assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_000493295.2_ASM49329v2	CP019189	Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 chromosome, complete genome	1	620775-621023	1	PILER-CR	no		RT,cas3,PD-DExK,WYL,cas8e,cse2gr11,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,Cas9_archaeal	Orphan	TTTTACAGGGCGACAGGATGAATGACTGTCCACGACACTATACCCAAAAGAAA	53	0	0	NA	NA	NA	2	2	Orphan	RT,cas3,PD-DExK,WYL,cas8e,cse2gr11,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,Cas9_archaeal	NA,NA|55aa|down_8|CP019189.1_633279_633444_-	NA|269aa|up_9|CP019189.1_608994_609801_-	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|476aa|up_8|CP019189.1_609787_611215_-	COG1299, FruA, Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism]	NA|305aa|up_7|CP019189.1_611241_612156_-	TIGR03828, pfkB, 1-phosphofructokinase	NA|285aa|up_6|CP019189.1_612166_613021_-	PRK12737, gatY, tagatose-bisphosphate aldolase subunit GatY	NA|278aa|up_5|CP019189.1_613354_614188_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|316aa|up_4|CP019189.1_614198_615146_+	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)	NA|524aa|up_3|CP019189.1_615385_616957_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|257aa|up_2|CP019189.1_617486_618257_+	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|297aa|up_1|CP019189.1_618282_619173_+	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|382aa|up_0|CP019189.1_619270_620416_+	PRK10342, PRK10342, glycerate kinase I; Provisional	NA|313aa|down_0|CP019189.1_621769_622708_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|down_1|CP019189.1_622805_623795_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|down_2|CP019189.1_623815_625147_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|down_3|CP019189.1_625213_626422_+	PRK12379, PRK12379, propionate kinase	NA|765aa|down_4|CP019189.1_626455_628750_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|455aa|down_5|CP019189.1_628819_630184_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|down_6|CP019189.1_630499_631831_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|down_7|CP019189.1_631856_633167_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|55aa|down_8|CP019189.1_633279_633444_-	NA	NA|234aa|down_9|CP019189.1_633467_634169_-	COG1741, COG1741, Pirin-related protein [General function prediction only]
GCA_000493295.2_ASM49329v2	CP019189	Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 chromosome, complete genome	2	979510-979843	2,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas5,cas6e,cas1,cas2	RT,cas3,PD-DExK,WYL,cas8e,cse2gr11,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,Cas9_archaeal	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	4,5,5	5	TypeI-E	RT,cas3,PD-DExK,WYL,cas8e,cse2gr11,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,Cas9_archaeal	NA,NA|57aa|down_2|CP019189.1_981116_981287_+,NA|81aa|down_7|CP019189.1_987101_987344_-	NA|919aa|up_9|CP019189.1_966493_969250_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|432aa|up_8|CP019189.1_969307_970603_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_7|CP019189.1_970654_972889_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|119aa|up_6|CP019189.1_972973_973330_+	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription]	NA|99aa|up_5|CP019189.1_973295_973592_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|51aa|up_4|CP019189.1_973601_973754_-	PRK15261, PRK15261, fimbrial protein SteA; Provisional	NA|267aa|up_3|CP019189.1_974359_975160_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_2|CP019189.1_975387_977025_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_1|CP019189.1_977107_978406_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_0|CP019189.1_978541_979213_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|down_0|CP019189.1_979940_980738_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|down_1|CP019189.1_980825_981188_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|57aa|down_2|CP019189.1_981116_981287_+	NA	NA|600aa|down_3|CP019189.1_981623_983423_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_4|CP019189.1_983422_985135_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_5|CP019189.1_985210_985945_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|down_6|CP019189.1_986032_986986_-	PRK15379, PRK15379, type III secretion system effector SopD	NA|81aa|down_7|CP019189.1_987101_987344_-	NA	cas3|888aa|down_8|CP019189.1_987430_990094_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|down_9|CP019189.1_990105_991662_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1
GCA_000493295.2_ASM49329v2	CP019189	Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 chromosome, complete genome	3	995986-998273	2,2	CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas5,cas6e,cas1,cas2	RT,cas3,PD-DExK,WYL,cas8e,cse2gr11,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,Cas9_archaeal	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29	0	0	NA	NA	I-E:I-E	37,37	37	TypeI-E	RT,cas3,PD-DExK,WYL,cas8e,cse2gr11,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,Cas9_archaeal	NA|81aa|up_7|CP019189.1_987101_987344_-,NA	NA|245aa|up_9|CP019189.1_985210_985945_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|up_8|CP019189.1_986032_986986_-	PRK15379, PRK15379, type III secretion system effector SopD	NA|81aa|up_7|CP019189.1_987101_987344_-	NA	cas3|888aa|up_6|CP019189.1_987430_990094_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|up_5|CP019189.1_990105_991662_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|187aa|up_4|CP019189.1_991658_992219_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas5|249aa|up_3|CP019189.1_993300_994047_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|CP019189.1_994028_994679_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|CP019189.1_994675_995596_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|CP019189.1_995595_995889_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|349aa|down_0|CP019189.1_998287_999334_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|CP019189.1_999584_1000493_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|CP019189.1_1000502_1001942_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|CP019189.1_1001928_1002534_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|119aa|down_4|CP019189.1_1002551_1002908_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|CP019189.1_1003098_1003410_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|CP019189.1_1003428_1004139_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|CP019189.1_1004138_1004618_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|CP019189.1_1004614_1005664_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|CP019189.1_1005644_1006406_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
