The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	165593	171951	2834014	transposase	Staphylococcus_phage(66.67%)	10	NA	NA
AUU43935.1|165593_166829_+|transposase	transposase	transposase	A0A059NT83	Lactococcus_phage	49.1	3.3e-104
AUU43936.1|166840_167608_+	AAA family ATPase	NA	A0A059NT77	Lactococcus_phage	44.6	6.3e-53
AUU43937.1|167920_168172_-	hypothetical protein	NA	NA	NA	NA	NA
AUU43938.1|168172_168346_-	hypothetical protein	NA	NA	NA	NA	NA
AUU43939.1|168300_168405_-	hypothetical protein	NA	NA	NA	NA	NA
AUU43940.1|168916_169102_-	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
AUU43941.1|169529_169640_-	hypothetical protein	NA	NA	NA	NA	NA
AUU43942.1|170340_170547_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	59.7	1.3e-13
AUU43943.1|170840_171065_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	71.0	4.3e-18
AUU43944.1|171753_171951_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	48.4	1.7e-10
>prophage 2
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	432109	440582	2834014		Synechococcus_phage(33.33%)	9	NA	NA
AUU44184.1|432109_432676_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.7	5.5e-30
AUU44185.1|432678_433707_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
AUU44186.1|433699_435184_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
AUU44187.1|435162_437352_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	4.6e-141
AUU44188.1|437344_438016_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
AUU44189.1|438017_438281_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
AUU44190.1|438280_438985_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	41.6	6.2e-47
AUU44191.1|438988_440113_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AUU44192.1|440099_440582_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.0	4.0e-21
>prophage 3
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	459147	513282	2834014	transposase,bacteriocin,protease	Lactococcus_phage(30.0%)	53	NA	NA
AUU44209.1|459147_460212_+|protease	serine protease	protease	A0A2H4PQP7	Staphylococcus_phage	31.7	1.1e-15
AUU44210.1|460293_461475_+|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
AUU44211.1|461512_461842_+	staphostatin B	NA	NA	NA	NA	NA
AUU44212.1|462079_462901_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
AUU44213.1|462893_463697_-	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
AUU44214.1|463683_465357_-	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
AUU46448.1|465343_466555_-	isochorismate synthase	NA	NA	NA	NA	NA
AUU46449.1|466658_466736_-	hypothetical protein	NA	NA	NA	NA	NA
AUU44215.1|466886_467825_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
AUU44216.1|467876_468428_-	N-acetyltransferase	NA	NA	NA	NA	NA
AUU44217.1|468517_468808_+	NINE protein	NA	A0A060AN66	Enterococcus_phage	38.0	5.7e-07
AUU44218.1|468871_469003_+	hypothetical protein	NA	NA	NA	NA	NA
AUU44219.1|470496_470853_+	DoxX family protein	NA	NA	NA	NA	NA
AUU44220.1|470941_471079_-	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
AUU44221.1|471219_471510_+	hypothetical protein	NA	NA	NA	NA	NA
AUU44222.1|471953_472721_-	AAA family ATPase	NA	A0A059NT77	Lactococcus_phage	44.6	6.3e-53
AUU44223.1|472732_473968_-|transposase	transposase	transposase	A0A059NT83	Lactococcus_phage	49.1	3.3e-104
AUU44224.1|474085_474442_-	hypothetical protein	NA	G3M9Y6	Bacillus_virus	40.3	5.0e-05
AUU44225.1|474438_474759_-	hypothetical protein	NA	NA	NA	NA	NA
AUU44226.1|474761_476726_-	DUF1430 domain-containing protein	NA	NA	NA	NA	NA
AUU46450.1|476769_477042_-|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
AUU44227.1|477985_478588_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AUU44228.1|478602_478779_-	DUF2187 domain-containing protein	NA	NA	NA	NA	NA
AUU44229.1|478977_479964_+	lipoate--protein ligase	NA	NA	NA	NA	NA
AUU44230.1|480044_480263_-	IDEAL domain-containing protein	NA	NA	NA	NA	NA
AUU44231.1|480472_481042_+	competence protein ComK	NA	NA	NA	NA	NA
AUU44232.1|481530_483042_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
AUU44233.1|483180_484539_-	Ktr system potassium uptake protein D	NA	NA	NA	NA	NA
AUU44234.1|484555_486880_-	PDZ domain-containing protein	NA	W5SAB9	Pithovirus	27.4	2.8e-11
AUU44235.1|487098_487902_-	hypothetical protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
AUU44236.1|488203_489766_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.7e-36
AUU44237.1|489765_490026_-	hypothetical protein	NA	NA	NA	NA	NA
AUU44238.1|490006_491491_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
AUU44239.1|491923_493099_+	diacylglycerol beta-glucosyltransferase	NA	NA	NA	NA	NA
AUU44240.1|493058_494267_+	MFS transporter	NA	NA	NA	NA	NA
AUU44241.1|494379_494889_-	hypothetical protein	NA	NA	NA	NA	NA
AUU44242.1|495082_495841_-	esterase family protein	NA	NA	NA	NA	NA
AUU44243.1|495985_497554_-	alanine:cation symporter family protein	NA	NA	NA	NA	NA
AUU44244.1|497895_498981_+	AI-2E family transporter	NA	NA	NA	NA	NA
AUU44245.1|499177_499948_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AUU44246.1|500225_502070_-	sodium:proton antiporter	NA	NA	NA	NA	NA
AUU44247.1|502079_503465_-	magnesium transporter	NA	NA	NA	NA	NA
AUU44248.1|503485_504340_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
AUU44249.1|504336_505146_-	NAD(+) kinase	NA	NA	NA	NA	NA
AUU44250.1|505162_505798_-	GTP pyrophosphokinase	NA	NA	NA	NA	NA
AUU44251.1|505814_506162_-	hypothetical protein	NA	NA	NA	NA	NA
AUU44252.1|506347_506941_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
AUU44253.1|507044_507410_+	globin	NA	NA	NA	NA	NA
AUU44254.1|507432_508239_+	DsbA family protein	NA	NA	NA	NA	NA
AUU44255.1|508698_510507_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
AUU44256.1|510554_511541_-	competence protein CoiA	NA	NA	NA	NA	NA
AUU44257.1|511661_512381_-	adaptor protein MecA	NA	NA	NA	NA	NA
AUU44258.1|512796_513282_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
>prophage 4
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	689093	701360	2834014		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
AUU44427.1|689093_690065_-	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	80.2	7.8e-141
AUU44428.1|690434_691406_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
AUU44429.1|691525_693631_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.6	0.0e+00
AUU44430.1|693593_693992_-	protein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
AUU44431.1|694141_694408_-	ribonucleoside-diphosphate reductase	NA	NA	NA	NA	NA
AUU44432.1|694792_695659_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AUU44433.1|695678_696179_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
AUU44434.1|696516_698022_+	peptide ABC transporter permease	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
AUU44435.1|698099_698201_-	hypothetical protein	NA	NA	NA	NA	NA
AUU44436.1|698291_699209_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.4	6.2e-07
AUU44437.1|699601_700144_-	5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
AUU44438.1|700304_701360_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.4	1.8e-21
>prophage 5
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	713333	721154	2834014		Pandoravirus(16.67%)	10	NA	NA
AUU44448.1|713333_714485_-	aminodeoxychorismate synthase, component I	NA	S4VNU7	Pandoravirus	36.1	1.2e-23
AUU44449.1|714468_715062_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.4	3.7e-37
AUU44450.1|715412_716081_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
AUU44451.1|716082_716502_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
AUU44452.1|716505_717219_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	42.7	9.3e-51
AUU44453.1|717317_717902_+	hypothetical protein	NA	NA	NA	NA	NA
AUU44454.1|718181_718622_+	hypothetical protein	NA	NA	NA	NA	NA
AUU44455.1|718964_719438_+	DoxX family membrane protein	NA	NA	NA	NA	NA
AUU44456.1|719412_720099_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AUU44457.1|720098_721154_+	two-component sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
>prophage 6
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	1034566	1051535	2834014	capsid,integrase,terminase	Staphylococcus_phage(40.0%)	20	1031514:1031529	1049125:1049140
1031514:1031529	attL	ACAAATTCATTACCAA	NA	NA	NA	NA
AUU44743.1|1034566_1035289_+	exotoxin	NA	A0A1X9H080	Staphylococcus_phage	34.9	2.1e-26
AUU44744.1|1035455_1036256_-	exotoxin	NA	A0A097PAT7	Streptococcus_pyogenes_phage	43.4	4.0e-50
AUU44745.1|1037039_1037594_+	hypothetical protein	NA	A0A1W6JQE5	Staphylococcus_phage	66.7	1.2e-58
AUU44746.1|1037804_1038950_-	FRG domain-containing protein	NA	NA	NA	NA	NA
AUU46468.1|1038930_1039524_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
AUU46469.1|1039701_1039857_-|terminase	terminase	terminase	Q4ZE85	Staphylococcus_phage	96.0	2.2e-21
AUU44747.1|1039853_1040345_-	pathogenicity island protein	NA	A0A2H4JB26	uncultured_Caudovirales_phage	39.9	3.0e-24
AUU44748.1|1040527_1041586_-|capsid	phage capsid protein	capsid	A0A0K2CZ99	Paenibacillus_phage	26.6	3.6e-14
AUU44749.1|1041572_1041779_-	hypothetical protein	NA	NA	NA	NA	NA
AUU44750.1|1041759_1041966_-	hypothetical protein	NA	NA	NA	NA	NA
AUU44751.1|1042003_1042348_-	pathogenicity island protein	NA	A0A1W6JQD5	Staphylococcus_phage	65.2	5.5e-41
AUU44752.1|1043007_1045371_-	DNA primase	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	39.3	7.5e-137
AUU44753.1|1045462_1045762_-	DUF1474 domain-containing protein	NA	Q4ZE75	Staphylococcus_phage	66.7	5.9e-31
AUU44754.1|1045762_1045987_-	hypothetical protein	NA	A0A1W6JPA6	Staphylococcus_phage	61.8	1.5e-15
AUU44755.1|1046172_1046433_-	hypothetical protein	NA	NA	NA	NA	NA
AUU44756.1|1046433_1046670_-	XRE family transcriptional regulator	NA	Q38329	Lactococcus_phage	40.0	3.2e-08
AUU44757.1|1046802_1047189_+	XRE family transcriptional regulator	NA	U3PIS7	Lactobacillus_phage	41.2	3.8e-06
AUU44758.1|1047272_1048409_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	42.5	1.3e-75
AUU44759.1|1048502_1050044_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
1049125:1049140	attR	ACAAATTCATTACCAA	NA	NA	NA	NA
AUU44760.1|1050068_1051535_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
>prophage 7
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	2187638	2263693	2834014	capsid,tail,transposase,protease,holin,portal,head,integrase,terminase	Staphylococcus_phage(93.59%)	101	2201494:2201511	2227163:2227180
AUU45794.1|2187638_2188382_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AUU45795.1|2188558_2188843_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
AUU45796.1|2188918_2190535_+	molecular chaperone GroEL	NA	A0A240F779	uncultured_virus	54.7	5.8e-157
AUU45797.1|2191236_2191449_+	pathogenicity island family protein	NA	Q4ZE86	Staphylococcus_phage	74.3	1.1e-23
AUU45798.1|2191445_2192036_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	94.7	1.2e-96
AUU46514.1|2192353_2192791_+	hypothetical protein	NA	NA	NA	NA	NA
AUU45799.1|2192896_2193340_+	N-acetyltransferase	NA	NA	NA	NA	NA
AUU45800.1|2194182_2195490_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
AUU45801.1|2195650_2196562_+	ferrichrome ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AUU45802.1|2196623_2197415_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AUU45803.1|2197839_2199063_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AUU45804.1|2199497_2200550_+	bi-component leukocidin LukGH subunit H	NA	A0A2I6PDF3	Staphylococcus_phage	32.1	1.3e-35
AUU45805.1|2200571_2201588_+	bi-component leukocidin LukGH subunit G	NA	A0A2I6PER8	Staphylococcus_phage	29.3	3.9e-26
2201494:2201511	attL	AAAAAGAAGAAAAATTAT	NA	NA	NA	NA
AUU45806.1|2201825_2202650_-	sphingomyelin phosphodiesterase	NA	A0A1P8L6H7	Staphylococcus_phage	100.0	6.8e-162
AUU45807.1|2202706_2203744_-|integrase	site-specific integrase	integrase	A0A1X9H022	Staphylococcus_phage	100.0	2.6e-179
AUU46515.1|2203934_2204648_-	toxin MazF	NA	A0A1X9H026	Staphylococcus_phage	100.0	5.0e-129
AUU45808.1|2204725_2204908_-	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	98.3	3.4e-26
AUU45809.1|2204978_2205164_-	hypothetical protein	NA	U5U7D6	Staphylococcus_phage	100.0	2.3e-25
AUU45810.1|2205380_2206235_-	restriction endonuclease	NA	A0A1X9H037	Staphylococcus_phage	100.0	7.3e-151
AUU45811.1|2206246_2206963_-	helix-turn-helix domain-containing protein	NA	A0A1X9H038	Staphylococcus_phage	100.0	5.4e-131
AUU45812.1|2207126_2207369_+	transcriptional regulator	NA	A0A1X9H035	Staphylococcus_phage	100.0	1.6e-39
AUU45813.1|2207381_2207828_+	hypothetical protein	NA	A0A1W6JPI3	Staphylococcus_phage	100.0	1.9e-78
AUU45814.1|2207842_2207983_+	hypothetical protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
AUU45815.1|2207975_2208185_-	hypothetical protein	NA	A0A2I6PDR8	Staphylococcus_phage	100.0	9.1e-31
AUU45816.1|2208241_2208991_+	oxidoreductase	NA	A0A1W6JPN2	Staphylococcus_phage	100.0	2.0e-136
AUU45817.1|2209003_2209264_+	transcriptional regulator	NA	A0A2I6PDT7	Staphylococcus_phage	100.0	3.5e-40
AUU46516.1|2209496_2209817_+	DUF771 domain-containing protein	NA	A0A1W6JPI1	Staphylococcus_phage	100.0	7.4e-56
AUU45818.1|2209813_2209975_+	DUF1270 domain-containing protein	NA	Q4ZAZ7	Staphylococcus_virus	100.0	2.5e-20
AUU45819.1|2210067_2210328_+	hypothetical protein	NA	A0A2I6PDH1	Staphylococcus_phage	100.0	2.6e-43
AUU45820.1|2210336_2210600_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
AUU45821.1|2210608_2212552_+	ATPase	NA	I1W619	Staphylococcus_phage	100.0	0.0e+00
AUU45822.1|2212553_2213474_+	recombinase	NA	A0A1V0E5D7	Staphylococcus_phage	100.0	1.0e-166
AUU45823.1|2213602_2214172_+	MBL fold metallo-hydrolase	NA	A0A2I6PDI9	Staphylococcus_phage	99.4	2.5e-86
AUU45824.1|2214172_2214643_+	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	99.4	9.7e-81
AUU45825.1|2215541_2215760_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
AUU45826.1|2215768_2216173_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A0E3XBN4	Staphylococcus_phage	99.3	4.2e-72
AUU45827.1|2216185_2216554_+	hypothetical protein	NA	A0A0E3XD52	Staphylococcus_phage	100.0	6.7e-53
AUU45828.1|2216557_2216800_+	hypothetical protein	NA	R9QT89	Staphylococcus_phage	100.0	3.0e-41
AUU45829.1|2216813_2217200_+	hypothetical protein	NA	I1W655	Staphylococcus_phage	100.0	4.1e-69
AUU45830.1|2217196_2217391_+	hypothetical protein	NA	A0A2I6PE33	Staphylococcus_phage	100.0	2.5e-27
AUU45831.1|2217387_2217837_+	hypothetical protein	NA	A0A2I6PDH2	Staphylococcus_phage	100.0	9.3e-81
AUU45832.1|2217833_2218118_+	hypothetical protein	NA	E9LT36	Staphylococcus_phage	100.0	2.7e-46
AUU45833.1|2218110_2218365_+	DUF1024 domain-containing protein	NA	A0A2I6PDI5	Staphylococcus_phage	96.4	2.1e-37
AUU46517.1|2218327_2218522_+	hypothetical protein	NA	M1SVE4	Staphylococcus_phage	95.2	6.9e-25
AUU45834.1|2218514_2219048_+	dUTP pyrophosphatase	NA	A0A059T5A7	Staphylococcus_phage	97.2	2.1e-92
AUU45835.1|2219084_2219372_+	DUF1381 domain-containing protein	NA	Q4ZAB6	Staphylococcus_virus	98.9	2.4e-45
AUU45836.1|2219364_2219601_+	hypothetical protein	NA	A0A2I6PDD1	Staphylococcus_phage	98.7	4.8e-36
AUU45837.1|2219584_2219980_+	hypothetical protein	NA	A0A2I6PDC1	Staphylococcus_phage	97.7	6.9e-64
AUU45838.1|2219976_2220126_+	transcriptional regulator	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
AUU45839.1|2220125_2220326_+	hypothetical protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
AUU45840.1|2220353_2220770_+	transcriptional regulator	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
AUU45841.1|2221001_2221301_+	HNH endonuclease	NA	A0A1W6JPL7	Staphylococcus_phage	100.0	2.7e-52
AUU45842.1|2221430_2221775_+	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
AUU45843.1|2221771_2223433_+|terminase	terminase large subunit	terminase	Q8LTH3	Staphylococcus_phage	99.8	0.0e+00
AUU45844.1|2223448_2224612_+|portal	phage portal protein	portal	A0A1W6JPQ9	Staphylococcus_phage	100.0	1.8e-216
AUU45845.1|2224595_2225333_+|protease	Clp protease ClpP	protease	A0A1W6JPK0	Staphylococcus_phage	100.0	1.8e-129
AUU45846.1|2225355_2226501_+|capsid	phage major capsid protein	capsid	A0A1W6JPL4	Staphylococcus_phage	100.0	1.9e-215
AUU45847.1|2226520_2226805_+	hypothetical protein	NA	A0A1W6JPL8	Staphylococcus_phage	100.0	2.3e-45
AUU45848.1|2226794_2227079_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
AUU45849.1|2227062_2227425_+|head,tail	phage head-tail adapter protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
2227163:2227180	attR	AAAAAGAAGAAAAATTAT	NA	NA	NA	NA
AUU45850.1|2227421_2227826_+	hypothetical protein	NA	A0A1W6JPJ1	Staphylococcus_phage	100.0	2.5e-69
AUU45851.1|2227822_2228230_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
AUU45852.1|2228230_2228872_+|tail	phage tail protein	tail	A0A1W6JPP5	Staphylococcus_phage	100.0	1.1e-119
AUU46518.1|2228832_2229138_+	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	93.2	1.5e-29
AUU45853.1|2229189_2229540_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
AUU45854.1|2229784_2234314_+|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	96.8	0.0e+00
AUU45855.1|2234310_2235795_+|tail	phage tail protein	tail	A0A068A242	Staphylococcus_phage	99.8	2.0e-297
AUU45856.1|2235810_2239596_+	hypothetical protein	NA	A0A1X9H0H3	Staphylococcus_phage	98.4	0.0e+00
AUU45857.1|2239585_2239738_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
AUU45858.1|2239784_2240072_+	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
AUU45859.1|2240129_2240426_+	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
AUU45860.1|2240575_2240752_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
AUU45861.1|2240804_2240912_-	hypothetical protein	NA	NA	NA	NA	NA
AUU45862.1|2240963_2241218_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
AUU45863.1|2241229_2241985_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	99.6	2.2e-151
AUU45864.1|2242175_2242667_+	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	99.4	1.2e-86
AUU45865.1|2243193_2243652_+	amidase	NA	R9QTN8	Staphylococcus_phage	98.7	4.9e-85
AUU45866.1|2243746_2244196_-	chemotaxis inhibitory protein	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
AUU45867.1|2244880_2245231_+	inhibitor	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
AUU45868.1|2245283_2245544_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
AUU45869.1|2245522_2245831_-	hypothetical protein	NA	M9NTD8	Staphylococcus_phage	100.0	2.1e-39
AUU45870.1|2245854_2246034_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
AUU45871.1|2246405_2246606_-	hypothetical protein	NA	A0A1P8L6A7	Staphylococcus_phage	98.5	1.0e-26
AUU45872.1|2246991_2249040_+	MAP domain-containing protein	NA	NA	NA	NA	NA
AUU45873.1|2249318_2250605_-	aspartate aminotransferase	NA	NA	NA	NA	NA
AUU45874.1|2250804_2250903_+	hypothetical protein	NA	NA	NA	NA	NA
AUU45875.1|2251145_2251304_+	hypothetical protein	NA	NA	NA	NA	NA
AUU45876.1|2251580_2251961_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AUU45877.1|2251957_2252854_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	6.5e-17
AUU45878.1|2252854_2253535_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
AUU45879.1|2253531_2254404_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
AUU45880.1|2254403_2255144_+	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
AUU45881.1|2255209_2255773_-	thioredoxin family protein	NA	NA	NA	NA	NA
AUU45882.1|2255893_2256418_+	hypothetical protein	NA	NA	NA	NA	NA
AUU45883.1|2256477_2257035_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
AUU45884.1|2257031_2257874_+	hypothetical protein	NA	NA	NA	NA	NA
AUU45885.1|2257930_2258971_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
AUU45886.1|2259421_2259595_+	hypothetical protein	NA	NA	NA	NA	NA
AUU45887.1|2260101_2261253_+|transposase	transposase	transposase	P97010	Streptococcus_pyogenes_phage	31.0	9.0e-11
AUU46519.1|2261291_2263319_+|transposase	transposase	transposase	NA	NA	NA	NA
AUU45888.1|2263327_2263693_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 8
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	2379532	2387195	2834014	transposase	Staphylococcus_phage(66.67%)	8	NA	NA
AUU45992.1|2379532_2380297_+	exotoxin	NA	A0A1X9H080	Staphylococcus_phage	37.1	2.3e-31
AUU45993.1|2380577_2381297_+	exotoxin	NA	A0A1X9H080	Staphylococcus_phage	35.8	2.3e-25
AUU45994.1|2381331_2382060_+	exotoxin	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
AUU45995.1|2382213_2382984_+	exotoxin	NA	A0A097PAT7	Streptococcus_pyogenes_phage	43.6	6.3e-45
AUU45996.1|2383022_2383778_+	exotoxin	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
AUU45997.1|2384060_2384837_+	enterotoxin	NA	NA	NA	NA	NA
AUU45998.1|2385054_2385240_-	hypothetical protein	NA	NA	NA	NA	NA
AUU45999.1|2386065_2387195_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.7	5.2e-80
>prophage 9
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	2394167	2413415	2834014	transposase	Staphylococcus_phage(100.0%)	22	NA	NA
AUU46007.1|2394167_2394272_+	hypothetical protein	NA	A0A2H4PQU1	Staphylococcus_phage	87.5	7.2e-05
AUU46008.1|2394445_2394670_+|transposase	transposase	transposase	A0A2H4PQV6	Staphylococcus_phage	86.8	6.8e-24
AUU46009.1|2394851_2395235_+	hypothetical protein	NA	NA	NA	NA	NA
AUU46010.1|2395245_2395422_+	hypothetical protein	NA	NA	NA	NA	NA
AUU46011.1|2395423_2395609_+	hypothetical protein	NA	NA	NA	NA	NA
AUU46012.1|2395794_2396364_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	95.0	1.2e-77
AUU46013.1|2396560_2397133_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	7.8e-24
AUU46014.1|2397233_2397575_-	DUF3969 domain-containing protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.9	2.5e-54
AUU46015.1|2397615_2398242_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	91.8	6.4e-88
AUU46016.1|2398317_2399313_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	95.2	1.9e-70
AUU46524.1|2400344_2400800_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
AUU46017.1|2400958_2402437_+	2-succinylbenzoate-CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	1.6e-283
AUU46018.1|2402441_2403443_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.9	2.8e-186
AUU46019.1|2403439_2403697_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	90.6	2.0e-40
AUU46020.1|2403762_2404236_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	3.6e-83
AUU46525.1|2404240_2404987_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	97.6	7.8e-141
AUU46021.1|2405364_2406957_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
AUU46022.1|2407327_2408521_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	2.2e-217
AUU46023.1|2408645_2409554_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	2.9e-137
AUU46024.1|2409770_2410604_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	6.0e-158
AUU46025.1|2412699_2413053_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	82.9	1.9e-20
AUU46026.1|2413049_2413415_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	99.2	4.8e-59
>prophage 10
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	2423334	2432338	2834014		Staphylococcus_phage(100.0%)	9	NA	NA
AUU46038.1|2423334_2423730_-	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	96.9	4.5e-71
AUU46039.1|2423747_2425040_-	arsenical efflux pump membrane protein ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	94.2	7.5e-216
AUU46040.1|2425039_2425354_-	ArsR family transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	1.3e-52
AUU46041.1|2425880_2427383_+	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
AUU46042.1|2427875_2428907_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	4.0e-196
AUU46043.1|2428913_2429546_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
AUU46044.1|2429556_2430738_+	riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	100.0	1.7e-227
AUU46045.1|2430750_2431215_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
AUU46046.1|2431336_2432338_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
>prophage 11
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	2435499	2448238	2834014	tRNA	Staphylococcus_phage(100.0%)	6	NA	NA
AUU46050.1|2435499_2436063_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	100.0	2.2e-103
AUU46051.1|2436059_2437013_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
AUU46052.1|2437123_2438305_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
AUU46053.1|2438592_2441010_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.3	0.0e+00
AUU46054.1|2441031_2441343_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
AUU46055.1|2441668_2448238_+	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	92.6	1.9e-294
>prophage 12
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	2571195	2580238	2834014	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
AUU46167.1|2571195_2572200_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
AUU46168.1|2572201_2573227_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AUU46169.1|2573249_2574389_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
AUU46170.1|2574407_2574668_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
AUU46171.1|2574942_2577222_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
AUU46172.1|2577424_2579698_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.0	3.1e-63
AUU46173.1|2579719_2580238_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
>prophage 13
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	2649684	2658014	2834014	tRNA	Caulobacter_phage(16.67%)	7	NA	NA
AUU46239.1|2649684_2651502_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	7.9e-54
AUU46240.1|2651725_2652832_+	RNA polymerase sigma factor SigA	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
AUU46241.1|2652962_2653640_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
AUU46242.1|2653642_2654743_+	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
AUU46243.1|2654856_2656203_+	DEAD/DEAH box family ATP-dependent RNA helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	9.1e-55
AUU46244.1|2656212_2657103_+	endonuclease	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
AUU46245.1|2657228_2658014_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
>prophage 14
CP026064	Staphylococcus aureus strain NRS271 chromosome, complete genome	2834014	2713133	2796595	2834014	capsid,tail,protease,holin,portal,head,tRNA,integrase,terminase	Staphylococcus_phage(80.52%)	107	2717054:2717071	2791672:2791689
AUU46310.1|2713133_2713859_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
AUU46311.1|2713839_2715591_+	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	33.6	1.3e-21
AUU46312.1|2715842_2716760_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
AUU46313.1|2716762_2718799_+	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	53.7	4.0e-54
2717054:2717071	attL	AATATAAAGTTAATGAAT	NA	NA	NA	NA
AUU46314.1|2718841_2720047_-|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
AUU46315.1|2720172_2720787_+	ATPase	NA	M9QRQ8	Staphylococcus_phage	99.5	2.5e-105
AUU46316.1|2720783_2720930_-	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	100.0	1.2e-16
AUU46317.1|2720966_2721149_-	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
AUU46318.1|2721219_2721951_-	peptidase S24	NA	S4SVC5	Staphylococcus_phage	99.2	1.3e-132
AUU46319.1|2722102_2722315_+	XRE family transcriptional regulator	NA	A7TWF1	Staphylococcus_phage	100.0	1.6e-30
AUU46320.1|2722362_2722806_+	hypothetical protein	NA	A7TWF2	Staphylococcus_phage	100.0	8.9e-76
AUU46321.1|2723010_2723223_-	uracil-DNA glycosylase	NA	D2JGJ1	Staphylococcus_phage	100.0	7.6e-33
AUU46322.1|2723292_2723490_+	hypothetical protein	NA	A7TWF5	Staphylococcus_phage	100.0	4.6e-24
AUU46323.1|2723476_2723857_-	DUF2513 domain-containing protein	NA	Q4ZCQ5	Staphylococcus_virus	100.0	5.8e-68
AUU46324.1|2723923_2724169_+	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
AUU46325.1|2724137_2724503_-	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
AUU46326.1|2724557_2724773_+	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
AUU46327.1|2724797_2725061_+	helix-turn-helix domain-containing protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
AUU46328.1|2725073_2725235_+	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
AUU46329.1|2725313_2725637_+	TrmB family transcriptional regulator	NA	A0A2I6PDL5	Staphylococcus_phage	100.0	1.3e-52
AUU46330.1|2725651_2726014_+	hypothetical protein	NA	Q4ZCP8	Staphylococcus_virus	100.0	2.2e-56
AUU46331.1|2726010_2727177_+	DUF2800 domain-containing protein	NA	R4WAL0	Staphylococcus_phage	99.7	7.0e-221
AUU46332.1|2727202_2727757_+	DUF2815 domain-containing protein	NA	M9QRS1	Staphylococcus_phage	100.0	1.4e-99
AUU46536.1|2727825_2729778_+	DNA polymerase	NA	Q4ZCP5	Staphylococcus_virus	99.4	0.0e+00
AUU46333.1|2729790_2729976_+	DUF3113 domain-containing protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
AUU46334.1|2729975_2730377_+	PVL family protein	NA	A0A2I6PF14	Staphylococcus_phage	98.5	3.6e-68
AUU46335.1|2730376_2730634_+	DUF3310 domain-containing protein	NA	A0A2I6PEN5	Staphylococcus_phage	100.0	2.6e-43
AUU46336.1|2730636_2730837_+	hypothetical protein	NA	A0A2I6PEM3	Staphylococcus_phage	100.0	2.5e-30
AUU46337.1|2730851_2731094_+	hypothetical protein	NA	A0A2D1G5G2	Staphylococcus_phage	97.5	2.8e-39
AUU46338.1|2731108_2731357_+	DUF1024 domain-containing protein	NA	Q9B0F3	Staphylococcus_virus	97.6	2.7e-37
AUU46339.1|2731349_2731877_+	dUTP pyrophosphatase	NA	A7TWB1	Staphylococcus_phage	100.0	7.8e-95
AUU46340.1|2731913_2732150_+	DUF1381 domain-containing protein	NA	C8CH06	Staphylococcus_phage	98.7	3.1e-35
AUU46341.1|2732174_2732411_+	hypothetical protein	NA	A7TWB3	Staphylococcus_phage	100.0	1.9e-37
AUU46342.1|2732394_2732787_+	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	98.5	3.1e-64
AUU46537.1|2732786_2732939_+	transcriptional regulator	NA	A7TWI2	Staphylococcus_phage	94.0	1.4e-17
AUU46343.1|2733006_2733207_+	hypothetical protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
AUU46344.1|2733258_2735706_+	hypothetical protein	NA	R4WAL1	Staphylococcus_phage	100.0	0.0e+00
AUU46345.1|2735814_2735913_-	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	3.7e-11
AUU46538.1|2736046_2736337_+	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
AUU46346.1|2736317_2737685_+	ATP-dependent helicase	NA	A0A2I6PE95	Staphylococcus_phage	99.8	1.9e-262
AUU46347.1|2737697_2738135_+	transcriptional regulator	NA	A0A2I6PDC2	Staphylococcus_phage	100.0	4.6e-77
AUU46348.1|2738291_2738606_+	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
AUU46349.1|2738734_2739040_+|terminase	phage terminase small subunit P27 family	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
AUU46350.1|2739029_2740721_+|terminase	terminase large subunit	terminase	A0A1X9IGU0	Staphylococcus_phage	99.8	0.0e+00
AUU46351.1|2740725_2741964_+|portal	phage portal protein	portal	A0A2I6PER5	Staphylococcus_phage	100.0	6.9e-235
AUU46352.1|2741947_2742721_+|protease	Clp protease ClpP	protease	A0A2I6PEQ7	Staphylococcus_phage	100.0	2.4e-137
AUU46353.1|2742732_2743896_+|capsid	phage major capsid protein	capsid	A0A2I6PEQ3	Staphylococcus_phage	99.7	2.1e-217
AUU46354.1|2743964_2744243_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
AUU46355.1|2744254_2744587_+	hypothetical protein	NA	A0A2I6PES3	Staphylococcus_phage	100.0	4.1e-57
AUU46356.1|2744583_2744985_+	hypothetical protein	NA	A0A2I6PF54	Staphylococcus_phage	100.0	8.1e-68
AUU46357.1|2744985_2745381_+	DUF3168 domain-containing protein	NA	A0A2I6PEQ4	Staphylococcus_phage	100.0	8.8e-67
AUU46358.1|2745415_2746057_+|tail	phage tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
AUU46359.1|2746148_2746604_+|tail	phage tail protein	tail	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
AUU46360.1|2746661_2747012_+	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
AUU46361.1|2747053_2747212_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
AUU46362.1|2747225_2753426_+|tail	phage tail tape measure protein	tail	A0A1X9IGU9	Staphylococcus_phage	100.0	0.0e+00
AUU46363.1|2753425_2754250_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	99.6	7.8e-158
AUU46364.1|2754258_2755842_+	peptidase	NA	A0A2I6PEQ5	Staphylococcus_phage	99.8	3.5e-308
AUU46365.1|2755841_2756132_+	hypothetical protein	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
AUU46366.1|2756147_2758058_+	hypothetical protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
AUU46367.1|2758057_2759524_+	DUF2479 domain-containing protein	NA	A0A2I6PES7	Staphylococcus_phage	100.0	1.5e-273
AUU46368.1|2759523_2759913_+	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	99.2	4.9e-62
AUU46369.1|2759905_2760070_+	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
AUU46370.1|2760115_2760415_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
AUU46371.1|2760567_2760744_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
AUU46372.1|2760796_2760904_-	hypothetical protein	NA	NA	NA	NA	NA
AUU46373.1|2760955_2761210_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
AUU46374.1|2761221_2761977_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
AUU46375.1|2762337_2764242_+	adenine methyltransferase	NA	A0A1W6JNK1	Staphylococcus_phage	84.5	0.0e+00
AUU46376.1|2764228_2765239_+	restriction endonuclease subunit S	NA	A0A1W6JNN3	Staphylococcus_phage	41.3	2.7e-64
AUU46377.1|2765285_2765633_+	hypothetical protein	NA	Q4ZCJ7	Staphylococcus_virus	98.2	1.5e-25
AUU46378.1|2765723_2766659_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
AUU46379.1|2766642_2766789_+	hypothetical protein	NA	NA	NA	NA	NA
AUU46380.1|2766863_2767772_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
AUU46381.1|2768226_2769171_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
AUU46382.1|2769572_2770118_+	ECF transporter S component	NA	NA	NA	NA	NA
AUU46383.1|2770223_2770472_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
AUU46384.1|2770579_2771533_+	hypothetical protein	NA	NA	NA	NA	NA
AUU46385.1|2771522_2772902_+	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.3	6.4e-56
AUU46386.1|2773054_2774506_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
AUU46387.1|2774631_2774748_+	hypothetical protein	NA	NA	NA	NA	NA
AUU46388.1|2774908_2775877_+	FAD-binding protein	NA	NA	NA	NA	NA
AUU46389.1|2776009_2776978_-	asparaginase	NA	NA	NA	NA	NA
AUU46390.1|2777054_2777714_+	cytidylate kinase	NA	NA	NA	NA	NA
AUU46391.1|2777744_2777861_+	hypothetical protein	NA	NA	NA	NA	NA
AUU46392.1|2777886_2778024_-	hypothetical protein	NA	NA	NA	NA	NA
AUU46393.1|2777977_2778169_+	hypothetical protein	NA	NA	NA	NA	NA
AUU46394.1|2778425_2779601_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
AUU46395.1|2779822_2781133_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
AUU46396.1|2781149_2782148_+	glycerol-3-phosphate dehydrogenase (NAD(P)(+))	NA	NA	NA	NA	NA
AUU46397.1|2782318_2782591_+	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
AUU46398.1|2782780_2783095_-	hypothetical protein	NA	NA	NA	NA	NA
AUU46399.1|2783021_2783594_+	heptaprenyl pyrophosphate synthase subunit A	NA	NA	NA	NA	NA
AUU46400.1|2783596_2784322_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
AUU46539.1|2784338_2785283_+	heptaprenyl diphosphate synthase	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
AUU46401.1|2785374_2785824_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
AUU46402.1|2786033_2786234_+	hypothetical protein	NA	NA	NA	NA	NA
AUU46403.1|2786620_2787787_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	2.0e-34
AUU46404.1|2787812_2788877_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
AUU46405.1|2788886_2790185_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AUU46406.1|2790191_2791436_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AUU46407.1|2791449_2792025_+	IDEAL domain-containing protein	NA	G3MAV7	Bacillus_virus	26.7	7.9e-08
2791672:2791689	attR	AATATAAAGTTAATGAAT	NA	NA	NA	NA
AUU46408.1|2792014_2792602_+	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
AUU46540.1|2792673_2793354_+	zinc metallopeptidase	NA	NA	NA	NA	NA
AUU46409.1|2793690_2794008_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
AUU46410.1|2794245_2795388_+	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
AUU46411.1|2795392_2796595_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.3	1.9e-35
>prophage 1
CP026065	Staphylococcus aureus strain NRS271 plasmid unnamed	45039	34038	40940	45039	transposase	Staphylococcus_phage(66.67%)	8	NA	NA
AUU46570.1|34038_34434_-	protein ArsC	NA	A0A2H4PQT9	Staphylococcus_phage	86.3	8.5e-62
AUU46571.1|34451_35741_-	arsenical efflux pump membrane protein ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	81.4	6.6e-188
AUU46572.1|35740_36055_-	transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	73.1	4.7e-39
AUU46573.1|36770_36983_+	hypothetical protein	NA	NA	NA	NA	NA
AUU46574.1|37017_37692_-|transposase	IS6-like element ISSau6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	87.9	4.8e-113
AUU46575.1|37786_38164_+|transposase	transposase	transposase	NA	NA	NA	NA
AUU46576.1|38401_38767_+	ArsR family transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	47.8	8.5e-24
AUU46577.1|38759_40940_+	cadmium-transporting ATPase	NA	E4ZFI9	Streptococcus_phage	63.7	9.3e-251
