assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_000146005.2_ASM14600v2	CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	1	185035-185114	1	CRISPRCasFinder	no		csa3,DEDDh,RT,cas3,DinG,PD-DExK	Orphan	GATCTCAACTATCGTGCGACGCTC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,RT,cas3,DinG,PD-DExK,cas14j,cas3f,cas6f,cas7f,WYL	NA,NA|147aa|down_5|CP031225.1_191177_191618_-	NA|366aa|up_9|CP031225.1_173855_174953_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|456aa|up_8|CP031225.1_175093_176461_-	PRK07480, PRK07480, putative aminotransferase; Validated	NA|453aa|up_7|CP031225.1_176530_177889_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|459aa|up_6|CP031225.1_178482_179859_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|221aa|up_5|CP031225.1_180048_180711_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|349aa|up_4|CP031225.1_180717_181764_-	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|72aa|up_3|CP031225.1_181897_182113_-	COG3585, MopI, Molybdopterin-binding protein [Coenzyme metabolism]	NA|271aa|up_2|CP031225.1_182139_182952_-	PRK11247, ssuB, aliphatic sulfonates transport ATP-binding subunit; Provisional	NA|266aa|up_1|CP031225.1_182948_183746_-	PRK11365, ssuC, aliphatic sulfonate ABC transporter permease SsuC	NA|322aa|up_0|CP031225.1_183774_184740_-	cd13557, PBP2_SsuA, Substrate binding domain of sulfonate binding protein, a member of the type 2 periplasmic binding fold superfamily	NA|213aa|down_0|CP031225.1_185243_185882_-	cd03016, PRX_1cys, Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine	NA|449aa|down_1|CP031225.1_186051_187398_-	pfam03573, OprD, outer membrane porin, OprD family	NA|326aa|down_2|CP031225.1_188169_189147_+	COG4521, TauA, ABC-type taurine transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|262aa|down_3|CP031225.1_189172_189958_+	PRK11248, tauB, taurine ABC transporter ATP-binding subunit	NA|292aa|down_4|CP031225.1_189954_190830_+	PRK10160, PRK10160, taurine ABC transporter permease TauC	NA|147aa|down_5|CP031225.1_191177_191618_-	NA	NA|152aa|down_6|CP031225.1_191616_192072_+	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|163aa|down_7|CP031225.1_192141_192630_-	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated	NA|84aa|down_8|CP031225.1_192670_192922_-	TIGR02181, GRX_bact, Glutaredoxin, GrxC family	NA|138aa|down_9|CP031225.1_192924_193338_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein
GCA_000146005.2_ASM14600v2	CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	2	4324084-4324172	2	CRISPRCasFinder	no		csa3,DEDDh,RT,cas3,DinG,PD-DExK	Orphan	CCTGTAGGAGCGGACTTGTCCGCGAAGAGG	30	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,RT,cas3,DinG,PD-DExK,cas14j,cas3f,cas6f,cas7f,WYL	NA|117aa|up_9|CP031225.1_4313730_4314081_-,NA|65aa|up_6|CP031225.1_4315840_4316035_-,NA|73aa|up_5|CP031225.1_4316222_4316441_-,NA	NA|117aa|up_9|CP031225.1_4313730_4314081_-	NA	NA|263aa|up_8|CP031225.1_4314253_4315042_+	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|178aa|up_7|CP031225.1_4315109_4315643_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|65aa|up_6|CP031225.1_4315840_4316035_-	NA	NA|73aa|up_5|CP031225.1_4316222_4316441_-	NA	NA|245aa|up_4|CP031225.1_4316580_4317315_+	COG2977, EntD, Phosphopantetheinyl transferase component of siderophore synthetase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|253aa|up_3|CP031225.1_4317315_4318074_-	TIGR03951, Fe_III_red_FhuF, siderophore-iron reductase FhuF	NA|537aa|up_2|CP031225.1_4318031_4319642_-	PRK10604, PRK10604, sensor protein RstB; Provisional	NA|248aa|up_1|CP031225.1_4319646_4320390_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|971aa|up_0|CP031225.1_4321099_4324012_+	PRK07207, PRK07207, ribonucleoside-diphosphate reductase subunit alpha	NA|416aa|down_0|CP031225.1_4324335_4325583_+	PRK07209, PRK07209, ribonucleotide-diphosphate reductase subunit beta; Validated	NA|326aa|down_1|CP031225.1_4326331_4327309_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|326aa|down_2|CP031225.1_4328932_4329910_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|522aa|down_3|CP031225.1_4330711_4332277_-	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|117aa|down_4|CP031225.1_4332527_4332878_+	PRK06599, PRK06599, DNA topoisomerase I; Validated	NA|736aa|down_5|CP031225.1_4332917_4335125_-	COG3170, FimV, Tfp pilus assembly protein FimV [Cell motility and secretion / Intracellular trafficking and secretion]	NA|145aa|down_6|CP031225.1_4335220_4335655_-	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional	NA|710aa|down_7|CP031225.1_4335748_4337878_-	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|196aa|down_8|CP031225.1_4338054_4338642_+	COG3318, COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA [General function prediction only]	NA|135aa|down_9|CP031225.1_4338652_4339057_+	pfam04304, DUF454, Protein of unknown function (DUF454)
GCA_000146005.2_ASM14600v2	CP031225	Pseudomonas amygdali pv. lachrymans str. M301315 chromosome, complete genome	3	4942524-4943153	1	CRT	no		csa3,DEDDh,RT,cas3,DinG,PD-DExK	Orphan	GTTGCNCCGGGCAACACT	18	2	7	4942614-4942631|4943118-4943135|4943118-4943135|4943118-4943135|4943118-4943135|4943118-4943135|4943118-4943135	CP031226.1_200871-200888|CP031225.1_2264844-2264827|CP031225.1_2265132-2265115|CP031225.1_2265600-2265583|CP031225.1_2265888-2265871|CP031225.1_2265348-2265331|CP031225.1_2265672-2265655	NA	17	17	Orphan	csa3,DEDDh,RT,cas3,DinG,PD-DExK,cas14j,cas3f,cas6f,cas7f,WYL	NA|135aa|up_8|CP031225.1_4934848_4935253_-,NA|229aa|up_7|CP031225.1_4935496_4936183_+,NA|110aa|up_6|CP031225.1_4937362_4937692_+,NA|135aa|up_5|CP031225.1_4937693_4938098_+,NA|82aa|up_4|CP031225.1_4938094_4938340_+,NA|454aa|up_0|CP031225.1_4941108_4942470_+,NA|96aa|down_4|CP031225.1_4946256_4946544_+,NA|60aa|down_5|CP031225.1_4946640_4946820_+,NA|523aa|down_6|CP031225.1_4947257_4948826_+	NA|449aa|up_9|CP031225.1_4933123_4934470_+	TIGR00665, DnaB, replicative DNA helicase	NA|135aa|up_8|CP031225.1_4934848_4935253_-	NA	NA|229aa|up_7|CP031225.1_4935496_4936183_+	NA	NA|110aa|up_6|CP031225.1_4937362_4937692_+	NA	NA|135aa|up_5|CP031225.1_4937693_4938098_+	NA	NA|82aa|up_4|CP031225.1_4938094_4938340_+	NA	NA|106aa|up_3|CP031225.1_4938275_4938593_+	pfam03869, Arc, Arc-like DNA binding domain	NA|581aa|up_2|CP031225.1_4938595_4940338_+	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein	NA|246aa|up_1|CP031225.1_4940374_4941112_+	pfam11198, DUF2857, Protein of unknown function (DUF2857)	NA|454aa|up_0|CP031225.1_4941108_4942470_+	NA	NA|260aa|down_0|CP031225.1_4943275_4944055_+	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family	NA|188aa|down_1|CP031225.1_4944051_4944615_+	pfam11358, DUF3158, Protein of unknown function (DUF3158)	NA|278aa|down_2|CP031225.1_4944620_4945454_+	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha)	NA|154aa|down_3|CP031225.1_4945465_4945927_+	PRK08182, PRK08182, single-stranded DNA-binding protein; Provisional	NA|96aa|down_4|CP031225.1_4946256_4946544_+	NA	NA|60aa|down_5|CP031225.1_4946640_4946820_+	NA	NA|523aa|down_6|CP031225.1_4947257_4948826_+	NA	NA|651aa|down_7|CP031225.1_4948828_4950781_+	cd17919, DEXHc_Snf, DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins	NA|228aa|down_8|CP031225.1_4951102_4951786_-	pfam18735, HEPN_RiboL-PSP, RiboL-PSP-HEPN	NA|190aa|down_9|CP031225.1_4952329_4952899_+	TIGR03748, conj_PilL, conjugative transfer region protein, TIGR03748 family
