The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	23132	49082	6075120	transposase,integrase	Ralstonia_phage(50.0%)	24	22974:23018	47422:47466
22974:23018	attL	CTCCGAAGGCAGGGGTCGTGGGTTCGAATCCCGCCTGGTGCACCA	NA	NA	NA	NA
AXH58915.1|23132_24206_+|integrase	site-specific integrase	integrase	A0A1S6L1B6	Ralstonia_phage	40.6	3.9e-61
AXH53931.1|24276_24513_-	hypothetical protein	NA	NA	NA	NA	NA
AXH53932.1|24572_24773_-	hypothetical protein	NA	NA	NA	NA	NA
AXH53933.1|24799_26011_+	nucleoside 2-deoxyribosyltransferase	NA	NA	NA	NA	NA
AXH53934.1|26007_26613_+	7-cyano-7-deazaguanine synthase	NA	NA	NA	NA	NA
AXH53935.1|26527_27271_+	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA	NA
AXH53936.1|27205_28039_-	8-oxoguanine DNA glycosylase	NA	NA	NA	NA	NA
AXH53937.1|28038_28716_-	DNA adenine methylase	NA	A0A0M4S5U3	Salmonella_phage	42.9	9.8e-42
AXH53938.1|29036_29339_+	hypothetical protein	NA	NA	NA	NA	NA
AXH53939.1|29385_30174_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58916.1|31065_32043_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58917.1|32830_33103_+	hypothetical protein	NA	NA	NA	NA	NA
AXH53940.1|33189_33381_-	hypothetical protein	NA	NA	NA	NA	NA
AXH53941.1|34376_34751_+	hypothetical protein	NA	NA	NA	NA	NA
AXH53942.1|34885_35863_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH53943.1|36097_36382_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58918.1|36627_37605_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH53944.1|38024_40529_+	hypothetical protein	NA	NA	NA	NA	NA
AXH53945.1|40736_41399_-	hypothetical protein	NA	NA	NA	NA	NA
AXH53946.1|41991_42318_+	hypothetical protein	NA	NA	NA	NA	NA
AXH53947.1|42314_44438_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58919.1|44564_45542_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH53948.1|45735_46239_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58920.1|48104_49082_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
47422:47466	attR	CTCCGAAGGCAGGGGTCGTGGGTTCGAATCCCGCCTGGTGCACCA	NA	NA	NA	NA
>prophage 2
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	270449	328008	6075120	holin,protease,tRNA,transposase	Bacillus_virus(15.38%)	56	NA	NA
AXH58937.1|270449_271427_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH54135.1|272164_273178_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.7	2.3e-47
AXH54136.1|273459_274758_-	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA	NA
AXH54137.1|274843_275035_-	protein GbcA	NA	NA	NA	NA	NA
AXH54138.1|275067_276168_+	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA	NA
AXH54139.1|276448_276715_-	hypothetical protein	NA	NA	NA	NA	NA
AXH54140.1|276838_277069_-	DUF3077 domain-containing protein	NA	NA	NA	NA	NA
AXH54141.1|277448_278285_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
AXH54142.1|278566_279214_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
AXH54143.1|279361_282055_-	EAL domain-containing protein	NA	G3MA91	Bacillus_virus	31.3	7.4e-16
AXH54144.1|282305_283718_-	MFS transporter	NA	NA	NA	NA	NA
AXH54145.1|283727_285053_-	TldD/PmbA family protein	NA	NA	NA	NA	NA
AXH54146.1|285052_286495_-	TldD/PmbA family protein	NA	NA	NA	NA	NA
AXH58938.1|286621_287662_-	low specificity L-threonine aldolase	NA	NA	NA	NA	NA
AXH54147.1|287761_288508_+	conjugal transfer protein TraX	NA	NA	NA	NA	NA
AXH54148.1|288616_289813_-	class I SAM-dependent rRNA methyltransferase	NA	NA	NA	NA	NA
AXH54149.1|289894_290434_-	type 1 glutamine amidotransferase	NA	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	34.9	3.5e-18
AXH54150.1|290618_291485_+	HDOD domain-containing protein	NA	NA	NA	NA	NA
AXH54151.1|291530_292343_+	formamidopyrimidine-DNA glycosylase	NA	A0A127AWE5	Bacillus_phage	28.5	1.8e-18
AXH54152.1|292441_292780_+	multidrug transporter	NA	NA	NA	NA	NA
AXH54153.1|292788_293040_-	ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	61.4	1.2e-21
AXH54154.1|293138_293618_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	43.0	5.7e-28
AXH54155.1|293932_294595_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AXH54156.1|294649_295507_+	sulfurtransferase	NA	NA	NA	NA	NA
AXH58939.1|295523_296549_-	hydrolase	NA	NA	NA	NA	NA
AXH54157.1|297049_297640_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
AXH54158.1|297639_299133_-	insulinase family protein	NA	NA	NA	NA	NA
AXH54159.1|299129_300479_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	25.3	5.0e-21
AXH58940.1|300604_301582_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH54160.1|301948_303457_+	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
AXH54161.1|303453_304125_+	cell division ATP-binding protein FtsE	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.8	3.0e-14
AXH54162.1|304121_305156_+	cell division protein FtsX	NA	NA	NA	NA	NA
AXH54163.1|305273_306128_+	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	38.5	3.6e-41
AXH58941.1|306230_306941_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
AXH54164.1|307021_307402_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
AXH54165.1|307514_307715_+	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
AXH54166.1|307767_308562_+	thiazole synthase	NA	NA	NA	NA	NA
AXH54167.1|308572_309307_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
AXH54168.1|309359_310418_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
AXH54169.1|310608_311121_-	dihydrofolate reductase	NA	A0A142IIC1	Enterobacteria_phage	47.0	5.5e-29
AXH54170.1|311230_312610_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
AXH54171.1|312602_313991_+	DUF3482 domain-containing protein	NA	A0A0R6PFW5	Moraxella_phage	36.3	4.3e-52
AXH54172.1|314299_314893_+	transcriptional regulator	NA	NA	NA	NA	NA
AXH54173.1|314997_316470_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
AXH54174.1|316481_316583_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54175.1|316610_318317_+|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	29.0	3.2e-49
AXH54176.1|318508_319027_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
AXH54177.1|319023_320007_+	FecR family protein	NA	NA	NA	NA	NA
AXH54178.1|320128_321262_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
AXH54179.1|321258_321441_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54180.1|321510_322140_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
AXH54181.1|322375_322879_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
AXH54182.1|323072_323972_+	acyltransferase	NA	NA	NA	NA	NA
AXH54183.1|323951_324515_-	DUF2780 domain-containing protein	NA	NA	NA	NA	NA
AXH58942.1|324745_325726_+	RHS repeat-associated core domain-containing protein	NA	B6SD27	Bacteriophage	40.2	1.1e-28
AXH58943.1|327030_328008_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	404477	486598	6075120	plate,tail,tRNA,transposase,lysis	Pseudomonas_phage(45.95%)	84	NA	NA
AXH58949.1|404477_405455_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH54246.1|405494_406058_-	DNA cytosine methyltransferase	NA	R4TMW4	Halovirus	34.6	2.6e-11
AXH54247.1|406210_406519_-	hypothetical protein	NA	NA	NA	NA	NA
AXH54248.1|406636_408301_+	hypothetical protein	NA	A0A2P0VNJ1	Tetraselmis_virus	31.8	1.0e-07
AXH54249.1|408527_409784_-	hypothetical protein	NA	NA	NA	NA	NA
AXH54250.1|409825_410035_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54251.1|411047_413537_-	bifunctional diguanylate cyclase/phosphodiesterase	NA	A0A127AWB9	Bacillus_phage	33.7	2.0e-15
AXH54252.1|413802_415653_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	34.7	2.0e-36
AXH54253.1|415720_417676_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	38.0	3.1e-72
AXH54254.1|418184_418400_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AXH54255.1|418598_419624_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	55.8	4.7e-104
AXH54256.1|419659_420238_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
AXH54257.1|420303_420657_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AXH54258.1|420647_421172_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AXH54259.1|421272_422502_-|tRNA	multifunctional tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/2'phosphatase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	46.8	3.9e-81
AXH54260.1|422598_424161_-	SpoVR family protein	NA	NA	NA	NA	NA
AXH54261.1|424157_425429_-	YeaH/YhbH family protein	NA	A0A140HLI1	Bacillus_phage	41.2	9.9e-11
AXH58950.1|425550_427473_-	PrkA family serine protein kinase	NA	NA	NA	NA	NA
AXH54262.1|427757_428078_-	thiosulfate sulfurtransferase	NA	NA	NA	NA	NA
AXH54263.1|428074_428971_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	A0A291L9W7	Bordetella_phage	43.8	1.4e-06
AXH54264.1|428970_429351_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
AXH54265.1|429464_430271_-	ribosomal RNA small subunit methyltransferase A	NA	NA	NA	NA	NA
AXH54266.1|430267_431257_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
AXH58951.1|431253_432540_-	molecular chaperone SurA	NA	NA	NA	NA	NA
AXH54267.1|432556_435337_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
AXH54268.1|435466_436492_+	aminoglycoside phosphotransferase	NA	NA	NA	NA	NA
AXH54269.1|436556_437228_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
AXH54270.1|437228_437996_+	molecular chaperone DjlA	NA	NA	NA	NA	NA
AXH54271.1|438029_439016_-	DUF3530 family protein	NA	NA	NA	NA	NA
AXH54272.1|441185_441815_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AXH54273.1|441855_441969_-	DUF1534 domain-containing protein	NA	NA	NA	NA	NA
AXH54274.1|442130_443255_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	31.4	2.3e-27
AXH54275.1|443337_444372_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
AXH54276.1|444449_445697_+	ABC transporter permease	NA	NA	NA	NA	NA
AXH54277.1|445708_446530_+	ABC transporter permease	NA	NA	NA	NA	NA
AXH54278.1|446656_447331_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AXH54279.1|447327_448146_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AXH54280.1|448215_449697_+	anthranilate synthase component I	NA	NA	NA	NA	NA
AXH58952.1|450052_451975_-	autotransporter domain-containing esterase	NA	NA	NA	NA	NA
AXH54281.1|452080_452347_-	transcriptional regulator	NA	A0A2H4J8B4	uncultured_Caudovirales_phage	51.2	2.1e-16
AXH54282.1|452444_452693_-	DUF1654 domain-containing protein	NA	NA	NA	NA	NA
AXH54283.1|452847_453537_-	helix-turn-helix domain-containing protein	NA	Q8HAG7	Salmonella_phage	47.4	5.3e-51
AXH54284.1|453648_454092_+	hypothetical protein	NA	A0A2H4J8A5	uncultured_Caudovirales_phage	45.8	6.0e-24
AXH54285.1|454364_454559_+	Com family DNA-binding transcriptional regulator	NA	B5TK59	Pseudomonas_phage	92.1	2.7e-13
AXH54286.1|454561_455734_+	glycoside hydrolase	NA	NA	NA	NA	NA
AXH54287.1|455856_456246_+	chemotaxis protein	NA	A0A059VK40	Pseudomonas_phage	76.4	2.3e-43
AXH54288.1|456226_456565_+	hypothetical protein	NA	A0A059VJW1	Pseudomonas_phage	59.2	9.0e-20
AXH54289.1|456610_457201_+	hypothetical protein	NA	B5TK65	Pseudomonas_phage	52.6	6.3e-53
AXH54290.1|457197_457386_+	DUF2635 domain-containing protein	NA	B5TK66	Pseudomonas_phage	61.0	5.3e-14
AXH54291.1|457404_458901_+|tail	phage tail protein	tail	B5TK67	Pseudomonas_phage	80.7	2.9e-235
AXH54292.1|458961_459309_+|tail	phage tail protein	tail	B5TK68	Pseudomonas_phage	70.4	8.6e-42
AXH54293.1|459305_459602_+|tail	phage tail assembly protein	tail	B5TK69	Pseudomonas_phage	77.4	4.3e-34
AXH54294.1|459526_459733_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54295.1|459732_461877_+|tail	phage tail tape measure protein	tail	U5P420	Shigella_phage	39.3	2.1e-77
AXH54296.1|461873_463298_+	hydroxyacid dehydrogenase	NA	B5TK71	Pseudomonas_phage	43.9	8.3e-107
AXH54297.1|463301_464429_+|plate	baseplate protein	plate	B5TK72	Pseudomonas_phage	60.8	7.2e-114
AXH54298.1|464425_464938_+|plate	phage baseplate assembly protein V	plate	B5TK73	Pseudomonas_phage	75.6	5.6e-66
AXH54299.1|464934_465333_+	hypothetical protein	NA	B5TK74	Pseudomonas_phage	65.2	3.1e-43
AXH54300.1|465322_466363_+|plate	baseplate J/gp47 family protein	plate	B5TK75	Pseudomonas_phage	69.8	1.6e-131
AXH54301.1|466350_466950_+	DUF2313 domain-containing protein	NA	B5TK76	Pseudomonas_phage	72.4	7.5e-86
AXH58953.1|467098_468421_+|tail	phage tail protein	tail	B5TK79	Pseudomonas_phage	49.3	3.0e-71
AXH54302.1|468428_468995_+|tail	phage tail protein	tail	B5TK80	Pseudomonas_phage	46.9	2.7e-45
AXH54303.1|469300_470302_+|tail	phage tail protein	tail	NA	NA	NA	NA
AXH54304.1|470399_470945_+	glycoside hydrolase family 19 protein	NA	A0A2H4JHX4	uncultured_Caudovirales_phage	71.1	1.1e-67
AXH58954.1|470956_471451_+|lysis	lysis protein	lysis	B5TK84	Pseudomonas_phage	47.8	5.0e-27
AXH54305.1|471515_471701_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54306.1|471860_472460_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	64.7	2.5e-73
AXH54307.1|472481_473531_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	57.7	6.9e-111
AXH54308.1|473527_474364_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	56.2	2.3e-69
AXH54309.1|474393_475089_+	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
AXH54310.1|475100_475745_-	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA	NA
AXH54311.1|475954_476377_+	OsmC family protein	NA	NA	NA	NA	NA
AXH54312.1|476619_477414_+	adenosylmethionine decarboxylase	NA	NA	NA	NA	NA
AXH54313.1|477490_478138_-	demethoxyubiquinone hydroxylase family protein	NA	NA	NA	NA	NA
AXH54314.1|478260_478599_-	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
AXH54315.1|478702_479479_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
AXH54316.1|479542_480451_-	DUF805 domain-containing protein	NA	NA	NA	NA	NA
AXH54317.1|480559_480988_-	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA	NA
AXH54318.1|481121_482156_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
AXH54319.1|482255_482606_+	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	50.5	7.4e-25
AXH54320.1|482668_483763_-	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA	NA
AXH54321.1|483766_485185_-	peptidase M23	NA	A8ATH6	Listeria_phage	44.7	4.2e-18
AXH54322.1|485181_485283_-	hypothetical protein	NA	NA	NA	NA	NA
AXH54323.1|485386_486598_+|tRNA	tyrosine--tRNA ligase	tRNA	NA	NA	NA	NA
>prophage 4
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	1003697	1047731	6075120	transposase	uncultured_virus(25.0%)	43	NA	NA
AXH58980.1|1003697_1004675_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58981.1|1004910_1005888_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH54773.1|1006321_1006654_-	hypothetical protein	NA	NA	NA	NA	NA
AXH54774.1|1006682_1008233_-	AmpG family muropeptide MFS transporter	NA	NA	NA	NA	NA
AXH54775.1|1008287_1008644_-	MGMT family protein	NA	NA	NA	NA	NA
AXH54776.1|1008808_1009816_+	DUF481 domain-containing protein	NA	NA	NA	NA	NA
AXH54777.1|1009869_1010628_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AXH54778.1|1010906_1011401_+	membrane protein FxsA	NA	NA	NA	NA	NA
AXH54779.1|1011655_1011949_+	co-chaperone GroES	NA	A0A221S322	uncultured_virus	38.9	1.1e-13
AXH58982.1|1011998_1013642_+	molecular chaperone GroEL	NA	A0A2I7SAK5	Vibrio_phage	64.2	2.5e-176
AXH54780.1|1013722_1014463_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AXH54781.1|1014640_1015324_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	34.5	5.1e-30
AXH54782.1|1015313_1016603_+	sensor histidine kinase	NA	B5LWA6	Feldmannia_species_virus	29.4	6.7e-07
AXH54783.1|1016804_1017485_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXH54784.1|1017489_1018212_+	InaA protein	NA	NA	NA	NA	NA
AXH54785.1|1018208_1018436_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54786.1|1018460_1019567_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
AXH54787.1|1019583_1020648_-	imelysin	NA	NA	NA	NA	NA
AXH54788.1|1020726_1022154_-	thiol oxidoreductase	NA	NA	NA	NA	NA
AXH54789.1|1022360_1022990_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
AXH54790.1|1023115_1024474_-	peptidase	NA	NA	NA	NA	NA
AXH54791.1|1024643_1026695_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AXH54792.1|1027083_1027665_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
AXH54793.1|1027857_1028460_-	amino acid transporter	NA	NA	NA	NA	NA
AXH54794.1|1028554_1029454_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA	NA
AXH54795.1|1029528_1030521_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
AXH54796.1|1030605_1031457_+	ATPase	NA	NA	NA	NA	NA
AXH54797.1|1031623_1032367_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54798.1|1033510_1034677_-	MFS transporter	NA	NA	NA	NA	NA
AXH54799.1|1034705_1035020_-	transcriptional regulator	NA	NA	NA	NA	NA
AXH54800.1|1035184_1035784_+	ACP phosphodiesterase	NA	NA	NA	NA	NA
AXH54801.1|1035741_1036578_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AXH54802.1|1036577_1037333_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXH54803.1|1037646_1038753_+	serine hydrolase	NA	NA	NA	NA	NA
AXH54804.1|1038749_1039088_+	amidase	NA	NA	NA	NA	NA
AXH54805.1|1039169_1039751_+	YceI family protein	NA	NA	NA	NA	NA
AXH54806.1|1039752_1040910_+	phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein	NA	NA	NA	NA	NA
AXH54807.1|1040951_1041185_-	DUF3077 domain-containing protein	NA	NA	NA	NA	NA
AXH54808.1|1041753_1042071_-	hypothetical protein	NA	NA	NA	NA	NA
AXH58983.1|1042317_1043295_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58984.1|1044359_1045337_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH54809.1|1045543_1046647_+|transposase	IS5-like element ISPsy19 family transposase	transposase	NA	NA	NA	NA
AXH58985.1|1046753_1047731_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	1104911	1187472	6075120	terminase,head,portal,protease,holin,tRNA,transposase,capsid,tail	Pseudomonas_phage(48.89%)	94	NA	NA
AXH58989.1|1104911_1105889_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH54853.1|1106403_1107624_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXH54854.1|1107774_1108923_+	L-threonine dehydrogenase	NA	NA	NA	NA	NA
AXH54855.1|1108947_1109394_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXH54856.1|1109517_1110774_+	pectate lyase	NA	NA	NA	NA	NA
AXH54857.1|1110914_1111496_-	hypothetical protein	NA	NA	NA	NA	NA
AXH54858.1|1111607_1112048_-	DedA family protein	NA	NA	NA	NA	NA
AXH54859.1|1112057_1112936_-	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA	NA
AXH54860.1|1112944_1113238_-	metal resistance protein	NA	NA	NA	NA	NA
AXH54861.1|1113889_1114123_-	hypothetical protein	NA	A0A2H4J5U9	uncultured_Caudovirales_phage	73.1	1.5e-18
AXH54862.1|1114224_1114467_-	hypothetical protein	NA	NA	NA	NA	NA
AXH58990.1|1114456_1114957_-	HNH endonuclease	NA	NA	NA	NA	NA
AXH54863.1|1115012_1115213_-	hypothetical protein	NA	NA	NA	NA	NA
AXH54864.1|1115209_1115590_-	hypothetical protein	NA	NA	NA	NA	NA
AXH54865.1|1115579_1115774_-	carbon storage regulator	NA	A0A0U1UNS3	Pseudomonas_phage	55.1	5.0e-07
AXH54866.1|1115851_1116232_-	DNA-binding response regulator	NA	A0A1W6JTA9	Pseudomonas_phage	47.2	4.2e-18
AXH54867.1|1116318_1117071_-	helix-turn-helix domain-containing protein	NA	A0A1W6JTC8	Pseudomonas_phage	63.4	4.4e-51
AXH54868.1|1117179_1117467_+	Cro/Cl family transcriptional regulator	NA	NA	NA	NA	NA
AXH54869.1|1117603_1117939_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54870.1|1117935_1118307_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54871.1|1118303_1118549_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54872.1|1118545_1119268_+	hypothetical protein	NA	A0A1W6JTB2	Pseudomonas_phage	44.3	1.6e-37
AXH54873.1|1119264_1119855_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54874.1|1119851_1120679_+	helix-turn-helix domain-containing protein	NA	A0A1W6JTD5	Pseudomonas_phage	58.8	1.2e-46
AXH54875.1|1120675_1121464_+	AAA family ATPase	NA	A0A0A0YRV1	Pseudomonas_phage	49.6	4.3e-65
AXH54876.1|1121460_1122849_+	replicative DNA helicase	NA	A0A2H4J8N1	uncultured_Caudovirales_phage	58.6	1.3e-144
AXH54877.1|1123323_1123608_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54878.1|1123604_1123979_+	antitermination protein Q	NA	A0A1W6JTD2	Pseudomonas_phage	56.7	8.4e-35
AXH54879.1|1124452_1125373_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54880.1|1125409_1125733_+|holin	phage holin, lambda family	holin	A0A2D1GNJ3	Pseudomonas_phage	38.0	8.6e-12
AXH54881.1|1125729_1126149_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58991.1|1126276_1126504_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54882.1|1126788_1127127_+	HNH endonuclease	NA	C4ML58	Xanthomonas_virus	50.0	6.6e-23
AXH54883.1|1127265_1127772_+|terminase	terminase small subunit	terminase	Q3HQS6	Burkholderia_phage	46.3	3.5e-20
AXH54884.1|1127771_1129457_+|terminase	terminase large subunit	terminase	A0A2H4JDK9	uncultured_Caudovirales_phage	83.6	6.3e-255
AXH54885.1|1129459_1130674_+|portal	phage portal protein	portal	A0A2H4JFN7	uncultured_Caudovirales_phage	74.0	7.4e-173
AXH54886.1|1130660_1131302_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JA51	uncultured_Caudovirales_phage	76.1	6.2e-86
AXH54887.1|1131298_1132504_+|capsid	phage major capsid protein	capsid	A0A2H4J8D1	uncultured_Caudovirales_phage	61.7	2.2e-132
AXH54888.1|1132563_1132902_+	hypothetical protein	NA	A0A2H4JG33	uncultured_Caudovirales_phage	50.8	4.6e-08
AXH54889.1|1132901_1133201_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4J8C5	uncultured_Caudovirales_phage	75.8	2.1e-36
AXH54890.1|1133200_1133521_+|head,tail	head-tail adaptor protein	head,tail	A0A2D1GNG1	Pseudomonas_phage	64.6	2.6e-29
AXH54891.1|1133698_1134199_+	HK97 gp10 family phage protein	NA	A0A2D1GNN2	Pseudomonas_phage	70.9	5.3e-61
AXH54892.1|1134191_1134578_+	DUF3168 domain-containing protein	NA	A0A2D1GNT4	Pseudomonas_phage	84.4	2.0e-55
AXH54893.1|1134632_1135130_+	hypothetical protein	NA	A0A2D1GNF2	Pseudomonas_phage	79.4	1.5e-71
AXH54894.1|1135141_1135477_+	hypothetical protein	NA	A0A2D1GNT5	Pseudomonas_phage	59.4	1.2e-27
AXH54895.1|1135509_1135719_+	hypothetical protein	NA	A0A2D1GNK2	Pseudomonas_phage	63.3	9.8e-09
AXH54896.1|1139237_1139576_+|tail	phage tail protein	tail	I6PBN7	Cronobacter_phage	39.7	1.8e-15
AXH54897.1|1139572_1140322_+|tail	phage minor tail protein L	tail	A0A2H4J4Q5	uncultured_Caudovirales_phage	79.1	2.2e-119
AXH54898.1|1140324_1141089_+|tail	phage tail protein	tail	A0A2H4J1J7	uncultured_Caudovirales_phage	81.2	3.5e-128
AXH54899.1|1141150_1141498_+	hypothetical protein	NA	A0A1B0VMC6	Pseudomonas_phage	66.7	2.9e-29
AXH58992.1|1141552_1142140_+|tail	tail assembly protein	tail	A0A2H4J1H0	uncultured_Caudovirales_phage	70.5	1.1e-70
AXH54900.1|1142197_1145899_+	DUF1983 domain-containing protein	NA	A0A2H4J8Z6	uncultured_Caudovirales_phage	62.7	0.0e+00
AXH54901.1|1145895_1146264_+	hypothetical protein	NA	A0A059VJS9	Pseudomonas_phage	96.7	1.8e-61
AXH54902.1|1146260_1146923_+	hypothetical protein	NA	A0A059VF40	Pseudomonas_phage	94.1	3.3e-119
AXH54903.1|1146952_1148491_+|tail	tail fiber domain-containing protein	tail	A0A059VJZ6	Pseudomonas_phage	61.0	5.3e-43
AXH54904.1|1148550_1149084_+	glycoside hydrolase family 19 protein	NA	A0A059VA40	Pseudomonas_phage	92.7	9.0e-91
AXH54905.1|1149080_1149596_+	DUF2514 domain-containing protein	NA	A0A059VF51	Pseudomonas_phage	80.1	5.2e-59
AXH54906.1|1149608_1149821_+	hypothetical protein	NA	A0A059VK06	Pseudomonas_phage	55.7	1.3e-11
AXH54907.1|1149817_1151062_+	SGNH/GDSL hydrolase family protein	NA	A0A059VA35	Pseudomonas_phage	92.5	2.0e-218
AXH54908.1|1151076_1151421_-	hypothetical protein	NA	NA	NA	NA	NA
AXH54909.1|1153113_1154928_-	allophanate hydrolase	NA	NA	NA	NA	NA
AXH54910.1|1154963_1158656_-	urea carboxylase	NA	NA	NA	NA	NA
AXH54911.1|1158765_1159383_-	urea carboxylase-associated family protein	NA	NA	NA	NA	NA
AXH54912.1|1159394_1160120_-	urea carboxylase-associated family protein	NA	NA	NA	NA	NA
AXH54913.1|1160116_1160899_-	ABC transporter ATP-binding protein	NA	A0A140XAK6	Dickeya_phage	50.5	3.0e-18
AXH54914.1|1160895_1161711_-	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	24.1	4.3e-07
AXH54915.1|1161738_1162806_-	lipid kinase	NA	NA	NA	NA	NA
AXH54916.1|1162824_1163220_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54917.1|1163368_1163860_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54918.1|1164052_1164745_+	uracil-DNA glycosylase	NA	S4VYQ4	Pandoravirus	46.5	6.1e-55
AXH54919.1|1164766_1165801_-	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
AXH54920.1|1165793_1167308_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
AXH54921.1|1167309_1167768_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
AXH54922.1|1167830_1168811_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AXH54923.1|1168809_1169040_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58993.1|1169291_1169963_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AXH54924.1|1169955_1171338_+	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	25.9	5.0e-16
AXH54925.1|1171340_1172162_-	HDOD domain-containing protein	NA	A0A1C3NFB0	Phage_NCTB	31.4	3.9e-24
AXH54926.1|1172276_1173224_-	folate-binding protein	NA	NA	NA	NA	NA
AXH54927.1|1173371_1173626_+	succinate dehydrogenase assembly factor 2 family protein	NA	NA	NA	NA	NA
AXH54928.1|1173609_1174074_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54929.1|1174042_1175659_-	L-aspartate oxidase	NA	NA	NA	NA	NA
AXH54930.1|1176156_1176738_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
AXH54931.1|1176771_1177362_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AXH54932.1|1177370_1178330_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AXH54933.1|1178613_1180053_+|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	31.2	7.7e-28
AXH54934.1|1180224_1182021_+	elongation factor 4	NA	A0A2K9L2P9	Tupanvirus	40.0	5.7e-20
AXH54935.1|1182030_1182885_+	signal peptidase I	NA	NA	NA	NA	NA
AXH54936.1|1183001_1183379_+	DUF4845 domain-containing protein	NA	NA	NA	NA	NA
AXH54937.1|1183375_1184065_+	ribonuclease 3	NA	A0A1C9C5A7	Heterosigma_akashiwo_virus	38.3	2.1e-23
AXH54938.1|1184057_1184960_+	GTPase Era	NA	NA	NA	NA	NA
AXH54939.1|1185019_1185703_+	DNA repair protein RecO	NA	NA	NA	NA	NA
AXH58994.1|1185762_1186503_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
AXH54940.1|1186512_1187472_-|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	tRNA	NA	NA	NA	NA
>prophage 6
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	1216869	1258580	6075120	tRNA,transposase	Planktothrix_phage(50.0%)	41	NA	NA
AXH54963.1|1216869_1217973_-|transposase	IS5-like element ISPsy19 family transposase	transposase	NA	NA	NA	NA
AXH59001.1|1218179_1219157_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH54964.1|1219432_1220146_-	hypothetical protein	NA	NA	NA	NA	NA
AXH59002.1|1220427_1221405_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH54965.1|1221563_1222496_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54966.1|1222561_1223692_-	OpgC domain-containing protein	NA	NA	NA	NA	NA
AXH54967.1|1223986_1224268_+	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
AXH54968.1|1224420_1225512_+	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
AXH54969.1|1225508_1225919_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
AXH54970.1|1225957_1226875_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXH59003.1|1226918_1227716_+	5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase	NA	NA	NA	NA	NA
AXH59004.1|1227839_1228832_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXH54971.1|1228913_1229561_+	DsbA family oxidoreductase	NA	NA	NA	NA	NA
AXH54972.1|1229692_1231021_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AXH54973.1|1231036_1232962_-	sensor histidine kinase	NA	NA	NA	NA	NA
AXH54974.1|1233017_1233752_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.2	3.4e-32
AXH54975.1|1233748_1234414_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
AXH54976.1|1234413_1235160_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXH59005.1|1235290_1236205_-	glutamate/aspartate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXH54977.1|1236553_1238092_-	glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AXH59006.1|1238274_1238529_+	DUF1534 domain-containing protein	NA	NA	NA	NA	NA
AXH54978.1|1238532_1239288_-	DeoR/GlpR family transcriptional regulator	NA	A0A077SK06	Escherichia_phage	30.7	1.0e-23
AXH54979.1|1239387_1240893_-	glycerol kinase	NA	NA	NA	NA	NA
AXH54980.1|1240953_1241811_-	aquaporin	NA	NA	NA	NA	NA
AXH54981.1|1242151_1242622_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
AXH54982.1|1242630_1243704_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.9	1.0e-24
AXH54983.1|1243700_1244621_-	ornithine carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	27.5	7.1e-19
AXH54984.1|1245071_1245365_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54985.1|1245497_1247606_+	molybdopterin oxidoreductase family protein	NA	NA	NA	NA	NA
AXH54986.1|1247694_1248021_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
AXH54987.1|1248149_1248620_-	bacterioferritin	NA	NA	NA	NA	NA
AXH54988.1|1248820_1249039_-	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
AXH54989.1|1249237_1249915_-	ribonuclease T	NA	NA	NA	NA	NA
AXH54990.1|1249911_1250955_-	dihydroorotase	NA	NA	NA	NA	NA
AXH54991.1|1251104_1252010_+	OmpA family protein	NA	NA	NA	NA	NA
AXH54992.1|1252130_1253348_+	argininosuccinate synthase	NA	NA	NA	NA	NA
AXH59007.1|1253782_1254193_-	hypothetical protein	NA	NA	NA	NA	NA
AXH59008.1|1254583_1255561_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH54993.1|1255738_1256320_+	hypothetical protein	NA	NA	NA	NA	NA
AXH54994.1|1256334_1257438_+|transposase	IS5-like element ISPsy19 family transposase	transposase	NA	NA	NA	NA
AXH59009.1|1257602_1258580_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 7
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	1573710	1616981	6075120	transposase	Antheraea_pernyi_nuclear_polyhedrosis_virus(12.5%)	38	NA	NA
AXH59033.1|1573710_1574688_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH59034.1|1574923_1575901_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH55239.1|1576133_1576319_+	hypothetical protein	NA	NA	NA	NA	NA
AXH55240.1|1576845_1577595_-	3-oxoacyl-ACP reductase FabG	NA	NA	NA	NA	NA
AXH55241.1|1577709_1578276_+	cysteine hydrolase	NA	NA	NA	NA	NA
AXH55242.1|1578288_1581033_-	helicase	NA	A8C6A2	Antheraea_pernyi_nuclear_polyhedrosis_virus	29.4	6.2e-42
AXH55243.1|1581108_1581633_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55244.1|1581644_1585097_-	transcription-repair coupling factor	NA	NA	NA	NA	NA
AXH55245.1|1585287_1586751_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AXH55246.1|1586898_1588161_+	MFS transporter	NA	NA	NA	NA	NA
AXH55247.1|1588245_1589538_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	38.7	3.3e-70
AXH55248.1|1589916_1590948_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
AXH55249.1|1591114_1592509_+	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA	NA
AXH55250.1|1592551_1593274_-	glycerophosphodiester phosphodiesterase	NA	A0A292GJA3	Xanthomonas_phage	38.6	2.1e-05
AXH55251.1|1593346_1593934_-	PilZ domain-containing protein	NA	NA	NA	NA	NA
AXH55252.1|1594036_1595287_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
AXH55253.1|1595279_1595978_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	41.6	2.3e-38
AXH55254.1|1596055_1597300_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
AXH55255.1|1597429_1598260_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.2	2.4e-37
AXH55256.1|1598515_1598785_-	DUF4404 family protein	NA	NA	NA	NA	NA
AXH55257.1|1598888_1599497_-	HAD family phosphatase	NA	NA	NA	NA	NA
AXH55258.1|1599695_1600397_+	VacJ family lipoprotein	NA	NA	NA	NA	NA
AXH55259.1|1600485_1600785_-	PilZ domain-containing protein	NA	NA	NA	NA	NA
AXH55260.1|1601052_1602237_+	response regulator	NA	NA	NA	NA	NA
AXH55261.1|1602233_1602719_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
AXH55262.1|1602804_1603731_-	transaldolase	NA	A0A1D7SEQ4	Cyanophage	34.4	6.5e-12
AXH55263.1|1603939_1606309_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AXH55264.1|1606549_1607794_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
AXH55265.1|1607928_1608372_+	RulA protein	NA	A0A1L5C2A3	Pseudoalteromonas_phage	33.7	2.9e-10
AXH55266.1|1608450_1608690_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59035.1|1608818_1609952_+	sensor histidine kinase	NA	A0A1B0VMK3	Pseudomonas_phage	60.3	6.5e-123
AXH55267.1|1609929_1610286_-	hypothetical protein	NA	NA	NA	NA	NA
AXH59036.1|1611163_1612141_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH55268.1|1612423_1612963_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59037.1|1613030_1614008_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH55269.1|1614221_1614566_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59038.1|1614794_1615772_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH55270.1|1615877_1616981_-|transposase	IS5-like element ISPsy19 family transposase	transposase	NA	NA	NA	NA
>prophage 8
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	1870167	1926710	6075120	terminase,head,integrase,portal,protease,transposase,capsid,tail	Pseudomonas_phage(41.3%)	76	1866046:1866061	1903396:1903411
1866046:1866061	attL	TCGGTACTGTGACGCC	NA	NA	NA	NA
AXH55437.1|1870167_1872558_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	32.5	4.1e-18
AXH55438.1|1872610_1874077_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
AXH55439.1|1874407_1874752_+	DUF469 domain-containing protein	NA	NA	NA	NA	NA
AXH55440.1|1874834_1875401_-	response regulator	NA	NA	NA	NA	NA
AXH55441.1|1875494_1876598_-|integrase	integrase	integrase	A0A0U4JIT5	Pseudomonas_phage	61.3	7.0e-130
AXH55442.1|1876578_1876821_-	excisionase	NA	A0A2H4J5E1	uncultured_Caudovirales_phage	45.6	3.0e-09
AXH55443.1|1876857_1877592_-	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	77.5	4.8e-119
AXH59048.1|1877639_1878374_-	site-specific DNA-methyltransferase	NA	Q6UJ22	Burkholderia_virus	56.2	7.1e-70
AXH55444.1|1878478_1879096_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55445.1|1879281_1879710_-	hypothetical protein	NA	V9VCU4	Achromobacter_phage	40.5	1.2e-05
AXH55446.1|1879880_1880369_-	HNH endonuclease	NA	A0A1J0GWA4	Alteromonas_phage	44.8	8.7e-32
AXH59049.1|1880414_1881482_-	reverse transcriptase	NA	A0A0N7AE80	Bacillus_phage	34.5	4.7e-46
AXH55447.1|1881788_1882145_-	four helix bundle protein	NA	NA	NA	NA	NA
AXH55448.1|1882196_1882814_-	DUF1566 domain-containing protein	NA	NA	NA	NA	NA
AXH55449.1|1882890_1883502_-	DUF1566 domain-containing protein	NA	NA	NA	NA	NA
AXH55450.1|1883607_1883832_+	hypothetical protein	NA	NA	NA	NA	NA
AXH55451.1|1883839_1884151_-	hypothetical protein	NA	A0A2H4JAQ1	uncultured_Caudovirales_phage	55.3	1.8e-22
AXH55452.1|1884232_1884592_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55453.1|1884588_1886220_-	Heme peroxidase	NA	A0A2H4J6P1	uncultured_Caudovirales_phage	63.3	1.2e-183
AXH55454.1|1886216_1886972_-	hypothetical protein	NA	A0A2H4IZU8	uncultured_Caudovirales_phage	88.8	1.3e-122
AXH55455.1|1887495_1888086_-	hypothetical protein	NA	A0A127KN62	Pseudomonas_phage	30.4	8.9e-15
AXH55456.1|1888082_1888277_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55457.1|1888273_1888675_-	hypothetical protein	NA	A0A2H4J9E7	uncultured_Caudovirales_phage	37.8	8.2e-12
AXH55458.1|1888695_1888938_-	DUF551 domain-containing protein	NA	NA	NA	NA	NA
AXH55459.1|1889639_1889819_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55460.1|1889875_1890100_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55461.1|1890145_1890619_-	hypothetical protein	NA	A0A173GC65	Salmonella_phage	41.1	3.7e-27
AXH55462.1|1891125_1891389_+	DUF1652 domain-containing protein	NA	NA	NA	NA	NA
AXH55463.1|1891644_1892718_-	ImmA/IrrE family metallo-endopeptidase	NA	B6SBZ6	Clostridium_virus	27.1	3.3e-23
AXH55464.1|1892704_1893370_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55465.1|1893551_1893767_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55466.1|1893763_1894075_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55467.1|1894110_1894383_-	hypothetical protein	NA	NA	NA	NA	NA
AXH59050.1|1894395_1894788_-	peptidase S24	NA	K7PH71	Enterobacterial_phage	53.4	3.7e-33
AXH55468.1|1895186_1895411_+	hypothetical protein	NA	NA	NA	NA	NA
AXH55469.1|1895439_1895640_+	hypothetical protein	NA	A0A2H4J115	uncultured_Caudovirales_phage	57.8	3.1e-12
AXH55470.1|1895660_1895864_+	hypothetical protein	NA	NA	NA	NA	NA
AXH55471.1|1895945_1896176_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55472.1|1896314_1897112_+	DNA-binding protein	NA	A0A2D1GNK4	Pseudomonas_phage	45.0	1.1e-39
AXH55473.1|1897108_1897429_+	hypothetical protein	NA	A0A2H4J5Q4	uncultured_Caudovirales_phage	44.8	3.2e-11
AXH55474.1|1897425_1898223_+	DUF1376 domain-containing protein	NA	A0A059VF77	Pseudomonas_phage	93.3	4.1e-63
AXH55475.1|1898212_1899031_+	AAA family ATPase	NA	A0A059VK34	Pseudomonas_phage	98.2	1.0e-146
AXH55476.1|1900000_1900417_+	NinB family protein	NA	A0A2H4JA22	uncultured_Caudovirales_phage	84.1	3.9e-65
AXH55477.1|1900416_1900749_+	hypothetical protein	NA	NA	NA	NA	NA
AXH55478.1|1900748_1901330_+	recombination protein NinG	NA	A0A059VA66	Pseudomonas_phage	74.0	1.6e-80
AXH55479.1|1901326_1901872_+	hypothetical protein	NA	A0A0H5AWB8	Pseudomonas_phage	62.5	1.2e-58
AXH55480.1|1902127_1902499_+	chemotaxis protein	NA	A0A059VK40	Pseudomonas_phage	77.2	4.4e-44
AXH55481.1|1902498_1902858_+	hypothetical protein	NA	A0A059VJW1	Pseudomonas_phage	72.8	2.1e-27
AXH59051.1|1902890_1903103_+	hypothetical protein	NA	A0A2H4J0Y9	uncultured_Caudovirales_phage	60.9	1.6e-14
AXH55482.1|1903163_1903343_+	hypothetical protein	NA	NA	NA	NA	NA
AXH55483.1|1903333_1903729_+	HNH endonuclease	NA	A0A2D1GNP5	Pseudomonas_phage	75.2	2.8e-57
1903396:1903411	attR	TCGGTACTGTGACGCC	NA	NA	NA	NA
AXH55484.1|1903896_1904382_+|terminase	phage terminase small subunit P27 family	terminase	A0A2D1GNP3	Pseudomonas_phage	90.7	1.2e-78
AXH55485.1|1904382_1906116_+|terminase	terminase large subunit	terminase	A0A2D1GNU5	Pseudomonas_phage	92.8	0.0e+00
AXH55486.1|1906124_1906436_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55487.1|1906434_1907580_+|portal	phage portal protein	portal	A0A1V0E8B9	Vibrio_phage	57.8	7.1e-125
AXH55488.1|1907583_1908426_+|protease	Clp protease ClpP	protease	A0A1V0E8B8	Vibrio_phage	62.4	3.5e-89
AXH55489.1|1908437_1909823_+|capsid	phage major capsid protein	capsid	H2BDB0	Pseudomonas_virus	63.6	2.7e-131
AXH55490.1|1909873_1910290_+	hypothetical protein	NA	NA	NA	NA	NA
AXH55491.1|1910293_1910770_+|head,tail	phage gp6-like head-tail connector protein	head,tail	G3ENA1	Psychrobacter_phage	35.7	1.2e-14
AXH55492.1|1910769_1911108_+|head,tail	head-tail adaptor protein	head,tail	A0A1J0GUY4	Halomonas_phage	59.1	2.4e-28
AXH55493.1|1911100_1911586_+	hypothetical protein	NA	A0A0U3TGT7	Pseudomonas_phage	67.3	2.3e-56
AXH55494.1|1911585_1911954_+	DUF3168 domain-containing protein	NA	A0A1J0GUW9	Halomonas_phage	66.9	2.6e-41
AXH55495.1|1912018_1912516_+|tail	phage tail protein	tail	H2BDC0	Pseudomonas_virus	66.5	4.7e-57
AXH55496.1|1912525_1912963_+|tail	phage tail protein	tail	K7PJU9	Enterobacteria_phage	65.9	7.2e-38
AXH55497.1|1913225_1914032_+	hypothetical protein	NA	A0A2H4J8D6	uncultured_Caudovirales_phage	47.5	4.7e-59
AXH55498.1|1914088_1916662_+|tail	phage tail tape measure protein	tail	A0A2H4PI09	Pseudomonas_phage	50.6	6.6e-179
AXH55499.1|1916661_1917006_+|tail	phage tail protein	tail	A0A2D1GNJ1	Pseudomonas_phage	52.6	6.7e-31
AXH55500.1|1917140_1917371_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55501.1|1917452_1917707_-	protein L	NA	NA	NA	NA	NA
AXH59052.1|1917864_1918563_+|tail	phage minor tail protein L	tail	A0A2D1GNF3	Pseudomonas_phage	81.8	4.3e-109
AXH55502.1|1918565_1919348_+|tail	phage tail protein	tail	A0A2D1GNP8	Pseudomonas_phage	72.7	1.1e-118
AXH55503.1|1919344_1919932_+|tail	tail assembly protein	tail	A0A2D1GNM2	Pseudomonas_phage	74.6	1.5e-75
AXH55504.1|1919986_1923715_+	DUF1983 domain-containing protein	NA	A0A2D1GNE3	Pseudomonas_phage	59.5	0.0e+00
AXH55505.1|1923716_1924019_+	hypothetical protein	NA	NA	NA	NA	NA
AXH55506.1|1924018_1924885_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59053.1|1925732_1926710_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	1983526	1990023	6075120	integrase	Geobacillus_virus(16.67%)	9	1982053:1982067	1998680:1998694
1982053:1982067	attL	TGCCGACCACCAGCG	NA	NA	NA	NA
AXH55566.1|1983526_1983829_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	38.9	1.8e-11
AXH55567.1|1983809_1984166_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AXH55568.1|1984413_1985598_-|integrase	site-specific integrase	integrase	A0A059VF45	Pseudomonas_phage	96.2	3.8e-222
AXH59056.1|1985921_1986656_-	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	76.6	6.3e-119
AXH55569.1|1986704_1986893_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55570.1|1986889_1987282_-	ASCH domain-containing protein	NA	A0A291AUQ6	Sinorhizobium_phage	46.9	1.6e-28
AXH55571.1|1987708_1988251_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55572.1|1988421_1988910_-	HNH endonuclease	NA	A0A1J0GWA4	Alteromonas_phage	44.8	8.7e-32
AXH59057.1|1988955_1990023_-	reverse transcriptase	NA	A0A0N7AE80	Bacillus_phage	34.5	4.7e-46
1998680:1998694	attR	TGCCGACCACCAGCG	NA	NA	NA	NA
>prophage 10
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	2024153	2094109	6075120	protease,transposase	Bacillus_phage(33.33%)	42	NA	NA
AXH55604.1|2024153_2026160_-|protease	collagenase-like protease	protease	Q6DW11	Phage_TP	29.0	7.2e-24
AXH55605.1|2026266_2027058_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.0	3.9e-13
AXH55606.1|2027054_2028077_-	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	22.8	8.0e-11
AXH55607.1|2028073_2029087_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXH55608.1|2029435_2030152_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AXH55609.1|2030260_2030995_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AXH55610.1|2031099_2031822_-	porin	NA	NA	NA	NA	NA
AXH55611.1|2031957_2032722_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.6	5.0e-26
AXH59058.1|2032732_2033572_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	26.0	9.1e-13
AXH55612.1|2033620_2034526_-	ABC transporter permease	NA	NA	NA	NA	NA
AXH55613.1|2034525_2035563_-	ABC transporter permease	NA	NA	NA	NA	NA
AXH55614.1|2035603_2037226_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXH55615.1|2037312_2038479_-	enolase	NA	NA	NA	NA	NA
AXH55616.1|2038985_2039681_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
AXH55617.1|2039677_2040550_+	PAP2 family protein	NA	NA	NA	NA	NA
AXH55618.1|2040570_2041245_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	31.8	1.7e-25
AXH55619.1|2041252_2042290_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AXH55620.1|2042299_2043214_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AXH55621.1|2043737_2046254_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AXH55622.1|2046291_2048220_+	3-phytase	NA	NA	NA	NA	NA
AXH55623.1|2048275_2048986_+	protein TolQ	NA	NA	NA	NA	NA
AXH55624.1|2048995_2049442_+	protein TolR	NA	NA	NA	NA	NA
AXH55625.1|2049438_2050281_+	energy transducer TonB	NA	NA	NA	NA	NA
AXH55626.1|2050322_2052320_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	35.0	1.5e-37
AXH55627.1|2052807_2053221_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AXH55628.1|2053638_2055057_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AXH55629.1|2055439_2056927_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	77.6	1.4e-213
AXH55630.1|2058141_2058831_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	34.8	1.6e-26
AXH55631.1|2058929_2060402_+	RND transporter	NA	NA	NA	NA	NA
AXH55632.1|2060421_2061273_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
AXH55633.1|2061289_2062423_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXH55634.1|2062440_2065473_+	AcrB/AcrD/AcrF family protein	NA	NA	NA	NA	NA
AXH55635.1|2065546_2066788_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
AXH55636.1|2067487_2069197_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA	NA
AXH55637.1|2081272_2082376_+|transposase	IS5-like element ISPsy19 family transposase	transposase	NA	NA	NA	NA
AXH59059.1|2082540_2083518_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH55638.1|2083585_2083873_-	hypothetical protein	NA	NA	NA	NA	NA
AXH59060.1|2084310_2085288_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH59061.1|2085802_2086780_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH55639.1|2087396_2088053_-	hypothetical protein	NA	NA	NA	NA	NA
AXH55640.1|2088021_2093058_-	hypothetical protein	NA	NA	NA	NA	NA
AXH59062.1|2093131_2094109_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 11
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	2718796	2729265	6075120	tRNA	uncultured_Caudovirales_phage(75.0%)	12	NA	NA
AXH56160.1|2718796_2720077_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.8	5.3e-97
AXH56161.1|2720077_2721472_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
AXH56162.1|2721523_2722522_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
AXH56163.1|2722630_2723632_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	83.2	2.0e-163
AXH56164.1|2723628_2723964_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	76.6	9.8e-43
AXH56165.1|2723960_2724260_-	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	62.6	2.9e-30
AXH56166.1|2724259_2724622_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	62.8	2.1e-35
AXH59110.1|2724623_2725016_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	82.3	8.2e-57
AXH56167.1|2725250_2726552_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	36.1	1.6e-61
AXH56168.1|2726566_2727346_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXH56169.1|2727331_2728240_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXH56170.1|2728593_2729265_+	BAX inhibitor (BI)-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	92.8	8.7e-107
>prophage 12
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	2853993	2906789	6075120	terminase,tail,head,integrase	Pseudomonas_phage(66.67%)	73	2853809:2853868	2907566:2907631
2853809:2853868	attL	CGGATTGCAAATCCGCCTACGCCGGTTCGATTCCGACCTCGGCCTCCACTATTCAAAGCC	NA	NA	NA	NA
AXH56261.1|2853993_2854971_+|integrase	site-specific integrase	integrase	W6MYA3	Pseudomonas_phage	65.8	4.0e-113
AXH56262.1|2854967_2855213_-	hypothetical protein	NA	B5WZU8	Pseudomonas_phage	70.1	5.1e-25
AXH56263.1|2855290_2856025_-	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	77.0	2.8e-119
AXH59122.1|2856072_2856807_-	site-specific DNA-methyltransferase	NA	Q6UJ22	Burkholderia_virus	56.2	7.1e-70
AXH56264.1|2856911_2857529_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56265.1|2857714_2858143_-	hypothetical protein	NA	V9VCU4	Achromobacter_phage	40.5	1.2e-05
AXH56266.1|2858139_2858403_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56267.1|2858305_2859844_-	DNA cytosine methyltransferase	NA	Q6V7R9	Burkholderia_virus	46.5	1.1e-109
AXH56268.1|2859846_2860335_-	HNH endonuclease	NA	A0A1J0GWA4	Alteromonas_phage	44.7	2.5e-31
AXH56269.1|2860681_2861029_-	hypothetical protein	NA	A0A059VA62	Pseudomonas_phage	100.0	1.2e-59
AXH59123.1|2861116_2861305_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56270.1|2861806_2862304_-	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	70.1	1.6e-44
AXH56271.1|2862312_2862930_-	exonuclease	NA	A0A1B0VMB3	Pseudomonas_phage	78.6	9.8e-89
AXH59124.1|2862926_2863676_-	single-stranded DNA-binding protein	NA	A0A125RNR3	Pseudomonas_phage	64.2	3.5e-80
AXH56272.1|2863701_2864859_-	hypothetical protein	NA	A0A059VK18	Pseudomonas_phage	84.4	3.8e-86
AXH56273.1|2864915_2865107_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56274.1|2865093_2865282_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56275.1|2865278_2865473_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56276.1|2865469_2865871_-	hypothetical protein	NA	A0A2H4J9E7	uncultured_Caudovirales_phage	36.4	4.1e-11
AXH56277.1|2865891_2866125_-	hypothetical protein	NA	A0A2H4JA69	uncultured_Caudovirales_phage	48.6	1.1e-11
AXH56278.1|2866124_2866328_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56279.1|2866586_2866766_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56280.1|2866822_2867047_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56281.1|2867092_2867566_-	hypothetical protein	NA	A0A173GC65	Salmonella_phage	41.1	3.7e-27
AXH56282.1|2868072_2868336_+	DUF1652 domain-containing protein	NA	NA	NA	NA	NA
AXH56283.1|2868591_2869665_-	ImmA/IrrE family metallo-endopeptidase	NA	B6SBZ6	Clostridium_virus	27.1	3.3e-23
AXH56284.1|2869651_2870317_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56285.1|2870498_2870714_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56286.1|2870710_2871022_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56287.1|2871057_2871330_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56288.1|2871342_2872002_-	helix-turn-helix domain-containing protein	NA	K7P850	Enterobacteria_phage	41.6	5.4e-37
AXH56289.1|2872091_2872301_+	hypothetical protein	NA	A0A1B0Z2M2	Pseudomonas_phage	61.9	1.6e-14
AXH56290.1|2872332_2872539_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56291.1|2872558_2872783_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56292.1|2872860_2873595_+	phage antirepressor protein	NA	A0A059VF66	Pseudomonas_phage	70.2	8.9e-89
AXH56293.1|2874621_2875440_+	AAA family ATPase	NA	A0A059VK34	Pseudomonas_phage	98.5	4.7e-147
AXH56294.1|2876409_2876826_+	NinB family protein	NA	A0A2H4JA22	uncultured_Caudovirales_phage	84.1	3.9e-65
AXH56295.1|2876825_2877158_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56296.1|2877157_2877739_+	recombination protein NinG	NA	A0A059VA66	Pseudomonas_phage	74.0	1.6e-80
AXH56297.1|2877735_2878281_+	hypothetical protein	NA	A0A0H5AWB8	Pseudomonas_phage	62.5	1.2e-58
AXH56298.1|2878536_2878908_+	chemotaxis protein	NA	A0A059VK40	Pseudomonas_phage	77.2	4.4e-44
AXH56299.1|2878907_2879246_+	hypothetical protein	NA	A0A059VJW1	Pseudomonas_phage	74.7	9.0e-28
AXH56300.1|2879291_2879510_+	hypothetical protein	NA	A0A2H4J0Y9	uncultured_Caudovirales_phage	55.7	1.5e-15
AXH56301.1|2879803_2880427_+	hypothetical protein	NA	A0A059VJU8	Pseudomonas_phage	94.7	2.8e-112
AXH56302.1|2880459_2880921_+	DUF2280 domain-containing protein	NA	A0A1B0VMH2	Pseudomonas_phage	77.7	1.1e-49
AXH56303.1|2880907_2882209_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	58.3	1.5e-147
AXH56304.1|2882217_2883657_+	DUF4055 domain-containing protein	NA	A0A2H4J5M6	uncultured_Caudovirales_phage	37.4	4.2e-74
AXH56305.1|2883646_2884696_+|head	phage head morphogenesis protein	head	D2XJ68	Escherichia_phage	32.0	2.0e-41
AXH56306.1|2884811_2885522_+	hypothetical protein	NA	A0A2H4J0Y0	uncultured_Caudovirales_phage	56.3	2.1e-34
AXH56307.1|2885534_2886503_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	66.4	1.2e-114
AXH56308.1|2886554_2887130_+	hypothetical protein	NA	A0A1B0VMF7	Pseudomonas_phage	38.5	2.6e-11
AXH56309.1|2887181_2887571_+	protein singed	NA	A0A0S2SYB7	Pseudomonas_phage	43.4	1.0e-14
AXH56310.1|2887574_2887934_+	hypothetical protein	NA	A0A0S2SYG4	Pseudomonas_phage	45.8	2.1e-19
AXH56311.1|2887933_2888314_+	HK97 gp10 family phage protein	NA	A0A059VF88	Pseudomonas_phage	56.2	3.6e-33
AXH56312.1|2888310_2888733_+	hypothetical protein	NA	A0A059VK45	Pseudomonas_phage	86.4	1.7e-63
AXH56313.1|2888729_2889599_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56314.1|2889665_2890826_+	hypothetical protein	NA	A0A059VG08	Pseudomonas_phage	97.0	3.2e-165
AXH56315.1|2890905_2891379_+	hypothetical protein	NA	A0A059VF34	Pseudomonas_phage	89.2	1.2e-73
AXH56316.1|2891396_2891648_+	hypothetical protein	NA	A0A059VJS3	Pseudomonas_phage	78.3	2.2e-31
AXH56317.1|2891751_2891982_+	hypothetical protein	NA	A0A059VJS3	Pseudomonas_phage	81.4	3.0e-11
AXH56318.1|2892056_2892743_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56319.1|2892809_2896844_+|tail	phage tail tape measure protein	tail	A0A059VJZ1	Pseudomonas_phage	79.4	0.0e+00
AXH56320.1|2896861_2897446_+	hypothetical protein	NA	A0A059VJR9	Pseudomonas_phage	95.9	3.3e-102
AXH56321.1|2897445_2898048_+	hypothetical protein	NA	A0A059VA31	Pseudomonas_phage	99.5	2.8e-112
AXH56322.1|2898050_2898449_+	hypothetical protein	NA	A0A059VK01	Pseudomonas_phage	93.9	2.7e-71
AXH56323.1|2898448_2901625_+	DUF1983 domain-containing protein	NA	A0A059VFW9	Pseudomonas_phage	81.1	0.0e+00
AXH56324.1|2901621_2901990_+	hypothetical protein	NA	A0A059VJS9	Pseudomonas_phage	96.7	1.8e-61
AXH56325.1|2901986_2902649_+	hypothetical protein	NA	A0A059VF40	Pseudomonas_phage	94.1	3.3e-119
AXH56326.1|2902678_2904217_+|tail	tail fiber domain-containing protein	tail	A0A059VJZ6	Pseudomonas_phage	61.0	5.3e-43
AXH56327.1|2904277_2904811_+	glycoside hydrolase family 19 protein	NA	A0A059VA40	Pseudomonas_phage	93.2	5.8e-90
AXH56328.1|2904807_2905323_+	DUF2514 domain-containing protein	NA	A0A059VF51	Pseudomonas_phage	80.1	5.2e-59
AXH56329.1|2905335_2905548_+	hypothetical protein	NA	A0A059VK06	Pseudomonas_phage	55.7	1.3e-11
AXH56330.1|2905544_2906789_+	SGNH/GDSL hydrolase family protein	NA	A0A059VA35	Pseudomonas_phage	87.4	2.5e-208
2907566:2907631	attR	CGGATTGCAAATCCGCCTACGCCGGTTCGATTCCGACCTCGGCCTCCACTATTCAAAGCCCCGCAG	NA	NA	NA	NA
>prophage 13
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	3483115	3536166	6075120	transposase	uncultured_Caudovirales_phage(42.86%)	46	NA	NA
AXH59168.1|3483115_3484093_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH56793.1|3484199_3485303_-|transposase	IS5-like element ISPsy19 family transposase	transposase	NA	NA	NA	NA
AXH59169.1|3485509_3486487_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH56794.1|3487217_3487589_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56795.1|3487590_3487773_+	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
AXH56796.1|3487879_3489133_+	MFS transporter	NA	NA	NA	NA	NA
AXH56797.1|3489139_3489880_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
AXH56798.1|3490042_3491344_+	Mn2+/Fe2+ transporter	NA	NA	NA	NA	NA
AXH56799.1|3491569_3493681_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AXH56800.1|3493719_3494448_+	DUF4198 domain-containing protein	NA	NA	NA	NA	NA
AXH56801.1|3494720_3495587_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AXH56802.1|3495583_3496486_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	34.5	3.0e-30
AXH56803.1|3496467_3497709_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AXH56804.1|3497722_3498028_+	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
AXH56805.1|3498024_3500931_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AXH56806.1|3500934_3501507_+	sarcosine oxidase	NA	NA	NA	NA	NA
AXH56807.1|3501721_3503662_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.5	8.5e-22
AXH56808.1|3503782_3504679_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXH56809.1|3504788_3505664_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AXH56810.1|3505758_3506157_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59170.1|3506244_3506370_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56811.1|3506435_3507917_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
AXH59171.1|3507913_3510046_-	PAS domain S-box protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	38.5	1.6e-13
AXH56812.1|3511195_3512542_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
AXH56813.1|3512538_3513498_+	dihydrofolate reductase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	26.5	6.7e-12
AXH56814.1|3513574_3514549_+	aliphatic sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXH59172.1|3514609_3516145_-	amidase	NA	NA	NA	NA	NA
AXH56815.1|3516368_3517001_-	ANTAR domain-containing protein	NA	NA	NA	NA	NA
AXH56816.1|3516997_3518146_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXH56817.1|3518888_3520070_+	urea ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXH56818.1|3520136_3521039_+	urea ABC transporter permease subunit UrtB	NA	NA	NA	NA	NA
AXH56819.1|3521040_3522183_+	urea ABC transporter permease subunit UrtC	NA	NA	NA	NA	NA
AXH56820.1|3522179_3522917_+	urea ABC transporter ATP-binding protein UrtD	NA	A0A2H4PQG7	Staphylococcus_phage	28.4	5.7e-19
AXH56821.1|3522919_3523609_+	urea ABC transporter ATP-binding subunit UrtE	NA	G9BWD6	Planktothrix_phage	29.8	1.2e-18
AXH56822.1|3523631_3524072_+	urease accessory protein UreE	NA	NA	NA	NA	NA
AXH59173.1|3524068_3524800_+	urease accessory protein UreF	NA	NA	NA	NA	NA
AXH56823.1|3524827_3525523_+	urease subunit beta	NA	NA	NA	NA	NA
AXH56824.1|3525526_3527239_+	urease subunit alpha	NA	NA	NA	NA	NA
AXH56825.1|3527265_3527928_+	urease accessory protein UreG	NA	NA	NA	NA	NA
AXH56826.1|3527924_3528782_+	urease accessory protein UreD	NA	NA	NA	NA	NA
AXH56827.1|3528850_3529942_-	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA	NA
AXH56828.1|3530001_3530337_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AXH56829.1|3530478_3532101_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	29.8	5.1e-20
AXH59174.1|3532320_3533298_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH56830.1|3533903_3534881_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH59175.1|3535188_3536166_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 14
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	3541186	3600510	6075120	protease,integrase,transposase	Streptococcus_phage(50.0%)	60	3540096:3540110	3604134:3604148
3540096:3540110	attL	GCTGGCGGGTGGCGT	NA	NA	NA	NA
AXH59176.1|3541186_3542164_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH56831.1|3542328_3543432_-|transposase	IS5-like element ISPsy19 family transposase	transposase	NA	NA	NA	NA
AXH59177.1|3543580_3544558_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH59178.1|3544995_3545973_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH56832.1|3546126_3548148_+	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	30.0	1.0e-38
AXH56833.1|3549220_3549754_+	regulator	NA	NA	NA	NA	NA
AXH56834.1|3549961_3550330_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56835.1|3550949_3551366_+	DUF3577 domain-containing protein	NA	NA	NA	NA	NA
AXH59179.1|3551492_3552470_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH56836.1|3552721_3552943_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56837.1|3553044_3553407_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56838.1|3553507_3554119_+	DUF3275 family protein	NA	NA	NA	NA	NA
AXH56839.1|3554244_3554844_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56840.1|3554874_3556326_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXH56841.1|3556433_3558692_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
AXH56842.1|3558786_3559149_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59180.1|3559986_3560964_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH56843.1|3561762_3562467_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56844.1|3562475_3563222_+	TIGR03759 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH56845.1|3563760_3564267_+	integrating conjugative element protein	NA	NA	NA	NA	NA
AXH56846.1|3564278_3566438_+	conjugative coupling factor TraD, PFGI-1 class	NA	NA	NA	NA	NA
AXH56847.1|3566477_3567227_+	TIGR03747 family integrating conjugative element membrane protein	NA	NA	NA	NA	NA
AXH56848.1|3567236_3568694_+	ATP-dependent helicase	NA	A0A088C4M0	Shewanella_sp._phage	30.7	3.3e-42
AXH56849.1|3568716_3569148_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56850.1|3569317_3569650_+	DUF4177 domain-containing protein	NA	NA	NA	NA	NA
AXH56851.1|3569729_3570095_+	conjugal transfer protein	NA	NA	NA	NA	NA
AXH56852.1|3570091_3570331_+	TIGR03758 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH56853.1|3570350_3570719_+	TIGR03745 family integrating conjugative element membrane protein	NA	NA	NA	NA	NA
AXH56854.1|3570734_3571127_+	TIGR03750 family conjugal transfer protein	NA	NA	NA	NA	NA
AXH56855.1|3571123_3571792_+	TIGR03746 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH56856.1|3571788_3572712_+	TIGR03749 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH56857.1|3572701_3574198_+	TIGR03752 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH56858.1|3574175_3574631_+	TIGR03751 family conjugal transfer lipoprotein	NA	NA	NA	NA	NA
AXH59181.1|3574840_3577588_+	conjugative transfer ATPase	NA	NA	NA	NA	NA
AXH56859.1|3577584_3577884_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56860.1|3577880_3578579_+	protein-disulfide isomerase	NA	NA	NA	NA	NA
AXH56861.1|3578889_3579435_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56862.1|3580486_3580624_+	stability/partitioning determinant	NA	NA	NA	NA	NA
AXH56863.1|3580656_3580875_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59182.1|3580768_3581425_-|protease	YopT-type cysteine protease domain-containing protein	protease	NA	NA	NA	NA
AXH56864.1|3581787_3582684_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56865.1|3583367_3584471_-|transposase	IS5-like element ISPsy19 family transposase	transposase	NA	NA	NA	NA
AXH56866.1|3584515_3584704_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56867.1|3584902_3585457_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56868.1|3585497_3586037_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56869.1|3586054_3586243_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56870.1|3586239_3586542_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56871.1|3586606_3587017_+	TIGR03757 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH56872.1|3587013_3587952_+	TIGR03756 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH56873.1|3587972_3589340_+	integrating conjugative element protein	NA	NA	NA	NA	NA
AXH56874.1|3589342_3589717_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56875.1|3589713_3591252_+	conjugal transfer protein TraG	NA	NA	NA	NA	NA
AXH59183.1|3591291_3591678_-	DUF3742 family protein	NA	NA	NA	NA	NA
AXH56876.1|3592272_3593466_-	MFS transporter	NA	NA	NA	NA	NA
AXH56877.1|3593486_3594089_-	DUF1349 domain-containing protein	NA	NA	NA	NA	NA
AXH56878.1|3594090_3594744_-	HAD family phosphatase	NA	NA	NA	NA	NA
AXH56879.1|3594743_3595418_-	riboflavin biosynthesis protein RibD	NA	NA	NA	NA	NA
AXH59184.1|3595479_3596439_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
AXH56880.1|3597130_3599059_+	integrating conjugative element relaxase	NA	NA	NA	NA	NA
AXH56881.1|3599055_3600510_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
3604134:3604148	attR	GCTGGCGGGTGGCGT	NA	NA	NA	NA
>prophage 15
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	3611432	3717563	6075120	terminase,head,integrase,portal,protease,tail,tRNA,transposase,capsid,lysis	Pseudomonas_phage(45.83%)	106	3622132:3622148	3718136:3718152
AXH56894.1|3611432_3613208_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SIS0	Klosneuvirus	27.0	3.3e-12
AXH59186.1|3613488_3613833_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56895.1|3614182_3614656_-	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	40.0	3.9e-21
AXH59187.1|3615075_3615351_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56896.1|3615501_3615723_+	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	47.6	3.8e-11
AXH56897.1|3615788_3615995_-	protein SlyX	NA	NA	NA	NA	NA
AXH56898.1|3615991_3616423_-	HIT domain-containing protein	NA	NA	NA	NA	NA
AXH56899.1|3616904_3617090_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56900.1|3617286_3618633_+	outer membrane porin, OprD family	NA	NA	NA	NA	NA
AXH56901.1|3618804_3620520_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L0T2	Tupanvirus	23.9	9.9e-06
AXH56902.1|3620590_3621547_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56903.1|3621586_3622648_-	DNA polymerase IV	NA	NA	NA	NA	NA
3622132:3622148	attL	CCTCGACCTGATCCGGA	NA	NA	NA	NA
AXH56904.1|3623640_3626283_+	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA	NA
AXH56905.1|3626282_3627617_+	virulence factor family protein	NA	NA	NA	NA	NA
AXH56906.1|3627714_3629610_-	potassium transporter Kup	NA	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	33.3	5.2e-72
AXH59188.1|3631119_3631419_-	hypothetical protein	NA	NA	NA	NA	NA
AXH59189.1|3631657_3631837_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56907.1|3631820_3632216_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56908.1|3632266_3633061_-	DNA adenine methylase	NA	Q5ZQW7	Pseudomonas_phage	66.3	6.7e-98
AXH56909.1|3633654_3634089_+	peptidase S24	NA	A0A1W6JNS2	Morganella_phage	36.9	2.3e-15
AXH56910.1|3634072_3634321_+	DNA-directed DNA polymerase	NA	A0A218MNF2	uncultured_virus	68.4	2.6e-24
AXH56911.1|3634381_3635392_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
AXH56912.1|3635415_3637557_+|integrase	integrase	integrase	NA	NA	NA	NA
AXH56913.1|3637722_3638811_-	type III secretion system YopJ family effector HopZ2	NA	NA	NA	NA	NA
AXH59190.1|3638895_3640011_+	DUF4113 domain-containing protein	NA	I6RSM4	Salmonella_phage	45.8	9.7e-79
AXH59191.1|3640908_3641886_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH56914.1|3642092_3643196_+|transposase	IS5-like element ISPsy19 family transposase	transposase	NA	NA	NA	NA
AXH59192.1|3643365_3644190_+	2OG-Fe(II) oxygenase	NA	NA	NA	NA	NA
AXH56915.1|3644204_3645176_-	hypothetical protein	NA	A0A0U4IBV2	Pseudomonas_phage	66.8	9.2e-126
AXH56916.1|3645148_3645859_-	hypothetical protein	NA	A0A2I7RNK1	Vibrio_phage	38.3	2.6e-37
AXH56917.1|3645855_3646386_-	DNA-binding protein	NA	A0A0U4J942	Pseudomonas_phage	57.3	3.2e-48
AXH56918.1|3646382_3647315_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56919.1|3647304_3647775_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56920.1|3647771_3649769_-|tail	phage tail protein	tail	A0A0U4K5K2	Pseudomonas_phage	56.4	1.0e-107
AXH56921.1|3649777_3650302_-|tail	phage tail protein	tail	A0A0U4JVX3	Pseudomonas_phage	73.0	3.2e-72
AXH56922.1|3650298_3651468_-	hypothetical protein	NA	A0A0U4JJ14	Pseudomonas_phage	69.4	6.7e-155
AXH56923.1|3651464_3651782_-	DUF2590 family protein	NA	A0A0U4B0N5	Pseudomonas_phage	78.4	4.4e-37
AXH56924.1|3651781_3653947_-|tail	phage tail tape measure protein	tail	A0A0U4IJ81	Pseudomonas_phage	39.3	1.2e-125
AXH56925.1|3654116_3654407_-	hypothetical protein	NA	A0A0U4B0P2	Pseudomonas_phage	63.6	4.1e-21
AXH56926.1|3654440_3654920_-|lysis	lysis protein	lysis	A0A0U4JXC2	Pseudomonas_phage	45.6	1.5e-20
AXH56927.1|3654916_3655444_-	lysozyme	NA	NA	NA	NA	NA
AXH56928.1|3655440_3655647_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56929.1|3655646_3655856_-	TraR/DksA family transcriptional regulator	NA	NA	NA	NA	NA
AXH56930.1|3655855_3656308_-	DUF2597 family protein	NA	A0A0U3TH58	Pseudomonas_phage	72.8	7.2e-57
AXH56931.1|3656311_3657424_-	DUF2586 family protein	NA	A0A0U4KLE6	Pseudomonas_phage	66.6	1.0e-136
AXH56932.1|3657438_3658107_-	virion morphogenesis protein	NA	A0A0U4ISN1	Pseudomonas_phage	55.2	1.7e-54
AXH56933.1|3658096_3658540_-|tail	phage tail protein	tail	A0A0U4IBS7	Pseudomonas_phage	63.7	1.6e-48
AXH56934.1|3658536_3658998_-|head	head protein	head	A0A0U4J933	Pseudomonas_phage	60.8	5.5e-44
AXH56935.1|3659101_3659824_-|terminase	terminase	terminase	A0A0U4JEJ1	Pseudomonas_phage	70.7	5.5e-83
AXH56936.1|3659820_3660843_-|capsid	phage major capsid protein, P2 family	capsid	A0A0U4K5I9	Pseudomonas_phage	66.5	4.5e-123
AXH59193.1|3660844_3661768_-|capsid	capsid scaffolding protein	capsid	A0A0U4JVV6	Pseudomonas_phage	55.9	3.4e-61
AXH56937.1|3661929_3663984_+|terminase	terminase	terminase	A0A0U4JIZ9	Pseudomonas_phage	71.9	1.9e-266
AXH59194.1|3663910_3664765_+|portal	phage portal protein	portal	A0A0U4B0L9	Pseudomonas_phage	76.9	3.1e-101
AXH56938.1|3664842_3665112_+	transcriptional regulator	NA	U3PB63	Vibrio_phage	41.8	1.9e-09
AXH56939.1|3665766_3666471_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56940.1|3666662_3667286_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56941.1|3667282_3667507_-	Cro/Cl family transcriptional regulator	NA	A0A2H4J1L8	uncultured_Caudovirales_phage	45.2	3.1e-08
AXH56942.1|3667654_3668374_+	helix-turn-helix domain-containing protein	NA	A0A1W6JTC8	Pseudomonas_phage	56.4	5.0e-44
AXH56943.1|3668440_3668758_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56944.1|3668823_3669096_-	hypothetical protein	NA	A8YQQ5	Burkholderia_virus	46.2	1.5e-09
AXH59195.1|3669095_3669314_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56945.1|3670411_3670987_-	hypothetical protein	NA	NA	NA	NA	NA
AXH56946.1|3671104_3671362_-	DUF1654 domain-containing protein	NA	NA	NA	NA	NA
AXH56947.1|3671425_3673045_-	recombinase family protein	NA	Q3HQV4	Burkholderia_phage	57.4	1.2e-162
AXH59196.1|3673079_3674411_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
AXH59197.1|3674513_3674954_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXH56948.1|3675046_3675757_+	RNA-binding protein	NA	NA	NA	NA	NA
AXH56949.1|3675837_3676299_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	49.3	4.2e-36
AXH59198.1|3676312_3677005_+|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
AXH56950.1|3677084_3677864_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
AXH56951.1|3677987_3678914_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXH56952.1|3678921_3679287_-	diacylglycerol kinase	NA	NA	NA	NA	NA
AXH56953.1|3679370_3680018_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AXH56954.1|3680263_3680974_-	DTW domain-containing protein	NA	NA	NA	NA	NA
AXH56955.1|3681253_3681670_+	hypothetical protein	NA	NA	NA	NA	NA
AXH56956.1|3681863_3682985_+	LOG family protein	NA	NA	NA	NA	NA
AXH56957.1|3682989_3683457_-	regulatory protein RecX	NA	NA	NA	NA	NA
AXH56958.1|3683462_3684527_-	DNA recombination/repair protein RecA	NA	A0A0S2MVG1	Bacillus_phage	62.4	1.4e-111
AXH59199.1|3684620_3685121_-	CinA family protein	NA	B5TK85	Pseudomonas_phage	71.1	3.0e-56
AXH56959.1|3685594_3688174_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	24.0	8.1e-28
AXH56960.1|3688433_3688757_+	ferredoxin family protein	NA	NA	NA	NA	NA
AXH56961.1|3689273_3690281_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	8.6e-34
AXH56962.1|3690384_3691251_-	LysM peptidoglycan-binding domain-containing protein	NA	I3PV79	Clostridium_phage	35.3	5.5e-13
AXH56963.1|3691459_3692137_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	53.7	8.0e-44
AXH56964.1|3692136_3692886_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	49.8	1.6e-64
AXH56965.1|3692873_3693932_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
AXH56966.1|3693928_3694402_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
AXH56967.1|3694454_3695300_-	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
AXH56968.1|3695375_3696488_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	28.5	4.0e-32
AXH56969.1|3696592_3697489_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXH56970.1|3697489_3698200_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
AXH56971.1|3698213_3698492_-	cell division protein FtsB	NA	NA	NA	NA	NA
AXH56972.1|3698682_3699969_-	enolase	NA	A0A1X9I5Z8	Streptococcus_phage	60.0	1.6e-138
AXH56973.1|3700108_3700954_-	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.0	1.2e-49
AXH56974.1|3700968_3702600_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.3	8.2e-159
AXH56975.1|3702863_3704201_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
AXH56976.1|3704353_3705301_-	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA	NA
AXH56977.1|3705429_3708951_-	DNA polymerase III subunit alpha	NA	A0A1C9LWZ5	Streptomyces_phage	37.4	1.4e-195
AXH56978.1|3709020_3709674_-	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	40.5	3.0e-27
AXH56979.1|3709685_3710828_-	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
AXH56980.1|3710830_3711607_-	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
AXH56981.1|3711603_3712044_-	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
AXH56982.1|3712153_3713209_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
AXH56983.1|3713211_3713715_-	OmpH family outer membrane protein	NA	NA	NA	NA	NA
AXH56984.1|3713760_3716136_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
AXH56985.1|3716210_3717563_-|protease	sigma E protease regulator RseP	protease	NA	NA	NA	NA
3718136:3718152	attR	CCTCGACCTGATCCGGA	NA	NA	NA	NA
>prophage 16
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	3850920	3856909	6075120	tRNA	uncultured_Mediterranean_phage(33.33%)	8	NA	NA
AXH57099.1|3850920_3851256_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	44.6	2.2e-10
AXH57100.1|3851309_3852425_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	49.3	5.7e-95
AXH57101.1|3852439_3853504_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AXH57102.1|3853887_3854163_+	DUF4102 domain-containing protein	NA	A0A2H4JAT5	uncultured_Caudovirales_phage	65.6	1.1e-28
AXH57103.1|3854516_3855026_-	lysozyme	NA	Q6V7L5	Burkholderia_virus	59.8	1.2e-52
AXH57104.1|3855389_3855875_-	hypothetical protein	NA	NA	NA	NA	NA
AXH57105.1|3855952_3856195_-	hypothetical protein	NA	A0A2H4JEE3	uncultured_Caudovirales_phage	62.0	1.4e-22
AXH57106.1|3856534_3856909_+	hypothetical protein	NA	H2BD46	Pseudomonas_phage	51.4	1.4e-21
>prophage 17
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	4120982	4177138	6075120	protease,tRNA,transposase	Cyanophage(50.0%)	48	NA	NA
AXH57337.1|4120982_4121594_-|tRNA	tRNA-(ms[2]io[6]A)-hydroxylase	tRNA	NA	NA	NA	NA
AXH57338.1|4121690_4122161_-	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
AXH57339.1|4122563_4125164_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA	NA
AXH57340.1|4125442_4126015_+	manganese efflux pump MntP	NA	NA	NA	NA	NA
AXH57341.1|4126314_4127478_+	hypothetical protein	NA	NA	NA	NA	NA
AXH57342.1|4127458_4127869_+	hypothetical protein	NA	NA	NA	NA	NA
AXH57343.1|4127944_4128280_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59229.1|4128414_4129392_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH57344.1|4129484_4129679_-	hypothetical protein	NA	NA	NA	NA	NA
AXH57345.1|4129722_4134582_-	NAD-glutamate dehydrogenase	NA	NA	NA	NA	NA
AXH57346.1|4134950_4135310_+	hypothetical protein	NA	NA	NA	NA	NA
AXH57347.1|4135356_4136103_+	2-pyrone-4,6-dicarboxylate hydrolase	NA	NA	NA	NA	NA
AXH57348.1|4136313_4137273_+	MoxR family ATPase	NA	NA	NA	NA	NA
AXH57349.1|4137277_4138222_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AXH57350.1|4138218_4138713_+	DUF4381 domain-containing protein	NA	NA	NA	NA	NA
AXH57351.1|4138705_4139764_+	VWA domain-containing protein	NA	NA	NA	NA	NA
AXH57352.1|4139760_4141479_+	VWA domain-containing protein	NA	NA	NA	NA	NA
AXH57353.1|4141475_4143134_+	protein BatD	NA	NA	NA	NA	NA
AXH57354.1|4143176_4144421_+	exonuclease subunit SbcD	NA	NA	NA	NA	NA
AXH57355.1|4144417_4148062_+	chromosome segregation protein SMC	NA	A0A127KLF3	Cyanophage	28.9	1.1e-06
AXH57356.1|4148009_4148129_-	DUF1534 domain-containing protein	NA	NA	NA	NA	NA
AXH57357.1|4148349_4148544_-	hypothetical protein	NA	NA	NA	NA	NA
AXH57358.1|4148719_4149892_-	lactonase family protein	NA	NA	NA	NA	NA
AXH57359.1|4149972_4150266_-	hypothetical protein	NA	NA	NA	NA	NA
AXH57360.1|4150384_4151377_-	FAH family protein	NA	NA	NA	NA	NA
AXH57361.1|4151412_4152726_-	MFS transporter	NA	NA	NA	NA	NA
AXH57362.1|4152940_4154683_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AXH57363.1|4154776_4155490_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AXH57364.1|4155820_4156405_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
AXH59230.1|4157148_4158126_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH57365.1|4158291_4159395_-|transposase	IS5-like element ISPsy19 family transposase	transposase	NA	NA	NA	NA
AXH59231.1|4159543_4160521_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH57366.1|4160941_4161382_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59232.1|4161428_4161533_-	DUF1534 domain-containing protein	NA	NA	NA	NA	NA
AXH57367.1|4161569_4163960_-	RND family transporter	NA	NA	NA	NA	NA
AXH57368.1|4163987_4165037_-	hypothetical protein	NA	NA	NA	NA	NA
AXH57369.1|4165269_4166625_-	DUF1329 domain-containing protein	NA	NA	NA	NA	NA
AXH57370.1|4167130_4168288_-	glutathionylspermidine synthase family protein	NA	A0A219Y9C1	Aeromonas_phage	38.8	3.2e-64
AXH57371.1|4168299_4169046_-	DUF1190 domain-containing protein	NA	NA	NA	NA	NA
AXH57372.1|4169073_4169499_-	DUF350 domain-containing protein	NA	NA	NA	NA	NA
AXH57373.1|4169512_4170178_-	DUF2491 family protein	NA	NA	NA	NA	NA
AXH57374.1|4170258_4170813_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
AXH57375.1|4170843_4171551_-	PspA/IM30 family protein	NA	NA	NA	NA	NA
AXH57376.1|4171577_4172231_-	DUF2170 family protein	NA	NA	NA	NA	NA
AXH57377.1|4172467_4175134_-	aminopeptidase N	NA	NA	NA	NA	NA
AXH57378.1|4175146_4175947_-	DUF2797 domain-containing protein	NA	NA	NA	NA	NA
AXH57379.1|4175976_4176237_-	DUF1315 family protein	NA	NA	NA	NA	NA
AXH57380.1|4176265_4177138_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
>prophage 18
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	4903493	5027637	6075120	transposase	uncultured_virus(27.27%)	115	NA	NA
AXH59296.1|4903493_4904471_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH57966.1|4904616_4904865_-	hypothetical protein	NA	NA	NA	NA	NA
AXH57967.1|4905322_4906336_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AXH57968.1|4906594_4907539_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXH57969.1|4907550_4908327_+	sugar ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.2	4.0e-15
AXH57970.1|4908341_4909361_+	ABC transporter permease	NA	NA	NA	NA	NA
AXH57971.1|4909357_4910473_+	phosphotriesterase-related protein	NA	NA	NA	NA	NA
AXH57972.1|4910469_4911225_+	hypothetical protein	NA	NA	NA	NA	NA
AXH57973.1|4911237_4912401_+	M20 family peptidase	NA	NA	NA	NA	NA
AXH59297.1|4912539_4913517_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH57974.1|4913809_4914007_+	hypothetical protein	NA	NA	NA	NA	NA
AXH57975.1|4914422_4914647_+	hypothetical protein	NA	NA	NA	NA	NA
AXH57976.1|4914681_4916298_-	hybrid sensor histidine kinase/response regulator	NA	NA	NA	NA	NA
AXH57977.1|4916374_4917739_-	TolC family protein	NA	NA	NA	NA	NA
AXH57978.1|4917750_4919889_-	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	27.2	7.7e-32
AXH57979.1|4919885_4921142_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AXH59298.1|4921415_4922393_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH57980.1|4922604_4922829_+	hypothetical protein	NA	NA	NA	NA	NA
AXH57981.1|4922891_4923392_-	hypothetical protein	NA	NA	NA	NA	NA
AXH59299.1|4923982_4924960_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH57982.1|4925033_4927952_+	autotransporter domain-containing protein	NA	NA	NA	NA	NA
AXH57983.1|4927923_4928439_-	hypothetical protein	NA	NA	NA	NA	NA
AXH57984.1|4928558_4928930_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AXH57985.1|4929012_4929171_-	hypothetical protein	NA	NA	NA	NA	NA
AXH57986.1|4929531_4931616_+	calcium-binding protein	NA	NA	NA	NA	NA
AXH57987.1|4932205_4933066_+	ParA family protein	NA	NA	NA	NA	NA
AXH57988.1|4933123_4934470_+	replicative DNA helicase	NA	O80281	Escherichia_phage	48.9	1.6e-107
AXH57989.1|4934848_4935253_-	hypothetical protein	NA	NA	NA	NA	NA
AXH57990.1|4935496_4936183_+	hypothetical protein	NA	NA	NA	NA	NA
AXH57991.1|4937362_4937692_+	hypothetical protein	NA	NA	NA	NA	NA
AXH57992.1|4937693_4938098_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59300.1|4938094_4938340_+	hypothetical protein	NA	NA	NA	NA	NA
AXH57993.1|4938275_4938593_+	Arc family DNA-binding protein	NA	NA	NA	NA	NA
AXH57994.1|4938595_4940338_+	chromosome partitioning protein ParB	NA	NA	NA	NA	NA
AXH57995.1|4940374_4941112_+	DUF2857 domain-containing protein	NA	NA	NA	NA	NA
AXH57996.1|4941108_4942470_+	hypothetical protein	NA	NA	NA	NA	NA
AXH57997.1|4943275_4944055_+	TIGR03761 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH57998.1|4944051_4944615_+	DUF3158 family protein	NA	NA	NA	NA	NA
AXH57999.1|4944620_4945454_+	phage regulatory protein	NA	Q8HA97	Salmonella_phage	46.3	1.3e-22
AXH58000.1|4945465_4945927_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
AXH58001.1|4946256_4946544_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58002.1|4946640_4946820_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58003.1|4947257_4948826_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58004.1|4948828_4950781_+	DEAD/DEAH box helicase	NA	B3GAN0	uncultured_virus	28.6	5.7e-34
AXH58005.1|4951102_4951786_-	hypothetical protein	NA	NA	NA	NA	NA
AXH58006.1|4952329_4952899_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58007.1|4953021_4955043_+	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	29.2	7.5e-37
AXH58008.1|4955767_4955980_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58009.1|4956495_4957029_+	regulator	NA	NA	NA	NA	NA
AXH58010.1|4957236_4957584_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59301.1|4957710_4958688_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58011.1|4959448_4960018_+	DUF3577 domain-containing protein	NA	NA	NA	NA	NA
AXH58012.1|4960351_4960714_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58013.1|4960809_4961421_+	DUF3275 family protein	NA	NA	NA	NA	NA
AXH58014.1|4961509_4962034_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58015.1|4962100_4962700_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58016.1|4962730_4964182_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXH58017.1|4966270_4967797_-|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	50.7	5.0e-126
AXH59302.1|4969410_4970388_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58018.1|4970598_4971516_-	XamI family restriction endonuclease	NA	NA	NA	NA	NA
AXH58019.1|4971512_4973099_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AXH58020.1|4973095_4973284_-	plasmid-related protein	NA	NA	NA	NA	NA
AXH58021.1|4973505_4974546_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58022.1|4975153_4975858_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58023.1|4975866_4976613_+	TIGR03759 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58024.1|4977151_4977658_+	integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58025.1|4977669_4979829_+	conjugative coupling factor TraD, PFGI-1 class	NA	NA	NA	NA	NA
AXH58026.1|4979868_4980618_+	TIGR03747 family integrating conjugative element membrane protein	NA	NA	NA	NA	NA
AXH58027.1|4980627_4982085_+	ATP-dependent helicase	NA	A0A088C4M0	Shewanella_sp._phage	30.7	3.3e-42
AXH58028.1|4982107_4982539_-	hypothetical protein	NA	NA	NA	NA	NA
AXH58029.1|4982708_4983041_+	DUF4177 domain-containing protein	NA	NA	NA	NA	NA
AXH58030.1|4983120_4983486_+	conjugal transfer protein	NA	NA	NA	NA	NA
AXH58031.1|4983482_4983722_+	TIGR03758 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58032.1|4983741_4984110_+	TIGR03745 family integrating conjugative element membrane protein	NA	NA	NA	NA	NA
AXH58033.1|4984125_4984518_+	TIGR03750 family conjugal transfer protein	NA	NA	NA	NA	NA
AXH58034.1|4984514_4985183_+	TIGR03746 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58035.1|4985179_4986103_+	TIGR03749 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58036.1|4986092_4987589_+	TIGR03752 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58037.1|4987566_4988022_+	TIGR03751 family conjugal transfer lipoprotein	NA	NA	NA	NA	NA
AXH59303.1|4988231_4990979_+	conjugative transfer ATPase	NA	NA	NA	NA	NA
AXH58038.1|4990975_4991275_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58039.1|4991271_4991964_+	DsbA family protein	NA	NA	NA	NA	NA
AXH58040.1|4992538_4993546_+	type III secretion system YopJ family effector HopZ4	NA	NA	NA	NA	NA
AXH58041.1|4994121_4994595_+	TIGR03757 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58042.1|4994591_4995530_+	TIGR03756 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58043.1|4995550_4996918_+	integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58044.1|4996920_4997289_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59304.1|4998645_4999623_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58045.1|5000099_5000510_-	DUF3742 family protein	NA	NA	NA	NA	NA
AXH59305.1|5001090_5002068_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH59306.1|5004240_5005218_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH59307.1|5005683_5006661_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58046.1|5006780_5007017_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58047.1|5007264_5007975_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58048.1|5007983_5008730_+	TIGR03759 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58049.1|5008714_5009272_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
AXH58050.1|5009268_5009775_+	integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58051.1|5009786_5011946_+	conjugative coupling factor TraD, PFGI-1 class	NA	NA	NA	NA	NA
AXH58052.1|5011984_5012734_+	TIGR03747 family integrating conjugative element membrane protein	NA	NA	NA	NA	NA
AXH58053.1|5012743_5014180_+	ATP-dependent helicase	NA	A0A088C4M0	Shewanella_sp._phage	30.9	4.2e-42
AXH58054.1|5014345_5015590_-	serine kinase	NA	NA	NA	NA	NA
AXH58055.1|5015642_5016899_-	serine kinase	NA	NA	NA	NA	NA
AXH58056.1|5016985_5018086_-	amidinotransferase	NA	D5GV78	Campylobacter_virus	30.0	1.0e-35
AXH59308.1|5019029_5020217_-	MFS transporter	NA	NA	NA	NA	NA
AXH58057.1|5020791_5021124_+	DUF4177 domain-containing protein	NA	NA	NA	NA	NA
AXH58058.1|5021097_5021280_-	hypothetical protein	NA	NA	NA	NA	NA
AXH58059.1|5021203_5021566_+	conjugal transfer protein	NA	NA	NA	NA	NA
AXH58060.1|5021562_5021802_+	TIGR03758 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58061.1|5021821_5022187_+	TIGR03745 family integrating conjugative element membrane protein	NA	NA	NA	NA	NA
AXH58062.1|5022202_5022595_+	TIGR03750 family conjugal transfer protein	NA	NA	NA	NA	NA
AXH58063.1|5022591_5023260_+	TIGR03746 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58064.1|5023256_5024180_+	TIGR03749 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58065.1|5024169_5025654_+	TIGR03752 family integrating conjugative element protein	NA	NA	NA	NA	NA
AXH58066.1|5025631_5026087_+	TIGR03751 family conjugal transfer lipoprotein	NA	NA	NA	NA	NA
AXH58067.1|5026086_5027637_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	54.5	1.7e-118
>prophage 19
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	5521549	5563016	6075120	protease,transposase	Staphylococcus_phage(20.0%)	45	NA	NA
AXH59328.1|5521549_5522527_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH59329.1|5522762_5523740_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58467.1|5523906_5524329_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58468.1|5524383_5524569_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58469.1|5524714_5526259_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	49.2	6.4e-129
AXH58470.1|5526438_5527341_-	redox-regulated molecular chaperone Hsp33	NA	NA	NA	NA	NA
AXH58471.1|5527512_5527920_-	RNA-binding protein	NA	NA	NA	NA	NA
AXH59330.1|5528090_5528873_+	EAL domain-containing protein	NA	NA	NA	NA	NA
AXH58472.1|5528889_5529366_+|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
AXH58473.1|5529362_5530268_+	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D7SR78	Cyanophage	33.7	3.6e-39
AXH58474.1|5530724_5532056_+	glutamate/aspartate:proton symporter GltP	NA	NA	NA	NA	NA
AXH58475.1|5532147_5532423_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58476.1|5532640_5532889_+	TIGR02647 family protein	NA	NA	NA	NA	NA
AXH58477.1|5533072_5535919_+	class I adenylate cyclase	NA	NA	NA	NA	NA
AXH58478.1|5535984_5536119_+	DUF1534 domain-containing protein	NA	NA	NA	NA	NA
AXH58479.1|5536088_5536496_-	nucleoside diphosphate kinase regulator	NA	NA	NA	NA	NA
AXH58480.1|5536633_5536864_-	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
AXH58481.1|5536866_5537199_-	iron donor protein CyaY	NA	NA	NA	NA	NA
AXH58482.1|5537437_5537584_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58483.1|5537593_5538841_+	diaminopimelate decarboxylase	NA	NA	NA	NA	NA
AXH58484.1|5538845_5539676_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
AXH58485.1|5539689_5540424_+	DUF484 family protein	NA	NA	NA	NA	NA
AXH58486.1|5540426_5541326_+	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	34.5	7.0e-11
AXH58487.1|5541318_5542011_+	HAD family hydrolase	NA	NA	NA	NA	NA
AXH58488.1|5542085_5542415_-	hypothetical protein	NA	NA	NA	NA	NA
AXH59331.1|5542513_5542939_-	YjbQ family protein	NA	NA	NA	NA	NA
AXH59332.1|5542930_5543194_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58489.1|5543181_5544519_-	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	29.6	4.1e-31
AXH58490.1|5544552_5544891_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AXH58491.1|5545309_5545576_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58492.1|5545617_5546499_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXH58493.1|5546603_5547848_+	MFS transporter	NA	NA	NA	NA	NA
AXH59333.1|5549779_5550757_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58494.1|5551502_5553023_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	40.9	3.2e-32
AXH58495.1|5553047_5553920_+	phytanoyl-CoA dioxygenase family protein	NA	NA	NA	NA	NA
AXH58496.1|5553946_5554780_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXH58497.1|5554838_5555570_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59334.1|5555579_5555771_-	hypothetical protein	NA	NA	NA	NA	NA
AXH58498.1|5555696_5556992_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AXH58499.1|5557023_5557440_+	RidA family protein	NA	NA	NA	NA	NA
AXH58500.1|5557452_5558130_+	DUF1028 domain-containing protein	NA	NA	NA	NA	NA
AXH58501.1|5558126_5559281_+	acetylornithine deacetylase	NA	NA	NA	NA	NA
AXH58502.1|5559382_5560012_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59335.1|5560825_5561803_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH59336.1|5562038_5563016_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 20
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	5663214	5776979	6075120	protease,plate,bacteriocin,transposase	Escherichia_phage(15.79%)	105	NA	NA
AXH59348.1|5663214_5664192_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58589.1|5664420_5665071_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58590.1|5665193_5666726_-	SulP family inorganic anion transporter	NA	NA	NA	NA	NA
AXH58591.1|5666830_5667571_-	carbonic anhydrase	NA	NA	NA	NA	NA
AXH58592.1|5667776_5668835_-	radical SAM protein	NA	NA	NA	NA	NA
AXH58593.1|5668958_5669627_-	isoprenoid biosynthesis protein ElbB	NA	NA	NA	NA	NA
AXH58594.1|5669834_5670497_-	DedA family protein	NA	NA	NA	NA	NA
AXH58595.1|5670728_5671739_+	porphobilinogen synthase	NA	NA	NA	NA	NA
AXH58596.1|5671755_5673966_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
AXH58597.1|5673952_5675455_-	exopolyphosphatase	NA	NA	NA	NA	NA
AXH58598.1|5675860_5676595_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.2	1.5e-32
AXH58599.1|5676581_5677229_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXH58600.1|5677228_5677894_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AXH58601.1|5677923_5678709_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXH58602.1|5678958_5679663_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AXH59349.1|5679784_5680114_+	thioredoxin TrxA	NA	A0A1V0SD63	Indivirus	41.7	4.6e-13
AXH58603.1|5680345_5681605_+	transcription termination factor Rho	NA	NA	NA	NA	NA
AXH59350.1|5681733_5683200_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
AXH58604.1|5683199_5684168_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
AXH58605.1|5684376_5685045_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AXH58606.1|5685057_5686407_-	glycerol-3-phosphate transporter	NA	NA	NA	NA	NA
AXH58607.1|5687343_5687979_+	energy transducer TonB	NA	NA	NA	NA	NA
AXH58608.1|5688269_5688659_-	hypothetical protein	NA	NA	NA	NA	NA
AXH58609.1|5689057_5689849_-	hypothetical protein	NA	NA	NA	NA	NA
AXH58610.1|5689897_5690167_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AXH58611.1|5690347_5690620_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AXH58612.1|5690616_5690928_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
AXH59351.1|5691222_5692200_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58613.1|5692326_5693283_-	RHS repeat-associated core domain-containing protein	NA	A0A1W5K0N1	Bacteriophage	39.4	6.1e-29
AXH58614.1|5693353_5694304_-	RHS repeat-associated core domain-containing protein	NA	A0A1W5K0N1	Bacteriophage	45.1	2.8e-34
AXH59352.1|5694415_5694631_-	hypothetical protein	NA	NA	NA	NA	NA
AXH58615.1|5694881_5695100_-	DUF1534 domain-containing protein	NA	NA	NA	NA	NA
AXH58616.1|5695116_5696136_-	sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXH58617.1|5696174_5697041_-	ABC transporter permease	NA	NA	NA	NA	NA
AXH58618.1|5697131_5698013_-	ABC transporter ATP-binding protein	NA	A0A076FI99	Aureococcus_anophage	25.0	1.5e-05
AXH58619.1|5698029_5698926_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
AXH59353.1|5699283_5702244_+	autotransporter domain-containing protein	NA	NA	NA	NA	NA
AXH58620.1|5702358_5703585_-	MFS transporter	NA	NA	NA	NA	NA
AXH58621.1|5703701_5704964_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
AXH58622.1|5705125_5705908_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AXH58623.1|5706078_5707029_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AXH58624.1|5707109_5707691_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AXH58625.1|5707905_5709216_-	MFS transporter	NA	NA	NA	NA	NA
AXH58626.1|5709823_5710816_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AXH58627.1|5710981_5712220_-	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	NA	NA	NA	NA	NA
AXH58628.1|5712271_5713459_-	2-octaprenyl-6-methoxyphenyl hydroxylase	NA	NA	NA	NA	NA
AXH58629.1|5713455_5714790_-	Xaa-Pro aminopeptidase	NA	NA	NA	NA	NA
AXH58630.1|5714865_5715420_-	hypothetical protein	NA	NA	NA	NA	NA
AXH58631.1|5715570_5715780_+	TIGR02449 family protein	NA	NA	NA	NA	NA
AXH58632.1|5715776_5716106_+	cell division protein ZapA	NA	NA	NA	NA	NA
AXH58633.1|5716409_5717021_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
AXH58634.1|5717066_5717219_-	hypothetical protein	NA	NA	NA	NA	NA
AXH59354.1|5717321_5718299_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH59355.1|5718704_5719433_-	hypothetical protein	NA	NA	NA	NA	NA
AXH59356.1|5720558_5721536_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58635.1|5721864_5722968_-|transposase	IS5-like element ISPsy19 family transposase	transposase	NA	NA	NA	NA
AXH59357.1|5723174_5724152_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58636.1|5724615_5724951_-	hypothetical protein	NA	A0A0U4IBV2	Pseudomonas_phage	64.0	6.0e-24
AXH58637.1|5724923_5725634_-	hypothetical protein	NA	A0A2I7RNK1	Vibrio_phage	38.2	1.3e-36
AXH58638.1|5725873_5726809_+|protease	YopT-type cysteine protease domain-containing protein	protease	NA	NA	NA	NA
AXH58639.1|5727212_5727611_-	transcriptional regulator	NA	NA	NA	NA	NA
AXH58640.1|5727735_5728482_+	NADP oxidoreductase	NA	NA	NA	NA	NA
AXH58641.1|5728917_5729940_+|transposase	IS21-like element ISPsy4 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	46.1	1.7e-77
AXH58642.1|5729936_5730746_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	62.0	1.3e-77
AXH59358.1|5732746_5733724_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH59359.1|5733975_5734506_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58643.1|5734735_5735350_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
AXH58644.1|5735453_5735795_-	hypothetical protein	NA	NA	NA	NA	NA
AXH58645.1|5735984_5736407_+	DUF1493 family protein	NA	NA	NA	NA	NA
AXH58646.1|5736958_5738044_+	restriction endonuclease	NA	A0A1S5SAB0	Streptococcus_phage	39.9	2.6e-68
AXH58647.1|5738177_5738915_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58648.1|5738821_5739202_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	84.1	2.3e-32
AXH58649.1|5739191_5739431_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	81.0	5.7e-29
AXH58650.1|5739594_5740068_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AXH58651.1|5740168_5740717_-	N-acetyltransferase	NA	NA	NA	NA	NA
AXH58652.1|5740840_5741371_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58653.1|5741404_5742679_-	outer membrane porin, OprD family	NA	NA	NA	NA	NA
AXH58654.1|5742893_5743127_-	hypothetical protein	NA	NA	NA	NA	NA
AXH58655.1|5743350_5744457_-	agmatine deiminase	NA	A7IVE6	Paramecium_bursaria_Chlorella_virus	50.6	2.7e-105
AXH58656.1|5744462_5745341_-	N-carbamoylputrescine amidase	NA	A7IVZ1	Paramecium_bursaria_Chlorella_virus	48.1	6.1e-76
AXH58657.1|5745505_5745601_-	DUF1534 domain-containing protein	NA	NA	NA	NA	NA
AXH58658.1|5745765_5748678_-	aminotransferase	NA	A0A1V0SKB7	Klosneuvirus	24.3	1.0e-18
AXH58659.1|5748918_5750001_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.6	1.4e-98
AXH58660.1|5750081_5750627_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	58.0	2.6e-53
AXH58661.1|5750791_5752609_+	sensor histidine kinase	NA	NA	NA	NA	NA
AXH58662.1|5752605_5753991_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AXH58663.1|5753977_5754451_+	thioesterase	NA	NA	NA	NA	NA
AXH58664.1|5754826_5755669_-	3'(2'),5'-bisphosphate nucleotidase	NA	NA	NA	NA	NA
AXH58665.1|5755665_5756232_-	ADP compounds hydrolase NudE	NA	NA	NA	NA	NA
AXH58666.1|5756328_5756985_+	GMP/IMP nucleotidase	NA	NA	NA	NA	NA
AXH58667.1|5757026_5757908_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AXH58668.1|5758011_5758848_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA	NA
AXH58669.1|5758844_5761181_+	CbbBc protein	NA	NA	NA	NA	NA
AXH58670.1|5761390_5761852_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58671.1|5761910_5763839_-	RecQ family ATP-dependent DNA helicase	NA	F2NZ48	Diadromus_pulchellus_ascovirus	40.7	7.6e-55
AXH58672.1|5764014_5764836_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58673.1|5766000_5766750_+	hypothetical protein	NA	NA	NA	NA	NA
AXH58674.1|5766818_5767352_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
AXH58675.1|5767366_5768869_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
AXH58676.1|5768900_5769383_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
AXH58677.1|5769379_5771215_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
AXH58678.1|5771178_5772249_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
AXH58679.1|5772245_5774849_+	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	28.6	1.7e-89
AXH58680.1|5774928_5775639_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
AXH58681.1|5775635_5776979_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 21
CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	6075120	5968460	6027542	6075120	holin,tRNA,transposase	Rhizobium_phage(16.67%)	42	NA	NA
AXH59371.1|5968460_5970353_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AXH58835.1|5970929_5972300_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	tRNA	NA	NA	NA	NA
AXH58836.1|5972378_5974070_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
AXH58837.1|5974072_5974318_-	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA	NA
AXH58838.1|5974310_5974712_-	ribonuclease P protein component	NA	NA	NA	NA	NA
AXH58839.1|5974728_5974863_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
AXH58840.1|5975446_5976982_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
AXH58841.1|5977020_5978124_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	36.8	7.9e-57
AXH58842.1|5978146_5979250_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
AXH58843.1|5979254_5981672_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	35.2	1.3e-115
AXH58844.1|5982305_5985842_+	DUF3883 domain-containing protein	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	26.4	5.7e-56
AXH58845.1|5985999_5986620_+	NYN domain-containing protein	NA	NA	NA	NA	NA
AXH58846.1|5986629_5987937_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
AXH59372.1|5987976_5988954_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58847.1|5989160_5990264_+|transposase	IS5-like element ISPsy19 family transposase	transposase	NA	NA	NA	NA
AXH59373.1|5991647_5992625_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58848.1|5993850_5994099_+	hypothetical protein	NA	NA	NA	NA	NA
AXH59374.1|5994469_5995447_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
AXH58849.1|5997404_5997980_+	recombinase family protein	NA	A0JC18	Ralstonia_phage	36.9	3.0e-23
AXH58850.1|6000988_6001702_+	YecA family protein	NA	NA	NA	NA	NA
AXH58851.1|6001778_6003104_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AXH58852.1|6003691_6004462_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AXH59375.1|6004519_6005071_-	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
AXH58853.1|6005084_6007139_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AXH59376.1|6007135_6008083_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AXH58854.1|6008163_6008715_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AXH58855.1|6008753_6009641_+	lysophospholipid acyltransferase	NA	NA	NA	NA	NA
AXH58856.1|6010201_6012565_-	formate dehydrogenase	NA	NA	NA	NA	NA
AXH58857.1|6012719_6014093_-	Trk system potassium transporter TrkA	NA	NA	NA	NA	NA
AXH58858.1|6014089_6015436_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
AXH58859.1|6015432_6016377_-|tRNA	methionyl-tRNA formyltransferase	tRNA	NA	NA	NA	NA
AXH58860.1|6016436_6016943_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.3	5.1e-19
AXH58861.1|6017068_6018094_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
AXH58862.1|6018217_6019336_+	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	38.1	1.1e-26
AXH58863.1|6019374_6019932_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
AXH58864.1|6019939_6020917_-	NADPH:quinone reductase	NA	NA	NA	NA	NA
AXH59377.1|6021010_6021295_-	DUF3630 family protein	NA	NA	NA	NA	NA
AXH58865.1|6021526_6022441_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
AXH58866.1|6022440_6023265_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
AXH58867.1|6023326_6024895_-	SulP family inorganic anion transporter	NA	NA	NA	NA	NA
AXH58868.1|6025072_6025999_-|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
AXH58869.1|6026036_6027542_-|holin	choline-sulfatase	holin	NA	NA	NA	NA
>prophage 1
CP031226	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence	971889	57625	66170	971889		Ralstonia_phage(16.67%)	8	NA	NA
AXH59432.1|57625_58423_-	serine/threonine protein phosphatase	NA	A0A120MVX3	Ralstonia_phage	28.2	2.0e-09
AXH59433.1|58531_59353_+	EAL domain-containing protein	NA	NA	NA	NA	NA
AXH59434.1|59366_59792_-	hypothetical protein	NA	G3KB11	Pseudomonas_phage	44.2	6.8e-25
AXH59435.1|59794_62416_-	DNA topoisomerase III	NA	A0A0N9R437	Chrysochromulina_ericina_virus	29.0	1.6e-07
AXH59436.1|62412_63153_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
AXH59437.1|63137_63611_-	DUF1064 domain-containing protein	NA	B8Q5A6	Abalone_shriveling_syndrome-associated_virus	43.0	2.5e-12
AXH59438.1|63614_63884_-	hypothetical protein	NA	M4SM17	Vibrio_phage	40.0	2.6e-06
AXH59439.1|64067_66170_+	ATP-dependent helicase	NA	A7KV33	Bacillus_phage	28.9	8.5e-68
>prophage 1
CP031227	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pPla107-1, complete sequence	62136	38762	55205	62136	transposase	Escherichia_phage(33.33%)	14	NA	NA
AXH60455.1|38762_41789_-|transposase	Tn3-like element ISPsy30 family transposase	transposase	NA	NA	NA	NA
AXH60456.1|41778_42375_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	50.3	1.2e-40
AXH60457.1|42691_43534_-	type III effector	NA	NA	NA	NA	NA
AXH60458.1|44167_45694_-|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	50.7	5.0e-126
AXH60459.1|45755_45914_-	hypothetical protein	NA	NA	NA	NA	NA
AXH60460.1|45961_46771_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	62.0	1.3e-77
AXH60461.1|46767_47790_-|transposase	IS21-like element ISPsy4 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	46.1	1.7e-77
AXH60462.1|47858_48059_-	hypothetical protein	NA	NA	NA	NA	NA
AXH60463.1|48055_48388_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
AXH60464.1|48695_49448_+	hypothetical protein	NA	NA	NA	NA	NA
AXH60475.1|49582_50560_-|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	57.9	4.1e-97
AXH60465.1|50708_51812_+|transposase	IS5-like element ISPsy19 family transposase	transposase	NA	NA	NA	NA
AXH60476.1|51977_52955_-|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	57.9	4.1e-97
AXH60466.1|53975_55205_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
