The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP019197	Salmonella enterica subsp. enterica serovar Oranienburg str. 0250 strain CFSAN001285 chromosome, complete genome	4648879	1116571	1190936	4648879	plate,tRNA,head,tail,portal,integrase,capsid	Salmonella_phage(85.11%)	80	1127722:1127766	1161938:1161982
AUM44375.1|1116571_1117813_-|integrase	integrase	integrase	A0A1B5FPC6	Escherichia_phage	47.1	8.5e-100
AUM44376.1|1118318_1118522_+	AlpA family phage regulatory protein	NA	A0A1V0E8E5	Vibrio_phage	44.2	3.6e-08
AUM44377.1|1119441_1119819_-	hypothetical protein	NA	NA	NA	NA	NA
AUM44378.1|1119855_1120350_-	DUF4755 domain-containing protein	NA	NA	NA	NA	NA
AUM44379.1|1120712_1122014_-	hypothetical protein	NA	NA	NA	NA	NA
AUM44380.1|1122350_1122536_+	hypothetical protein	NA	NA	NA	NA	NA
AUM44381.1|1122532_1122868_+	hypothetical protein	NA	NA	NA	NA	NA
AUM44382.1|1122857_1123208_+	hypothetical protein	NA	NA	NA	NA	NA
AUM44383.1|1123200_1123611_+	hypothetical protein	NA	NA	NA	NA	NA
AUM44384.1|1123607_1123844_+	hypothetical protein	NA	NA	NA	NA	NA
AUM44385.1|1123845_1124310_+	hypothetical protein	NA	NA	NA	NA	NA
AUM44386.1|1124511_1126257_-	hypothetical protein	NA	NA	NA	NA	NA
AUM44387.1|1126333_1127554_-|integrase	integrase	integrase	A0A1B5FPC6	Escherichia_phage	81.7	2.3e-190
1127722:1127766	attL	TGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT	NA	NA	NA	NA
AUM44388.1|1127883_1128909_-|integrase	integrase	integrase	A0A1S6L016	Salmonella_phage	99.1	1.4e-201
AUM44389.1|1128912_1129545_-	phage repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	99.5	3.3e-116
AUM44390.1|1129664_1129907_+	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	100.0	1.1e-38
AUM44391.1|1129939_1130449_+	hypothetical protein	NA	A0A1S6L008	Salmonella_phage	95.3	5.4e-85
AUM44392.1|1130535_1130811_-	hypothetical protein	NA	NA	NA	NA	NA
AUM44393.1|1130895_1131090_+	hypothetical protein	NA	E5G6L4	Salmonella_phage	84.1	5.3e-25
AUM44394.1|1131053_1131395_+	hypothetical protein	NA	E5G6L5	Salmonella_phage	84.1	6.0e-48
AUM44395.1|1131462_1131690_+	hypothetical protein	NA	A0A0M3UL87	Salmonella_phage	64.0	8.1e-17
AUM44396.1|1131689_1131917_+	hypothetical protein	NA	E5G6L7	Salmonella_phage	66.7	5.4e-21
AUM44397.1|1131913_1132771_+	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	70.2	4.2e-114
AUM44398.1|1132767_1135182_+	endonuclease	NA	E5G6L9	Salmonella_phage	87.4	0.0e+00
AUM44399.1|1135336_1135525_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	96.8	1.6e-26
AUM44400.1|1135535_1135769_+	DNA damage-inducible protein DinI	NA	E5G6M1	Salmonella_phage	100.0	4.7e-36
AUM47601.1|1136371_1136560_+	hypothetical protein	NA	NA	NA	NA	NA
AUM44401.1|1136909_1137830_+	hypothetical protein	NA	NA	NA	NA	NA
AUM44402.1|1137822_1138563_+	restriction endonuclease	NA	NA	NA	NA	NA
AUM44403.1|1138592_1139642_-|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	95.6	1.9e-193
AUM44404.1|1139638_1141405_-	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	96.9	0.0e+00
AUM44405.1|1141547_1142381_+|capsid	capsid protein	capsid	E5G6M5	Salmonella_phage	97.1	1.1e-127
AUM44406.1|1142397_1143465_+|capsid	phage major capsid protein, P2 family	capsid	A0A1S6KZZ3	Salmonella_phage	98.0	2.8e-192
AUM44407.1|1143468_1144119_+	hypothetical protein	NA	A0A1S6KZX1	Salmonella_phage	98.6	1.6e-113
AUM44408.1|1144212_1144677_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	96.8	7.9e-83
AUM44409.1|1144676_1144880_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
AUM44410.1|1144883_1145099_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	100.0	5.9e-33
AUM47602.1|1145118_1145589_+	glycoside hydrolase	NA	A0A1S6KZY9	Salmonella_phage	97.4	2.2e-85
AUM44411.1|1145593_1145968_+	hypothetical protein	NA	NA	NA	NA	NA
AUM44412.1|1145964_1146393_+	hypothetical protein	NA	A0A1S6KZX8	Salmonella_phage	95.0	2.6e-64
AUM44413.1|1146322_1146526_+	hypothetical protein	NA	A0A1S6KZX6	Salmonella_phage	97.0	3.4e-30
AUM44414.1|1146488_1146920_+|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	95.1	4.0e-73
AUM44415.1|1146912_1147359_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	89.7	3.8e-66
AUM44416.1|1147427_1148006_+|plate	baseplate assembly protein	plate	E5G6N6	Salmonella_phage	99.0	1.5e-107
AUM44417.1|1148002_1148362_+|plate	baseplate assembly protein	plate	E5G6N7	Salmonella_phage	92.4	6.3e-56
AUM44418.1|1148348_1149257_+|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	97.7	7.2e-157
AUM44419.1|1149249_1149855_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	98.5	1.1e-116
AUM44420.1|1149851_1151660_+	hypothetical protein	NA	A0A1B0V7G4	Salmonella_phage	82.2	7.3e-209
AUM44421.1|1151666_1152074_+|tail	phage tail protein	tail	A0A1B0V844	Salmonella_phage	85.2	6.7e-62
AUM44422.1|1152077_1152665_-|tail	tail assembly chaperone	tail	A0A1B0VCD0	Salmonella_phage	84.1	1.9e-94
AUM44423.1|1153479_1154037_+	DNA-invertase	NA	A0A1S6L009	Salmonella_phage	98.4	1.0e-97
AUM44424.1|1154139_1155312_+|tail	phage tail protein	tail	A0A1S6KZY7	Salmonella_phage	99.5	3.7e-222
AUM44425.1|1155321_1155837_+|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	99.4	2.7e-92
AUM44426.1|1155891_1156194_+	hypothetical protein	NA	A0A1S6KZZ9	Salmonella_phage	100.0	2.5e-45
AUM44427.1|1156208_1156328_+|tail	phage tail protein	tail	E5G6Q0	Salmonella_phage	100.0	1.8e-15
AUM44428.1|1156320_1159128_+|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	98.3	0.0e+00
AUM44429.1|1159124_1159610_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	99.2	8.3e-67
AUM44430.1|1159606_1160707_+	late control protein D	NA	E5G6Q3	Salmonella_phage	95.6	9.0e-194
AUM47603.1|1160773_1160992_+	levansucrase regulator	NA	Q53ZE7	Salmonella_virus	76.4	8.3e-27
AUM44431.1|1161276_1161867_+	hypothetical protein	NA	A0A0P0ZC44	Stx2-converting_phage	75.9	4.4e-46
AUM47604.1|1162371_1163535_-	secretion protein HlyD	NA	NA	NA	NA	NA
1161938:1161982	attR	TGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTCCTACAT	NA	NA	NA	NA
AUM44432.1|1163542_1165723_-	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	9.9e-19
AUM44433.1|1165719_1167129_-	type I secretion protein TolC	NA	NA	NA	NA	NA
AUM44434.1|1167193_1178668_-	Ig-like domain repeat protein	NA	NA	NA	NA	NA
AUM47605.1|1179282_1179765_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
AUM44435.1|1179914_1180391_+	ubiquinone-binding protein	NA	NA	NA	NA	NA
AUM47606.1|1180395_1180671_+	RnfH family protein	NA	NA	NA	NA	NA
AUM44436.1|1180836_1181175_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
AUM44437.1|1181323_1182985_-	DNA repair protein RecN	NA	NA	NA	NA	NA
AUM44438.1|1183070_1183949_-	NAD(+) kinase	NA	NA	NA	NA	NA
AUM44439.1|1183945_1184107_-	inorganic polyphosphate kinase	NA	NA	NA	NA	NA
AUM44440.1|1184071_1184662_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
AUM44441.1|1184696_1185302_-	cytoplasmic protein	NA	NA	NA	NA	NA
AUM44442.1|1185431_1186673_-	magnesium/cobalt efflux protein	NA	NA	NA	NA	NA
AUM44443.1|1186737_1187529_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
AUM44444.1|1187474_1187771_-	hypothetical protein	NA	NA	NA	NA	NA
AUM44445.1|1187694_1189056_+	signal recognition particle protein	NA	NA	NA	NA	NA
AUM44446.1|1189308_1189557_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
AUM44447.1|1189575_1190124_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AUM44448.1|1190168_1190936_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
>prophage 2
CP019197	Salmonella enterica subsp. enterica serovar Oranienburg str. 0250 strain CFSAN001285 chromosome, complete genome	4648879	1691809	1700982	4648879	tRNA	Enterobacteria_phage(66.67%)	9	NA	NA
AUM44886.1|1691809_1692757_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	3.7e-10
AUM44887.1|1692740_1693472_+	ABC transporter permease	NA	NA	NA	NA	NA
AUM44888.1|1693452_1693560_-	hypothetical protein	NA	NA	NA	NA	NA
AUM44889.1|1693619_1694351_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
AUM47619.1|1694576_1696262_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.1	2.4e-278
AUM44890.1|1696258_1696978_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AUM44891.1|1697024_1697492_+	hypothetical protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
AUM44892.1|1698249_1698708_-	hypothetical protein	NA	Q9EYF5	Enterobacteria_phage	73.2	7.6e-54
AUM44893.1|1698948_1700982_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	6.1e-55
>prophage 3
CP019197	Salmonella enterica subsp. enterica serovar Oranienburg str. 0250 strain CFSAN001285 chromosome, complete genome	4648879	1879760	1887014	4648879		Morganella_phage(33.33%)	8	NA	NA
AUM45053.1|1879760_1880180_+	DNA polymerase V subunit UmuD	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
AUM45054.1|1880182_1881451_+	DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	91.9	2.4e-227
AUM45055.1|1881905_1882118_+	cold-shock protein CspJ	NA	A0A1W6JNX5	Morganella_phage	70.0	3.9e-21
AUM47625.1|1882128_1882317_+	cold-shock protein	NA	NA	NA	NA	NA
AUM45056.1|1882577_1883774_-	porin	NA	Q1MVN1	Enterobacteria_phage	56.9	1.5e-109
AUM45057.1|1884423_1884723_+	hypothetical protein	NA	NA	NA	NA	NA
AUM45058.1|1884814_1885510_+	phosphohydrolase	NA	A0A1D6Y7U0	Golden_Marseillevirus	27.1	2.8e-07
AUM45059.1|1885583_1887014_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.5	3.5e-105
>prophage 4
CP019197	Salmonella enterica subsp. enterica serovar Oranienburg str. 0250 strain CFSAN001285 chromosome, complete genome	4648879	2651124	2657103	4648879	tail,transposase	Escherichia_phage(42.86%)	9	NA	NA
AUM45805.1|2651124_2651364_+	virulence protein MsgA	NA	K7P6H1	Enterobacteria_phage	88.6	8.5e-33
AUM45806.1|2651574_2651739_-|transposase	transposase	transposase	NA	NA	NA	NA
AUM47661.1|2652236_2653046_+	cytolethal distending toxin subunit B-like protein	NA	A5LH53	Enterobacteria_phage	50.0	2.1e-62
AUM45807.1|2653118_2653496_+|tail	phage tail protein	tail	I1TQ41	Pseudomonas_phage	38.4	2.2e-14
AUM45808.1|2653643_2654186_-	hypothetical protein	NA	A0A0U2S643	Escherichia_phage	67.0	6.2e-71
AUM45809.1|2654369_2655098_-	pertussis toxin-like subunit ArtA	NA	A0A0U2KD26	Escherichia_phage	52.5	1.6e-61
AUM45810.1|2655114_2655528_-	subtilase cytotoxin subunit B	NA	A0A0U2KD34	Escherichia_phage	37.7	7.1e-19
AUM45811.1|2656133_2656391_+	hypothetical protein	NA	NA	NA	NA	NA
AUM45812.1|2656350_2657103_+|transposase	transposase	transposase	S5WIU1	Leptospira_phage	41.7	5.8e-43
