assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_000988745.3_ASM98874v3	CP011381	Moraxella bovoculi strain 58086, complete genome	1	51957-53323	1,1,1,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR	no	csa3,cas12a,cas4,cas1,cas2	csa3,cas12a,cas4,cas1,cas2,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,DEDDh,cas3,cas5,cas8c,cas7,cas14j	Type I-A,Type V-A	GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT,GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT,GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT,GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT,GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT	36,36,36,36,36	0	0	NA	NA	NA:NA:NA:NA:NA	21,21,14,14,14	21	TypeI-A,TypeV-A	csa3,cas12a,cas4,cas1,cas2,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,DEDDh,cas3,cas5,cas8c,cas7,cas14j	NA,NA	NA|537aa|up_9|CP011381.2_38968_40579_+	PRK15104, PRK15104, oligopeptide ABC transporter substrate-binding protein OppA; Provisional	NA|330aa|up_8|CP011381.2_40876_41866_-	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	csa3|105aa|up_7|CP011381.2_41981_42296_-	COG0640, ArsR, Predicted transcriptional regulators [Transcription]	NA|301aa|up_6|CP011381.2_42443_43346_+	cd02558, PSRA_1, Pseudouridine synthase, a subgroup of the RluA family	NA|167aa|up_5|CP011381.2_43461_43962_+	PRK09372, PRK09372, ribonuclease E inhibitor RraA	NA|404aa|up_4|CP011381.2_44238_45450_+	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional	cas12a|1361aa|up_3|CP011381.2_45783_49866_+	TIGR04330, conserved_hypothetical_protein, CRISPR-associated protein Cpf1, subtype PREFRAN	cas4|185aa|up_2|CP011381.2_49912_50467_+	TIGR04328, hypothetical_protein_HMPREF9709_01098, CRISPR-associated protein Cas4, subtype PREFRAN	cas1|343aa|up_1|CP011381.2_50480_51509_+	TIGR04329, hypothetical_protein_SbacW_07302_partial, CRISPR-associated endonuclease Cas1, subtype PREFRAN	cas2|90aa|up_0|CP011381.2_51505_51775_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|304aa|down_0|CP011381.2_53471_54383_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|399aa|down_1|CP011381.2_54476_55673_+	PRK09257, PRK09257, aromatic amino acid transaminase	NA|501aa|down_2|CP011381.2_55818_57321_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|403aa|down_3|CP011381.2_57593_58802_+	TIGR04407, LptF_YjgP, LPS export ABC transporter permease LptF	NA|364aa|down_4|CP011381.2_58798_59890_+	TIGR04408, LptG_lptG, LPS export ABC transporter permease LptG	NA|245aa|down_5|CP011381.2_59943_60678_-	PRK09468, ompR, osmolarity response regulator; Provisional	NA|792aa|down_6|CP011381.2_60953_63329_+	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|425aa|down_7|CP011381.2_63512_64787_-	PRK05614, gltA, citrate synthase	NA|130aa|down_8|CP011381.2_65721_66111_+	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit	NA|119aa|down_9|CP011381.2_66110_66467_+	cd03494, SQR_TypeC_SdhD, Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase D (SdhD) subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol
GCA_000988745.3_ASM98874v3	CP011381	Moraxella bovoculi strain 58086, complete genome	2	452173-453312	2,2,4	CRISPRCasFinder,CRT,PILER-CR	no	csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,cas2,cas1	csa3,cas12a,cas4,cas1,cas2,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,DEDDh,cas3,cas5,cas8c,cas7,cas14j	Type III-D,Type III-A,Type III-B,Type III-C	GTCTTAATCCCTTTTATAACAGGGAAGGTTTTGAAC,GTCTTAATCCCTTTTATAACAGGGAAGGTTTTGAAC,GTCTTAATCCCTTTTATAACAGGGAAGGTTTTGAAC	36,36,36	1	1	452830-452862	CP011381.2_466541-466509	NA:NA:NA	16,16,15	16	TypeIII-D,TypeIII-A,TypeIII-B,TypeIII-C	csa3,cas12a,cas4,cas1,cas2,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,DEDDh,cas3,cas5,cas8c,cas7,cas14j	NA|123aa|up_9|CP011381.2_443745_444114_-,NA|66aa|up_1|CP011381.2_450619_450817_+,NA|81aa|down_0|CP011381.2_453979_454222_+,NA|101aa|down_1|CP011381.2_454215_454518_+	NA|123aa|up_9|CP011381.2_443745_444114_-	NA	NA|138aa|up_8|CP011381.2_444434_444848_-	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|394aa|up_7|CP011381.2_444847_446029_-	COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]	NA|251aa|up_6|CP011381.2_446097_446850_-	PRK05406, PRK05406, 5-oxoprolinase subunit PxpA	NA|308aa|up_5|CP011381.2_446880_447804_-	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|229aa|up_4|CP011381.2_447822_448509_-	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]	NA|460aa|up_3|CP011381.2_448523_449903_-	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|158aa|up_2|CP011381.2_449912_450386_-	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|66aa|up_1|CP011381.2_450619_450817_+	NA	NA|355aa|up_0|CP011381.2_450864_451929_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|81aa|down_0|CP011381.2_453979_454222_+	NA	NA|101aa|down_1|CP011381.2_454215_454518_+	NA	csx1|381aa|down_2|CP011381.2_454594_455737_+	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	cmr1gr7|430aa|down_3|CP011381.2_455699_456989_+	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cas10|605aa|down_4|CP011381.2_456999_458814_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr3gr5|393aa|down_5|CP011381.2_458810_459989_+	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cmr4gr7|293aa|down_6|CP011381.2_460028_460907_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|119aa|down_7|CP011381.2_460908_461265_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr6gr7|374aa|down_8|CP011381.2_461261_462383_+	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	csx1|181aa|down_9|CP011381.2_462398_462941_+	TIGR02221, CRISPR-associated_protein_Csx1_2, CRISPR-associated protein, TM1812 family
GCA_000988745.3_ASM98874v3	CP011381	Moraxella bovoculi strain 58086, complete genome	3	472067-473068	5,3,3	PILER-CR,CRISPRCasFinder,CRT	no	csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,cas2,cas1	csa3,cas12a,cas4,cas1,cas2,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,DEDDh,cas3,cas5,cas8c,cas7,cas14j	Type III-D,Type III-A,Type III-B,Type III-C	GTCTTAATCCCTTTTATAACAGGGAAGGTTTTGAAC,GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC,GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC	36,36,36	1	1	472379-472411	CP011381.2_124848-124880	NA:NA:NA	13,14,14	14	TypeIII-D,TypeIII-A,TypeIII-B,TypeIII-C	csa3,cas12a,cas4,cas1,cas2,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,DEDDh,cas3,cas5,cas8c,cas7,cas14j	NA|100aa|up_9|CP011381.2_465037_465337_+,NA|83aa|up_8|CP011381.2_465573_465822_+,NA|277aa|up_4|CP011381.2_468625_469456_+,NA	NA|100aa|up_9|CP011381.2_465037_465337_+	NA	NA|83aa|up_8|CP011381.2_465573_465822_+	NA	NA|244aa|up_7|CP011381.2_465950_466682_+	cd05233, SDR_c, classical (c) SDRs	NA|332aa|up_6|CP011381.2_466683_467679_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	cas6|287aa|up_5|CP011381.2_467687_468548_+	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	NA|277aa|up_4|CP011381.2_468625_469456_+	NA	NA|250aa|up_3|CP011381.2_469474_470224_+	COG3145, AlkB, Alkylated DNA repair protein [DNA replication, recombination, and repair]	cas2|89aa|up_2|CP011381.2_470232_470499_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|330aa|up_1|CP011381.2_470523_471513_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|102aa|up_0|CP011381.2_471519_471825_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|875aa|down_0|CP011381.2_473403_476028_+	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|459aa|down_1|CP011381.2_476484_477861_+	PRK06931, PRK06931, diaminobutyrate--2-oxoglutarate transaminase	NA|663aa|down_2|CP011381.2_477963_479952_+	COG2189, COG2189, Adenine specific DNA methylase Mod [DNA replication, recombination, and repair]	NA|871aa|down_3|CP011381.2_479970_482583_+	COG3587, COG3587, Restriction endonuclease [Defense mechanisms]	NA|515aa|down_4|CP011381.2_482633_484178_+	COG0076, GadB, Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]	NA|306aa|down_5|CP011381.2_484086_485004_+	pfam01904, DUF72, Protein of unknown function DUF72	NA|190aa|down_6|CP011381.2_485048_485618_-	sd00010, SLR, Sel1-like repeat	NA|206aa|down_7|CP011381.2_485808_486426_-	TIGR02081, conserved_hypothetical_protein, methionine biosynthesis protein MetW	NA|416aa|down_8|CP011381.2_486439_487687_-	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|482aa|down_9|CP011381.2_487801_489247_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
GCA_000988745.3_ASM98874v3	CP011381	Moraxella bovoculi strain 58086, complete genome	4	834774-842456	6,4,4,7	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	csa3,cas12a,cas4,cas1,cas2,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,DEDDh,cas3,cas5,cas8c,cas7,cas14j	Type I-C, Type I-U?,Type I-U	ATCGCACCCCATACGGGTGCGTGTGTTGAAAC,ATCGCACCCCATACGGGTGCGTGTGTTGAAAC,ATCGCACCCCATACGGGTGCGTGTGTTGAAAC,ATCGCACCCCATACGGGTGCGTGTGTTGAAAC	32,32,32,32	0	0	NA	NA	NA:NA:NA:NA	112,116,116,112	116	TypeI-C,TypeI-U?,TypeI-U	csa3,cas12a,cas4,cas1,cas2,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,DEDDh,cas3,cas5,cas8c,cas7,cas14j	NA|72aa|up_9|CP011381.2_822648_822864_+,NA|87aa|down_2|CP011381.2_844669_844930_-,NA|114aa|down_4|CP011381.2_846455_846797_-,NA|96aa|down_7|CP011381.2_856128_856416_+,NA|176aa|down_9|CP011381.2_857537_858065_+	NA|72aa|up_9|CP011381.2_822648_822864_+	NA	NA|463aa|up_8|CP011381.2_822988_824377_-	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|387aa|up_7|CP011381.2_824507_825668_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	cas3|812aa|up_6|CP011381.2_825795_828231_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|246aa|up_5|CP011381.2_828253_828991_+	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|678aa|up_4|CP011381.2_828987_831021_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|281aa|up_3|CP011381.2_831039_831882_+	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas4|204aa|up_2|CP011381.2_831871_832483_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|338aa|up_1|CP011381.2_833264_834278_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|CP011381.2_834284_834575_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|204aa|down_0|CP011381.2_842580_843192_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|413aa|down_1|CP011381.2_843329_844568_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|87aa|down_2|CP011381.2_844669_844930_-	NA	NA|308aa|down_3|CP011381.2_845547_846471_+	PHA01513, mnt, Mnt	NA|114aa|down_4|CP011381.2_846455_846797_-	NA	NA|98aa|down_5|CP011381.2_846846_847140_-	COG2732, COG2732, Barstar, RNAse (barnase) inhibitor [Transcription]	NA|2632aa|down_6|CP011381.2_848249_856145_+	pfam13332, Fil_haemagg_2, Haemagluttinin repeat	NA|96aa|down_7|CP011381.2_856128_856416_+	NA	NA|373aa|down_8|CP011381.2_856422_857541_+	pfam04829, PT-VENN, Pre-toxin domain with VENN motif	NA|176aa|down_9|CP011381.2_857537_858065_+	NA
GCA_000988745.3_ASM98874v3	CP011381	Moraxella bovoculi strain 58086, complete genome	5	864477-864644	8,5	PILER-CR,CRISPRCasFinder	no		csa3,cas12a,cas4,cas1,cas2,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,DEDDh,cas3,cas5,cas8c,cas7,cas14j	Orphan	AAGTAAGATCGCACCCCATACGGGTGCGTGTGTTGAAACT,GATCGCACCCCATACGGGTGCGTGTGTTGAAACT	40,34	0	0	NA	NA	NA:NA	2,2	2	Orphan	csa3,cas12a,cas4,cas1,cas2,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csx16,cas6,DEDDh,cas3,cas5,cas8c,cas7,cas14j	NA|96aa|up_7|CP011381.2_856128_856416_+,NA|176aa|up_5|CP011381.2_857537_858065_+,NA|434aa|up_4|CP011381.2_858098_859400_+,NA|90aa|up_3|CP011381.2_859399_859669_+,NA|164aa|up_1|CP011381.2_861807_862299_+,NA|90aa|down_3|CP011381.2_866896_867166_+,NA|105aa|down_4|CP011381.2_867511_867826_+,NA|289aa|down_9|CP011381.2_874421_875288_+	NA|98aa|up_9|CP011381.2_846846_847140_-	COG2732, COG2732, Barstar, RNAse (barnase) inhibitor [Transcription]	NA|2632aa|up_8|CP011381.2_848249_856145_+	pfam13332, Fil_haemagg_2, Haemagluttinin repeat	NA|96aa|up_7|CP011381.2_856128_856416_+	NA	NA|373aa|up_6|CP011381.2_856422_857541_+	pfam04829, PT-VENN, Pre-toxin domain with VENN motif	NA|176aa|up_5|CP011381.2_857537_858065_+	NA	NA|434aa|up_4|CP011381.2_858098_859400_+	NA	NA|90aa|up_3|CP011381.2_859399_859669_+	NA	NA|139aa|up_2|CP011381.2_861387_861804_+	pfam15540, Ntox47, Bacterial toxin 47	NA|164aa|up_1|CP011381.2_861807_862299_+	NA	NA|621aa|up_0|CP011381.2_862418_864281_+	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|160aa|down_0|CP011381.2_864983_865463_+	pfam02542, YgbB, YgbB family	NA|193aa|down_1|CP011381.2_865510_866089_+	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases	NA|112aa|down_2|CP011381.2_866335_866671_+	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family	NA|90aa|down_3|CP011381.2_866896_867166_+	NA	NA|105aa|down_4|CP011381.2_867511_867826_+	NA	NA|630aa|down_5|CP011381.2_867910_869800_+	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|318aa|down_6|CP011381.2_869907_870861_+	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|382aa|down_7|CP011381.2_871966_873112_-	COG2850, COG2850, Uncharacterized conserved protein [Function unknown]	NA|379aa|down_8|CP011381.2_873266_874403_+	PRK11805, PRK11805, 50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA|289aa|down_9|CP011381.2_874421_875288_+	NA
