The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033381	Methylomonas sp. LW13 chromosome, complete genome	5233523	478290	489594	5233523		Bacillus_virus(28.57%)	9	NA	NA
QBC25812.1|478290_479289_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	47.4	3.0e-79
QBC25813.1|479285_480176_-	protoheme IX farnesyltransferase	NA	NA	NA	NA	NA
QBC25814.1|480283_481654_+	insulinase family protein	NA	G3MBJ8	Bacillus_virus	24.9	1.7e-24
QBC25815.1|481643_482942_+	insulinase family protein	NA	G3MBJ8	Bacillus_virus	23.2	3.6e-16
QBC25816.1|482943_483528_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
QBC25817.1|483554_484040_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.8	8.6e-32
QBC25818.1|484042_484288_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	55.7	3.2e-19
QBC25819.1|484395_485445_+	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2K9L7I1	Tupanvirus	43.6	4.7e-83
QBC25820.1|485631_489594_+	PAS domain S-box protein	NA	A0A1V0SGX0	Hokovirus	28.2	2.0e-54
>prophage 2
CP033381	Methylomonas sp. LW13 chromosome, complete genome	5233523	992712	1001689	5233523		uncultured_Mediterranean_phage(33.33%)	8	NA	NA
QBC26230.1|992712_993282_-	DNA mismatch repair protein MutS	NA	A0A0P0IDT4	Acinetobacter_phage	34.9	1.9e-17
QBC26231.1|993346_994102_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	57.0	4.6e-80
QBC26232.1|994098_994761_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	50.3	2.4e-40
QBC26233.1|994830_995757_-	peptidase M10A and M12B matrixin and adamalysin	NA	NA	NA	NA	NA
QBC26234.1|996119_998888_+	molecular chaperone DnaK	NA	A0A2H4UU19	Bodo_saltans_virus	27.7	1.0e-12
QBC29797.1|999018_1000119_+	radical SAM protein	NA	NA	NA	NA	NA
QBC26235.1|1000128_1001115_+	SDR family oxidoreductase	NA	Q58M85	Prochlorococcus_phage	40.5	2.9e-50
QBC26236.1|1001125_1001689_+	SIS domain-containing protein	NA	A0A067XQR2	Caulobacter_phage	36.5	1.3e-15
>prophage 3
CP033381	Methylomonas sp. LW13 chromosome, complete genome	5233523	1329831	1342748	5233523	protease	Bacillus_virus(25.0%)	11	NA	NA
QBC26506.1|1329831_1330335_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	44.7	3.1e-16
QBC26507.1|1330615_1331647_+	LysM peptidoglycan-binding domain-containing protein	NA	G3MBQ1	Bacillus_virus	56.8	3.2e-07
QBC29819.1|1331757_1332813_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
QBC26508.1|1332821_1333289_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
QBC26509.1|1333305_1335627_+	type I DNA topoisomerase	NA	A0A0G2Y787	Acanthamoeba_polyphaga_mimivirus	38.5	4.8e-104
QBC26510.1|1335629_1336088_-	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	34.3	2.8e-08
QBC26511.1|1336349_1337645_+	trigger factor	NA	NA	NA	NA	NA
QBC26512.1|1337679_1338297_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	54.9	4.1e-55
QBC26513.1|1338400_1339678_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	57.5	1.7e-132
QBC26514.1|1339850_1342268_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	51.6	4.2e-220
QBC26515.1|1342475_1342748_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	55.1	5.0e-21
>prophage 4
CP033381	Methylomonas sp. LW13 chromosome, complete genome	5233523	2703161	2728975	5233523	tail,integrase,capsid,protease,transposase	Salmonella_phage(20.0%)	25	2710116:2710163	2730019:2730066
QBC27598.1|2703161_2703911_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QBC27599.1|2704075_2707339_+	hypothetical protein	NA	NA	NA	NA	NA
QBC27600.1|2707482_2708358_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
QBC27601.1|2708418_2709459_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
QBC27602.1|2709499_2709979_-	hypothetical protein	NA	NA	NA	NA	NA
2710116:2710163	attL	TCTGGTAGCGGGGGCAGGATTTGAACCTACGACCTTCGGGTTATGAGC	NA	NA	NA	NA
QBC27603.1|2710397_2712047_-|tail	phage tail tape measure protein	tail	M1FQW0	Enterobacteria_phage	28.7	6.5e-47
QBC27604.1|2712064_2712382_-	hypothetical protein	NA	NA	NA	NA	NA
QBC29914.1|2712403_2712616_-	hypothetical protein	NA	NA	NA	NA	NA
QBC27605.1|2713017_2713515_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QBC27606.1|2713642_2714209_+	hypothetical protein	NA	NA	NA	NA	NA
QBC27607.1|2714624_2715059_-	hypothetical protein	NA	NA	NA	NA	NA
QBC27608.1|2715262_2715823_+	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	83.1	9.9e-48
QBC27609.1|2715825_2718792_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	76.0	0.0e+00
QBC27610.1|2718836_2719334_-	hypothetical protein	NA	NA	NA	NA	NA
QBC27611.1|2719396_2720743_-|capsid	phage major capsid protein	capsid	A0A0R6PJ54	Moraxella_phage	32.4	1.9e-28
QBC27612.1|2720769_2721555_-|protease	Clp protease ClpP	protease	K7PKX4	Enterobacterial_phage	47.4	1.1e-39
QBC27613.1|2721879_2722143_-	hypothetical protein	NA	NA	NA	NA	NA
QBC27614.1|2722298_2724533_-	hypothetical protein	NA	A0A173H0P8	Pseudoalteromonas_phage	34.2	2.4e-44
QBC27615.1|2724778_2725030_-	hypothetical protein	NA	NA	NA	NA	NA
QBC27616.1|2725307_2726357_-	hypothetical protein	NA	NA	NA	NA	NA
QBC27617.1|2726469_2726769_-	addiction module antidote protein, HigA family	NA	A0A2P1MXE5	Escherichia_phage	45.9	1.1e-08
QBC27618.1|2726765_2727080_-	putative addiction module antidote protein	NA	A0A141GEX5	Brucella_phage	45.6	1.6e-07
QBC27619.1|2727072_2727402_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	50.6	4.5e-16
QBC27620.1|2727446_2727899_-	hypothetical protein	NA	NA	NA	NA	NA
QBC27621.1|2727901_2728975_-|integrase	site-specific integrase	integrase	A0A088CD23	Shigella_phage	26.3	5.4e-18
2730019:2730066	attR	TCTGGTAGCGGGGGCAGGATTTGAACCTACGACCTTCGGGTTATGAGC	NA	NA	NA	NA
>prophage 5
CP033381	Methylomonas sp. LW13 chromosome, complete genome	5233523	3453159	3467949	5233523		Ostreococcus_lucimarinus_virus(20.0%)	14	NA	NA
QBC28229.1|3453159_3454473_-	lipopolysaccharide biosynthesis protein RfbH	NA	A0A218MN59	uncultured_virus	33.4	2.5e-57
QBC28230.1|3454498_3455581_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	27.3	9.3e-18
QBC28231.1|3455574_3456342_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
QBC28232.1|3456374_3457376_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
QBC28233.1|3457375_3458452_-	3-dehydroquinate synthase	NA	A0A0P0C619	Ostreococcus_mediterraneus_virus	32.5	1.0e-32
QBC28234.1|3458435_3459128_-	SDR family oxidoreductase	NA	E5ERI5	Ostreococcus_lucimarinus_virus	35.1	3.4e-29
QBC29958.1|3459141_3459945_-	aldolase	NA	E5ERI3	Ostreococcus_lucimarinus_virus	32.5	2.0e-17
QBC28235.1|3460040_3460580_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.8	2.3e-49
QBC28236.1|3460579_3461464_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	61.3	1.6e-100
QBC28237.1|3461466_3462363_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	33.6	2.8e-28
QBC29959.1|3462387_3463458_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	46.7	3.7e-83
QBC28238.1|3463568_3464252_-	sensor histidine kinase	NA	NA	NA	NA	NA
QBC28239.1|3464256_3465885_-	response regulator	NA	NA	NA	NA	NA
QBC28240.1|3466011_3467949_+	molecular chaperone HtpG	NA	A0A1V0SAD6	Catovirus	35.0	4.0e-112
>prophage 6
CP033381	Methylomonas sp. LW13 chromosome, complete genome	5233523	4147995	4180187	5233523	transposase,integrase	Rhizobium_phage(14.29%)	33	4154879:4154927	4182085:4182133
QBC28784.1|4147995_4149093_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QBC28785.1|4149439_4150447_-	DUF4325 domain-containing protein	NA	NA	NA	NA	NA
QBC28786.1|4150585_4151353_-|integrase	site-specific integrase	integrase	L7TK95	Rhizobium_phage	29.1	2.6e-14
QBC28787.1|4153165_4153516_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
QBC28788.1|4153503_4153815_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
QBC28789.1|4153863_4154364_-	hypothetical protein	NA	NA	NA	NA	NA
QBC28790.1|4154363_4154636_-	hypothetical protein	NA	NA	NA	NA	NA
4154879:4154927	attL	TGGTGGGTCGTGTGCGATTCGAACGCACGACCATCGCATTAAAAGTGCA	NA	NA	NA	NA
QBC28791.1|4155146_4155407_+	hypothetical protein	NA	NA	NA	NA	NA
QBC28792.1|4155396_4155783_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
QBC28793.1|4156165_4156636_+	hypothetical protein	NA	NA	NA	NA	NA
QBC28794.1|4156852_4157272_-	DUF1993 domain-containing protein	NA	NA	NA	NA	NA
QBC28795.1|4157270_4157522_+	hypothetical protein	NA	NA	NA	NA	NA
QBC28796.1|4157553_4157805_+	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA	NA
QBC28797.1|4157794_4158082_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
QBC28798.1|4158456_4159731_-	three-Cys-motif partner protein TcmP	NA	NA	NA	NA	NA
QBC28799.1|4159757_4160507_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QBC29999.1|4160593_4161331_-	phage Gp37/Gp68 family protein	NA	A0A088F7U1	Mycobacterium_phage	42.0	4.8e-58
QBC28800.1|4161648_4164384_-	type III restriction endonuclease subunit R	NA	NA	NA	NA	NA
QBC28801.1|4164380_4164734_-	DUF86 domain-containing protein	NA	NA	NA	NA	NA
QBC28802.1|4164726_4165017_-	DNA polymerase subunit beta	NA	NA	NA	NA	NA
QBC28803.1|4165153_4166860_-	site-specific DNA-methyltransferase	NA	A0A0M7Q8J6	Escherichia_phage	46.1	1.1e-97
QBC28804.1|4166864_4169186_-	hypothetical protein	NA	NA	NA	NA	NA
QBC28805.1|4169366_4169597_-	hypothetical protein	NA	NA	NA	NA	NA
QBC28806.1|4169593_4172500_-	DEAD/DEAH box helicase	NA	A0A2H4J643	uncultured_Caudovirales_phage	41.0	1.4e-206
QBC28807.1|4172691_4172994_+	hypothetical protein	NA	NA	NA	NA	NA
QBC28808.1|4173212_4174439_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	47.6	8.0e-50
QBC28809.1|4174964_4175315_+	type I restriction endonuclease subunit M	NA	NA	NA	NA	NA
QBC28810.1|4175393_4175966_+	hypothetical protein	NA	NA	NA	NA	NA
QBC28811.1|4176102_4176597_+	DNA repair protein RadC	NA	NA	NA	NA	NA
QBC28812.1|4176821_4177109_+	hypothetical protein	NA	NA	NA	NA	NA
QBC28813.1|4177105_4178092_+|integrase	site-specific integrase	integrase	A0A1B1P7C7	Bacillus_phage	27.9	5.9e-11
QBC28814.1|4178245_4178662_+	hypothetical protein	NA	NA	NA	NA	NA
QBC28815.1|4179173_4180187_+|integrase	site-specific integrase	integrase	Q7Y5X7	Haemophilus_phage	35.3	1.6e-40
4182085:4182133	attR	TGGTGGGTCGTGTGCGATTCGAACGCACGACCATCGCATTAAAAGTGCA	NA	NA	NA	NA
>prophage 7
CP033381	Methylomonas sp. LW13 chromosome, complete genome	5233523	4761901	4770002	5233523	tRNA	Pandoravirus(16.67%)	7	NA	NA
QBC30029.1|4761901_4763194_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	33.2	3.2e-49
QBC29338.1|4763213_4764374_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	57.4	1.5e-127
QBC29339.1|4764552_4766364_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.9	3.0e-37
QBC29340.1|4766440_4768180_-	DNA primase	NA	A0A1S5RF71	Helicobacter_phage	33.9	4.5e-46
QBC29341.1|4768195_4768645_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	51.1	1.6e-27
QBC29342.1|4768653_4768887_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
QBC29343.1|4768991_4770002_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	53.4	1.9e-97
