGTTGGGGCCCCGCCAACCTGCA	23	1	6	1182067-1182099|1182067-1182099|1182067-1182099|1182067-1182099|1182067-1182099|1182067-1182099	CP012119.2_280781-280749|CP012119.2_488931-488899|CP012119.2_803415-803447|CP012119.2_1816780-1816812|CP012119.2_2874586-2874618|CP012119.2_578182-578214	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|92aa|up_6|CP012119.2_1176238_1176514_+,NA|129aa|up_1|CP012119.2_1180499_1180886_-,NA|138aa|down_1|CP012119.2_1183805_1184219_-,NA|37aa|down_2|CP012119.2_1184247_1184358_-,NA|31aa|down_6|CP012119.2_1187363_1187456_-	NA|419aa|up_9|CP012119.2_1174161_1175418_-	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29)	NA|67aa|up_8|CP012119.2_1175420_1175621_-	COG4840, COG4840, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_7|CP012119.2_1175767_1176232_+	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|92aa|up_6|CP012119.2_1176238_1176514_+	NA	NA|406aa|up_5|CP012119.2_1176791_1178009_+	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair]	NA|210aa|up_4|CP012119.2_1178124_1178754_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|348aa|up_3|CP012119.2_1178743_1179787_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|234aa|up_2|CP012119.2_1179783_1180485_-	COG4758, COG4758, Predicted membrane protein [Function unknown]	NA|129aa|up_1|CP012119.2_1180499_1180886_-	NA	NA|253aa|up_0|CP012119.2_1181102_1181861_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|329aa|down_0|CP012119.2_1182388_1183375_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|138aa|down_1|CP012119.2_1183805_1184219_-	NA	NA|37aa|down_2|CP012119.2_1184247_1184358_-	NA	NA|244aa|down_3|CP012119.2_1184443_1185175_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|438aa|down_4|CP012119.2_1185176_1186490_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|167aa|down_5|CP012119.2_1186781_1187282_+	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]	NA|31aa|down_6|CP012119.2_1187363_1187456_-	NA	DEDDh|185aa|down_7|CP012119.2_1187670_1188225_+	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|357aa|down_8|CP012119.2_1188292_1189363_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|177aa|down_9|CP012119.2_1189609_1190140_-	pfam11667, DUF3267, Putative zincin peptidase
GCA_001183705.3_ASM118370v3	CP012119	Staphylococcus aureus subsp. aureus strain USA300_2014.C01 chromosome, complete genome	4	1416894-1417044	3	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,WYL	Type I-A	AACTTTAGTTGTTAGGGGCTCTTATGCA	28	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|77aa|up_5|CP012119.2_1411765_1411996_-,NA|364aa|up_0|CP012119.2_1415784_1416876_+,NA|35aa|down_0|CP012119.2_1417375_1417480_-,NA|31aa|down_3|CP012119.2_1419591_1419684_+	NA|237aa|up_9|CP012119.2_1407375_1408086_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|CP012119.2_1408206_1408650_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|CP012119.2_1408849_1409263_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|CP012119.2_1409720_1411094_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|CP012119.2_1411765_1411996_-	NA	NA|313aa|up_4|CP012119.2_1412026_1412965_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|CP012119.2_1413399_1414065_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|CP012119.2_1414216_1414537_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|CP012119.2_1414538_1415519_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|CP012119.2_1415784_1416876_+	NA	NA|35aa|down_0|CP012119.2_1417375_1417480_-	NA	NA|68aa|down_1|CP012119.2_1417904_1418108_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|379aa|down_2|CP012119.2_1418166_1419303_-	pfam02037, SAP, SAP domain	NA|31aa|down_3|CP012119.2_1419591_1419684_+	NA	NA|286aa|down_4|CP012119.2_1420388_1421246_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_5|CP012119.2_1421313_1422096_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_6|CP012119.2_1422327_1424133_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_7|CP012119.2_1424813_1426352_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_8|CP012119.2_1426386_1428519_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_9|CP012119.2_1428530_1428965_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]
GCA_001183705.3_ASM118370v3	CP012119	Staphylococcus aureus subsp. aureus strain USA300_2014.C01 chromosome, complete genome	5	1540812-1541005	2	CRT	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TGTTGGGGCCCCGCCAACTTGCA	23	3	13	1540835-1540867|1540835-1540867|1540835-1540867|1540835-1540867|1540835-1540867|1540891-1540926|1540891-1540926|1540891-1540926|1540891-1540926|1540950-1540982|1540950-1540982|1540950-1540982|1540950-1540982	CP012119.2_280781-280749|CP012119.2_488931-488899|CP012119.2_578182-578214|CP012119.2_1816780-1816812|CP012119.2_2874586-2874618|CP012119.2_280728-280693|CP012119.2_981897-981862|CP012119.2_803354-803389|CP012119.2_1192811-1192846|CP012119.2_280781-280749|CP012119.2_488931-488899|CP012119.2_1816780-1816812|CP012119.2_2874586-2874618	NA	3	3	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|55aa|up_9|CP012119.2_1531339_1531504_+,NA|106aa|up_8|CP012119.2_1531748_1532066_+,NA|84aa|up_5|CP012119.2_1537190_1537442_+,NA|57aa|up_0|CP012119.2_1540581_1540752_+,NA	NA|55aa|up_9|CP012119.2_1531339_1531504_+	NA	NA|106aa|up_8|CP012119.2_1531748_1532066_+	NA	NA|1056aa|up_7|CP012119.2_1532252_1535420_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_6|CP012119.2_1535536_1536802_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_5|CP012119.2_1537190_1537442_+	NA	NA|255aa|up_4|CP012119.2_1537433_1538198_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_3|CP012119.2_1538359_1538800_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|CP012119.2_1538792_1540004_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|CP012119.2_1540105_1540456_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|57aa|up_0|CP012119.2_1540581_1540752_+	NA	NA|341aa|down_0|CP012119.2_1541146_1542169_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|CP012119.2_1542188_1542788_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|CP012119.2_1542794_1543028_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|CP012119.2_1543033_1543480_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|CP012119.2_1543493_1543979_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|CP012119.2_1543975_1545235_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|CP012119.2_1545297_1545792_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|CP012119.2_1545793_1546300_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|CP012119.2_1546330_1547335_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|CP012119.2_1547504_1548110_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
GCA_001183705.3_ASM118370v3	CP012119	Staphylococcus aureus subsp. aureus strain USA300_2014.C01 chromosome, complete genome	6	2457003-2457103	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTATGAATTGAGTATTAAATTTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|128aa|up_8|CP012119.2_2449609_2449993_-,NA|98aa|up_6|CP012119.2_2450946_2451240_-,NA|34aa|up_1|CP012119.2_2456227_2456329_+,NA|86aa|up_0|CP012119.2_2456536_2456794_-,NA|221aa|down_1|CP012119.2_2458193_2458856_-,NA|179aa|down_7|CP012119.2_2464947_2465484_-	NA|194aa|up_9|CP012119.2_2448962_2449544_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|128aa|up_8|CP012119.2_2449609_2449993_-	NA	NA|209aa|up_7|CP012119.2_2450247_2450874_-	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|98aa|up_6|CP012119.2_2450946_2451240_-	NA	NA|508aa|up_5|CP012119.2_2451318_2452842_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|190aa|up_4|CP012119.2_2452857_2453427_-	TIGR03137, AhpC, peroxiredoxin	NA|252aa|up_3|CP012119.2_2453918_2454674_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|463aa|up_2|CP012119.2_2454754_2456143_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|34aa|up_1|CP012119.2_2456227_2456329_+	NA	NA|86aa|up_0|CP012119.2_2456536_2456794_-	NA	NA|319aa|down_0|CP012119.2_2457119_2458076_-	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|221aa|down_1|CP012119.2_2458193_2458856_-	NA	NA|136aa|down_2|CP012119.2_2458998_2459406_-	pfam11181, YflT, Heat induced stress protein YflT	NA|193aa|down_3|CP012119.2_2459918_2460497_+	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|423aa|down_4|CP012119.2_2460496_2461765_+	TIGR03173, pbuX, xanthine permease	NA|489aa|down_5|CP012119.2_2461802_2463269_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|514aa|down_6|CP012119.2_2463293_2464835_+	PRK00074, guaA, GMP synthase; Reviewed	NA|179aa|down_7|CP012119.2_2464947_2465484_-	NA	NA|235aa|down_8|CP012119.2_2465876_2466581_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|91aa|down_9|CP012119.2_2466979_2467252_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCA_001183705.3_ASM118370v3	CP012119	Staphylococcus aureus subsp. aureus strain USA300_2014.C01 chromosome, complete genome	7	2698711-2698803	5	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CTAAAGGTGAAGAGGAACGCAGTTGGATGCTA	32	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|36aa|up_4|CP012119.2_2695195_2695303_+,NA|82aa|up_1|CP012119.2_2697476_2697722_-,NA|169aa|down_4|CP012119.2_2702550_2703057_+,NA|239aa|down_5|CP012119.2_2703218_2703935_+	NA|179aa|up_9|CP012119.2_2690546_2691083_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|159aa|up_8|CP012119.2_2691251_2691728_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|432aa|up_7|CP012119.2_2691767_2693063_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|174aa|up_6|CP012119.2_2693090_2693612_+	pfam08741, YwhD, YwhD family	NA|337aa|up_5|CP012119.2_2694110_2695121_+	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional	NA|36aa|up_4|CP012119.2_2695195_2695303_+	NA	NA|128aa|up_3|CP012119.2_2695428_2695812_+	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown]	NA|554aa|up_2|CP012119.2_2695808_2697470_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|82aa|up_1|CP012119.2_2697476_2697722_-	NA	NA|212aa|up_0|CP012119.2_2697857_2698493_+	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|276aa|down_0|CP012119.2_2698931_2699759_+	cd01143, YvrC, Periplasmic binding protein YvrC	NA|317aa|down_1|CP012119.2_2699906_2700857_+	pfam01032, FecCD, FecCD transport family	NA|240aa|down_2|CP012119.2_2700911_2701631_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|267aa|down_3|CP012119.2_2701614_2702415_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|169aa|down_4|CP012119.2_2702550_2703057_+	NA	NA|239aa|down_5|CP012119.2_2703218_2703935_+	NA	NA|263aa|down_6|CP012119.2_2704103_2704892_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|125aa|down_7|CP012119.2_2705142_2705517_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|179aa|down_8|CP012119.2_2707232_2707769_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|168aa|down_9|CP012119.2_2707749_2708253_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
GCA_001183705.3_ASM118370v3	CP012119	Staphylococcus aureus subsp. aureus strain USA300_2014.C01 chromosome, complete genome	9	2917791-2917872	7	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCCCAACTTGCATTGTCTGTAGAA	24	1	2	2917815-2917848|2917815-2917848	CP012119.2_488977-488944|CP012119.2_578136-578169	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|38aa|up_1|CP012119.2_2916693_2916807_+,NA	NA|206aa|up_9|CP012119.2_2911548_2912166_-	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|165aa|up_8|CP012119.2_2912320_2912815_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|141aa|up_7|CP012119.2_2913213_2913636_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_6|CP012119.2_2913783_2914500_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|180aa|up_5|CP012119.2_2914582_2915122_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_4|CP012119.2_2915271_2915592_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_3|CP012119.2_2915735_2916092_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_2|CP012119.2_2916249_2916630_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|38aa|up_1|CP012119.2_2916693_2916807_+	NA	NA|293aa|up_0|CP012119.2_2916808_2917687_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
