The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026962	Staphylococcus aureus strain FDAARGOS_6 chromosome, complete genome	2697644	850960	858780	2697644		Hokovirus(16.67%)	10	NA	NA
AVG63422.1|850960_852016_-	two-component sensor histidine kinase	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
AVG63423.1|852015_852702_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AVG63424.1|852676_853150_-	DoxX family protein	NA	NA	NA	NA	NA
AVG63425.1|853491_853932_-	hypothetical protein	NA	NA	NA	NA	NA
AVG63426.1|854211_854796_-	hypothetical protein	NA	NA	NA	NA	NA
AVG63427.1|854894_855608_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
AVG63428.1|855611_856031_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
AVG63429.1|856032_856701_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
AVG63430.1|857051_857645_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
AVG63431.1|857628_858780_+	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
>prophage 2
CP026962	Staphylococcus aureus strain FDAARGOS_6 chromosome, complete genome	2697644	870752	885483	2697644		uncultured_Caudovirales_phage(50.0%)	18	NA	NA
AVG63441.1|870752_871811_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
AVG63442.1|872161_872704_+	5'(3')-deoxyribonucleotidase	NA	NA	NA	NA	NA
AVG63443.1|872816_872915_+	hypothetical protein	NA	NA	NA	NA	NA
AVG63444.1|873327_874245_-	lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
AVG63445.1|874335_874437_+	hypothetical protein	NA	NA	NA	NA	NA
AVG63446.1|874514_876020_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
AVG63447.1|876085_876331_-	hypothetical protein	NA	NA	NA	NA	NA
AVG63448.1|876360_876861_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
AVG63449.1|876880_877747_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AVG63450.1|878131_878398_+	ribonucleoside-diphosphate reductase	NA	NA	NA	NA	NA
AVG63451.1|878547_878946_+	protein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
AVG63452.1|878908_881014_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
AVG63453.1|881131_882103_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
AVG63454.1|882235_882340_+	hypothetical protein	NA	NA	NA	NA	NA
AVG63455.1|882616_882772_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65225.1|882810_883782_+	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
AVG63456.1|883768_884725_+	iron ABC transporter permease	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
AVG63457.1|884721_885483_+	iron ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 3
CP026962	Staphylococcus aureus strain FDAARGOS_6 chromosome, complete genome	2697644	1056115	1110993	2697644	holin,tRNA,protease,bacteriocin	Streptococcus_phage(28.57%)	56	NA	NA
AVG63628.1|1056115_1057105_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
AVG63629.1|1057399_1057795_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
AVG63630.1|1058165_1058885_+	adaptor protein MecA	NA	NA	NA	NA	NA
AVG63631.1|1059005_1059992_+	competence protein CoiA	NA	NA	NA	NA	NA
AVG63632.1|1060039_1061848_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.4	9.3e-47
AVG63633.1|1062307_1063114_-	DsbA family protein	NA	NA	NA	NA	NA
AVG63634.1|1063136_1063502_-	globin	NA	NA	NA	NA	NA
AVG63635.1|1063605_1064199_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
AVG63636.1|1064384_1064732_+	hypothetical protein	NA	NA	NA	NA	NA
AVG63637.1|1064748_1065384_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
AVG63638.1|1065400_1066210_+	NAD(+) kinase	NA	NA	NA	NA	NA
AVG63639.1|1066206_1067061_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
AVG63640.1|1067081_1068467_+	magnesium transporter	NA	NA	NA	NA	NA
AVG63641.1|1068476_1070321_+	sodium:proton antiporter	NA	NA	NA	NA	NA
AVG63642.1|1070598_1071369_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AVG63643.1|1071563_1072649_-	AI-2E family transporter	NA	NA	NA	NA	NA
AVG63644.1|1072990_1074559_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
AVG63645.1|1074700_1075459_+	esterase family protein	NA	NA	NA	NA	NA
AVG63646.1|1075652_1076162_+	hypothetical protein	NA	NA	NA	NA	NA
AVG63647.1|1076274_1077483_-	MFS transporter	NA	NA	NA	NA	NA
AVG63648.1|1077442_1078618_-	diacylglycerol beta-glucosyltransferase	NA	NA	NA	NA	NA
AVG63649.1|1079050_1080532_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
AVG63650.1|1080515_1080776_+	hypothetical protein	NA	NA	NA	NA	NA
AVG63651.1|1080775_1082338_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	4.9e-36
AVG63652.1|1082639_1083443_+	hypothetical protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
AVG63653.1|1083661_1085986_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.1	8.1e-11
AVG63654.1|1086002_1087361_+	Ktr system potassium uptake protein D	NA	NA	NA	NA	NA
AVG63655.1|1087499_1089011_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
AVG63656.1|1089497_1090067_-	competence protein ComK	NA	NA	NA	NA	NA
AVG63657.1|1090276_1090495_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
AVG63658.1|1090575_1091562_-	lipoate--protein ligase	NA	NA	NA	NA	NA
AVG63659.1|1091760_1091937_+	DUF2187 domain-containing protein	NA	NA	NA	NA	NA
AVG63660.1|1091951_1092554_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AVG65229.1|1092854_1092932_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
AVG63661.1|1093470_1093572_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65230.1|1093581_1093854_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
AVG63662.1|1093897_1095862_+	DUF1430 domain-containing protein	NA	NA	NA	NA	NA
AVG63663.1|1095864_1096185_+	hypothetical protein	NA	NA	NA	NA	NA
AVG63664.1|1096181_1096823_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	2.2e-19
AVG63665.1|1096910_1097201_-	hypothetical protein	NA	NA	NA	NA	NA
AVG63666.1|1097479_1097767_+	hypothetical protein	NA	NA	NA	NA	NA
AVG63667.1|1097772_1099254_+	glycosyl transferase family 1	NA	NA	NA	NA	NA
AVG63668.1|1099342_1099699_-	DoxX family protein	NA	NA	NA	NA	NA
AVG63669.1|1100186_1101146_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AVG63670.1|1101191_1101323_-	hypothetical protein	NA	NA	NA	NA	NA
AVG63671.1|1101386_1101677_-	NINE protein	NA	A0A060AN66	Enterococcus_phage	38.0	7.5e-07
AVG63672.1|1101766_1102318_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AVG63673.1|1102368_1103307_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
AVG63674.1|1103457_1103562_+	hypothetical protein	NA	NA	NA	NA	NA
AVG63675.1|1103638_1104850_+	isochorismate synthase	NA	NA	NA	NA	NA
AVG63676.1|1104836_1106510_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase	NA	NA	NA	NA	NA
AVG63677.1|1106496_1107300_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
AVG63678.1|1107292_1108114_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
AVG63679.1|1108352_1108682_-	staphostatin B	NA	NA	NA	NA	NA
AVG63680.1|1108719_1109901_-|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
AVG63681.1|1109982_1110993_-|protease	serine protease	protease	A0A2H4PQP7	Staphylococcus_phage	32.3	6.2e-16
>prophage 4
CP026962	Staphylococcus aureus strain FDAARGOS_6 chromosome, complete genome	2697644	1129888	1138361	2697644		Synechococcus_phage(33.33%)	9	NA	NA
AVG63698.1|1129888_1130371_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
AVG63699.1|1130357_1131482_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
AVG63700.1|1131485_1132190_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
AVG63701.1|1132189_1132453_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
AVG63702.1|1132454_1133126_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
AVG63703.1|1133118_1135308_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.0e-140
AVG63704.1|1135286_1136771_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
AVG63705.1|1136763_1137792_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
AVG63706.1|1137794_1138361_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 5
CP026962	Staphylococcus aureus strain FDAARGOS_6 chromosome, complete genome	2697644	1673845	1682157	2697644	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
AVG64214.1|1673845_1674631_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
AVG64215.1|1674756_1675647_-	endonuclease	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
AVG64216.1|1675656_1677003_-	DEAD/DEAH box family ATP-dependent RNA helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
AVG64217.1|1677116_1678217_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
AVG64218.1|1678219_1678897_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
AVG64219.1|1679027_1680134_-	RNA polymerase sigma factor SigA	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
AVG64220.1|1680357_1682157_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
>prophage 6
CP026962	Staphylococcus aureus strain FDAARGOS_6 chromosome, complete genome	2697644	1751295	1760338	2697644	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
AVG64290.1|1751295_1751814_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
AVG64291.1|1751835_1754109_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
AVG64292.1|1754311_1756591_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
AVG64293.1|1756865_1757126_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
AVG64294.1|1757144_1758284_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
AVG64295.1|1758306_1759332_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AVG64296.1|1759333_1760338_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 7
CP026962	Staphylococcus aureus strain FDAARGOS_6 chromosome, complete genome	2697644	1886111	1967599	2697644	transposase,tRNA,protease,bacteriocin	Staphylococcus_phage(93.55%)	80	NA	NA
AVG64410.1|1886111_1892672_-	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	98.1	3.4e-304
AVG64411.1|1893014_1893326_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
AVG64412.1|1893347_1895765_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
AVG64413.1|1896052_1897234_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
AVG64414.1|1897343_1898297_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
AVG64415.1|1898293_1898857_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
AVG64416.1|1898976_1899378_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AVG64417.1|1900956_1901784_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AVG64418.1|1901786_1901906_-	hypothetical protein	NA	NA	NA	NA	NA
AVG64419.1|1901917_1902109_-	hypothetical protein	NA	NA	NA	NA	NA
AVG64420.1|1902017_1903019_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
AVG64421.1|1903140_1903605_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
AVG64422.1|1903617_1904799_-	riboflavin biosynthesis protein RibBA	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
AVG64423.1|1904809_1905442_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
AVG65251.1|1905448_1906480_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	4.8e-197
AVG64424.1|1906972_1908475_-	pyridine nucleotide-disulfide oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
AVG64425.1|1908997_1909312_+	ArsR family transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
AVG64426.1|1909311_1910604_+	arsenical efflux pump membrane protein ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.3	1.9e-227
AVG64427.1|1910621_1911017_+	protein ArsC	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
AVG64428.1|1911311_1912166_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
AVG64429.1|1912441_1912666_-	hypothetical protein	NA	NA	NA	NA	NA
AVG64430.1|1912864_1913335_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	3.3e-81
AVG64431.1|1913447_1913891_+	competence protein ComK	NA	NA	NA	NA	NA
AVG64432.1|1913877_1914321_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
AVG64433.1|1914616_1915252_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AVG64434.1|1915691_1916405_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
AVG64435.1|1916664_1916967_+	hypothetical protein	NA	NA	NA	NA	NA
AVG64436.1|1917222_1917588_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
AVG64437.1|1917584_1917938_+	camphor resistance protein CrcB	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
AVG64438.1|1920021_1920855_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
AVG64439.1|1921066_1921975_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
AVG64440.1|1922099_1923293_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
AVG64441.1|1923663_1925256_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
AVG64442.1|1925391_1925877_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
AVG65252.1|1926251_1926998_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.1e-142
AVG64443.1|1927002_1927476_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
AVG64444.1|1927541_1927799_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
AVG64445.1|1927795_1928797_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
AVG64446.1|1928801_1930280_-	2-succinylbenzoate-CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
AVG65253.1|1930438_1930894_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	3.0e-79
AVG64447.1|1931196_1931847_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	88.4	2.7e-44
AVG64448.1|1931927_1932923_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.1e-73
AVG64449.1|1932998_1933625_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	7.1e-79
AVG64450.1|1933665_1934010_+	DUF3969 domain-containing protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
AVG64451.1|1934107_1934659_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
AVG64452.1|1934876_1935518_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
AVG64453.1|1935631_1935817_-	hypothetical protein	NA	NA	NA	NA	NA
AVG64454.1|1935818_1935995_-	hypothetical protein	NA	NA	NA	NA	NA
AVG64455.1|1936005_1936389_-	hypothetical protein	NA	NA	NA	NA	NA
AVG64456.1|1936580_1936790_-|transposase	transposase	transposase	A0A2H4PQV6	Staphylococcus_phage	100.0	1.4e-31
AVG64457.1|1936992_1937136_-	hypothetical protein	NA	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
AVG64458.1|1937556_1937658_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65254.1|1938005_1938365_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
AVG64459.1|1938902_1943015_-	ATP-binding protein	NA	A0A2H4PQT3	Staphylococcus_phage	100.0	0.0e+00
AVG64460.1|1943864_1945064_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	100.0	8.5e-230
AVG64461.1|1945056_1946796_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	2.4e-289
AVG64462.1|1946776_1946911_-	hypothetical protein	NA	NA	NA	NA	NA
AVG64463.1|1946975_1947695_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
AVG64464.1|1947845_1948562_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
AVG64465.1|1948663_1948771_+	hypothetical protein	NA	NA	NA	NA	NA
AVG64466.1|1948719_1949439_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
AVG64467.1|1949559_1950279_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
AVG64468.1|1950336_1951059_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
AVG64469.1|1951183_1951891_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	100.0	2.6e-130
AVG64470.1|1952326_1952545_-	hypothetical protein	NA	NA	NA	NA	NA
AVG64471.1|1952854_1953421_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
AVG64472.1|1953894_1954593_-	BsaG protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
AVG64473.1|1954589_1955351_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
AVG64474.1|1955347_1956040_-	lantibiotic ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
AVG64475.1|1956062_1957436_-	peptidase S8	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
AVG64476.1|1957445_1957964_-	enterotoxin	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
AVG64477.1|1957979_1959224_-	lanthionine synthetase	NA	A0A2H4PQH9	Staphylococcus_phage	100.0	5.1e-238
AVG64478.1|1959216_1962210_-|bacteriocin	bacteriocin biosynthesis protein	bacteriocin	A0A2H4PQG8	Staphylococcus_phage	97.3	0.0e+00
AVG64479.1|1962274_1962418_-	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
AVG64480.1|1962861_1963053_+	hypothetical protein	NA	NA	NA	NA	NA
AVG64481.1|1963154_1963298_-	gallidermin/nisin family lantibiotic	NA	NA	NA	NA	NA
AVG64482.1|1963539_1964523_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
AVG65255.1|1964524_1965430_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	99.7	3.6e-172
AVG64483.1|1966258_1966798_+	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	2.0e-61
AVG64484.1|1966810_1967599_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
>prophage 1
CP026963	Staphylococcus aureus strain FDAARGOS_6 plasmid unnamed1	61643	2599	57273	61643	transposase	Staphylococcus_phage(71.43%)	59	NA	NA
AVG65284.1|2599_3274_+|transposase	IS6 family transposase IS257-3	transposase	A0A0N9RU54	Staphylococcus_phage	97.3	2.2e-126
AVG65285.1|3403_4018_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65286.1|4086_5358_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65287.1|5399_5816_-	YolD-like family protein	NA	A0A2H4JEH6	uncultured_Caudovirales_phage	60.9	1.0e-33
AVG65288.1|6110_6668_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	44.9	4.9e-31
AVG65289.1|6949_7729_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65290.1|7862_9479_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65291.1|9489_9678_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65292.1|9681_11406_+	LtrC	NA	NA	NA	NA	NA
AVG65293.1|11446_13444_-	oriT nickase	NA	NA	NA	NA	NA
AVG65294.1|13647_13920_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65295.1|14023_14257_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65296.1|14519_15560_+	parM protein	NA	NA	NA	NA	NA
AVG65297.1|15562_15892_+	plasmid segregation protein ParR	NA	NA	NA	NA	NA
AVG65298.1|15895_16156_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AVG65299.1|16536_17496_+	replication protein	NA	NA	NA	NA	NA
AVG65300.1|17614_18289_+|transposase	IS6 family transposase IS257R1	transposase	A0A0N9SKD3	Staphylococcus_phage	100.0	6.2e-129
AVG65301.1|18312_19239_+	protein rep	NA	NA	NA	NA	NA
AVG65302.1|19870_20617_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
AVG65303.1|20966_21641_+|transposase	IS6 family transposase IS257R1	transposase	A0A0N9SKD3	Staphylococcus_phage	100.0	6.2e-129
AVG65304.1|21682_22558_-	protein rep	NA	NA	NA	NA	NA
AVG65305.1|22802_24065_-	Plasmid recombination enzyme type 2	NA	NA	NA	NA	NA
AVG65306.1|24571_24976_-	bleomycin binding protein	NA	NA	NA	NA	NA
AVG65307.1|25192_25963_-	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	NA	NA	NA	NA	NA
AVG65308.1|26122_26269_-	replication domain protein	NA	A0A286QS97	Streptococcus_phage	58.1	2.7e-05
AVG65309.1|26312_26987_+|transposase	IS6 family transposase IS257R2	transposase	A0A0N9RU54	Staphylococcus_phage	100.0	8.1e-129
AVG65310.1|27095_27284_-	regulator	NA	NA	NA	NA	NA
AVG65311.1|27455_28430_+	transfer complex protein TraA	NA	NA	NA	NA	NA
AVG65312.1|28446_28764_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65313.1|28823_29231_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65314.1|29217_29901_+	traD	NA	NA	NA	NA	NA
AVG65315.1|29921_31934_+	DUF87 domain-containing protein	NA	NA	NA	NA	NA
AVG65316.1|31945_33226_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65317.1|33243_34320_+	CHAP domain-containing protein	NA	W5R8Q8	Staphylococcus_phage	36.8	2.4e-10
AVG65318.1|34329_34815_+	conjugal transfer protein TraH	NA	NA	NA	NA	NA
AVG65319.1|34830_36933_+	DNA topoisomerase III	NA	F2Y1B5	Organic_Lake_phycodnavirus	24.6	1.4e-09
AVG65320.1|36948_37413_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65321.1|37409_39050_+	type VI secretion protein	NA	NA	NA	NA	NA
AVG65322.1|39127_40045_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65323.1|40061_40454_+	single-stranded DNA-binding protein	NA	A0A1P8VVS8	Streptococcus_phage	38.4	1.3e-14
AVG65324.1|40715_41390_+|transposase	IS6 family transposase IS257-1	transposase	A0A0N9RU54	Staphylococcus_phage	98.2	3.8e-126
AVG65325.1|41493_42417_+	replication protein	NA	NA	NA	NA	NA
AVG65326.1|42949_43171_-	hypothetical protein	NA	NA	NA	NA	NA
AVG65327.1|43388_43712_-	quaternary ammonium compound efflux SMR transporter QacC	NA	NA	NA	NA	NA
AVG65328.1|44019_44250_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65329.1|44279_44954_+|transposase	IS6 family transposase IS257-1	transposase	A0A0N9RU54	Staphylococcus_phage	98.2	3.8e-126
AVG65343.1|45445_45838_+	N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	6.9e-72
AVG65330.1|45838_47278_+	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	NA	A0A1X9I6C2	Streptococcus_phage	100.0	3.8e-285
AVG65331.1|47850_48516_-|transposase	IS6 family transposase IS257-2	transposase	A0A0N9RU54	Staphylococcus_phage	91.6	5.9e-108
AVG65332.1|48973_49648_+|transposase	IS6 family transposase IS257-3	transposase	A0A0N9RU54	Staphylococcus_phage	97.3	2.2e-126
AVG65333.1|49679_50102_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	100.0	1.0e-68
AVG65334.1|50111_50597_-	trimethoprim-resistant dihydrofolate reductase DfrC	NA	A0A0N9S8H6	Staphylococcus_phage	100.0	1.1e-90
AVG65335.1|50638_51595_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	100.0	1.1e-190
AVG65336.1|51708_52383_+|transposase	IS6 family transposase IS257R2	transposase	A0A0N9RU54	Staphylococcus_phage	100.0	8.1e-129
AVG65337.1|52822_53206_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
AVG65338.1|53187_53397_+	hypothetical protein	NA	NA	NA	NA	NA
AVG65339.1|53383_54394_+	protein rlx	NA	NA	NA	NA	NA
AVG65344.1|54506_54902_+	mobilization protein	NA	NA	NA	NA	NA
AVG65340.1|56598_57273_+|transposase	IS6 family transposase IS257-3	transposase	A0A0N9RU54	Staphylococcus_phage	97.3	2.2e-126
