The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027541	Mycolicibacterium smegmatis MKD8 chromosome, complete genome	7119169	530931	579310	7119169	transposase	Corynebacterium_phage(37.5%)	45	NA	NA
AWT51442.1|530931_531219_+|transposase	transposase	transposase	NA	NA	NA	NA
AWT51443.1|531248_532070_+|transposase	transposase B	transposase	S5WIU1	Leptospira_phage	34.8	7.0e-34
AWT51444.1|532900_533770_+	carveol dehydrogenase	NA	NA	NA	NA	NA
AWT51445.1|533930_534779_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA	NA
AWT51446.1|534894_535623_+	2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase	NA	NA	NA	NA	NA
AWT51447.1|535619_536657_+	sorbitol dehydrogenase	NA	NA	NA	NA	NA
AWT51448.1|537043_537412_-	SnoaL-like domain protein	NA	NA	NA	NA	NA
AWT51449.1|537715_538804_+	D-ribose transporter subunit RbsB	NA	NA	NA	NA	NA
AWT51450.1|538867_540373_+	ribose transport ATP-binding protein RbsA	NA	A0A2H4PQG7	Staphylococcus_phage	27.7	8.1e-12
AWT51451.1|540369_541365_+	ribose transport system permease protein RbsC	NA	NA	NA	NA	NA
AWT51452.1|541361_542318_+	inner membrane ABC transporter permease protein YjfF	NA	NA	NA	NA	NA
AWT51453.1|542327_543554_+	agarase	NA	NA	NA	NA	NA
AWT51454.1|543583_544330_+	regulatory protein	NA	NA	NA	NA	NA
AWT51455.1|544524_545688_+	sugar-binding transcriptional regulator, LacI family protein	NA	NA	NA	NA	NA
AWT51456.1|545840_546758_+	ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components	NA	NA	NA	NA	NA
AWT51457.1|546754_548260_+	ribose transport ATP-binding protein RbsA	NA	A0A2H4PQG7	Staphylococcus_phage	23.2	1.1e-11
AWT51458.1|548261_549248_+	ribose transport system permease protein RbsC	NA	NA	NA	NA	NA
AWT51459.1|549240_549567_-	hypothetical protein	NA	NA	NA	NA	NA
AWT51460.1|550155_551646_-	major facilitator superfamily protein MFS_1	NA	NA	NA	NA	NA
AWT51461.1|551657_553100_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AWT51462.1|553152_554022_-	carveol dehydrogenase	NA	NA	NA	NA	NA
AWT51463.1|554363_555362_+	alcohol dehydrogenase	NA	NA	NA	NA	NA
AWT51464.1|555433_556537_-	aryl-alcohol dehydrogenase	NA	NA	NA	NA	NA
AWT51465.1|556848_557481_+	hypothetical protein	NA	NA	NA	NA	NA
AWT51466.1|557477_558545_+	maleylacetate reductase	NA	NA	NA	NA	NA
AWT51467.1|558546_559425_+	hydroxyquinol 1,2-dioxygenase	NA	NA	NA	NA	NA
AWT51468.1|559521_560376_-	carveol dehydrogenase	NA	NA	NA	NA	NA
AWT51469.1|561158_561593_+	ATP binding protein of ABC transporter	NA	G3M9Y6	Bacillus_virus	34.8	1.0e-07
AWT51470.1|561666_562902_+|transposase	transposase, Mutator family protein	transposase	A0A220NQR7	Corynebacterium_phage	44.2	9.4e-83
AWT51471.1|563128_563389_+	ATP binding protein of ABC transporter	NA	NA	NA	NA	NA
AWT51472.1|564301_564949_+	ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components	NA	NA	NA	NA	NA
AWT51473.1|565200_565995_+|transposase	transposase, Mutator family protein	transposase	A0A220NQR7	Corynebacterium_phage	43.3	3.5e-46
AWT51474.1|566127_566451_+	Transposase, Mutator family	NA	A0A220NQR7	Corynebacterium_phage	52.7	2.3e-17
AWT51475.1|566512_567844_+|transposase	transposase, Mutator family protein	transposase	NA	NA	NA	NA
AWT51476.1|568069_568480_+	Xylose isomerase-like TIM barrel	NA	NA	NA	NA	NA
AWT51477.1|570473_571340_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA	NA
AWT51478.1|571363_572074_-	regulatory protein GntR, HTH:GntR	NA	NA	NA	NA	NA
AWT51479.1|572244_573123_+	putative HpcE protein	NA	NA	NA	NA	NA
AWT51480.1|573125_574046_+	2,3-dihydroxybiphenyl 1,2-dioxygenase	NA	NA	NA	NA	NA
AWT51481.1|574087_574879_+	2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase	NA	V5L4T3	Hirudovirus	35.0	8.9e-10
AWT51482.1|574938_576237_+	histidinol dehydrogenase	NA	NA	NA	NA	NA
AWT51483.1|576233_576992_+	2-deoxy-D-gluconate 3-dehydrogenase	NA	NA	NA	NA	NA
AWT51484.1|577018_577435_+	hypothetical protein	NA	NA	NA	NA	NA
AWT51485.1|577605_577803_+	hypothetical protein	NA	NA	NA	NA	NA
AWT51486.1|578248_579310_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
CP027541	Mycolicibacterium smegmatis MKD8 chromosome, complete genome	7119169	1341009	1369194	7119169	transposase	Erysipelothrix_phage(37.5%)	18	NA	NA
AWT52224.1|1341009_1341852_-|transposase	IS1137, transposase orfB	transposase	Q8W6R2	Burkholderia_virus	53.1	6.2e-70
AWT52225.1|1341929_1342274_-|transposase	IS3 family protein element, transposase orfA	transposase	NA	NA	NA	NA
AWT52226.1|1342336_1343398_-|transposase	transposase	transposase	NA	NA	NA	NA
AWT52227.1|1343708_1343939_+	hypothetical protein	NA	NA	NA	NA	NA
AWT52228.1|1344310_1347688_+	hypothetical protein	NA	NA	NA	NA	NA
AWT52229.1|1347684_1352310_+	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	25.1	5.8e-85
AWT52230.1|1352532_1355583_+	type III restriction enzyme, res subunit	NA	A0A2K9V3E9	Faecalibacterium_phage	32.8	1.1e-31
AWT52231.1|1356164_1357040_-|transposase	transposase subunit	transposase	Q6H9S3	Enterobacteria_phage	34.3	5.5e-29
AWT52232.1|1357054_1357360_-	Transposase	NA	NA	NA	NA	NA
AWT52233.1|1357361_1358009_+	TnpC protein	NA	NA	NA	NA	NA
AWT52234.1|1357959_1358703_+	TnpC protein	NA	NA	NA	NA	NA
AWT52235.1|1358979_1359159_+	Helix-turn-helix domain protein	NA	A0A1B1IUF9	uncultured_Mediterranean_phage	46.2	3.2e-08
AWT52236.1|1359161_1362431_+	DEAD/DEAH box helicase	NA	A0A2K5B253	Erysipelothrix_phage	42.1	2.0e-228
AWT52237.1|1362427_1363093_+	hypothetical protein	NA	NA	NA	NA	NA
AWT52238.1|1363111_1364995_+	putative methyltransferase	NA	A0A2K5B2C1	Erysipelothrix_phage	38.1	1.5e-108
AWT52239.1|1365000_1368084_+	Type III restriction enzyme, res subunit	NA	A0A2K5B2C2	Erysipelothrix_phage	32.6	7.7e-126
AWT52240.1|1368372_1368606_-|transposase	transposase subunit	transposase	NA	NA	NA	NA
AWT52241.1|1368861_1369194_-|transposase	transposase subunit	transposase	NA	NA	NA	NA
>prophage 3
CP027541	Mycolicibacterium smegmatis MKD8 chromosome, complete genome	7119169	1727507	1736189	7119169		Mycobacterium_phage(100.0%)	13	NA	NA
AWT52582.1|1727507_1727942_-	Phage protein Gp19/Gp15/Gp42	NA	V5R501	Mycobacterium_phage	92.0	8.7e-60
AWT52583.1|1727941_1728130_-	hypothetical protein	NA	A0A2P1CJ76	Mycobacterium_phage	77.0	2.5e-19
AWT52584.1|1728116_1728287_-	hypothetical protein	NA	NA	NA	NA	NA
AWT52585.1|1728286_1728574_-	hypothetical protein	NA	NA	NA	NA	NA
AWT52586.1|1728961_1729762_-	hypothetical protein	NA	NA	NA	NA	NA
AWT52587.1|1729932_1730235_-	hypothetical protein	NA	G1DB56	Mycobacterium_phage	45.9	5.4e-08
AWT52588.1|1730320_1732720_-	hypothetical protein	NA	A0A2L0HL53	Mycobacterium_phage	82.9	1.3e-173
AWT52589.1|1732800_1733457_-	hypothetical protein	NA	Q854H8	Mycobacterium_phage	54.0	4.6e-28
AWT52590.1|1733623_1733881_-	hypothetical protein	NA	NA	NA	NA	NA
AWT52591.1|1734225_1734840_-	hypothetical protein	NA	NA	NA	NA	NA
AWT52592.1|1734842_1735256_-	hypothetical protein	NA	NA	NA	NA	NA
AWT52593.1|1735252_1735531_-	hypothetical protein	NA	NA	NA	NA	NA
AWT52594.1|1735715_1736189_+	hypothetical protein	NA	W8FPS0	Mycobacterium_phage	43.3	5.7e-20
>prophage 4
CP027541	Mycolicibacterium smegmatis MKD8 chromosome, complete genome	7119169	2258441	2276360	7119169	transposase	Mycobacterium_phage(33.33%)	18	NA	NA
AWT53100.1|2258441_2259650_-	Fic protein family protein	NA	D7RWK9	Brochothrix_phage	24.4	2.2e-07
AWT53101.1|2259684_2259960_+	putative phage protein	NA	A0A0A7S2B5	Mycobacterium_phage	89.6	9.8e-33
AWT53102.1|2259974_2260673_+	putative phage protein	NA	A0A0A7RXU2	Mycobacterium_phage	93.9	3.3e-125
AWT53103.1|2260683_2261124_-	hypothetical protein	NA	A0A160DCY1	Gordonia_phage	38.8	8.4e-18
AWT53104.1|2261120_2261717_-	hypothetical protein	NA	NA	NA	NA	NA
AWT53105.1|2261929_2262349_+	hypothetical protein	NA	A0A0A7RVJ2	Mycobacterium_phage	91.2	8.1e-71
AWT53106.1|2262363_2265960_+	putative phage protein	NA	Q854Y3	Mycobacterium_virus	92.2	0.0e+00
AWT53107.1|2266005_2267301_+	hypothetical protein	NA	Q854Y2	Mycobacterium_virus	96.8	3.4e-184
AWT53108.1|2267666_2267858_+	HNH endonuclease domain protein	NA	NA	NA	NA	NA
AWT53109.1|2268008_2269190_+	HNH endonuclease domain protein	NA	NA	NA	NA	NA
AWT53110.1|2269186_2270200_-|transposase	transposase	transposase	NA	NA	NA	NA
AWT53111.1|2270199_2270625_-|transposase	putative transposase	transposase	NA	NA	NA	NA
AWT53112.1|2271222_2271678_+	hypothetical protein	NA	NA	NA	NA	NA
AWT53113.1|2271883_2272558_-	putative transposition helper protein	NA	U5N3V8	Enterobacteria_phage	41.0	8.6e-38
AWT53114.1|2272870_2273932_+|transposase	transposase	transposase	NA	NA	NA	NA
AWT53115.1|2273971_2274814_-|transposase	IS1137, transposase orfB	transposase	Q8W6R2	Burkholderia_virus	53.1	6.2e-70
AWT53116.1|2274891_2275236_-|transposase	IS3 family protein element, transposase orfA	transposase	NA	NA	NA	NA
AWT53117.1|2275298_2276360_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 5
CP027541	Mycolicibacterium smegmatis MKD8 chromosome, complete genome	7119169	4214559	4243294	7119169	tRNA,transposase	Shigella_phage(33.33%)	26	NA	NA
AWT54960.1|4214559_4215765_-|transposase	transposase	transposase	NA	NA	NA	NA
AWT54961.1|4216080_4216233_+	N-carbamoyl-L-amino acid amidohydrolase	NA	NA	NA	NA	NA
AWT54962.1|4216242_4217103_-|transposase	transposase subunit	transposase	U5P429	Shigella_phage	36.4	3.1e-32
AWT54963.1|4217099_4218173_-|transposase	putative transposase	transposase	NA	NA	NA	NA
AWT54964.1|4218169_4219279_-|transposase	transposase A	transposase	NA	NA	NA	NA
AWT54965.1|4219238_4220414_-|transposase	transposase, Mutator family protein	transposase	A0A220NQR7	Corynebacterium_phage	53.2	3.6e-92
AWT54966.1|4220490_4221513_-	Monomeric sarcosine oxidase	NA	NA	NA	NA	NA
AWT54967.1|4223478_4224255_+	polyprenyl synthetase	NA	NA	NA	NA	NA
AWT54968.1|4224190_4224517_-	hypothetical protein	NA	NA	NA	NA	NA
AWT54969.1|4224523_4224724_-	hypothetical protein	NA	NA	NA	NA	NA
AWT54970.1|4225099_4225189_-	hypothetical protein	NA	NA	NA	NA	NA
AWT54971.1|4225314_4227018_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
AWT54972.1|4227046_4228177_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	NA	NA	NA	NA	NA
AWT54973.1|4228336_4229428_+	(+)-T-muurolol synthase	NA	NA	NA	NA	NA
AWT54974.1|4229458_4230421_+	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
AWT54975.1|4230893_4231280_+	hypothetical protein	NA	NA	NA	NA	NA
AWT54976.1|4231432_4234165_-	transcriptional regulatory protein	NA	NA	NA	NA	NA
AWT54977.1|4234584_4235376_+	short-chain dehydrogenase/reductase SDR	NA	Q06VL0	Trichoplusia_ni_ascovirus	25.5	1.0e-05
AWT54978.1|4235449_4236208_+	hypothetical protein	NA	NA	NA	NA	NA
AWT54979.1|4236594_4237260_+	transcriptional regulator, GntR family protein	NA	NA	NA	NA	NA
AWT54980.1|4237327_4238647_+	major facilitator superfamily protein	NA	NA	NA	NA	NA
AWT54981.1|4238706_4239396_+	haloacid dehalogenase, type II	NA	NA	NA	NA	NA
AWT54982.1|4239430_4240639_+	PLP-dependent aminotransferase	NA	NA	NA	NA	NA
AWT54983.1|4240659_4241088_+	translation initiation inhibitor	NA	NA	NA	NA	NA
AWT54984.1|4241087_4242371_+|tRNA	glutamyl-tRNA(Gln) amidotransferase subunit A	tRNA	NA	NA	NA	NA
AWT54985.1|4242865_4243294_+|transposase	putative transposase	transposase	NA	NA	NA	NA
